|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060862 ID=TCONS_00060862|Name=TCONS_00060862|organism=Clytia hemisphaerica|type=transcript|length=2896bp
GCTATCGGTAAAACATGGCATCCAGATCACTTCTGTTGTTCATCATGTCA
AATGTCTCTACAAAACCAAGCATTTGTGGAGGAGAATAACAAACTTTTCT
GCGAGAAATGTTACAATTCATACTACGCACCCAAATGCGCTCACTGCAAC
AATGCAATTATTGGGAACTGTATAAACGCGTTGGGGAAGAGCTGGCATCC
AGACCATTTCGTTTGCACTTTCTGTAACCGTGGTTTTGGTACTGACGGCT
ACCTTGTGGATTCTGGGAAGCCATATtgtgaaaaatgttttgaagatTTA
TTCTCTGTCAAATGTGGCAAGTGTATGCGGGCCATAACTGGAGGTGAAAA
ATATGTAGAAGCACTCAATAAGAATTGGCATTCAGGATGTTTCACGTGTA
ATcaatGTAATGCTCGCCTGGAAGGAAACAGTTTTTTCGTATCACGTGGA
ATGCCTTATTGTGGTCAACACAAAGGTGGCATGTAAATGGGGCCTTAAGT
AACACAAACAATGACGTCACACTGTGGTGCTGCTGTTAAAGATACATTTA
CACAAGAAACTGTCAACAAAATGGGAAATGAAAACGCTATCAAGTATGAT
GAAAAACgaaattgattttttccatTTCGGTATAGTGTAAGCCATGCCAT
ATCAAATCTGGTGGAAATTAACATAATTTTCCATAAAAAGATTCGACATG
TAGAAAGGTCTTTCAAGTGATTACATGCATGATAAAATGGGACCCAGTTG
TAccaaagtagtaaaaaaacaTGAATTGCTTGATGGAAGATATACAATGA
TTGGAAGGATATTTTAGAGTGGAATCTATTCGAGCTGTTGGTACAATACT
GAATGATTGGGTAGAGATTGTTAATCAAAAGCTTTGGTCCAGAAAAAGTC
TGCAAATTGGCGAGGAGTTAGGAAAAGTAAattaatttcaacatttttta
atattaaGAAAATTGATATGTTTccgttgaaaaaaatttctattttatta
ttattaatgtCGGTTTGTTTATGATGTCCAAGATCAGTGTTTGACCAGTA
ATTTGTCTGTGTAAACATATCCAGCTTGTtttttcaacgtccatctaacg
ttcataacgtccaaataacgttagatgaacgttaaaagaacgttgtgtgc
aagCTGGGTAGCGATTTTAATCCTTCAAGGATTTCCGCTGTTTATTCATG
AATTTTGCATTCTACCAACGTCGCGAAGCCGGAAATAGAAtattttttca
ggcaaaaatatAACCCAAAACTTGTCCCAGGGTAGATTTCATTTTAACTC
AACACCCGaatattttttaggttttttgctttacaaaacttaaaaaaaat
attttttttgtcttttgttAGTAtcttcattttgtttgtttgtttgtttg
tttctttCATTATTTATTTGATATGAACTTatacttagaaaaaaattttt
gctttacttttaaattaattaattttatgCCAATAcataaataatgaaat
aattttttttattaataattttaaaaaatgttttattaatTTACAAACCT
ACTATCTACCttttagaaaagtttttatgttttaaaattttgtttttttt
tcaaactttttatttgttCTGTCGCGATCGTTATTCCCAAAAACaacgaa
ttttcttttgttaacataaattgtgaattatttttaaattcttaTTTTAT
CTGTCATGTTAAAAGTCACGTGACAACCTTTTTAACCAATGAGATTCAAT
TATTTGGATGGAAATTTCACACTAAAAAGTTTTGTTACACCCACAATTCA
GTTTTTTCACCCAATTAAAAAAATTCGTGAATATTCATGACATAATGTTT
TATACCCAAAAGAGACCGGGTGTTTGCCATTAATTTTGTATTCAAACAAT
AAAGCTAGTCGCAAGCGCCCGGTTTGCTTTGAGTATTTCTGTATAAAACA
TTATCTCATAAATTATAATCACACGTACTAAAATCCTGAGAGCAATTTCT
AGTCAGTCATTTTTCAGGTACTCTCTTTGGGACTTTGCTTAAAGGCTGAA
ACCATAATTTTCTTCgaaattttgccattccaaaagtttaaagaacaaag
tttttaaaataaaactttgttgtCTTTCTTTAAATGAAACCCTGATAATT
TCTTACTTTTATAAATTTATTGAAACAGAATTTAATTTTCGAAGAATATA
CCTTTTTCTACCTTACCAGCTGGCATagaacgttgtttcaacgtttatct
aacgttcacaacatccatataacgttagatgaacgttgaaacaacgttgt
ataCCTTTTTCTACCttacaatatattttatgcAACCAGTCGTTCACCAG
AtgcaaaacattaaaaattggGGATTATTTTTTGACATATTGGACGATAG
TATCAAAATTTATATATGTAAACCTTGGGAATTATATTTCACTATTGTAt
aatttttcattgtatttttgtagAATTCCATGTGCTCGTCATCTCTTCtc
cccagctggtacacaacgttgtttcaacgttaatctaactttaaatggac
gttgtggacgttagaaaaacgttgaaacaatgctgtgtgccagctgggtc
tgCTACTGTgtagttttagtttttttgtaatttttgttttaattttatat
gTTATTGCGTGTGTGTGTCCGTGTCAAAATCGTAAAAAGAAATGATTTTT
CTATTTAAACATTCTTGATTTTTATATTTGtattatttttccaaattttc
tcaTCATGGAGAAATCATtatttcaaatctttctttggtCATAAATCGCC
TGTAAAATTACATTTCTACATACATCAAATAACTCCCGTTCATTCCAGAA
atcgaatacacgttttttttttaagaaacatgaagctcagaatgcc Run BLAST on NCBI transcript from alignment at scaffold_349:639003..648355- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060862 ID=TCONS_00060862|Name=TCONS_00060862|organism=Clytia hemisphaerica|type=transcript|length=9353bp|location=Sequence derived from alignment at scaffold_349:639003..648355- (Clytia hemisphaerica)
GCTATCGGTAAAACATGCCACCCAGATCACTTCTGCTGTTCATCATGTCA
AATGTCTCTTCAAAACCAAACTTCAAAACGTTCATTATACTCTTTTAATT
TTCAGTGGACCATTCGTTAGTGCTATCGGTAAAACATGGCATCCAGATCA
CTTCTGTTGTTCATCATGTCAAATGTCTCTACAAAACCAAGCATTTGTGG
AGGAGAATAACAAACTTTTCTGCGAGAAATGTTACAATTCATACTACGCA
CCCAAATGCGCTCACTGCAACAATGCAATTATTGGGGTAAGTACAGGTTT
TCTAAATCCAATTATCTGTTTTTTTAGCTGCCATCGAGATAAGAAACCCA
ATGTTCAAAATTTGTGTAGGAGAAAACTGAGATTGCCTTTGCTTTGCTTG
ATTGATATTTTGGGATTGGCCCTTTTCTTGATTACATCTACTAGAGAAAA
GGCTAATCTCAAAATTGTTAGCAAAGCAAAGAAAGATCTTATCTTCAGAT
TGGACAATTTTTCCTCGATGGCAGTGATTTGGTCTCGAAACTGAAGCTTT
TCCCACATATTTAAACTCGTTCTCTTTGGGGCTTATTTGTTTTAAGCTTG
GAGCAATAGCTATTCTTTACTTTCAGATTCAGTATTTCGTCACCAGTCTT
TCTCGTATTCTATTTACGGGTAGTTAAGGTTTTATTGTTTCTGGGGGGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA
ATTGAAACAATAAAACTATTAGCAGTCGCCCGGTCTATTTTTGGGTGCTT
CCGTATAAAACATTACGTCATGATAATCGCGATTTGTTTTTCGCGATTTG
CTGACTTTATTTGAAGCTTAGGAAATAAAGTAGGGATTTCACAGTCTCTG
CAATTAATGGCTTATCAGAACTAAGTTATCAATGGACACAAACGTCTTTT
GGACGTCTAATGTACGTTTCCAGGACGTCCAAAGGTCTTAAAGCCGTCCA
TAGACGTTGCGTGCCCATAGGAAAAAACTATTCCTTTAACCAACGGAATG
TCGTTATTTGAGCTCGACTTGTCCTATCTTAAGTGGATAAATTTTCGCGG
TATTTGCGTATTCTTTCCTCAACTAATTGCCTTCATTTTCCTACGGGTTT
TGGCAAAAATCCTGAATTTTTCGTTGGTACAGTACTAAATTTCGGAAAAA
TAGCGGAAATCGTGAAAACCGCGAAAATTAATCCACGCAAAAATTTGCCA
TGTAATAAGTTTCGTTTGGATAGTTAAGCTCCTGTTGAGATCATGGGTTT
TGTGTGGTTAGACGTGAAACCTTCCATTTAAATTGCATGTTTTTGTAATA
TATCAATTTTTTGTTGTTATAAATGTTGCATCTTTCCCCGAATCTTTATT
TCAAGAAAGAAAAGCACAAATGAATTTTATAAAGGCTTGTCTACATTGCA
TGATTTTATTTTTTAAAGTGTAGACCAGCCCTTATAAACTTTGCACCACA
CAAGACTTTTGCACCAAGTTCAACAGGGATCTTATGAAATCTAAAAAATG
GATAGATCTTTAATCTAGAGTACTAAAGATATTTCGATGTATATTTTAGG
ATAAGAAATTGTTTTAAGACATTCTACAAGTAGATTGTTGTTTATAAAAT
TTGAAGTATCATATTTTGTACTATTTTTTGATAATCTAATTCAATTAACA
AAACAACTAACGGAAAGAAACCTTGACTAAAAAACAACATCTATTATTAT
AAACTGGCGCTAACCGACCGTCCAAAACGAAATTGATTTCCCTGTTTCCT
TCTCAAGAAGCACTTTCGCTTTTGAATAATTCTCACAATTCAACTCGAAC
ACGCATGTCACACTTGTAACACATATTATTACCATAAAGCACGTGACCTC
CTCACACTCATCTTTCTTGTTGTGACGTCACTTACGCAACATCCTTTAAC
ATCACGCTAACACGAGACTAACAAATTCAAACACTACGCTAACCTACAAA
ATCCGTGATCTTAACATCACGCTAACACACTCCTAACACAGACATTCACT
TACAAATTTAACAAATACTAACCTACATCCAACGCTCATTCTTCACTTCA
CACCTTTTCGTAGGCTTTACATTCCCAAAGAGACAAGATCTGTGACGAGT
GCTCATCCGTAGCTTCGGCAAGCGGGATTTATGATCCGATCTCATGCTCA
AAATCGATCAACTGGCTTCTAAATCAAATCCGTGAAGCTGATACAGAATA
CGAAAAATTCACGCGCGAGAAAAATGTGGCCGCTCACCGTTACCGTGAAG
CAAAGCTCCAAATTGCGGCTATGAACCGTAGGAGGGGTCACGTCGAACAA
GAGATTGAACAGTATGAATTCGATTACGAACGCACAAAACGTATTTGCGA
GCACAGAGTCAAAGTTTGCGCCGCCAATCAAAATTTACGACAAAAATCAC
ACGCAACAGTGGAAACGGTTGCTAATCTAGAATCGAAATTATATCAAGCG
AAAAACCGTTTATCGAGTAACACTATGAAATATAACTCCGTACTCAGTGA
GTACAAAGAGCGTGGTCGGAGATTAACCGATTTCCAGAAACGGCATCTAA
AAGCGGCCGGTTATAATCAATCCCTAACCAGCGATTTAAACGAAATGCAA
GCACGCGTGGAGACGCTACAAGGAAGACATGTCTTCAGGCAACATAAAAT
GGAAGCTGTCGCTAAGGAGATGGAGGAACTTGCTGACGTCATCGAAGATG
CGACGACGCGAACGGAGTTAGCAGAACAGTATCATTTCTCGCTAGAGATT
AACAGAGAAACTCTTTTAGAAGAGATTAATACCATCAAGACAAAACGTTA
TGATGCTCTGGATAAAATCGAGGAAATAAAACGATTGAGGACTCAGATTA
TGCGACAGTATAACATAAGTCATCCGAGTCAATTACTAAAACGCTAATTT
ATCATTAAAAGTAAGTAAGTCTGCCACCGCAGTCGGAGGCGACCCGAAGG
CTCCTCTTTCGATAGCTATCTACCAGAAGGTAGGGGAGGGGCGTCACTCT
TGCTCCACTTACACTTGATCATTCTCTTGATTGCTGAGCATCAAGCAGAG
AGGCATCAAGTATCATTTTAGGAATCTTTGGTATGACCCGGCTGGGATGC
GAACTGTAGCCGGATGCTCTACCACTGATGCTTTTAAAGCTCTGAATGGG
ATGGAGACGAAACCCTTGTATGGGAAATGAAGCCACTTATATCCCATTTG
AAGCGTGTGACCTGCTTGGTTTTCGCACAAACGCCGGATTGAAAACACAA
AATATCCAAAGATTTTGAAAATATACCATGTGAAAACAAAGAAAGGGCTA
GATTCAATCTGTTATTCTAAAGGTGACTCAAATCTTATGGCTAACTATAG
TTTAATATAGAAATTTCCTGTAACATTTAATCATATTTGACCGTTTTTCA
TTTTCTTTTTATATTCAACAATTTTATATCAAACATTATTTATTTTTCTA
GTTTTTAATATTATCATATTGGACAATTCTAATTTTTCTTCAATGCCTTA
AGGAGGGGAGGCTCTTGAAATTTCAGATTTTTAGATAAATTGATTGAGTC
GATATATAACCTGGATGTTTTTTAGACAGTCTTTCGATGGATTTCACTGG
GCCTAAAGTCAGCCGGTTCGGCATGAACTAAACGGTTTGTTTTTGCAAGG
TAACTTAAACGGCTTTACTTGTATAGATGTAATTTTTATATTCATAATAT
GCACCATTGCAATGTCTTCTGACATTACATCACGGAACCAACAGCTCATT
GGTCGTAAGTGACGTAAAATCAGTCAATACGTCACTTGCAACCAATGGGT
CCGTGGAAGACATTGCAATGGTGCATATCATGAAGAATGACTTACCTTTT
AAATCTTGATACGAACATAACTGTCCGCTGCTGAAGGGACCAAAATACTT
CAATATTTAAAAAACTCATCCTAGGGCACTCGAGTATATGTCTCGATGGT
TTATTGGCGGCAGCCGTCTACCCTAAAGCTATGAAGGAGCAGGCTAATTA
CCCTTTAACAACATCCTTCAGCTGTCATTTCGTGAAAACATAGATATTGG
GCTATTCCAAAAATAGTCTGTACCCCCTATGTTGAGGAGGTGTGTCGTCC
AGGGTCTGGAAAATAAAAATCCAGGTCAGTAAAACGGGTTGAAAATCCAG
GGTGGTCAGTATAACGAGGTCGAAAATCCAGCGTGGTCCAAAGAAATGGA
AGAAAAAATCCAAAGGGGTCCTGAAAAATTGGAAAAAATCCAGGGGGTCA
CCTTTTTAAAAAAAGATAGGGGTACAAATTTTTCTGGAATAGCCCATTTT
TGGAGCTGGCAATCCCTCTAAAGCCTCGGGTTCAGACCTCCTGCTGCAAA
ATCTATGACGCGGTCAAGCGAAATTCCGTACATAACACATAACACATAAT
ATTTTTTTAGACTGCACATAACAATATTATATAGATTTTTGATTTGAACA
CACCTGCACATAGTTTGACATATTTAATTATCTTTAACTTATTGCACAAT
AATTATTCTACATATTTTATAGAATTTATTTTACTAATATTTATCATTTA
CGCGGAAGACATTTTTTTTTTTTTAATATTCCGGTAAAAATATCCGGTAA
TTTCTTTGGATATTTTTTAATCAAATATCTTGTATTTAAAGCTTTTTCTT
TTCATTAATAATATTTTCCCTTTTGTTCGACTTTGTCCGTTAGTTTTTAT
AACAATTTAAAATTATAATTTTTCGTAAAATTTAATTCCTTATTGTGGAA
AATATTTTTCTGTGGTAAGGTAATCTATTTTGTTGGGGTATTAATCTGAC
TGAAATGGTTATCTTGATCTATAACTTTGATTCTTGTTAACCTTAAATAC
GCCTTTTCATAAATTTTTTATAAGAACATCCAAAATTTTTGAAGCTTTCT
GATGTTTTTAACTTTTGATTTTTAAGCTTAAAAATTTTCTCAACTTGTTC
TTATTTTCACCATTTTTGAGCATTCTTGTCCATTTTCCCATTGGAAATTG
GGTGTTTTAGAGTCTGCAAAACCTTAAAATGTTCTTAACTTGTTCTTAAC
ATTTTGGTCATTGAAGCCTTACATTCTTATGTAGTTTGTTCTTCTAAAAG
AATCGAATTCATTTTCCAGAATTGTATAAATCTTCTAAGAAGTTCCACAA
CAATGTTCACAAAATGGTGAATTTAAGAACTCAAAAAGTCAAGTACATCA
AAAATTGTATAAAAGCCTTTGGATGTTCTTAAAAGCTTTACGGGATTTAA
GCCTAACGATGTTCTTGAAATGTTCTTTTCACCCGGTTCCGAATACAGTT
GACGCTCTCTAATTCAATTTTCAAGGGGAATTGGATTTTCTTCAAATAGG
GGCGCTTATCTAATAAGGGAGCGTCGTTTATGAGAGTTTCTTGTTGACAG
TGACTTTTAATATTATCAAATAAGGGAGCCTATCGAATAGAAAAACGTCG
AATTAGAGAGCATCAACTGTATTTTTGTATTACAAATCACGTATCTGATT
CATTTTCTAGAACTGTATAAACGCGTTTGGTAAGAGCTGGCATCATCCGG
ACCATGCTAAGAACATCAAAAATTGTATAAAAGCCTTCAGATGTTCTTAA
AATGTTCTTAAAATGTTTTTAAAATGTTCTTTGTATCCTGTTGCGAGTGT
TTTTGTATTAAATATTTTTGTATCTTATTCATTATCTTATACAGAACTGT
ATAAACGCGTTGGGGAAGAGCTGGCATCCAGACCATTTCGTTTGCACTTT
CTGTAACCGTGGTTTTGGTACTGACGGCTACCTTGTGGATTCTGGGAAGC
CATATTGTGAAAAATGTTTTGAAGATTTATTCTCTGTCAAATGTGGCAAG
TGTATGCGGGCCATAACTGGAGGTGAAAAATATGTAGAAGCACTCAATAA
GAATTGGCATTCAGGATGTTTCACGTGTAATGTGAGCCTTATTTTCTTTC
TTTGATTTTGAAAATTTTGAATTTTTGTGCCTGGGGACGAAGGCTAAAAA
CATAAAGTAAGGCTAAAACATGAGGCATTCAATAAAAAATGGCATTCAGG
ATGTTTCAGGTGTAATGTAAGTCTTATTTTCTGAAACTTCAAAAGTGGTC
GTCAAATCTTGCTGAAATTTGTTCCTTGGGTAAATAGTGGGCTACTTGGG
AATGTTTTTCTTTCATTCTTTGAAAATTTTGATTTTGTTTGGGCCTGGGG
ACGAGTTTTTTGCCAAAAAGAGGCTAAAACATAAAGTACTCAATAAAAAA
TTGCATTCTGGATGCTTCACATGTAATGTAAGCCTTATTTTTTGTTGTTG
TTTACTTTGTAGTTTGAAACTTCAAAAACGGTCAAATCTTGCTGAAATTT
GTTCCTTTGGTGAAAATCCGGGCACTAGGAGATGTACCGTACCATACCAG
GGATATATTTTTGGCGCATCTTCGGGATCTTTCCGCTGTTTTTTCCAGAC
ATATGAGCAAAAATACTGAAAGACAGAGTCTTGTTTTTTTCCAATAGGGA
ATGTGAAAGTTTAGCCATCATCCTACGGTAATTACGAATAAGTTATTTAT
AACAACACTTCTTCATCATTTTTACNCACAACTTCGGGGGTACAACTTTT
TCTTGTAATAGCCCAATACGAATAAGTATAACAACCCTTCCTTATTATTT
TTACTTTAGCAATGTAATGCTCGCCTGGAAGGAAACAGTTTTTTCGTATC
ACGTGGAATGCCTTATTGTGGTCAACACAAAGGTGGCATGTAAATGGGGC
CTTAAGTAACACAAACAATGACGTCACACTGTGGTGCTGCTGTTAAAGAT
ACATTTACACAAGAAACTGTCAACAAAATGGGAAATGAAAACGCTATCAA
GTATGATGAAAAACGAAATTGATTTTTTCCATTTCGGTATAGTGTAAGCC
ATGCCATATCAAATCTGGTGGAAATTAACATAATTTTCCATAAAAAGATT
CGACATGTAGAAAGGTCTTTCAAGTGATTACATGCATGATAAAATGGGAC
CCAGTTGTACCAAAGTAGTAAAAAAACATGAATTGCTTGATGGAAGATAT
ACAATGATTGGAAGGATATTTTAGAGTGGAATCTATTCGAGCTGTTGGTA
CAATACTGAATGATTGGGTAGAGATTGTTAATCAAAAGCTTTGGTCCAGA
AAAAGTCTGCAAATTGGCGAGGAGTTAGGAAAAGTAAATTAATTTCAACA
TTTTTTAATATTAAGAAAATTGATATGTTTCCGTTGAAAAAAATTTCTAT
TTTATTATTATTAATGTCGGTTTGTTTATGATGTCCAAGATCAGTGTTTG
ACCAGTAATTTGTCTGTGTAAACATATCCAGCTTGTTTTTTCAACGTCCA
TCTAACGTTCATAACGTCCAAATAACGTTAGATGAACGTTAAAAGAACGT
TGTGTGCAAGCTGGGTAGCGATTTTAATCCTTCAAGGATTTCCGCTGTTT
ATTCATGAATTTTGCATTCTACCAACGTCGCGAAGCCGGAAATAGAATAT
TTTTTCAGGCAAAAATATAACCCAAAACTTGTCCCAGGGTAGATTTCATT
TTAACTCAACACCCGAATATTTTTTAGGTTTTTTGCTTTACAAAACTTAA
AAAAAATATTTTTTTTGTCTTTTGTTAGTATCTTCATTTTGTTTGTTTGT
TTGTTTGTTTCTTTCATTATTTATTTGATATGAACTTATACTTAGAAAAA
AATTTTTGCTTTACTTTTAAATTAATTAATTTTATGCCAATACATAAATA
ATGAAATAATTTTTTTTATTAATAATTTTAAAAAATGTTTTATTAATTTA
CAAACCTACTATCTACCTTTTAGAAAAGTTTTTATGTTTTAAAATTTTGT
TTTTTTTTCAAACTTTTTATTTGTTCTGTCGCGATCGTTATTCCCAAAAA
CAACGAATTTTCTTTTGTTAACATAAATTGTGAATTATTTTTAAATTCTT
ATTTTATCTGTCATGTTAAAAGTCACGTGACAACCTTTTTAACCAATGAG
ATTCAATTATTTGGATGGAAATTTCACACTAAAAAGTTTTGTTACACCCA
CAATTCAGTTTTTTCACCCAATTAAAAAAATTCGTGAATATTCATGACAT
AATGTTTTATACCCAAAAGAGACCGGGTGTTTGCCATTAATTTTGTATTC
AAACAATAAAGCTAGTCGCAAGCGCCCGGTTTGCTTTGAGTATTTCTGTA
TAAAACATTATCTCATAAATTATAATCACACGTACTAAAATCCTGAGAGC
AATTTCTAGTCAGTCATTTTTCAGGTACTCTCTTTGGGACTTTGCTTAAA
GGCTGAAACCATAATTTTCTTCGAAATTTTGCCATTCCAAAAGTTTAAAG
AACAAAGTTTTTAAAATAAAACTTTGTTGTCTTTCTTTAAATGAAACCCT
GATAATTTCTTACTTTTATAAATTTATTGAAACAGAATTTAATTTTCGAA
GAATATACCTTTTTCTACCTTACCAGCTGGCATAGAACGTTGTTTCAACG
TTTATCTAACGTTCACAACATCCATATAACGTTAGATGAACGTTGAAACA
ACGTTGTATACCTTTTTCTACCTTACAATATATTTTATGCAACCAGTCGT
TCACCAGATGCAAAACATTAAAAATTGGGGATTATTTTTTGACATATTGG
ACGATAGTATCAAAATTTATATATGTAAACCTTGGGAATTATATTTCACT
ATTGTATAATTTTTCATTGTATTTTTGTAGAATTCCATGTGCTCGTCATC
TCTTCTCCCCAGCTGGTACACAACGTTGTTTCAACGTTAATCTAACTTTA
AATGGACGTTGTGGACGTTAGAAAAACGTTGAAACAATGCTGTGTGCCAG
CTGGGTCTGCTACTGTGTAGTTTTAGTTTTTTTGTAATTTTTGTTTTAAT
TTTATATGTTATTGCGTGTGTGTGTCCGTGTCAAAATCGTAAAAAGAAAT
GATTTTTCTATTTAAACATTCTTGATTTTTATATTTGTATTATTTTTCCA
AATTTTCTCATCATGGAGAAATCATTATTTCAAATCTTTCTTTGGTCATA
AATCGCCTGTAAAATTACATTTCTACATACATCAAATAACTCCCGTTCAT
TCCAGAAATCGAATACACGTTTTTTTTTTAAGAAACATGAAGCTCAGAAT
GCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060862-exon-scaffold_349-1575043694:648342..648355 | TCONS_00060862-exon-scaffold_349-1575043694:648342..648355 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1575043694:648070..648220 | TCONS_00060862-exon-scaffold_349-1575043694:648070..648220 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1575043694:642225..642461 | TCONS_00060862-exon-scaffold_349-1575043694:642225..642461 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1575043694:639003..641496 | TCONS_00060862-exon-scaffold_349-1575043694:639003..641496 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1510915933:648342..648355 | TCONS_00060862-exon-scaffold_349-1510915933:648342..648355 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1510915933:648070..648220 | TCONS_00060862-exon-scaffold_349-1510915933:648070..648220 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1510915933:642225..642461 | TCONS_00060862-exon-scaffold_349-1510915933:642225..642461 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1510915933:639003..641496 | TCONS_00060862-exon-scaffold_349-1510915933:639003..641496 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1491911889:648342..648355 | TCONS_00060862-exon-scaffold_349-1491911889:648342..648355 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1491911889:648070..648220 | TCONS_00060862-exon-scaffold_349-1491911889:648070..648220 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1491911889:642225..642461 | TCONS_00060862-exon-scaffold_349-1491911889:642225..642461 | Clytia hemisphaerica | exon |
| TCONS_00060862-exon-scaffold_349-1491911889:639003..641496 | TCONS_00060862-exon-scaffold_349-1491911889:639003..641496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_349 | supercontig | scaffold_349:639003..648355 - |
Blast
BLAST of TCONS_00060862 vs. Swiss-Prot (Human)
Match: PAXI (Paxillin OS=Homo sapiens GN=PXN PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 3.138e-32 Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 1
Query: 1 AIGKTWHPDHFCCSSCQMSLQNQAFVEENNKLFCEKCYNSYYAPKXXXXXXXXXXXXXXXLGKSWHPDHFVCTFCNRGFGTDGYLVDSGKPYCEKCFEDLFSVKCGKCMRAITGGEKYVEALNKNWHSGCFTCNQCNARLEGNSFFVSRGMPYCGQH----KGGM*MGP*VTQTMTSHCGAAVKDTFTQE 558
A+GKTWHP+HF C+ CQ + ++ F E + + +CEK Y++ ++P+C +CN I+ + AL ++WHP+HF C C FG +G+ GK YC K + D+F+ KCG C RAI E Y+ ALN WH CF C +C SFF G PYC H +G + G + +T C A+ F E
Sbjct: 372 AMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAIL--ENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSG--CQKPITGRCITAMAKKFHPE 557 HSP 2 Score: 84.7297 bits (208), Expect = 9.579e-17 Identity = 55/154 (35.71%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 1 AIGKTWHPDHFCCSSCQMSLQNQAFVEENNKLFCEKCYNSYYAPKXXXXXXXXXXXXXXXLGKSWHPDHFVCTFCNRGFGTDGYLVDSGKPYCEKCFEDLFSVKCGKCMRAITGGEKYVEALNKNWHSGCFTCNQCNARLEGNSFFVSRGMPYC 462
A+ +TWHP+HF C+ C + F E++ K +C K Y +APKC C AI+ N I+AL WHP+ FVC C F + G+PYCE + + C C + ITG + + A+ K +H F C C +L +F PYC
Sbjct: 431 ALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITG--RCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 582
The following BLAST results are available for this feature:
|
