TCONS_00060878 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060878
Unique NameTCONS_00060878
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2697

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060878 ID=TCONS_00060878|Name=TCONS_00060878|organism=Clytia hemisphaerica|type=transcript|length=2697bp
GGAATGAAGGAATCCTTTTTTTCGAACATGTATGAAAGCTTGAAAACAAG
TGGTATTTCTGTCACACACATGTGTAGAGAAAGAGatcaattttaaagaa
taaaatattttaataaaacagCATTTTAAAGCATATAGATCGAACTCATG
TGAAATTTTTAACACCGGAATTAAATTTTTGTAGTCGAATATTGTTTTTT
CGGCGGGTGTTTACAGTCGTCAATATAAGCCTTAAACGAGTTATTATAAA
CCATACCGAGTTAGTAACTCGTTTTAAGGATAATTAATTATTCGGAACAA
TCCGATATAACTCGACATGAGAACATTCGCGAGTGGACCTTCTCACCCGG
TTGTCGAGAAAAGAATGCAAATACAATTCgacttgaatttgaatgaaatc
gGTGCAAAGACATTTGTTCATGAGCAAATTCACAGATCTTCAATGTTGAT
TCATATTAAAAAAAGACAGATGAGCATGCTTTCAACTTCTGAAATTTCCG
AAGACGAGTTGGAGAACAGTGACAACGATTCCGTTGATGACGAAGAACTC
ATCCGATTGGTCGATCAAGCAGCCAATGAGGAAACAGGATCAATCACAGA
TGAACCAATCACAGTCGAGGAAAAAATCTTGGATGTCGAAACCGTACCAC
GTGGTCCAGGAGTTGGCGCAGATACATCCAGTGAATCGGGAGCGAGTGTT
GGAGATGTATCGAGTGAACCCGATGAGATGTTTAAACTTGTTTTGGCGGG
AAATGCGGCCGTTGGAAAATCAAGTTTCATTCTGAGACTTTGCAAGAATA
AATTTTATTCAGCTCTGAACGCAACGTTAGGCGTCGACTTCCAAATGAAA
CGCATGATTGTCGATAAAAAGAAAATCGCTTTACAATGCTGGGACACGGC
TGGACAGGAGAGGTTTCGGAGTATTGCCAAAAGCTACTTCCGACGTGTAG
ATGGGGTCGTACTGTTGTATGACGTCACATGTGAGAATTCGTTCCTGGAT
GTCAGAGAATGGATAGAATCGATTGAGAGCTCGTCTGATAACGTACCGGT
CATCTTGTGTGGGAATAAAGTCGACTTGCGTCCTGATGCTGAGCGAATTG
GTATGCCAGTGATTAGCCGAGACCAGGGCCAACAGCTTGCCAAAGACGTT
GGTGCGTTATTCATTGAAACTTCAGCTAAAGAGGGAACCAATATTCATCG
AGCTTGCAAGGATCTCATAAGGATGATGCAGCGTAATGAGAATCCGAAAC
CTCACCCGAACGGAACAGTTCAACTCGATCCTGAATccgaaaaaccaaaa
aaagctGGTTGTTGTGGCAAAAGTTGAAAAGTCTTTTGATGAAAGTTTCC
ATCATTATGGATGCGATCAACAGATTGCGTAGAGAAAAAGGAGAATGATT
CGCCGATCCCAGGGCCATTCCGATTTGATGACTGATTCGTATGGTTCGAA
TGGATATGGTCAGGTCAACTTCGGTACTAGTCCAACGTTTACGAAGAAAA
CGTCTGGAAATTCCCTATGACGAGAACTCGTCAACGTACACCCTGGAATG
CACGAGTGTGTCGCCCTGGAAGATTTGAGCTTTAAAGTTAAAAACCATCT
CACTTAACTGACATTACCATCTTCGCCTAGCCCTGTCCATCCACAGACCA
GGACGAAGATATTCGGTTACAATCAACTAAATGGACGCAAGACTCAAGAC
TCAAGAATCAAAACACAAGACTCAAGATCCAAGACTCAAGATTCAAGACA
CaatagattttaaatttaaagacAATTTTTAGAGTGGTAAAATCTTAAGT
ATTTATATTAACAGCAGAAAATGAATGATTTTGGGGAATTTTATTTATGT
TAAGTAATAAAACCCATTAAATTAGGATGTATTCCCAAAAGCTGACAGTA
TTAGGGTTTGGTTTAATTTGTCAGACATTTTACAGACATTTTACAGGTGT
GATAGACCCTCGACATATCTATCAATACGTTAAGTTCCTTAAAAAGCTTG
CAGGGGGGAGGGGAATGATTTTGAGAGACTTCTAAAGTTACTAATGGATT
TCTAAATAGAAAATCCTACAATATGGCCCAACTAATCTAGTTTTCTAAAC
CTCTTCCAGTCAGCTAGTACAAAATTTTAAAGCAACGTTAAATGGATGTT
GAAACTACGCAGTGTCGTAGCTACCGGGGGGCTAGAGGGTGCTTatcccc
cccccaataattctCTTAATGAAATGGAGTATTTTACCTTTAAATTTTGC
CtttattcgaattattttagttttttgagtgTGTTCTTGGCCAATTTAGA
Gctctagatttcaaaatttcccccatcatgccaaaccatggttggccctc
acgGTGTCACTGAACTTATGCCCCTTCCCCCAATATCAATATGCCTCCTA
CGGCACTGCTACGTTGTAAGTCAGCTGGGTTTTGTGCATTCATTATCATA
CATCgagaaaatcttttcttttcttttcttattttgttttgtttttcatc
tatttttgttttcttcatgTAAATAGTTTATTTGTCATatcaagatttga
aaaaattaaaaactattaTTGTACAAAGattcatatatttaaaaatAGTT
TCAGAATATAAACTATGAAAAATAACTAATTGTAATTTTTACGTTTATGA
GCTCATAGTACTATGATGagctacacttttttttaagtACAACGAGG
Run BLAST on NCBI

transcript from alignment at scaffold_349:680658..688971-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060878 ID=TCONS_00060878|Name=TCONS_00060878|organism=Clytia hemisphaerica|type=transcript|length=8314bp|location=Sequence derived from alignment at scaffold_349:680658..688971- (Clytia hemisphaerica)
GGAATGAAGGAATCCTTTTTTTCGAACATGTATGAAAGCTTGAAAACAAG
TGGTATTTCTGTCACACACATGTGTAGAGAAAGAGATCAATTTTAAAGAA
TAAAATATTTTAATAAAACAGCATTTTAAAGCATATAGATCGAACTCATG
TGAAATTTTTAACACCGGAATTAAATTTTTGTAGTCGAATATTGTTTTTT
CGGCGGGTGTTTACAGTCGTCAATATAAGCCTTAAACGAGTTATTATAAA
CCATACCGAGTTAGTAACTCGTTTTAAGGATAATTAATTATTCGGAACAA
TCCGATATAACTCGACATGAGAACATTCGCGAGTGGACCTTCTCACCCGG
TTGTCGAGAAAAGAATGCAAATACAATTCGACTTGAATTTGAATGAAATC
GGTGCAAAGACATTTGTTCATGAGCAAATTCACAGATCTTCAATGTTGAT
TCATATTAAAAAAAGACAGGTAAAATACTGAGATTGCTCTTTCAAATTTG
AAGAAAAAATTACAGAAAATTCAAAGAAATATTTTGGAATGTAACGGGTT
AACTTACAAGATGAGAATTTTCTTGGAAGCTTTGGTAGTCTGACAGGTAA
AATAGTGAGATTGCTCTTTCAAATTTTGAGAAAAAACCTACAAATTCAAT
GTAATATTTTGGTGTTTAGCAGGTGTTAATGTATTTATAAAATGAGAGTT
CTCATGGAAGCTTAGACAGTCTGACAGGTAAAATAGTGAGATCTCCTCTC
AATGAAATCCTCAATGAAATATTTTGCTAGGTAACAGGGGCTAAAAGAGC
CTGGTTAAATCTCTTCAGCGATTTGATGTAACTATTTGATTATTTAATTG
TTGTTAATATAATTTGTTTAATGTACAGAAAAGTTAGCAGAAAGGGAGTT
TTGATTTTTCACTTAACCCAGGTCATACAAGTTTCTGTGACTTGCAAAAT
GACCTGAGTTTGAATCTCCAATCTTGAAGAAAAAGAGAAAAATGTGACCT
CCAAATTCTTGCATCAGAACAAAGCCGACTATTACTTATTTCCACAAAAG
CAGATTTTAAGTCTTACGTCTGAATAGAGCTTTAAAGAAGATTAAAAGTT
TACTTTTAGAAGATATTTTAAACCTTGTAAATAACATTTTATCTAACTAA
ACTTTTGTTATATAACAATGCAAGCAAATCAACAAACAATTAAATCTAAC
TTCTTAAACCTTAAATTTAAATTTAAAACATTTTTAGCAAAGTGACACAT
CGACTGCTGAAGACACAACAACAAACGTGGTTTCAAACGATGACCAAACA
CTCGCTCAAACAAAGGAAACATCAAGCTTTTGTACCACTTGCGATGGTGA
TACAAAATCAGGCCTCACGAACTGCCCAACCTGTGGTGAGGGTGACGCGC
CCGAAGATACCGCCCATATTTTAGAAAACGTTTCATGGGATGAAACCCCG
CCCTTTTCTTTACGCCCAGATACGCCCATAAGTGGGCGCGATCGTAAAAA
CTCCGTCCTGAGCAACCAAAGTAACCAAAGTCCGTCAACATCTAAAATAC
CAACACCAAGATCTATGAACAGCCCACGATTCCGAAGTGGCACCTTAAAG
TCATCGCCCAGAACCCCTTTAAGATCTGGCCGTAGTAGTTTACAGAACTC
TCCTAGAGTCGAAGACCCTTTGAAACCATTTGGAAGTGGTAGTTCAAAGT
CATCGCCCAGAACACCTCTAAGATCTGGCCGCAGTAGTTTAAAGAACTCT
CCCAGAATCGAAGATCCTATAAGAGCTATACGTGAAAACAACCTCGAAAG
TGGTTTGAGACCATTACTTCAAGAAGAAGACCTTATAGAACCGTCAGAAA
TTGCTTTAGACGAAAGTTCTGCACCTGAAACCACCACGGATGATTTTTTC
CGGAAACTTGAAGATATCCCACCAAGTGTTTGCGAAACTTGTGATCAAAC
AATACAAGTCGATTTTACCGGTACCGAACAATGCCAATGCACGTTGAATG
AGCGAGACAGGTTATTAGATACTTTGCTTACTGATTCAGACTCGGATGAT
AGTTATACTGAACAAGAAACAAGTCATTTGGGAATTAGACATCGAGTCCA
AAAACCACCTCTCTCTTCTGATAATCAGGTACTAATTAAAATACGTCATT
TTAAACATTAAACATTTTAAAGTTTTCTAAACAAACTTATAAATGGCAAG
AGAGGTTTCTTTCTTTCTTGTTTTTTTTTTACAAAATCTGATTCCTCACA
ACGACGACAGAGTATGTAGAGATCGCACTCCTAGAAGAAACCGAGTTCCC
AAAACATACAAGACCTTTTTACAGCTTCGATTCCTTAAACTAATCAAAAG
AATTTAAACTCTCTTAACATAGACAACATAAGTTCCTTAATGAGTTTCGA
TGATGCTCTCTATTCAACTCGAACAAGTTTTTAGGTCCCTTCTGTTAACA
ATGTCTTGTACTCTATGTACTCCATAACTCGAATTTCCTTAATTCGAACA
AATTTGCATTTCCCATACGCATTCGAGTTTTAGAGACTCAGCTGTATTAA
AACTTAACATTAAAACACTCGCTTGCAATGTACCGGGTGCGCCACAAAAA
AGTTTCTCTCTTTAAAACTAATTTTCTCGAAATCTAAAAGTTTTAAAAGA
ACCATTCCTATTTCATTGCAAAGAAGAAAGATAAACTTAAATTTTGATGG
GTCATTTATTAGATTCGATTCATTAGATCAAAAGTTATGCTCAATTGAAT
AAAAAAGTTACTTTTGGAAAATGCTCAAAAACGTTAAAAATCGACCTATC
AAATTAAACAGAAGCATAATTACATGATATATCAGTATTTTCGTTTCATT
CATTAAAAATGATAATTAGCTGTCTAAATGACCTTTTGTTATTTAAAGGA
AGGTTTAATTTCAATGAAAGGAAGAAAATTTGTCAAAAAAGGCCAGATAA
TCTGGTAAAATTCATAAAAATACATCAAATATGGGTTTCGAGGTAGATCC
AGCCTTACATAGACTTTATCCAGACTAGAACCAAAAATCTGAGGAAAATT
TCAGTAAAACTAAATCAAATTGATTTTGATGACGATTTTAAACCCTTTCG
GCCCTTCAATTTCAAAATTTATGTGTTATGTTACTGAAAAATGCTCTTAA
TCGTGTAAAGGCTATTGCAATTGCCAAATTTAGAGTAAAAATTTGATAGG
TCGATTTTTAACGTTTTCGAGCTCTTTCTGAAAGTAACTTTTTTATTCAA
TTGAGTATAATTTTTGATCTAATGAATCGAATTTAATAAATGACCCATCA
AAATTTAAGTTTTTCTTTCTTCTTTCAACTGACATAGGTGTGGTTCTTTT
AAAAATTTTAGATTTCGAGAAAATTAGTTTCAAAGAGAGAAACTTTTTTG
TGGCGCACCCGGTATTATAATCTATAACTCGAACAAATTCTGTTAACAAT
GCCTTATAAACTTTACTCCGTCGCTCGAAATCTCCTTAATTCGAACTTCC
TCGTACGTGTTCGAGTTATGGAGACTCCACTGTTTTAAAGCGTAATATTA
AAACACTATCCTTATAGTGGACATTTATAACAATTTATACTTTAAACGTT
TTAAACATTCTTAAAACCTTTTCTTTAACGACAACTTTAAGTACGACGAC
ACAACAAACGACTTTACTACAGACCCGACAGCGACACAAAATATGACAGA
AGACATGTCGAAATCGTCGGCTTTTGGATATCCGTATGACCGACAGAAAC
CGTCACCGGTGTCCAAACGATTAAGGCTTCTTCATAACCTGGAAAGCGAG
GTACGGTTACAGATTCTGAAGGCATTCGTAAAAGAATATCTTAAATATTT
GGTATACGTATTCGAAGCAACTATTTTGCCAGAATTTTACCTTTAAAAAT
GGATTAGGATAAAAACACGCGTATTTTCTATGCAGTATTGCTGAATATTA
AACCGAAATTGTTAAACTATAAACTCCTTAAATCCATTAAAACTTAGAAA
AAAATCTAATTTCTAAAACTGTCGGTTTTGGCACCGTATTTGGCATATTT
TCTTTTATCTTAACCGATAATCTCTTAAGACTGAGATCGACGGTTTATAG
ACAGATAACTCTATTTCAAGTCTCAGTTTTATGATTATTTTCGTTATCGC
ATCAGTTGGGTCATATTCTCTCTTTGGTCATGCATCTCGCGGTAATATAT
ATCTCTAACCTTTATAGTCCTGAGCTAAGTTTTAAGCTTTGATCGAGGTT
TTTTTGGAAATGATACCCACAAAAACGTCATTGCAGCGTATTCATGATAT
GCACCACTGCAATGACTTCACGAAATTATGCAACTTTTCTGTCTTTTTTC
CCCACCCAATACGTCAATTTTTCTACTGTTTAAGTGACGTATTGGGTGGA
AAATCTTAAAAGCTCTCACAAGACTCTCCAGTGGTGCATATCATGAATAC
GAGTAACAATACCTGAAAAAATAACAAGGCTCTATCAAAAGTATTTCACG
AAAAGTAGATCTAGTTACATTTATACCAACATTCAAATCAACTCCGATCA
AAAGAATCTTGCTTGACCGGGATTATGAAATTACCTCCAGGGTCTATATG
AAGCTGTCAGCTCATCGGTTAATAGTGATATTCCAGCACGCGTCACTTGA
GCTATACTATGCTAACAGATTCAGTGAGGGACCACTTCCAGTAGGTCAAA
GACATTTGAAGTCTTACCTAAAGTACTGATTTGACATGGATATCAATTAA
AGAGCCATTCGACTGCACGACTTACTAACTGCGAAAATGTGAAAAAAAAG
TTAAACAATATCATTATTGTATTGGGGTTTTTCATGTTTTCTTAAATTCC
GCCCTTCTGGAAGCAAACGTTCGAATCTGTAGAGGCAATACCTTACGGAA
ATCGAACTTTTGCTTCCATAATGGCGGGATTGACCATTTATGCTACCCGT
ACCAATGGCAATCACCAGTTTATCCTCACCATTTATGCCAGGAATGATAA
TCACCAATTTAGCCTTCTAGTGTTTTCCTTATAATTTAACAATCGTTTTC
ATCTTTCTTTTTAGATGAGCATGCTTTCAACTTCTGAAATTTCCGAAGAC
GAGTTGGAGAACAGTGACAACGATTCCGTTGATGACGAAGAACTCATCCG
ATTGGTCGATCAAGCAGCCAATGAGGAAACAGGATCAATCACAGATGAAC
CAATCACAGTCGAGGAAAAAATCTTGGATGTCGAAACCGTACCACGTGGT
CCAGGAGTTGGCGCAGATACATCCAGTGAATCGGGAGCGAGTGTTGGAGA
TGTATCGAGTGAACCCGATGAGATGTTTAAACTTGTTTTGGCGGGAAATG
CGGCCGTTGGAAAATCAAGTTTCATTCTGAGACTTTGCAAGAATAAATTT
TATTCAGCTCTGAACGCAACGTTAGGTAAATATGGAATTTTTTAAATTTA
TTTCATCTTCTGTTCAATGTCCTAGGTATTTGTTGGGACCATTGGGTTTT
TGCATCAAGATTTCGGAAGTGAATTGAAAAATCGATGTCAATAACTAAAT
ACTATTATGAAAGTTACATAAACGTCGATCTCAGATTTTGTGCTTGTTGG
GAAGGTGTACTAAGGGACTCTATGTTGCAACTTGAAAACTTGAGCCTTGA
AACAATACGTAAGCCCAGGAAAATTTCCTGAAGGTTTTGGATAAAATTTT
ACGTACATGTCAAAAAAGCTTAATAATTTCTTGAAAGTATATTGAGACTT
TACTTTCAGATTCGTAAAAGCTAGTAGCAACACTAGGGGCCAATTTTCAA
ACATTTCTACTTTTTTTGCAGGCGTCGACTTCCAAATGAAACGCATGATT
GTCGATAAAAAGAAAATCGCTTTACAATGCTGGGACACGGCTGGACAGGA
GAGGTTTCGGAGTATTGCCAAAAGCTACTTCCGACGTGTAGATGGGGTCG
TACTGTTGTATGACGTCACATGTGAGAATTCGTTCCTGGATGTCAGAGAA
TGGATAGAATCGATTGAGAGCTCGTCTGATAACGTACCGGTCATCTTGTG
TGGGAATAAAGTAGGTCTTGATTCTAAATTACCACGAAAATACTCTATTC
CATGGTTCCCAATTTCATAAGTTCAGGAACTTAATAATTTAGCAATGAGT
TGGAAAGGAAAGTTTTAACTCTGACCTTAGGATCTCAGGATTTAAAAGCT
CAAATCTGCCCCAATAAGGCTTGGAATATAGCCTAGAAGCTATCGAACCC
CTCCAAAATCGAAATATTCAATGAAATAACGTTAAATTTTGAAAAACGTT
AAAATACACTAAAATCTCAATATTCGACCATGATTGTAGCCATTGATTCA
ATATTTCCTCCCTATTATTCATTAGGTCGACTTGCGTCCTGATGCTGAGC
GAATTGGTATGCCAGTGATTAGCCGAGACCAGGGCCAACAGCTTGCCAAA
GACGTTGGTGCGTTATTCATTGAAACTTCAGCTAAAGAGGGAACCAATAT
TCATCGAGCTTGCAAGGATCTCATAAGGTAAGGTTGCCTGAAGATTGTCA
CCAAAGTGGTATGAAAAATAAAAAAGTGTATTTTCTTCCTGACTGACATA
AGTTAATTTAGAATTTCTGTATATTTGTACTTGAAAAATGGTCCCACTTT
CACTAAATTCTCCAAGATGATAGCTCATATACTATGTAAAAAGGAATTTT
CGATTCAGGCACATGGCTCCTATGTAATCTAAGGAACTTAAAAGAATAAT
TGACAGATTATTGCAACGATTTCATCACATTATTTTGCACATTTCCGACT
TCACATATCCTAAATCTTTTAACTCCTTTTTTTCGCAGGATGATGCAGCG
TAATGAGAATCCGAAACCTCACCCGAACGGAACAGTTCAACTCGATCCTG
AATCCGAAAAACCAAAAAAAGCTGGTTGTTGTGGCAAAAGTTGAAAAGTC
TTTTGATGAAAGTTTCCATCATTATGGATGCGATCAACAGATTGCGTAGA
GAAAAAGGAGAATGATTCGCCGATCCCAGGGCCATTCCGATTTGATGACT
GATTCGTATGGTTCGAATGGATATGGTCAGGTCAACTTCGGTACTAGTCC
AACGTTTACGAAGAAAACGTCTGGAAATTCCCTATGACGAGAACTCGTCA
ACGTACACCCTGGAATGCACGAGTGTGTCGCCCTGGAAGATTTGAGCTTT
AAAGTTAAAAACCATCTCACTTAACTGACATTACCATCTTCGCCTAGCCC
TGTCCATCCACAGACCAGGACGAAGATATTCGGTTACAATCAACTAAATG
GACGCAAGACTCAAGACTCAAGAATCAAAACACAAGACTCAAGATCCAAG
ACTCAAGATTCAAGACACAATAGATTTTAAATTTAAAGACAATTTTTAGA
GTGGTAAAATCTTAAGTATTTATATTAACAGCAGAAAATGAATGATTTTG
GGGAATTTTATTTATGTTAAGTAATAAAACCCATTAAATTAGGATGTATT
CCCAAAAGCTGACAGTATTAGGGTTTGGTTTAATTTGTCAGACATTTTAC
AGACATTTTACAGGTGTGATAGACCCTCGACATATCTATCAATACGTTAA
GTTCCTTAAAAAGCTTGCAGGGGGGAGGGGAATGATTTTGAGAGACTTCT
AAAGTTACTAATGGATTTCTAAATAGAAAATCCTACAATATGGCCCAACT
AATCTAGTTTTCTAAACCTCTTCCAGTCAGCTAGTACAAAATTTTAAAGC
AACGTTAAATGGATGTTGAAACTACGCAGTGTCGTAGCTACCGGGGGGCT
AGAGGGTGCTTATCCCCCCCCCAATAATTCTCTTAATGAAATGGAGTATT
TTACCTTTAAATTTTGCCTTTATTCGAATTATTTTAGTTTTTTGAGTGTG
TTCTTGGCCAATTTAGAGCTCTAGATTTCAAAATTTCCCCCATCATGCCA
AACCATGGTTGGCCCTCACGGTGTCACTGAACTTATGCCCCTTCCCCCAA
TATCAATATGCCTCCTACGGCACTGCTACGTTGTAAGTCAGCTGGGTTTT
GTGCATTCATTATCATACATCGAGAAAATCTTTTCTTTTCTTTTCTTATT
TTGTTTTGTTTTTCATCTATTTTTGTTTTCTTCATGTAAATAGTTTATTT
GTCATATCAAGATTTGAAAAAATTAAAAACTATTATTGTACAAAGATTCA
TATATTTAAAAATAGTTTCAGAATATAAACTATGAAAAATAACTAATTGT
AATTTTTACGTTTATGAGCTCATAGTACTATGATGAGCTACACTTTTTTT
TAAGTACAACGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038221XLOC_038221Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060878-exon-scaffold_349-1575043694:688503..688971TCONS_00060878-exon-scaffold_349-1575043694:688503..688971Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1575043694:683547..683907TCONS_00060878-exon-scaffold_349-1575043694:683547..683907Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1575043694:682912..683150TCONS_00060878-exon-scaffold_349-1575043694:682912..683150Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1575043694:682445..682596TCONS_00060878-exon-scaffold_349-1575043694:682445..682596Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1575043694:680658..682133TCONS_00060878-exon-scaffold_349-1575043694:680658..682133Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1510915933:688503..688971TCONS_00060878-exon-scaffold_349-1510915933:688503..688971Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1510915933:683547..683907TCONS_00060878-exon-scaffold_349-1510915933:683547..683907Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1510915933:682912..683150TCONS_00060878-exon-scaffold_349-1510915933:682912..683150Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1510915933:682445..682596TCONS_00060878-exon-scaffold_349-1510915933:682445..682596Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1510915933:680658..682133TCONS_00060878-exon-scaffold_349-1510915933:680658..682133Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1491911889:688503..688971TCONS_00060878-exon-scaffold_349-1491911889:688503..688971Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1491911889:683547..683907TCONS_00060878-exon-scaffold_349-1491911889:683547..683907Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1491911889:682912..683150TCONS_00060878-exon-scaffold_349-1491911889:682912..683150Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1491911889:682445..682596TCONS_00060878-exon-scaffold_349-1491911889:682445..682596Clytia hemisphaericaexon
TCONS_00060878-exon-scaffold_349-1491911889:680658..682133TCONS_00060878-exon-scaffold_349-1491911889:680658..682133Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:680658..688971 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0692495	0.0603534	9.95383	5.30466	2.26672	3.90238	4.58244	6.84629	5.88892	4.35068	0.0950987	0.213213	0	0	0	0	0	0	0	0	0	0.127452	0	0.256951	0	0.162976	0	0
Blast
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BLAST of TCONS_00060878 vs. Swiss-Prot (Human)
Match: RASEF (Ras and EF-hand domain-containing protein OS=Homo sapiens GN=RASEF PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.647e-57
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 2 
Query:  731 FKLVLAGNAAVGKSSFILRLCKNKFYSALNATLGVDFQMKRMIVDKKKIALQCWDTAGQERFRSIAKSYFRRVDGVVLLYDVTCENSFLDVREWIESIESSS-DNVPVILCGNKVDLRPDAERIGMPVISRDQGQQLAKDVGALFIETSAKEGTNIHRACKDLIRMMQRNENPKPHPNGTVQLDPESEK-PKKAGCC 1315
            +K+VLAG+AAVGKSSF++RLCKN+F   ++ATLGVDFQMK +IVD ++  LQ WDTAGQERFRSIAKSYFR+ DGV+LLYDVTCE SFL++REW++ IE ++ + VP++L GNK D+R  A   G   +    G++LA   GALF ETSAK+G+NI  A   L R +++  +     + T      S+K P+   CC
Sbjct:  542 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRTDKDDSRSITNLTGTNSKKSPQMKNCC 738
The following BLAST results are available for this feature:
BLAST of TCONS_00060878 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASEF3.647e-5753.30Ras and EF-hand domain-containing protein OS=Homo ... [more]
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