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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060730 ID=TCONS_00060730|Name=TCONS_00060730|organism=Clytia hemisphaerica|type=transcript|length=473bp
TTGTGTTTTCGAGAAAATTGGTTGGCGTTGATCTGACTTCAATTGGAAGC
TTTGAGTATAATAACATCGCACTACTGTGAAAAAATACGAAATATCACAA
AGTTGCGGAGCTATGCCATTTGCCGAACTGCATGATGTAATGCTAAGCAC
TCTATAGTTCAAATAatggagaaaaataaatatacccATATCAGGAGAGA
TAAATGTCTAATTCTACGTATTATAGAGTGTTTTTTAAAAgcataatttg
aaaataatctaaaagttttctaaaatttaaatgaaatgaaattgcaATCA
TTACACCTTTTTCGAAACTGAGGTCATCTCAAAATTCGAACTTCGAATTT
GGAAATAATTTCCATCTAGCAGGTACTTCGTACActgttttcaaggtttt
tattaatatttagtttaaagtctgttcacgataagtgtgcactctttttt
cttttacctataacttttgaagg Run BLAST on NCBI transcript from alignment at scaffold_348:423974..425389- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060730 ID=TCONS_00060730|Name=TCONS_00060730|organism=Clytia hemisphaerica|type=transcript|length=1416bp|location=Sequence derived from alignment at scaffold_348:423974..425389- (Clytia hemisphaerica)
TTGTGTTTTCGAGAAAATTGGTTGGCGTTGATCTGAGTTTTAAATCACAA
GCTTCAATTGGAAGCTTTGAGTATAATAACATCGCACTACTGTGAAAAAA
TACGAAATATCACAAAGTTGCGGAGCTATGCCATTTGCCGAACTGCATGA
TNAGATACCAAATTTATAAAGAACGAAGAATTCCTTCCAAAGTTATAGCT
AAAAGAAAAATGAGTGCACACTTATCGTGAATAGACTTTAGTTTCAAAAA
AAGGTGACGGGTGAAATTAAATTCAGAAAATTTTGCAATCTTTTGAAAGA
TTGAATGCGAATAAAGTAAAGCAAAAAGAGCAAGAAAAAAAACAAGTCAA
CTATAAAGTTGGGAAAATCGGTCTGCAATTTAAATAGAAGTGAAGTGAAA
TCAACTTATAAATACATAAACAATTATATATATGTTATTCCGGGGTGACA
CCATAGATATCATTCATACACGAAAACACGAATAAAATTGATTAACTTTT
TAACGCTTTCTAACATGAGGGCGTCCTGGCCAAGATCCTTAACTACAATC
ATGGTCGAAATATATTGAGAATTCCGGTTATTTTAACGTTTTTCAAGATT
TAAAGTTCCGGCGAGAAAGTCGATTTTGGGCTATCTCTTTANTCTAAGTA
ATATAAATTATACACAAGCTCAATAATAATCTGTTCGGGAAATTGCATAT
AATAATAGTGCTGCGAAATTCCGCAATTTTAGCGTTGTCAAACTCTTTTC
CGCTGCCAAATTTGACAACGCTTGCCAAAAACAGGGTCGTAGGGTAACGA
ACGGGGTCTCGAAATCATGTGAATTTTGTAGAATAACCCAAAAGTAAACT
TTGAATTTCTAAGGATTTTTCACAATCATTCATGATAGTGAGGCTACTTC
AAAAAAGCGAGAGTTTGCCTGATTTTGCTTGTGTTTTCGAGAAAATTGGT
TGGCGTTGATCTGAGTTTTAAATCACAAGCTTCAATTGGAAGCTTTGAGT
ATAATAACATCGCACTACTGTGAAAAAATACGAAATATCACAAAGTTGCG
GAGCTATGCCATTTGCCGAACTGCATGATGTAATGCTAAGCACTCTATAG
TTCAAATAATGGAGAAAAATAAATATACCCATATCAGGAGAGATAAATGT
CTAATTCTACGTATTATAGAGTGTTTTTTAAAAGCATAATTTGAAAATAA
TCTAAAAGTTTTCTAAAATTTAAATGAAATGAAATTGCAATCATTACACC
TTTTTCGAAACTGAGGTCATCTCAAAATTCGAACTTCGAATTTGGAAATA
ATTTCCATCTAGCAGGTACTTCGTACACTGTTTTCAAGGTTTTTATTAAT
ATTTAGTTTAAAGTCTGTTCACGATAAGTGTGCACTCTTTTTTCTTTTAC
CTATAACTTTTGAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060730-exon-scaffold_348-1575043694:425354..425389 | TCONS_00060730-exon-scaffold_348-1575043694:425354..425389 | Clytia hemisphaerica | exon |
| TCONS_00060730-exon-scaffold_348-1575043694:423974..424410 | TCONS_00060730-exon-scaffold_348-1575043694:423974..424410 | Clytia hemisphaerica | exon |
| TCONS_00060730-exon-scaffold_348-1510915933:425354..425389 | TCONS_00060730-exon-scaffold_348-1510915933:425354..425389 | Clytia hemisphaerica | exon |
| TCONS_00060730-exon-scaffold_348-1510915933:423974..424410 | TCONS_00060730-exon-scaffold_348-1510915933:423974..424410 | Clytia hemisphaerica | exon |
| TCONS_00060730-exon-scaffold_348-1491911889:425354..425389 | TCONS_00060730-exon-scaffold_348-1491911889:425354..425389 | Clytia hemisphaerica | exon |
| TCONS_00060730-exon-scaffold_348-1491911889:423974..424410 | TCONS_00060730-exon-scaffold_348-1491911889:423974..424410 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_348 | supercontig | scaffold_348:423974..425389 - |
Blast
The following BLAST results are available for this feature:
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