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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060779 ID=TCONS_00060779|Name=TCONS_00060779|organism=Clytia hemisphaerica|type=transcript|length=1136bp
GGAAAACAAGATAAGCTCATTCACATTTAGACATTCACaggctggtcaga
agacaacatgagagcgactgtattcacttcattgttaTTCAcatttgttt
tctttatttaattCCAATATAATATGAAAGAAGAATGGGCAATATTCCAG
TTATTCACGAGTTTGTTACTTGTGTTCAATCACTTGGTGACGCTATAGCG
GGCGACACGAAATCCGCACGCAAACGGTGGGATACGTACGCCAAAGAGAG
CGTCATCGGATCTACCGTGGCAGGAATCTACTATAGTGCACGGAATGAAA
AAAGTAGAgcaaaagagtatttcaaaggAACTGGGAGGGCATTTGGGAAA
GCCATCCTTGGTGGTGGCATTTTAAAGAGTGTTCCATTGTTTCATGAGCT
TGCGACAGCTGGAGAATCACTCGGTGACGTCATCGGAGGTGGTGATACAA
AGTCAGCACGTCAGAGATGGAAAAATTATGCAGAGAACAGCGTCATTGGT
TCATTTTGTTATGCTATACACGAGTCAAGAAAAGGTCGAGAAGAACACGC
tcgaaaattgatgaaaaatagtGGAAAGGCTTTAATCAACGCAGGGGCAA
CAGTGGCAGCTATTGCACTCACATCAACTACAGCTGGTCTGGCGGCACCA
TTAGGAATGGGTGCTGCTGCACTGGCTGCTGGATCAGTGGGTGCCACAAC
TTCAGTAGCATCAACCTACCTTGGTGGAAAATTAAGTGGTGAAAAGATAT
CAACGGGTGATTATTTTGGTGCAGCTCTCATGGGTGGTATTGGTGGTGCT
TTACAAGGAGCCATGGAAGCAAGAACCTACAATAGAACAATGCAAGCTTT
AGAACAAGGAGAACGAATGATCGGAGCAGGAGAAGACGCTGTTGAGATGT
CAAAAGCAAGAAATGATGGCGCAGAAGGAACAGTCAGCTCTAAGATGTAC
TCAAAAGAAGGAGATACAGCAACCTCCTTTTTGGCTCATGGAAGCTAGAA
TTGCTAAAGATTTTCATTGTGATTATTTTCGTTCAACCTATTTCTCGTTt
ttaccactgacctttatatatccctggaccaagtttctaaatcccggcca
agcaaaatctttgatcggagttttttgaaaagtggt Run BLAST on NCBI transcript from alignment at scaffold_349:395928..397433+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060779 ID=TCONS_00060779|Name=TCONS_00060779|organism=Clytia hemisphaerica|type=transcript|length=1506bp|location=Sequence derived from alignment at scaffold_349:395928..397433+ (Clytia hemisphaerica)
GGAAAACAAGATAAGCTCATTCACATTTAGACATTCACaggctggtcaga
agacaacatgagagcgactgtattcacttcattgttaTTCAcatttgttt
tctttatttaattCCAATATAATATGAAAGAAGAATGGGCAATATTCCAG
TTATTCACGAGTTTGTTACTTGTGTTCAATCACTTGGTGACGCTATAGCG
GGCGACACGAAATCCGCACGCAAACGGTGGGATACGTACGCCAAAGAGAG
CGTCATCGGATCTACCGTGGCAGGAATCTACTATAGTGCACGGAATGAAA
AAAGTAGAgcaaaagagtatttcaaaggAACTGGGAGGGCATTTGGGAAA
GCCATCCTTGGTGGTGGCATTTTAAAGAGTGTTCCATTGTTTCATGAGCT
TGCGACAGCTGGAGAATCACTCGGTGACGTCATCGGAGGTGGTGATACAA
AGTCAGCACGTCAGAGATGGAAAAATTATGCAGAGAACAGCGTCATTGGT
TCATTTTGTTATGCTATACACGAGTCAAGAAAAGGTCGAGAAGAACACGC
tcgaaaattgatgaaaaatagtGGAAAGGCTTTAATCAACGCAGGGGCAA
CAGTGGCAGCTATTGCACTCACATCAACTACAGCTGGTCTGGCGGCACCA
TTAGGAATGGGTGCTGCTGCACTGGCTGCTGGATCAGTGGGTGCCACAAC
TTCAGTAGCATCAACCTACCTTGGTGGAAAATTAAGTGGTGAAAAGATAT
CAACGGGTGATTATTTTGGTGCAGCTCTCATGGGTGGTATTGGTGGTGCT
TTACAAGGAGCCATGGAAGCAAGAACCTACAATAGAACAATGCAAGCTTT
AGAACAAGGAGAACGAATGATCGGAGCAGGAGAAGACGCTGTTGAGATGT
CAAAAGCAAGAAATGATGGCGCAGAAGGAACAGTCAGCTCTAAGATGTAC
TCAAAAGAAGGAGATACAGGTTAAATAAGATTTCATTTGCACGTTCacgt
ttctttttataagaacatccaaaatctttaaagccatctgattttcttaa
ctttttaagttttaagcctgaaaatattcttaacatgttcttaatttcac
ctattttggtctattttcctaagaaaatgggtgtttcagagtccgcaaag
ccttgtgttcttatatagtttgttttttgaagtgctCAAGTGCTGGGTTA
AGCTTGGCTATCCCCTAAGGAAATTTTATACTTCAGTTTTTACTAAACAT
ATATGGTTTTCTGTATAGTACAAAATTGACTAAGTAGATCGTAATTGTCG
AtagtaaaaaattttaaaactattACATTTCTATTTAAGCAACCTCCTTT
TTGGCTCATGGAAGCTAGAATTGCTAAAGATTTTCATTGTGATTATTTTC
GTTCAACCTATTTCTCGTTtttaccactgacctttatatatccctggacc
aagtttctaaatcccggccaagcaaaatctttgatcggagttttttgaaa
agtggt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060779-exon-scaffold_349-1491911889:395928..396896 | TCONS_00060779-exon-scaffold_349-1491911889:395928..396896 | Clytia hemisphaerica | exon |
| TCONS_00060779-exon-scaffold_349-1510915933:395928..396896 | TCONS_00060779-exon-scaffold_349-1510915933:395928..396896 | Clytia hemisphaerica | exon |
| TCONS_00060779-exon-scaffold_349-1575043694:395928..396896 | TCONS_00060779-exon-scaffold_349-1575043694:395928..396896 | Clytia hemisphaerica | exon |
| TCONS_00060779-exon-scaffold_349-1491911889:397267..397433 | TCONS_00060779-exon-scaffold_349-1491911889:397267..397433 | Clytia hemisphaerica | exon |
| TCONS_00060779-exon-scaffold_349-1510915933:397267..397433 | TCONS_00060779-exon-scaffold_349-1510915933:397267..397433 | Clytia hemisphaerica | exon |
| TCONS_00060779-exon-scaffold_349-1575043694:397267..397433 | TCONS_00060779-exon-scaffold_349-1575043694:397267..397433 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_349 | supercontig | scaffold_349:395928..397433 + |
Blast
The following BLAST results are available for this feature:
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