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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060838 ID=TCONS_00060838|Name=TCONS_00060838|organism=Clytia hemisphaerica|type=transcript|length=551bp
taagaataaaagaTATCTGCCCACGCATGCCTTCACTTGCCCAAACGGGG
GTACAAAAGTAAGAAAGACCATGATTAAACCCGCGAAAAAGGCTCTGATT
GCTTTTAGCCTCGACTCAGAAATTCACATGTGAAATTaaaatccaagatg
gcgtcGGAACGGTGTGCAGAAGATTCTGCAACAAGACGAAGTCTTTCCAA
AAATGTCATGCAGATGAAGGTATGATAGTCAAAAATACCTATACTCATAC
caagaatgaaaatttttcacCTCACCCTGTCTCAAAGAAATTTCTTTGTC
CTCCCTCCCCCTCTTAAGCATAAAAAGTTGTACCGTGAAGTGAATGACTA
ATAATACAGTCGaggattatgccctaaataagagatatactctatttaag
agaaggtctcttaagttggagatttctttctcttaactaggagacttttc
tttcttcgtaaatttttggccttttcaTCATTTTGCGCAAGTTTTGAACT
TCATAGATCGACTCAGCAcgtttttttctcccttctagcaaaatttggtt
g Run BLAST on NCBI transcript from alignment at scaffold_349:166358..167141- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060838 ID=TCONS_00060838|Name=TCONS_00060838|organism=Clytia hemisphaerica|type=transcript|length=784bp|location=Sequence derived from alignment at scaffold_349:166358..167141- (Clytia hemisphaerica)
TAAGAATAAAAGATATCTGCCCACGCATGCCTTCACTTGCCCAAACGGGG
GTACAAAAGGTATATTTTTTGTCATTAAAATCTAATAACATTAAAATAAA
GAAAAATATTTTCTTTTTTTTAAATACTAAAAATTTTTCTTTGAAAAACT
TTCAAGAAATTTAACTTAAATTATCTAATACATTTTTGATGTCTTAACAA
AATATCTTTGTACCCCCTAAACTATTTAATTTAACCTATTTCGATAGAAC
AACCACGGATATAATGACGTAATGTTTACTCCATTTCTTTAGTAAGAAAG
ACCATGATTAAACCCGCGAAAAAGGCTCTGATTGCTTTTAGCCTCGACTC
AGAAATTCACATGTGAAATTAAAATCCAAGATGGCGTCGGAACGGTGTGC
AGAAGATTCTGCAACAAGACGAAGTCTTTCCAAAAATGTCATGCAGATGA
AGGTATGATAGTCAAAAATACCTATACTCATACCAAGAATGAAAATTTTT
CACCTCACCCTGTCTCAAAGAAATTTCTTTGTCCTCCCTCCCCCTCTTAA
GCATAAAAAGTTGTACCGTGAAGTGAATGACTAATAATACAGTCGAGGAT
TATGCCCTAAATAAGAGATATACTCTATTTAAGAGAAGGTCTCTTAAGTT
GGAGATTTCTTTCTCTTAACTAGGAGACTTTTCTTTCTTCGTAAATTTTT
GGCCTTTTCATCATTTTGCGCAAGTTTTGAACTTCATAGATCGACTCAGC
ACGTTTTTTTCTCCCTTCTAGCAAAATTTGGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060838-exon-scaffold_349-1575043694:167083..167141 | TCONS_00060838-exon-scaffold_349-1575043694:167083..167141 | Clytia hemisphaerica | exon |
| TCONS_00060838-exon-scaffold_349-1575043694:166358..166849 | TCONS_00060838-exon-scaffold_349-1575043694:166358..166849 | Clytia hemisphaerica | exon |
| TCONS_00060838-exon-scaffold_349-1510915933:167083..167141 | TCONS_00060838-exon-scaffold_349-1510915933:167083..167141 | Clytia hemisphaerica | exon |
| TCONS_00060838-exon-scaffold_349-1510915933:166358..166849 | TCONS_00060838-exon-scaffold_349-1510915933:166358..166849 | Clytia hemisphaerica | exon |
| TCONS_00060838-exon-scaffold_349-1491911889:167083..167141 | TCONS_00060838-exon-scaffold_349-1491911889:167083..167141 | Clytia hemisphaerica | exon |
| TCONS_00060838-exon-scaffold_349-1491911889:166358..166849 | TCONS_00060838-exon-scaffold_349-1491911889:166358..166849 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_349 | supercontig | scaffold_349:166358..167141 - |
Blast
The following BLAST results are available for this feature:
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