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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060744 ID=TCONS_00060744|Name=TCONS_00060744|organism=Clytia hemisphaerica|type=transcript|length=1286bp
tcttataaaaagatgtGCATTAACACCAAAATAATAGCATCTAAAAGCGA
CCAGGTATCCAagtaaccaaaacaaacaaatccTAAAAATAGTGAAAACA
AAAAGAGCCAGCAATGCCAATAAAACATGTGAAACAtcttaaaatagaat
ttttcaaTTATCGCAGATATGTATCAGAATCTATTGAAATCCACCATACG
GGTCCAGGATCTCTACTAGTACTGGTTAGCCTTTCAATTCAACATACCAT
GCAATTCGttctcatacacgtttttttttaaagaacatccaaaatttttg
aagccttcgggtgttcttaattttttgagttttaagcctagaaatgttct
taacatgttcttattcttATTTTCCTAAGAGTCCtaaagcctttaaaatg
ttcttaacttattcttaatattttggccatcgaagtcttatgttctcata
tagatttttcttagcaaaaaacgtgtatttcgcaggaaataaaatcaatt
tgtcaaatttagCCATTTCAGGTTCAACATCattgtttaaaaattatttt
tattttgatgtcgCTTTTAGCCTCACGTGTTCTTACAAATACCGGGTGAT
tcaaatttgggtcaaaaactGTTTTGGATTTGTACACAATCAtctcatta
ttattttttctgattcttttgCACAATGATATGAAATGGTAAATGTAATT
CTCATATTCTAAAGGATAGTGTAATCAATTACGCACTATGACAAAGTGCT
CAGCCAATCATAGATGTTACTTTTATAATAGCTAATTAAAGGCATGTCAC
TAACGGCACATAGCTAATTACCTTCTTTATAATTATACACCAGAAGCTAT
TTGTGTAATTATGAACAATAGTATGTACATCCATCTATTATTTATGTTAT
CAAATTATGAGCTGATTATTCCGGTGTTTGTAAGACCTGATTACCGGAAT
CCTTCCGGCTCCTTACAATACGCTTTCAATCAACGGACATGGCCGTGTAA
ACATGCTCTTATGCATTTCTTATTATTTTCTAATGATTGTTTTTGATTTG
CTTTGTTTCGCAATTAGTGTCCGGGTTTGTTACGTCTTTCCCCCACTAGA
AAGAAATTCGAGAAAGCTCTCCGAGGGAGTACATTACTATCTACTGATCT
CTCTAATAATTATCTATGGTCCCTGTTTTTCCCAAGAAATTCCACCGAGA
AATTCGAGAAAGAATTGCATGAATGAGTTAAATTTGGATCCTCATGGGAA
GCCTCGTATAAACGCTTCACATCAGCTCAAAATACG Run BLAST on NCBI transcript from alignment at scaffold_348:61632..62917 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060744 ID=TCONS_00060744|Name=TCONS_00060744|organism=Clytia hemisphaerica|type=transcript|length=1286bp|location=Sequence derived from alignment at scaffold_348:61632..62917 (Clytia hemisphaerica)
CGTATTTTGAGCTGATGTGAAGCGTTTATACGAGGCTTCCCATGAGGATC
CAAATTTAACTCATTCATGCAATTCTTTCTCGAATTTCTCGGTGGAATTT
CTTGGGAAAAACAGGGACCATAGATAATTATTAGAGAGATCAGTAGATAG
TAATGTACTCCCTCGGAGAGCTTTCTCGAATTTCTTTCTAGTGGGGGAAA
GACGTAACAAACCCGGACACTAATTGCGAAACAAAGCAAATCAAAAACAA
TCATTAGAAAATAATAAGAAATGCATAAGAGCATGTTTACACGGCCATGT
CCGTTGATTGAAAGCGTATTGTAAGGAGCCGGAAGGATTCCGGTAATCAG
GTCTTACAAACACCGGAATAATCAGCTCATAATTTGATAACATAAATAAT
AGATGGATGTACATACTATTGTTCATAATTACACAAATAGCTTCTGGTGT
ATAATTATAAAGAAGGTAATTAGCTATGTGCCGTTAGTGACATGCCTTTA
ATTAGCTATTATAAAAGTAACATCTATGATTGGCTGAGCACTTTGTCATA
GTGCGTAATTGATTACACTATCCTTTAGAATATGAGAATTACATTTACCA
TTTCATATCATTGTGcaaaagaatcagaaaaaataataatgagaTGATTG
TGTACAAATCCAAAACagtttttgacccaaatttgaATCACCCGGTATTT
GTAAGAACACGTGAGGCTAAAAGcgacatcaaaataaaaataatttttaa
acaatGATGTTGAACCTGAAATGGctaaatttgacaaattgattttattt
cctgcgaaatacacgttttttgctaagaaaaatctatatgagaacataag
acttcgatggccaaaatattaagaataagttaagaacattttaaaggctt
taGGACTCTTAGGAAAATaagaataagaacatgttaagaacatttctagg
cttaaaactcaaaaaattaagaacacccgaaggcttcaaaaattttggat
gttctttaaaaaaaaacgtgtatgagaaCGAATTGCATGGTATGTTGAAT
TGAAAGGCTAACCAGTACTAGTAGAGATCCTGGACCCGTATGGTGGATTT
CAATAGATTCTGATACATATCTGCGATAAttgaaaaattctattttaaga
TGTTTCACATGTTTTATTGGCATTGCTGGCTCTTTTTGTTTTCACTATTT
TTAggatttgtttgttttggttactTGGATACCTGGTCGCTTTTAGATGC
TATTATTTTGGTGTTAATGCacatctttttataaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060744-exon-scaffold_348-1491911889:61632..62917 | TCONS_00060744-exon-scaffold_348-1491911889:61632..62917 | Clytia hemisphaerica | exon |
| TCONS_00060744-exon-scaffold_348-1510915933:61632..62917 | TCONS_00060744-exon-scaffold_348-1510915933:61632..62917 | Clytia hemisphaerica | exon |
| TCONS_00060744-exon-scaffold_348-1575043694:61632..62917 | TCONS_00060744-exon-scaffold_348-1575043694:61632..62917 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_348 | supercontig | scaffold_348:61632..62917 . |
Blast
The following BLAST results are available for this feature:
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