TCONS_00060788 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060788
Unique NameTCONS_00060788
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3123

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060788 ID=TCONS_00060788|Name=TCONS_00060788|organism=Clytia hemisphaerica|type=transcript|length=3123bp
GGaaaaatgacataatatttgcaGCTGGGAACAAGAAAGCTGGCCAAGAC
ATGTCATTTAAAGGCTTTACCCAAGAACAGGTTGAATCTTTtagacaagc
attttcagtctTCGATCGTGAGAATCAAGGAAGTATCACTTCAAACGATT
TATTGATCGTCATGAGGAATTTGGGACAAAATCCAACTCACGCTGAAATC
AAAGAAATGATCGCCGAGATTGACGCTGACGGTAATGACAATATCGAGTT
CGATGAATTTATCACAATAATGGAGACAAAGTTACGGAATACGATTCCTG
ATGAGCACGTGCTCGAAGCTTTTCACGTTTTCGATCGAGATAACAATGGA
TTTATTTCGCTCAAAGAATTACAACATGTGATGTTTTGTTTGGGCGAGGT
TCTCCCCATCAACGAGGTGAAGAAGATTATGGCAGAAGCGGATTTAGATC
AAGATGGCCAGCTCAATTAcaaagAATTCGCAGCTATGATGAGATAGAAG
AGACCCTGGTCGTTGTCCGGCTCCAAAGTAAAGACAAAGAGTGAAGAGAA
GTCTATTTATTTGCAATTATCTATCTATCTTTTCATGAACACGACTTTAA
TTTATCATCCAACACGATTGTTTGCTTTCTTTTCATAAGTTTTCCCAAAa
agattgggctattccagaaaaaaaaaacgtataccccCTGTAGAGGAGGT
CCATAcctctgtggctggaaatgctgtaaccctctggaattccaggcaat
ttcaggtttaaacccctctggaattgtgagttttagtaggatttaaaaag
ctactaCCATTTgcatctccctatggaattccgccataTATAAAACCTTA
CCTTCTTGGAATAGCAGggggtatacgttttttttctggaaaagtccatt
TGGGGCCTACTTGGGTGGCACAAAATATATCAATAACGTCCAATGATATT
TTAGTGGACACAATTACAATTACACTGCGAGActtcaacttttctttttt
tattttttcttaagcCATTTTATGTCAATCAATTTAACGTCCGTTATGAA
TCTTCAATTTACGTCTTTCTCGTCTTTTACGGCGCTTTTCCCTCTTTTTT
CgcgttttatttattttacgtTTCGAATGTAGCCTAGTCACTTTTACCCC
CATCTCTCTTTACAGTGAAATTGATCAGCTTCTGAGCTTTCTGTTCTTTG
ACTTTAAGTCCTTTCAAAGAAACAACAAATTTCATCGGTTTCGAAATCAC
CATAGCACCTCCACCGCCATTATTAAAACCCATGGCTGCCGCAGATTGCT
CCTGCGTTACACCAGGTAGTTCTTTACCAAGATtagctgacgtcagcact
tcaTATTGCATACCAGCTCCGCCAGCTTCGTTGAAACCCATGGCTGAAGC
TGATTGTTTCTGAGACACCCCTGGGTAGTCTTGACCAAGGGTAGCGGACG
TCAATACTTCATACGGGTTGGGTCCTGCCGCAGGTGGCAAAGGTCTAACG
AATTCGAATAAACCACCACTACTGCTAGCACCTGCCGCACCTGAAGCTCC
CCCTCCACCCATTGGTTTGGTTGGTAAATTATATTGCGGATACCCAGTCC
CTATAGACTGTATCTTGCTCCCGCCTTCCACCTTGAGGCTACCACCTCCG
TCATGAGAATCTCCTTCCTTATAATGTTCAGCATTATGAATCAGGTCTTC
AGTACCACCGTGTTCCGGACCGTGCCCGTGGTGCCCGGAAGGCAAATGAA
CCGGTTTAtcaacattaaaataatcattgtGTAAACGCATATTATGGGCG
TGTAAACCTTGTAAAGGGTGGCCGCCTTCAACTGTCATTACGTGTTGTCC
GCTTCCGCCCTTGATGGAAGTTACCTCGTGTTCTAGGATATCCGCTTGCA
TGGACATGAGTTGAGCATTTTGTTTAAGCGCATGCGCCTGAGATAGTAAA
TACTTTTCTTCGTTCTTATGTGAAGGGACGGTGTTTGGGATGAGCATGAG
GTTACATCCTGGTTGTGGTTGACATGGAGCATGCGCAATTGATGTTTGGT
GAATGATTTCGTCGCCGAATACTGGGCCGTTTATAGCACCGATGTCTGTA
CGCTGTTGCCCGTTCGATTTCGATCGGTTTGTCAAGTGTGAATCTTTTAT
AGCATTTATGCGTGTGCGAAGTTGCGCGTTCGATTTCAGTCTATTAGTTA
AGCGTAAGTCTTGTTCATTATCTATGTCTGTGTCTATGTCTCCATGtgtt
ttatttgatttaaagtcttttttaacattgatATTTATAGGGAGCATTGG
CTTTGATTCCtgtatttttgttgtttttgagttTTCGCTATCAGAGATGC
CTGTGCCAAGCGTAGAGTTCGATCTTCTTCTATCTGATGGTAAGAATCTA
GGAAAAGTCGTGTTccttttcaattttccaaaagGATCATGTTCATTTTG
AATACTTCTATTTTCACGTAGTCGTGGTTCATACGTTTTCGACTGAATAA
ACTGTTTTGTGGATAAGTCTTTTATAACAGTTGTTGATTGGTTATTATTT
TTGTGATGACGTTTCGTATTGTTTGTTGTATGGTTTCTCTTTAGAACAGG
GTGTTGTACCTTAGCCTGCAGTCCATCCTTTAAACCTGTTTCAATACTTT
TATCATCGTTCTGTCTTGTCAATGTTGTGTAGGCTACATTGGGATCATCT
GATGGTCTATGAGCTCCTGATTCTTCTATATCTTCGTCATCGAAAGGATT
TTCGAATTCGTTTTTCGTGGAATCCGATATGGCATCAGATGTAAGATTCC
TTGTTTCTAGTCTAATGTTTTCCTCTCGGTCTACATCACAACCGTCGCCA
TCCTCATCATTATCAGGGTCTGCATCGTTTTCCTCANATTCCTTGTTTCT
AGTCTAATGTTTTCCTCTTGGTCTACATCACGACCGTCGCCATCCGCATC
ATTATCAGAGTCTGCATCGTTTTCCTCGAAAAAGTTGTCCTCCAGTTCAA
CAAAATGATGATATAACGCTTGTCGTCTATGGATAACATGTCTGTTGATT
TTCATTCGTGCTTTGATCAGTGATTTCTGGAGAAGAAATGAAGCAGCCTC
TTCTTCGGAGTCCACCTCTGACc
Run BLAST on NCBI

transcript from alignment at scaffold_349:465452..475349+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060788 ID=TCONS_00060788|Name=TCONS_00060788|organism=Clytia hemisphaerica|type=transcript|length=9898bp|location=Sequence derived from alignment at scaffold_349:465452..475349+ (Clytia hemisphaerica)
GGaaaaatgacataatatttgcagtgaggatttctttatttgattatttt
cagtgggggcCCCActgagtataattttccactggggacgatattttggc
caattttttcagtgggaaggggtcccagtgggtttgAAGGAATGGGGTGT
CATTGTAATACACTTGATTAAATAAGCTTTTTCGtaagaataaaaaatta
aaaagctacTAGTGTAGTGTAGATGACAAACGAGGCCAATGAAAAAGCAA
TCATTTTAAGAACCATTACATTTTGGTTCAGCCTCGATTTGTTTGAAATT
CGAGTgctttaaattattttgatttttaataacttttaatCGCTTACTAA
TTTGACCTTTTCATTTGCTTAAAATTCAGTCAATcatcagcattgttctt
aaattgttcttatttttagaaatttttgagcctcggtgctcttataaaaa
gagtGTAAAAGTTTCGTTAACTCGTgatatcccagctggcacacaacgtt
gtttcgacgtttatttaacgttcacaacgtccatataacattagatgaac
gttaaaacaatgttgtgtgtcAGCTGAAATAGATCAGCGCTTAGAGCTCT
ATATATTTTCTATCCACACCTTAAAGACAAAACTTGAGATATAATTTGAT
AttagaaataaaattttcacttaTAGAGTCTGCATGTGAGTATTTGTGGA
GAAAATTGTAACATATTTTGTTCGTCTTCtccttcaatttttgttttcac
aTCCACATTTGAACCTAAATAAAGATGTCATAAAGGCTTTTTTGGTTCCC
TTAAACcctcttttataagaatatactataaaaatatttataatgaaTTT
GGTCTAACacttaagaatatgctaagaatcaCCATCATAAAATTTACCAA
CAAAATCTAAGAATgctatttttaaagcatttttaacTGTCTTACAGTCC
GACTGGACgcgagggcctctaaaccgatcttgtacaaaaatctttttaag
gTACAGTTTGTCATGAGGACTTCCCCGCACCCTGCAATTGAAATCTTCAT
TCGACTGGCTTTATTCATCTCGCCTGCTCTTCTTTTCCATTCTTTGATTT
GCTCTCTCTCCATTTTCGTTAAATCGTCGGTGATGCTCAATTTTACGTAC
TTCTAGTTCAGTCAACTTTTTCATAAAGCggtattttttatggctgtcTT
TGAAGGCGACTTTGATTGGACGCACACCATTTGATTGTTTTCCAACTCGA
GAGAAGAATATGGTTGAGTTTTTACGTTTGGCCTAtcaattaagaatatg
ctaagaatagcACCGTCATAGAATTTACCAACATAACCTAAGacgaatgc
catttttagagcattttaactgtaaattgcaAATTACAAATTACTCCCAT
AAGGTTCAATTAATTTCACAAACATGCTATCTTATGCTTGTATTACATGT
TAAATCAACTTGTATCCTAGAAAAGAATgaactgtaagaatattttagta
gCTTAAATTTTATTTACCCTATTTTGGTTCTAGCAAAAATGTTTTGACTC
ACTTCGAGTTGCACCATTAGGGCTTATGCCATTTTCAAATAAACTTATAT
CGTAGACAGCATCCTCAACTAAAAATGTTGAGAAATTATTCTACTTTGTC
AGAGGTGCACATCCAAGAAGTTTTTGAAAGACTTCAACTGACTTTCATTT
ATCTCCTATCACTTTTTTACACTGCATTTTTTAACGTGCAAGTACAGAAA
TTCTCTTTTATTCTGCCTTGTCAGCATTAGGGATtagtcagaaagtatct
actaggtgTGGGCGgaagatattttcaaaacttcaaaaaaaaaaatcgca
CCCCCTCCCCTTGATATCGTCAAAAGAATTTCAAGCCTCTCCATCTAACC
AGTCAATATATTAAGTCACCTTTCCTAATATAGGCCACTTAAAATGACAT
GACATTTTcgagaccccccccccctaagggtgggaaaaactTTTGACATC
CCCAACCCTAGAATTCTTCACCCTCCTCctgtagatactttctgaccact
cccctAGAGGTGTGTCTCCTTTCTATATCATTTTTATCTTTAAGCACGCT
TAATGTTGGTCGcattcccagctgacacacaacgttgtttcaacgttcat
gtaacgttatatggacgttgtgaacgttagataaacgttgaaataacgtt
gtatGCCAGCTTGGTTGTGTAGAATTATAGACGAATTATATATAATCTTT
GACGCGTTAAGCTATTTAGCAAAAGCTTAAATTATTAAGTCGCACATATT
TTAACCCCCGGCATGACTGTGAGATTTGACTGTCAAGTTGGCTCAATTAT
CACTGTCTGTTTATAAATATCACCGTATGAACAGGGGGTTTTATTGAAAT
CACGGCGAAAGTCTTTATTTGATGAGCACTATGCTAATttttatgacaat
tttaataatttctttatgaCTGAAGCTTTTAAGTTTTAATGTTTTATAGA
GTATCTCAATTTCGAATTTTGAGCTTGTTTGATTTTGTAGAAGTTTGGTT
TTGATACTAGTGAATACAGGAATGGTAGGTACAGGTCAGTTTGCAGCTCT
CGAGCAGTGAAAAGATACCCTTACAGTGaattttaccgaacgtttctgaC
TCTTGCAGTGCAGTTTGATTTcttatcttattttgctgaagccacctgaa
aatgagatgtcgacacaatgtacaaatcaaatcaaaattggTGCGAGTCG
AAACTACTAAAGATATGCATCAGATTTTTATAGTCAGACTTACAATacac
acacccttacagtgtattcaGCTGAACGAAGACCTTCTATCAAAAgtgta
cccttacagtgcatttcgggtctcgaaaaacctaatCTTAAGGGCGGCAC
GTGCCGTAGGTCGGACCAtataagtgcccccccccccctccaagTTTTTA
AACCATTAATTTCGATTCATTACAGGCTGGGAACAAGAAAGCTGGCCAAG
ACATGTCATTTAAAGGCTTTACCCAAGAACAGGTTGAATGTAAGAACTTA
TTTGTAATTCTACTTTAAtaggataaactttcgcggggattaaatttcgc
ggatttcgcggattttggtgccatccgcgaaaatccgcgaaattatttat
tatatttctaaacaaaactcaaaatatgtcaaacaaATACTATTTCTATG
TTTAccggcatcaaagaagcgctaataattgTGTATTTAAACAACCaaaa
tgcatgatttgacagtaaaactcacaaaatcgtgaaaatattgccaccca
atagtgccacccgcgaaattaagtccccgcgaaatttttgaatttcgcgg
ataagcccaaccgcgaaatttaatccccgcgaaagtttatcccattaaag
catttcttctttgattaattcaatctttccttttttcatttttgcttgaA
CTCATTCACTCTCTTACTCTTTTGTACCTAATAAACGCTCCCTTCCTTCT
CAGGTCCTCCCaataattaaaatttgaaacattttccCTGTCCCCTACCA
CGTTTATTAGGCAACTGCGAGTAGACAATATTTTATcctttcgttcgttc
gttcattcattcgttaatttgttcattcattcattcattctttcaGCTTT
tagacaagcattttcagtctTCGATCGTGAGAATCAAGGAAGTATCACTT
CAAACGATTTATTGATCGTCATGAGGAATTTGGGACAAAATCCAACTCAC
GCTGAAATCAAAGAAATGATCGCCGAGATTGACGCTGACGGTGAGATTCT
TTTTCTGGTCTTAACCCTTCAAACCCGggagacgtgtatacacgtcctGA
ATTTACCAATATACTGAGTCCCAGACTTAAGGCTATAACTCTTGATCACT
TGATTTATAAGAGCGCAAGCCGAATGCTtttagaaataaaatgaaaatac
ctTTCTAATGGTACCATTTTCTAACTCTCAGAAGCTACAAGTTTGCATAT
CAGTTCGAAACTTTCacatttcaaaaattgttgggCTCTGGAAAGGTTAA
AGAAAAAACCAGATGAATCGAGTTTCCAAGTCTACAAAATCCTTTTATTC
CTCCTGAGACAACATTCTGAATATAAAtctacatattttttataagcata
acacttataagcatataaaggCTCAGATTTGAcgatttcctaagcataac
atataAGCCAAGTCAGCCTTAAATATTTTTCACGTGGTCAATTCTTTTCT
GCTCAGAAAGGTTTGGAAGTGGTCAAGTAAAAGGCATTCCGCGACTAGCC
ACATTCGNAAGGTTTGGAAGTggtcaaaaaaaggaaaaaaggaatTCCGC
GACTagccacattccactgctcTGAGCCTGACCAAGTGGCAGGcacttgc
ttataaagaaaaggtgtattagaccTAAGTATATTCCTAAACCGAATTGA
ATTTCTAAAAACTAATTATGAGGTGgattggaataagaatgtccatggtt
gataatatttaaaaagttaattAGTGGGGGAATCTATAAAACACCAGAGA
GTATATAAGAAAAGGCTTGCTAGGCATATGCTAAGCCCGGCTAAGTTTCA
GATAATTAGACTCAAGAATAATTAGCCTGGATGTAGCTTGGTATAGTTAA
CTGTCATGTTACCTTAAGGTGTTTTAACCCCGAAAATGtttcttcttatt
ttcagcattttttgatcattttggtcTAATTTGTTAAAACGCATTTGAAT
TAATATAATTATTAAGTTCTATCCTTTGAAAATGTTTCTAAGATTTTTGG
ACATcgaagcctcgtgttcttataaactttgttcttatataataacGTGT
TTGTCTTAATTCTTCACAGGTAATGACAATATCGATAGAAagactgaaat
ttgtttttgaggaaaaatattttagattcATCTATTTTTGAGGCCACCGG
GCCGATTTAATTTTTGACTTCtaggggccacatactgtagcaagttttat
catttgaaaaatacttttgaattttttaagatttttggagtcgaagcctc
gtgttcttataaactttGTTCTCATATAAAAACGTGTTTGTCTTAATTCT
TCACAGGTAATGACAATATCGAGTTCGATGAATTTATCACAATAATGGAG
ACAAAGTTACGGAATACGATTCCTGATGAGCACGTGCTCGAAGCTTTTCA
CGTTTTCGATCGAGATAACAATGGATTTATTTCGCTCAAAGAATTACAAC
ATGTGATGTTTTGTTTGGGTAAGAAATATTTGTGTCAAGTGTAATGAGGG
CTTTAAACATTAactgcaattttcaaaaatgcatgaaaaatttcgaaata
agctctaaaaacccatttttaccagagccaatgttgtttttattggattt
ggagAGTTTGGGTGACAAGTCCAGAAGCCAAATCCACTCAAGATTGAAGG
AAATGAATTTGAAGTCCTCAGGCCTTTTTTTGTCTGAGATTGAAGATTGA
AGGTTCAATGAGTTTTgctcttcaactttttcgagaAGACGTCTATCAAG
ACCATATTTGAAACGTTTAGTTTTCTGCCAAATAACCACTTGTGGTTCAT
TTGGGGAATTTCCAAAGTGTCAAAAAGGCTTATTTTGGCACTTTTGAGGA
ATTTCTACAGACAGTCTACAGACCTTTTGTTAATGGTTGTGGAAGCTTTT
CAAGTTTTCGATCGAGTTAACATAGGGTTTATTTCGCTCAAAGAATTACA
ACGAAATATTTGTGTCCGTCGTAATAAGggctttaaagggacataacagt
actggcgaaatttgtaaacaaactgtatgcagcggatacaaaatcaaaac
aaatgttacatgtcaaaataaaaaatcaaaccaaatatggctaattttga
ttgtccaattgttttacaagtttgttttggacacgtgattttaattgctc
tttttaatgacacgtggttcgcgcaatgttcacattttactactttaatg
tcccatTAAAAAAAGCAGCTGGACAAACATAAAGccagtaccttatcggg
gaaaacttcgtcggggaaaagtgacgaaattttggacaagtgaccaatat
tttccccgacaaaaattttccccggccttaatgcgtttaccaactaccag
caagtgacgaatttttccccaacGAAAATTTTCACCGACGAAGTTTTCCT
CGATAAGGTGTTCTATTTCAATACAGGCGAGGTTCTCCCCATCAACGAGG
TGAAGAAGATTATGGCAGAAGCGGATTTAGATCAAGATGGCCAGCTCAAT
TAcaaaggtgaaaaaaataacttcaaTTTCAAACTTGAGTTTTCCAACGT
GCAAAGGACCcttcaaaacattttctttcctatgttttaagaaaaaacac
gcttttttataagaatttgtaCTATTAATGTCATGGTTATAAGGGAAATT
cgagataaatttcccgaggtcaattttgaaatgttttgaaatttcccgag
tgcaacgagggaaatttaaaacatttcgaaatttgaccgagggtaattta
tccagaatttcacgaaaacaagcatgggattcctggttaatctcatggtt
tggattgaaattctaacaattctgaaagacgtcaaattaacactggaaat
caatctgaaaatttaaaaagaggtgtcgaaaaagtcatagaaacgcaaat
cgagttttaattggatagtattccatttacttaagcctttgaagttaata
agaaagtcgaaaaaggtgatgaatttccaaacgatggaaattacaaaagc
taggagggaaattacaagttcgcggtaaattacaaattaacgtaagcaaa
aaagtcaatcgaatttcaatcaaccatgagattaaaagttaaaaatggca
ttcttaggtttagTTGTCAAATTCCATGATcctgatattcttagcatatc
cttaatttttcgaaagagcatttattgtttttatttttatcacagtgttt
tcaaaaatgaattgaGGAGACTCATAAAACTACTgaattggaataagcgg
ggggggttacgctacggtcgaaaaggtgcatTTGAGACTCTGACTTATTT
TCTATCTATGTTTTTAGAATTCGCAGCTATGATGAGATAGAAGAGACCCT
GGTCGTTGTCCGGCTCCAAAGTAAAGACAAAGAGTGAAGAGAAGTCTATT
TATTTGCAATTATCTATCTATCTTTTCATGAACACGACTTTAATTTATCA
TCCAACACGATTGTTTGCTTTCTTTTCATAAGTTTTCCCAAAaagattgg
gctattccagaaaaaaaaaacgtataccccCTGTAGAGGAGGTCCATAcc
tctgtggctggaaatgctgtaaccctctggaattccaggcaatttcaggt
ttaaacccctctggaattgtgagttttagtaggatttaaaaagctactaC
CATTTgcatctccctatggaattccgccataTATAAAACCTTACCTTCTT
GGAATAGCAGggggtatacgttttttttctggaaaagtccattTGGGGCC
TACTTGGGTGGCACAAAATATATCAATAACGTCCAATGATATTTTAGTGG
ACACAATTACAATTACACTGCGAGActtcaacttttctttttttattttt
tcttaagcCATTTTATGTCAATCAATTTAACGTCCGTTATGAATCTTCAA
TTTACGTCTTTCTCGTCTTTTACGGCGCTTTTCCCTCTTTTTTCgcgttt
tatttattttacgtTTCGAATGTAGCCTAGTCACTTTTACCCCCATCTCT
CTTTACAGTGAAATTGATCAGCTTCTGAGCTTTCTGTTCTTTGACTTTAA
GTCCTTTCAAAGAAACAACAAATTTCATCGGTTTCGAAATCACCATAGCA
CCTCCACCGCCATTATTAAAACCCATGGCTGCCGCAGATTGCTCCTGCGT
TACACCAGGTAGTTCTTTACCAAGATtagctgacgtcagcacttcaTATT
GCATACCAGCTCCGCCAGCTTCGTTGAAACCCATGGCTGAAGCTGATTGT
TTCTGAGACACCCCTGGGTAGTCTTGACCAAGGGTAGCGGACGTCAATAC
TTCATACGGGTTGGGTCCTGCCGCAGGTGGCAAAGGTCTAACGAATTCGA
ATAAACCACCACTACTGCTAGCACCTGCCGCACCTGAAGCTCCCCCTCCA
CCCATTGGTTTGGTTGGTAAATTATATTGCGGATACCCAGTCCCTATAGA
CTGTATCTTGCTCCCGCCTTCCACCTTGAGGCTACCACCTCCGTCATGAG
AATCTCCTTCCTTATAATGTTCAGCATTATGAATCAGGTCTTCAGTACCA
CCGTGTTCCGGACCGTGCCCGTGGTGCCCGGAAGGCAAATGAACCGGTTT
AtcaacattaaaataatcattgtGTAAACGCATATTATGGGCGTGTAAAC
CTTGTAAAGGGTGGCCGCCTTCAACTGTCATTACGTGTTGTCCGCTTCCG
CCCTTGATGGAAGTTACCTCGTGTTCTAGGATATCCGCTTGCATGGACAT
GAGTTGAGCATTTTGTTTAAGCGCATGCGCCTGAGATAGTAAATACTTTT
CTTCGTTCTTATGTGAAGGGACGGTGTTTGGGATGAGCATGAGGTTACAT
CCTGGTTGTGGTTGACATGGAGCATGCGCAATTGATGTTTGGTGAATGAT
TTCGTCGCCGAATACTGGGCCGTTTATAGCATTTATGTCTGTACGCAGTT
GCGCTTTCGATTTTAGTGTATTAGTTAACCGTGAGACTTGTTTATCGTCT
ATACCTGTACGCAGTTGCGCATTCGATTTCGATCGGTTAGTTAAGTGTGG
GTCTTTTAAAACACCGATGTCTGTACGCTGTTGCCCGTTCGATTTCGATC
GGTTTGTCAAGTGTGAATCTTTTATAGCATTTATGCGTGTGCGAAGTTGC
GCGTTCGATTTCAGTCTATTAGTTAAGCGTAAGTCTTGTTCATTATCTAT
GTCTGTGTCTATGTCTCCATGtgttttatttgatttaaagtcttttttaa
cattgatATTTATAGGGAGCATTGGCTTTGATTCCtgtatttttgttgtt
tttgagttTTCGCTATCAGAGATGCCTGTGCCAAGCGTAGAGTTCGATCT
TCTTCTATCTGATGGTAAGAATCTAGGAAAAGTCGTGTTccttttcaatt
ttccaaaagGATCATGTTCATTTTGAATACTTCTATTTTCACGTAGTCGT
GGTTCATACGTTTTCGACTGAATAAACTGTTTTGTGGATAAGTCTTTTAT
AACAGTTGTTGATTGGTTATTATTTTTGTGATGACGTTTCGTATTGTTTG
TTGTATGGTTTCTCTTTAGAACAGGGTGTTGTACCTTAGCCTGCAGTCCA
TCCTTTAAACCTGTTTCAATACTTTTATCATCGTTCTGTCTTGTCAATGT
TGTGTAGGCTACATTGGGATCATCTGATGGTCTATGAGCTCCTGATTCTT
CTATATCTTCGTCATCGAAAGGATTTTCGAATTCGTTTTTCGTGGAATCC
GATATGGCATCAGATGTAAGATTCCTTGTTTCTAGTCTAATGTTTTCCTC
TCGGTCTACATCACAACCGTCGCCATCCTCATCATTATCAGGGTCTGCAT
CGTTTTCCTCANATTCCTTGTTTCTAGTCTAATGTTTTCCTCTTGGTCTA
CATCACGACCGTCGCCATCCGCATCATTATCAGAGTCTGCATCGTTTTCC
TCGAAAAAGTTGTCCTCCAGTTCAACAAAATGATGATATAACGCTTGTCG
TCTATGGATAACATGTCTGTTGATTTTCATTCGTGCTTTGATCAGTGATT
TCTGGAGAAGAAATGAAGCAGCCTCTTCTTCGGAGTCCACCTCTGACc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038191XLOC_038191Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060788-exon-scaffold_349-1491911889:465452..465474TCONS_00060788-exon-scaffold_349-1491911889:465452..465474Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:465452..465474TCONS_00060788-exon-scaffold_349-1510915933:465452..465474Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:465452..465474TCONS_00060788-exon-scaffold_349-1575043694:465452..465474Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:468427..468490TCONS_00060788-exon-scaffold_349-1491911889:468427..468490Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:468427..468490TCONS_00060788-exon-scaffold_349-1510915933:468427..468490Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:468427..468490TCONS_00060788-exon-scaffold_349-1575043694:468427..468490Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:469098..469241TCONS_00060788-exon-scaffold_349-1491911889:469098..469241Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:469098..469241TCONS_00060788-exon-scaffold_349-1510915933:469098..469241Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:469098..469241TCONS_00060788-exon-scaffold_349-1575043694:469098..469241Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:470558..470719TCONS_00060788-exon-scaffold_349-1491911889:470558..470719Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:470558..470719TCONS_00060788-exon-scaffold_349-1510915933:470558..470719Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:470558..470719TCONS_00060788-exon-scaffold_349-1575043694:470558..470719Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:471678..471758TCONS_00060788-exon-scaffold_349-1491911889:471678..471758Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:471678..471758TCONS_00060788-exon-scaffold_349-1510915933:471678..471758Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:471678..471758TCONS_00060788-exon-scaffold_349-1575043694:471678..471758Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:472569..474181TCONS_00060788-exon-scaffold_349-1491911889:472569..474181Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:472569..474181TCONS_00060788-exon-scaffold_349-1510915933:472569..474181Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:472569..474181TCONS_00060788-exon-scaffold_349-1575043694:472569..474181Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1491911889:474314..475349TCONS_00060788-exon-scaffold_349-1491911889:474314..475349Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1510915933:474314..475349TCONS_00060788-exon-scaffold_349-1510915933:474314..475349Clytia hemisphaericaexon
TCONS_00060788-exon-scaffold_349-1575043694:474314..475349TCONS_00060788-exon-scaffold_349-1575043694:474314..475349Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:465452..475349 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.171071	0	0	0	0	0.115501	1.47761e-08	0	0	3.60329e-07	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00060788 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.454e-46
Identity = 76/142 (53.52%), Postives = 108/142 (76.06%), Query Frame = 3 
Query:   66 FTQEQVESFRQAFSVFDRENQGSITSNDLLIVMRNLGQNPTHAEIKEMIAEIDADGNDNIEFDEFITIMETKLRNTIPDEHVLEAFHVFDRDNNGFISLKELQHVMFCLGEVLPINEVKKIMAEADLDQDGQLNYKEFAAMM 491
             T+EQ+  F++AFS+FD++  G+IT+ +L  VMR+LGQNPT AE+++MI E+DADGN  I+F EF+T+M  K+++T  +E + EAF VFD+D NG+IS  EL+HVM  LGE L   EV +++ EAD+D DGQ+NY+EF  MM
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00060788 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM36.454e-4653.52Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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