TCONS_00060646 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060646
Unique NameTCONS_00060646
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1468

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060646 ID=TCONS_00060646|Name=TCONS_00060646|organism=Clytia hemisphaerica|type=transcript|length=1468bp
GGAAGCTGGAAGAAGACTGTCAGCCGCAgcctgacagcaaaactttttac
aaagtCTGTTACACTAGAGTTTCCCTCTCTCTGTCTAGTTTTGTACATGG
CTGATGTCAATTGGATCTGATCAATGAGCAATAAACCAAAAAGACAAAGA
TGGTACCTGGGTGGACCAGCTGGTGCTGGAGCGGTCATGTTCACTCATCC
ATTGGATCTGCTCAAGGTTCACCTACAGCAAGCAAAAACAACCAATAGAG
GATTAATCTCAACTGCTTTGAAAGTCATCAAGAATGATGGTTTCTTAGGG
TTGTATGGTGGTATCAGTGCTTCCATATTACGACAGCTCACTTACAACAC
AACACGTTTTGCCTTATATGAAAGACTCAGTGCAAAACTACTGGAAAATC
GTAATGATGCCTTACCGTTTTATCAGAAGCTTGCTATTGGTTGTGTAAGT
GGGTTTGTCGCTGGTGTTGTTGGCAATCCTGCAGACATGGTTCTGACCAG
AATGCAAAACGATGTCAGACTGCCCAAAGATATGCGAAGAAAcTACAAAC
ATGGGTTTGATGGTATTTATCGTGTGGTAGTTGAAGAAAGATTCCACACG
TTATTTGCTGGTGTAACGATGACGGCAACGAGAGGTCTTTTCATGACTCT
TGGACAGGTGGCAACTTATGACCAAACAAAACAGATACTCATTATGACAG
GATACTTCAAAGATAATGTCCCTACGCACGTACTTGGGAACGATAGCGAC
AAGTATCACACAGCCgtttgacgtcatcaaaacacgGATGATGAATGCTA
AACCTGGTGAATATCAGGGTATTTATCATTGTGCGAAAGACATATCAAAA
GATGGTATCTTCAAAGGATTGTACCGAGGTTTTGTACCACGCTGGATCCG
CCTTGGTCCGCACACCATCCTAACATGGGTATTTCTTGAACAATTACGTA
AGGCGTTTCCTTTGAAAAACGATTAATACTAAGGGGTGATACCGTGTGTA
TAAAGGTCTATGTAAACTGTACAACATATTACCAGGCTATAAATTTACCG
AGTATCGGCATGAAACCATAGCCTTTACAAGGAATTTTTGCTGTGCGCGG
AGCAGTTAGGATCTGTTTGGATATTAGCCATGTTTATTCTGCTTTTGTGC
CCACGTAACGTTACATGAATGTCAAAACGTCTTTATCGCGGGTCGGGATC
TATCTacaattaaggtcataatatttgagaaaaaatgaaaattccccagg
aagttttgaaaccacaatcgatttataagtgctctaaagtataggttcga
agggtagagttttaacgctagacttaggacttacgaccttaggatctgac
gatctaaaagttcaaaaatagtccaataagactcagaatatagcctggaa
gtctgccaacccatcccaaatcgaaatattcgattaagttaaagagatag
cccaaaatcgactttctc
Run BLAST on NCBI

transcript from alignment at scaffold_348:404360..421900+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060646 ID=TCONS_00060646|Name=TCONS_00060646|organism=Clytia hemisphaerica|type=transcript|length=17541bp|location=Sequence derived from alignment at scaffold_348:404360..421900+ (Clytia hemisphaerica)
GGAAGCTGGAAGAAGACTGTCAGCCGCAgcctgacagcaaaactttttac aaagtCTGTTACACTAGAGTTTCCCTCTCTCTGTCTAGTTTTGTACATGG CTGATGTCAATTGGTAAGATTATTTTCGTGATGAACCCGGAACCCCCTTT CAGCCTTTACTTTGTatgacgataattaagcctacaaacACCGAGaaaca agccgtatatgtacaagccgtatatgtataaaagttgcgaagcgatccag agccacctcgattcgcaagttgcaagcaaaacataTAGTTCCAAATAATA ggaatatttcatattttcaaaaaaaacggaatttataactgaaaatgttt aaaaggaaaaaaactttcaaaacaagaagcAATTTCATATTNCGGAATaa ctgaaaatgtttaaaaggaaaaaaactttcaaaacaagaagcAATTTCAT ATTATACTTAAGTTCAACAGATTAAAAGGATGGAAAAATGTcttgtatat ttggaaaaaaagttttttatctgaAAGAATGCCCTAAGGGAAAAAAACTC CACTCTCAGAAGCCATTTTCCATTCCAAAAGCATTCTGAAAAGTTATATA ACATTTTATAAGGCCACAATCACAAATAACTAGTTCGCGCTGTCCAACTG ActgataatatttttcttaattttctgaaCACTGCAATACAGTAgctatt tatttaaaattttcgtTGGATTTGATTTCTGCCCAACACATagtttgaaa atccaatttttctgaCGTTTCAGCTGCCGACCAAACAATCAATTAATTTC TTAACCTAAAAACGACGCAAACCAGCGCAAAAACCAGTTATTAGTGATGG TGACctattttcagaaaatatatatacctttaatttggcggatggccgaa aaagttttttagatggaatttaatttggcggatggacgaaaaaactaaat ttggcgggaatttaatttggcgtttgctgaaaattttatccttaaaatgg cgtaaaaacagcaaaaaaaaatgcaaaaacaccttaaaagagatcatatt ttcaaaaagtttaatttggtgggaatttaatttggcggatggcggaaaaa agaaattttggcgggaacttaatttggcggattctggccaaatccgccaa atccgccaaattttctttccgccaaaatttcttcctttaaggtatcaaaa aggtaaaaaaaaaatttcatactgTAACAGGAAttatttccttattttca attagtacgtaaaaaaattgcaattgtaatcaacaaaagtttttcacatt ttaaacgtggaagaCAATATTATATACTGTAGTTGACGACAAAGGTTTTC CATGTTTTAGATgcatatcaaaaaaaaaattataagctcaggcgaaaatt taaaaagtgtagTTTTACCGGAAACCGGTCCagtgagaaaactttttttc tgacccggtcgcaaaaatatatacttaaATGCGATAAACTTTTGtggaga ttaaattttgcggatttcacGGATTTGCGTGTTATCCccaaaaatctgca taattaaaTCCCATTGAAAATTTGAGTAGGCCTTAtcagcaaaatatttc taaacaaaactcaaaaaatgttaaataaatactttttgaatgtttaatGG CATNCATTAGTACTTGATACATAGAgattacttcatactgtttgtgtaca taaaagttatctttaaagttctatttcaatgatcttaagttatcaaaaat agtaaaacaaattttttccagCAAGCTGCATGTTctcatgacaaaagttt tccaaattttgaacacatgcaatgaaaagttcatggttcgctacaaaagt tttccatatttTAAACCCATTCCGAAGCGAAGATAATTTCATATTTCACG ACACATTTTCCACATTATAATCAAAACGGAAGATAATTTCGAAGTTCAAT GAAAGGTGATAATTCCAATTGTTTACATCCAGCTTACTTTTTCAGAGGTT GACATAACATTATTATTCATCAGGCCGCCTGGGCTGGCGGCTGTGGTTGT CAGCTTCAAAAGTTGGAAATAAGCCGCTACTGTATATAATTTCCCCCTCA AAGAGGTTTCAATTACCAGTTGAGTGTCATTGTTGTAGAAGAAGCACCAA GTAAAATTCAATCTATATAGTAAGGCAAGGAATTTCTCCAGACTTTTTTA AAGCTGCAAGTGTTTCATTTTCAGGCACAACATGGTCAGATTTCTCCAAA AATATTCAGTCACTAGCCCTGTTACAATTCATTTTAACATGNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTTATCATCCACCATTTCTTGTGCCAATCAGACAAAAAACA TGATCCAATTCGACTCTTGAAGcatgaaaatcgaagaaaaataaCCGAGG AGCAGTATTTGTTGTCAATTTGTTGCCGCCATCTTAATGTTTTGACGGCT AGAAACCAGTATGGTCTAATCATCAATACccttccgaaccgggcgacgtt ccCCGATCTGCAAGGAGAATAAAGCACCGCACTGATGTTTTCCCGCGACG TGTCTTCAAAAATAACGTTGTCCGTCTCAAAAAAAGGCACTCTACTGTTC TCTCGCTCGGAGCTCGATTGAATATGAGCCATGTAGTCATACACGGAATT TCAAATTCGAATACGTCAAATTTAATGTAATGGAGATAATTTTCTCTATC ATTTCCGGGAATATCCTTCATATTTTATCCCCTTAATATTCATTGTCGCG CGACTCGGAGATACTAAACGTTTTTCCCATCTCCTGCCTTATAGATGGTT GAAAGAATGgaaagttaaaggtacgcacacacgatagcaaaactgcttcg ctcatgtacattcgcttcgcaaaaacccaacatagaacaggtgtattttg taatgcaGAATATGATagtgtgaatctttttgaatttctatgttaggatt ttttctcaatgccctgTAACTATGCTcattgctaagaccttatgttaaaa acgaaagcgattacggcaaaaattcatcaaaaatattgatttttcgtaat agctcaaatattgatacttgtgATACGTCTTGTtatttcgacatagctgt aggctggaaTACGCGATTGATATCGACAATCAGTCCGTCACAAACAGCGA CATTTCGATATCACAcagaagcgcttcaaaacaccagcttttttggagtt ttgtctcgtttacccaaacgcttcaatctcgcgtaggcttaggagtcaag actagaacccccaatacgagacatttgcctgaccgaaaaaaaatcatcat catcaattttgttaattgtcagaatcgtttactcactggaaacgcaactt tttgaagtttcattttttttcgctTACAgtgcttcatttaaaaaaaacga agatgaaaagttaccatcaatcccgcgagtaaaagaaagtattccgacta gtctacgaaaaatGTATATacaatataataaaactattatatATATTGAC AATATTGACTCTTAGCCTAGACTAAAACTCccatatcaggattagaaact aggctagtcttacctctacCTTTTCCTTTGCAGCAACAAGctgtatatgt ataaaagttgtgAAGCGTTCCAGAGCCTCCTCACCTTTAATGACATGCAA ACGCCATATATTTTATAACGACAAACGAGCTGTTTGACTTTTACGTTCAC TGTagtctttaaagatttttcaaaaacccTCCCATTTGCAACATTTTTAT AGTCcttctcttttaaaaaaaatatctgtAGACATCCCTATGTTGCTGTC ATGGCATTGGCCTATTACAGGCGATGTCAACCGAACGTTATGGAACCAAT TTTCGTAATGGATCAATCGAAtttcatcgaactaatcgaacaataaatgt tcgattaccgaaccaaatcgaacagtaatcgaactttaccgGAAATAACT GTTTGATTATAGTTCAGTCACaaaaatccttgcatttgcacaggGTTCGA CATGCGGCAAATGCAACGGGTCGAAAACCAAAGTGATGAAAAAACCCCGT GCAAATACACTCAATCACTTCAACTTGTTGCATTTACACAgagtggaaaa atgtttcacttgattataaaaaaatgcatagatcaaaattttaacccgta gacataaattttctaaaaaggctAATAAAGAATCTTCTAAAGAAATAATG AAATGCCATTCGTCTTCGTTTTAtgccattttcattttaaagttgaGATT TGTGAATTTTCACGCATTTTGCCTTACATgttctagctcatttgcacagg gttgggcgaacccgaaaaaaatttttgtttccggtccaccggccgggtga aaatttatttcgtcgtcatccggccgcatttttttttcgtacatcatcgt tagggttagggttagtttgtttgtttggaaaacttttgtgaatcagtttt tgaggcgtgtgatttatcgcatgtgatattttatattctactgtaaaatg cacgcctagaaatcacttggaatgaaggttttatcctgatcattgttata gaaatgaaattttattcatctcaaactaaaccctgcattgtttttgttaa ttcttgcttgcaactcaacttttaagaatttttttatttttatatacaac ttggtttttataaaagaatcatgttgatttgtgagtaaaataaatagaaa cattcacaaagtggggacttttcagtaagtaaacagctttgtttttataa aaggaatcaTGCTGACTTGTGAGTAAAATANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacttgtgagtaaa ataaaaagaaacattcataaagtgaggatttaaaaaattggggaaatgtt tctctcactctacttttttctcaaaaaagttcacttcGTGATCACAGTTT GGAGCCTTTAGcaattgaagataaatattcaaaatgaaagagagtgtcca gttctttgagatattgtaacacaattgaatatataaacgatgaaaattaa gtatttgaatGATCGCATGCCTAGAccactataaatcaaaatctaggcgt gcgatgatcacacgtgaatttttcttatgccgaagcctgtagcggtgtca agttactacagatttaagataaagaagaccatcattttaacttctacgag tgctttaaaaaatcgagttttgggatcgaaatttagcaaaaaaaatttgt ttgcggccggccgggtgagtgtttttttcgtcacccggtggaccggaaac aaaaatatttttagggttcgcCTTGGAAAAAATCGTTGAAACCATTGCAA ATGCACACCtcgtgcaaatgcaaggatttccgtGACTGATAGTTCGATAA CAAAACAATATATTGCTCAATTTAAGTattgcattttgaagttttttttt gggaATCCAGTGACATCATAGGATCCATTTACCCCTAGACAAGAGTCTGT CTTCTGATAGAAAATGACtgttcaataatttgaaatgtatattgtcaatt aaaaaaaaaagaaatatgtaattttattatCAGAAAAATTAATTAACTTT CTTTGTCCTACTTTTAACTATTGTATTAATTTTATAATAGGATCTGATCA ATGAGCAATAAACCAAAAAGACAAAGATGGTACCTGGGTGGACCAGCTGG TGCTGGAGCGGTCATGTTCACTCATCCATTGGATCTGCTCAAGGTAGAAT ACAATACCATGTAATTATTTGTCTACTTTAAACAGATTCGAATCACATAA TAAGTCACATTAGGCTTTGATGTTTTAGGACACATGAGCAATTTTGGTCG ATTCTTCAGAGTAAATTTTGGGTGTTGNGTTCACTCATCCATTGGATCTG CTCAAGGTAGAATACAATACCATGTAATTATTTGTCTACTTTAAACAGAT TCGAATCACATAATAAGTCACATTAGGCTTTGATGTGTAAATTTTGGGTG TTTAACCTTTTAATAAACCAAAGTTGAAACAGGgatgttatttttttaat agataTAATAGATATTTCTCCCAATTCACTGTCTCTGTTCAGTCAGTAAA CCAAAATTCACTTCCAACTATACCAAGTGGCAATTAAGTCCTCGAGTTCc acatggacccgtagctcaatggtagagcaaatgcccacaaatggcatggt tgtgagttcaaGTCTTGCTGGATCCGTTAGTTTTCGAATGGCTCtcggtg gctggtcagaagacaacatgagagctactgtattcacttcattacTATAT GATTATTTTAGGTTCACCTACAGCAAGCAAAAACAACCAATAGAGGATTA ATCTCAACTGCTTTGAAAGTCATCAAGAATGATGGTTTCTTAGGGTTGTA TGGTGGTATCAGTGCTTCCATATTACGACAGGTTTCATCATTACATCTTC TTTCCTTCAGTGTACAAGGTCTATGTAATCATGCAATTTAAAGTCTCAGG GGCACTTGAAACGATTAAATTTGACTTTTGATATTCTATGATATTCTTAT AGTATTCAGACATTTTAGAAGATAGACATTTTGATAATATCAAAGCTCAT ACTTCAGGTGTAGAACAATAAACTCAATATAAATTCACTCCCGATCTGTA TAATATCACtgtctcactaacattctgctGACTTGTTATTGTGAAGGTTc cgatcacagacttgcaccgtGTTCAAATCCCAAGTACTTTCCTAACAGGG TATTAGGGAAGATAGACTCTTAACCTACACTCATCCCattcaaacatttt tgtaattGTTTGTCTTCTTCTTTGCTTAGCTCACTTACAACACAACACGT TTTGCCTTATATGAAAGACTCAGTGCAAAACTACTGGAAAATCGTAATGG TAAGTTTTTATGAAGTATCTTTAGTAATGAGTTAAGTCAGACTTGACTGA GTACAAAGCTCAAGGGTCAAGAACGGTTTAGAAAGTGAGGATCTTTATTT GGAAGTGATAATTTTAGGGATGTCATTTTGGATAAGCAATTTTTTATATA TCTTATTTTGTCAGGATtatataatttgctgtatcttGACTTCTTTGGAA GAAATCAATGTCCAAATCAATGTCCATTTTTCATATTGAAGACATTTTTA ATGTGGTATTTTGTTGGTAGTAATTCAAAACACCTCTCTATTCCCTCCTC CCCTTCATCGACCCAAAGACCACACCTTCTGCACTATGTAATAATCTATA TACCACTTAAAAAATTTTACGTAAAGAATTGTAAGATCTATATCCAATAT GTTGTTATCACGAGATTTACTTTAAATTGCataatatttcttaaaattgt TCCTTTAGATGCCTTACCGTTTTATCAGAAGCTTGCTATTGGTTGTGTAA GTGGTGAGTTTTATATATATTTCTTTTCcgattcgaaaaaaaaaaattct aaattggAGAGagacattttttttacaaaataatacaAATTAAAGCAAAC CCTCTttcaattaaagtttttcatgtttCTAGGCCAGTTGTATAGAGATA ATCGTTCAAAGCTATATAAGACTGTGGATATATGTAGCTCTTTGTTTATG ATTATTGACAAGTTGACAAAGATGGTGTCTCCAATCATTGCAAAGTAGAG AGTCGGTGTCTCCTTTAACAGTATCAAAACAATacaatctttttttataa gcataacctttatacacgttttttttataagaacatctaaaatttttgaa gcctttggatgttcttaactttttgagttttaagcctaaaaatgtcctta aacatgttcttatttttctcattttatgaatatttttgtccattttatca agaatttcggtgtttttgagtcctcaaagccttaacttgttctttacaTT AAGCTTAGGTCGAAAAATTCatcattcaaattttgttttaaaaatgggAT CAATTATTAAAGAATTAAACAGTTTTTAAACTGTACACCTTCTTACAAGG TGGATGAAAtcattaaactttttaaatgatGGTCCATTTTCTGGTTTTTA GGGTTTGTCGCTGGTGTTGTTGGCAATCCTGCAGACATGGTTCTGACCAG GTAAATTATGAAATCATAAACCATCGTTAAATTATACGTCAATTACTTTT GTGGTCCAtttattgaaaaatcaaagaaattcaattaaaaaactCGAGTA AAATTTCGCATTATAATGCAATAACTtcctaatttttaaaaatcttccaa ACTGTTTAGGTTTTGTTAGCTGGCAAAATCAACATCCTTTAAAAATACTG CTAGTATTTTAGCAAGTAGTGATCGGTTTGAATTCAAGAATTTAGAATTG AATACTGAGCCATTTCTACCCTTTTGGTTTTTGACATGACATGTTTTAAG TCCACCCTAGGAAAATAAGGTACCTTCTGAATTTTAGGCACCCCAAATAA ACAGCAACTAGTAGGGGTtattataatacatttttttgctcagaatttac atgctctttcagatggtatcaataattttcgtttattttgactttaaaaa atcagccattttcctACCCCTTATTTccccttgcaattttgcctatAGCG TCACTATTTtagtcataaaaagttttcccgggcctaatccgcgtcctccc tctcaaaaatatcttttagtatactgttctttggaatagactaaaaatgg ttgGGTCGTAgaaagatgtcacgggacccCAGGCTTGGTCCTCTactaaa cacaaaaaaaatctttaaacagcGCATGTAAAAAGATCTTCCCATGTCAA GTGATTTTAAGTACTATTAGATTTTGCGTCTATAAATCGGGTGACTCAAA GTCATGAAAGAAATATCGTTCAGCTTGTGCAATGACTTCAATAAGTTATT CAAAATCGCCTTTTCGAGGACTCCACTTTCTTCGCCAAGACTGTATGATG AAATTGAACGCTTTATGCGacataacccagctggcacacaacgttgtttc agcgTTGacctaacgttaaatggaccttgtgaacgttagataaacgttga aacaacgttgtttgccaGCTGGCAAAGTATAGATCTACAATGATACATGA TTAAGAAATggtgtatttcttctcaatactttaagtttcttccttacgca ttcatcagttgattagaaatcTACAATGATCTACAATGATCTACAAGGAT CTACAATGATCTATAAGGATCTACAATGATCTACAAGGATCTATAATGAT CTACAATGATACATACAATGATCTACAAGGATCTACAATGATTTACAAGG ATATATACAATGATCTACAAGGATATACAATGATCTATAAGGACCTACAA TGATCTACAATGATCTACAATGATCTACAAGGATATACAATGATCTATAA GGATCTACAATGATCTACAAGGATCTATAATGATCTACAATGATACAAAC AATGATCTACAAGGATCTACAATGATCTACAAGGATCTACAAGGATCTAC AAGGATCTACAAGGATCTACAAGGATCTACAATGATCTACAATGATACAT GTCAAGGTTTATGAAGACTTTGATTCTTCCATTTAGAATGCAAAACGATG TCAGACTGCCCAAAGATATGCGAAGAAAGTAAGTTACCAATATTCACCCC TCAAAGTTTACAGGGTATCTGGGGTTCAGAGTAGAGCACTGAAGATAATA TTCTATTCAGGATATGCACCCCTGTGACATTTGCTGACATAACGTAACTT TTACAATAGCTGGTTGCTTGATTAAAAacataatgggctcttccagaaaa tgttcgtacgttcgtgccttgtccgggggggggggtaaacttgctatGTT TGGGATTAATTTTGCTCtatttgagggtaattttgagtgtcctgggggtc aactaatgcttgtccgggggttagacctgctgtccgagGGGTCAAAAGTC ACGATATCCGGGGGTAgatttatttctaaaaaatgttatatcctccaccc ccccatattcaaaattttctggaaaagcccaatttcatgaagtcattgca gtggtacATATCATGGATAAACTTGTCTATCCTTGTCGGCGCGGTCGGAC TTGTGACGAAAATACAAGGGAAATTATCCTTGACGAATGTATCAAAAACA CAAGTGTTGGAGTGCTCTTGTGAAACATATACATAAGATGCCCTTTCATT GAAGTGATAAAGTAATGTCAATAAAGTTAAGATTAATTCGAATGCTAAAA ATAGTTTGCACTCGACTGTAGAGACTGCAGAGACTCTCTAAAATGTTTCT AGAGTTTTTGCGGGAATATCCTTAGAATTGAAAAAATGCCGTGCGCCGAG AATAAATcttccttgtaaattcattaccagtcTCCTAAAAAGCCGACCGC GCTTCTAAGGGTTGGTGGGTGTATTTGATTCTGCATAACAATATTTCTTC TGACTTAGGCTTCAATTATTTCTCAGATACCCTTGTTATTGCACTCAACT ATGCACAGCATGCTTATCAGGACCATCACATACACTCACAATGCACTTCA CAAAAGTATAACACTTATCTATGAACTCTCACTCTAAAATATTACATAGA TAGATAGAaacgatattttacgtggataacccagtaatctaggactttta ggcagtctttcgattgttttcacggggtccacggccagcctgCTCGGTTT tctatgaactgaacagaacattgggaggagcggggattcgaaccgcgaac CCCTGGTTTAGGACGCTAACGCCTTTGGCCACTTGGCCATCCCTCCTTCA ATAAATAAAACTTCTTTCACCTTAATTATTGACCCATTATTGAACAAGAG CGCGATGTAACGTACCCCCTTTCTCTTGAACGACCGGTTGTAGTCCTCTT TGCGCGAAAACAAGATCagatttcgaatgtttttaaattcgaacattcga aaatctaaggaatattagaaaaattagaaaatggtATTGCTGACTAGTCA ACTtcaaaactggacacacttccGCGGGAAATCTGTGAGCAGTTAGCCTA TTTAGTGTGTAAAGGAATATGATATTTGTGATTGAAACATTCCAGGTCCC AAAACAAAGAATACAGTTTCTATTCATCTTAATGAATAGGAGCTTCAAGC AGAATTAAAAAAACCTTGTCCTAGTTTACTCATTCTAATGGTATTACTgg gaataaacgccccccccccccatgaaaaaaaataaaattaataagCATCC GCCATTCGCTCGCTTTAGTTTAGTGGCTTTTGTCAAtcagctctagttta gacgtccgactttctgccctgcctattctaattgttagagagggcagaaa gtgggcacaaagttggtagttaaaatctttgcttggaaataattgaaaga agacattgcattgacgtcaaaagagggcaatgcattgactttagagagcc cactttaattcataattagaataggcagggcgaaaagtgggccgtctaaa ctagagctcaGCAATCATCAATAATCAGCTCTAAATTTTATAGTCTTGAT TGACGACAAGTGTTCTATCTTTAATTTTACAGATGGAATGGCTGATGATT GTGGGCCCAGCTTGTATACATTGTACTGCTTACTGCTTAAATACAATTGT CATCTAAACTTTTTGTCAGCGGCATTTCTAATATAGTTTGCATTTATGTT TTAttcttatttatatttattcTGATATAGTTtgcatttaaatttttctt cagcTACAAACATGGGTTTGATGGTATTTATCGTGTGGTAGTTGAAGGTG AGGACcttggttaattttttttctccattgttCCATCTctttagattaaa aaaaaatgaataatagcatttcaaattacataggccttttaaggccggtc tccatttttgcgcgacatgagcgaaaactttttgacgtttttgtaagggt CATttgtcggttgaaaaatgaagcaattccattgacgtaacgaattaaaa aagtagaacctttttcaactttttttttgttcgcgcaaaacttttttata acgtaatcttttctctaggcaaaaaaggttaagaaaaaaactgtcccCCA TTTCCCgacaagtggagaccggctttTACTATACCGGGTCACCAAAATAA AGGTTTGCCAAGTTGTTGTGAGTTTACGGATAAACATTTTCTGTCGATTC TCATTTTATTGGACAAAAGAAAGCCACTTAAATTTTGGTGTATaaaacaa tttcaattcagtccatcaaaagttatgtttaaaaagctgaaaattttcac ctacttaaaatgtcaaaattgagTTTGTACGtcttaagaatttcttttcc tTTATAACTTTGAATATGGGAATTTTTTACTTTCAGAAAGATTCCACACG TTATTTGCTGGTGTAACGATGACGGCAACGAGAGGTCTTTTCATGACTCT TGGACAGGTTTGGAGATCTCTTAATAcacctaaaaatcggttttgtttta aataagagtgatatcatttgcttactcatcaattttaattcacaagcttt ttaacaTTGGCTTGACatagatgtggagcaagattggccagaaagaggaa aagaaaaacatttttgcttatatcagcataatataacaatagtaagacac tgtcctgatatgaaatatgtgtctgatatataaacacttatgtaaaaaga aaacctttaacgGCGCGGTCGGCTTTTGAGAGGTCTGGTAATGAATTTAT AAGGAAATGACGTCACTCTTTGTTTTATGAGAATGCCAATGCaatgaatt gacaaaaaaagtcTTCTTGGAAAACTCGAACCCAGCCTCCCCTGCTGGCA CACAACAGCGAtacattgtgggattgtttcggttGTATTACAatatagaa ttccctcgaggaattcctaagacattactattgtaatacccccgaaacaa tccggcacaatgcatcgcttttttagaaagatAAGGTCTATTCTGAACTT GCACGTGTTTAATCTACGTTACATTTACTAACCCTTAACACCACGGGTGA AGTCCACAGATAtgttatataaaacactagatagagcttttcCAACCCTA ATTGAAGCAAAACAATTCGctataaaaaagtttcaacagTGAAAACCAAG ATTTCTACTGTGACCTATtgtgacctactttcagcaaagatggcgtACTA TTTTGCTTCACCTGTCTTGGCTTGGAAAAGatagagtagctctatctagt gttttatataagatatctgtggccAAGTCTCCTAGGAAGGAATGACGTCG AAAGTTTTTACCTTTGAGAGGATATCAATGCAACGACTTTTTGAcctcaa ttcatgatattcatgacgtaatgttttttcGGAAAGACCCCGGTAGTGGC ACATTTTATACaatttttgtctagtttaaatttgccactactggcttaAA CCGGGATCTTTTCGtcgaaaacattacgtcatgaatatcatgaattacct AACTCTAACACAGACTCTTAAAGGGACGTTTGTTCTTAACGTTTCACGTT TTCCCATCCAGGAATTTCGGATCTAGCCCCTCTGTTTGGGGCATTAAAAT CAATGAATGTGGACGTACTGgctaaaatatttcatttgcCTTCAACGAGT TTCCACTTGATTTTCGTTCAAGAAGCAATCCTGATATTTTTCGCAGGATG TCTACCTTGCTTTCCGCTTAGTCTACTTTACTCAGCTTTACTACTCTTTT CTTCCCTCATTAAATAGGTGGCAACTTATGACCAAACAAAACAGATACTC ATTATGACAGGGTAAGTTTTTCTATATTCAATGAAACAATCTCGCGGAAG ATTTTTTGGCCGTCACATTTCTACATAACAGCCCTCAACCGTAAATTTTA ACACATTTTAGTCCTCATTTCACATGAATTGATTAAAACCTTGAccaaaa aaagtgttttagtgcgaaatattttaataaaagctCGATTcacgaaaaat gttttaattcgATACTTGGTACtgtttttcgctattttttgttgaaagta gGACCCATATCTAAGTATCGTTGGAAAATGATTGCGTAAATCTAATTTAT acccttttttttttcttgcagATACTTCAAAGATAATGTCCCTACGCACG TACTTGGTAGCTTTTTTGCAGTAAGCGAATTCCTCGATTCTCCCCATATA GTtaaaagcccgaagagctacgATCCCCTAATTTATATCTGAAACATGCC CCCCCCTTTCCCCCTTTCCCCCTTTCCCCCATTGTCAGCGTTGAGTCGGC CATTTCCGGACTCAACACTGATAGTGGTCTGGGGACGGATTTTTATCTTT CAATAATGTTTAGAATTCTTCTGTCTCAAGATATTTGCTGGGGGATTGTA GAGTGGAATCAACCATTACTctgttaaggccggtctccacttgcgcgcgc tgcgatcgcactttttgacttcaatcctttttgcttggaaaaaagattac gtcataaaaatgtagcgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAGATCgtgccaatggagttgcttcattt ttcttttgaccaatagcgtggaagctttgctcgaaaaagtgcgatcgaag cgcgcgcaagtggagaccgacctTTAGCTGTCAGTTAAAAAGAAGAGGAT TAAATATTGTATTGATGAATAATCTGGACAAAATTGAAAGATAAATTTCT TAAGTATTAtcaagggggagggggtgttTAAGTTCCCACCAACTCAGCAA ATGAGTCGCTTGGACTGGATAATCTGATCCGAACAAGCGGTAACCAACTG GAAGCTGAGAGTAAATATGATACTCTACTTCCGCTTTCTATatccatagt cattataaaaaaacctggtctggcaatgtattgttttagctttacgattt ttgatcacgttaccaagatCTCCTGTTGGggttggtctattttctaatca catggtAAAAAAGtctgcaaaataaatcgattttggtacgtgCGCTCCAT CTGTTAAcgataaaaagagacaaaagccttacAAAAAGACCAGTGTTTTT GTGACTCTAACATAAGTAGAAAAGAGGATGAACCACTGGGGTCAGTTTCT CGATTCCGGCCAACCAAAATCGCTAGACAAAACTTTAACACTGATATGGC TTCTTTGTGGAAGAAACTACAATCAAAGATGGCAAATAAAGCCAAATGAA GGTCCCATCTCAGCCCCGTcgacagatgaatgtttatactTATTTGTTTC TAGGGAACGATAGCGACAAGTATCACACAGCCgtttgacgtcatcaaaac acgGATGATGAATGCTAAACCTGGTGAATATCAGGTAGGTTTCCAGCACA CTATGTTATTTCAACTTTCATCTAATGTTTTCAACGCCCATATAATGTTA gctgaacgttgaaacaactttgCGTGTCAAGTGGATTGCTAACGGAACAG GTACCTCACCAAAAACAAATTAACGGAAAATATCATGCTACtgggacttg aaattttcatccataattgtttttttttcgcagGGTATTTATCATTGTGC GAAAGACATATCAAAAGATGGTATCTTCAAAGGATTGTACCGAGTAAGAC TCACTTCATTTTCTTATTCAAACTAATTTCAAACCATCTAGACGTGTTTT CATTTACGTCCACTTTATTTAGGGTGCGCTTTTCAACCTATTCTGCGACT TTATTAATGGATTTTGCTGTAACTCAAACAAGTAGTTTCTATGTTGACAG CCTCAGAAAtgtgcttaaaaagctccattggTTTTTAACAtaatattctt gatatgcgtgaGTCGTTTTCCTAataaaaaacctgaaaaaagccgggatt tgaccaatgtttgttactaaaaatagaaacacggtgGCCGAAACCCGACT TTTTCTGGTGCgtccgttagacgttaatttgtTTTGAGACCAAAATTTGA ATACTAACAGAATAATAAAAACTGATTAATTTTTGATATTTATCCAACAG GGTTTTGTACCACGCTGGATCCGCCTTGGTCCGCACACCATCCTAACATG GGTATTTCTTGAACAATTACGTAAGGCGTTTCCTTTGAAAAACGATTAAT ACTAAGGGGTGATACCGTGTGTATAAAGGTCTATGTAAACTGTACAACAT ATTACCAGGCTATAAATTTACCGAGTATCGGCATGAAACCATAGCCTTTA CAAGGAATTTTTGCTGTGCGCGGAGCAGTTAGGATCTGTTTGGATATTAG CCATGTTTATTCTGCTTTTGTGCCCACGTAACGTTACATGAATGTCAAAA CGTCTTTATCGCGGGTCGGGATCTATCTacaattaaggtcataatatttg agaaaaaatgaaaattccccaggaagttttgaaaccacaatcgatttata agtgctctaaagtataggttcgaagggtagagttttaacgctagacttag gacttacgaccttaggatctgacgatctaaaagttcaaaaatagtccaat aagactcagaatatagcctggaagtctgccaacccatcccaaatcgaaat attcgattaagttaaagagatagcccaaaatcgactttctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038139XLOC_038139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060646-exon-scaffold_348-1491911889:404360..404472TCONS_00060646-exon-scaffold_348-1491911889:404360..404472Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:404360..404472TCONS_00060646-exon-scaffold_348-1510915933:404360..404472Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:404360..404472TCONS_00060646-exon-scaffold_348-1575043694:404360..404472Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:410300..410402TCONS_00060646-exon-scaffold_348-1491911889:410300..410402Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:410300..410402TCONS_00060646-exon-scaffold_348-1510915933:410300..410402Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:410300..410402TCONS_00060646-exon-scaffold_348-1575043694:410300..410402Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:410971..411090TCONS_00060646-exon-scaffold_348-1491911889:410971..411090Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:410971..411090TCONS_00060646-exon-scaffold_348-1510915933:410971..411090Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:410971..411090TCONS_00060646-exon-scaffold_348-1575043694:410971..411090Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:411489..411558TCONS_00060646-exon-scaffold_348-1491911889:411489..411558Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:411489..411558TCONS_00060646-exon-scaffold_348-1510915933:411489..411558Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:411489..411558TCONS_00060646-exon-scaffold_348-1575043694:411489..411558Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:412018..412062TCONS_00060646-exon-scaffold_348-1491911889:412018..412062Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:412018..412062TCONS_00060646-exon-scaffold_348-1510915933:412018..412062Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:412018..412062TCONS_00060646-exon-scaffold_348-1575043694:412018..412062Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:412711..412759TCONS_00060646-exon-scaffold_348-1491911889:412711..412759Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:412711..412759TCONS_00060646-exon-scaffold_348-1510915933:412711..412759Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:412711..412759TCONS_00060646-exon-scaffold_348-1575043694:412711..412759Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:414246..414287TCONS_00060646-exon-scaffold_348-1491911889:414246..414287Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:414246..414287TCONS_00060646-exon-scaffold_348-1510915933:414246..414287Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:414246..414287TCONS_00060646-exon-scaffold_348-1575043694:414246..414287Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:416413..416456TCONS_00060646-exon-scaffold_348-1491911889:416413..416456Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:416413..416456TCONS_00060646-exon-scaffold_348-1510915933:416413..416456Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:416413..416456TCONS_00060646-exon-scaffold_348-1575043694:416413..416456Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:417046..417116TCONS_00060646-exon-scaffold_348-1491911889:417046..417116Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:417046..417116TCONS_00060646-exon-scaffold_348-1510915933:417046..417116Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:417046..417116TCONS_00060646-exon-scaffold_348-1575043694:417046..417116Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:418427..418470TCONS_00060646-exon-scaffold_348-1491911889:418427..418470Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:418427..418470TCONS_00060646-exon-scaffold_348-1510915933:418427..418470Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:418427..418470TCONS_00060646-exon-scaffold_348-1575043694:418427..418470Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:418781..418815TCONS_00060646-exon-scaffold_348-1491911889:418781..418815Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:418781..418815TCONS_00060646-exon-scaffold_348-1510915933:418781..418815Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:418781..418815TCONS_00060646-exon-scaffold_348-1575043694:418781..418815Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:420563..420643TCONS_00060646-exon-scaffold_348-1491911889:420563..420643Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:420563..420643TCONS_00060646-exon-scaffold_348-1510915933:420563..420643Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:420563..420643TCONS_00060646-exon-scaffold_348-1575043694:420563..420643Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:420843..420902TCONS_00060646-exon-scaffold_348-1491911889:420843..420902Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:420843..420902TCONS_00060646-exon-scaffold_348-1510915933:420843..420902Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:420843..420902TCONS_00060646-exon-scaffold_348-1575043694:420843..420902Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1491911889:421310..421900TCONS_00060646-exon-scaffold_348-1491911889:421310..421900Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1510915933:421310..421900TCONS_00060646-exon-scaffold_348-1510915933:421310..421900Clytia hemisphaericaexon
TCONS_00060646-exon-scaffold_348-1575043694:421310..421900TCONS_00060646-exon-scaffold_348-1575043694:421310..421900Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:404360..421900 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 1.89245e-06 0 2.07214 1.04459 0.497524 1.87863 1.04565 6.50247e-06 1.8471 0.829729 0.498407 0 0.116113 0.285845 0.961702 0.642015 0 0 0 0 0 1.25642 0.897606 1.02255 0.830427 0 0 0
Blast
BLAST of TCONS_00060646 vs. Swiss-Prot (Human)
Match: DIC (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 3.333e-79
Identity = 100/206 (48.54%), Postives = 138/206 (66.99%), Query Frame = 1
Query:  124 MSNKPKRQRWYLGGPAGAGAVMFTHPLDLLKVHLQQAKTTNRGLISTALKVIKNDGFLGLYGGISASILRQLTYNTTRFALYERLSAKLLENRNDALPFYQKLAIGCVSGFVAGVVGNPADMVLTRMQNDVRLPKDMRRNYKHGFDGIYRVVVEERFHTLFAGVTMTATRGLFMTLGQVATYDQTKQILIMTGYFKDNVPTHVLGN 741
            M+ + +  RWY GG A  GA   THPLDLLKVHLQ  +     +   AL+V++ DG L LY G+SAS+ RQ+TY+ TRFA+YE +  ++ +     LPF++K+ +G VSG   G VG PAD+V  RMQNDV+LP+  RRNY H  DG+YRV  EE    LF+G TM ++RG  +T+GQ++ YDQ KQ+++ TGY  DN+ TH + +
Sbjct:    1 MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVAS 206          

HSP 2 Score: 92.0485 bits (227), Expect = 3.333e-79
Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 2
Query:  737 GTIATSITQPFDVIKTRMMNAKPGEYQGIYHCAKDISKDGIFKGLYRGFVPRWIRLGPHTILTWVFLEQLRKAFPLK 967
            G  AT + QP DV+KTR+MN+K GEYQG++HCA + +K G     Y+G VP  IRL PHT+LT+VFLEQLRK F +K
Sbjct:  210 GGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPL-AFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIK 284          
The following BLAST results are available for this feature:
BLAST of TCONS_00060646 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIC3.333e-7948.54Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
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