TCONS_00060742 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060742
Unique NameTCONS_00060742
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060742 ID=TCONS_00060742|Name=TCONS_00060742|organism=Clytia hemisphaerica|type=transcript|length=135bp
GTTGACAAATCTTTTGTAATTTCTTCACTTAAAACTTTCCACTTCATTCC
AAACCTTTCAACATCTTGTTTGCCAAGGTGGTAATAAATGacagcttttt
gaaaaaatttcttcaaacttttcatttctttaccA
Run BLAST on NCBI

transcript from alignment at scaffold_348:19992..20126

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060742 ID=TCONS_00060742|Name=TCONS_00060742|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at scaffold_348:19992..20126 (Clytia hemisphaerica)
TggtaaagaaatgaaaagtttgaagaaattttttcaaaaagctgtCATTT
ATTACCACCTTGGCAAACAAGATGTTGAAAGGTTTGGAATGAAGTGGAAA
GTTTTAAGTGAAGAAATTACAAAAGATTTGTCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038161XLOC_038161Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060742-exon-scaffold_348-1491911889:19992..20126TCONS_00060742-exon-scaffold_348-1491911889:19992..20126Clytia hemisphaericaexon
TCONS_00060742-exon-scaffold_348-1510915933:19992..20126TCONS_00060742-exon-scaffold_348-1510915933:19992..20126Clytia hemisphaericaexon
TCONS_00060742-exon-scaffold_348-1575043694:19992..20126TCONS_00060742-exon-scaffold_348-1575043694:19992..20126Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:19992..20126 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060742 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top