TCONS_00060629 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060629
Unique NameTCONS_00060629
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1233

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060629 ID=TCONS_00060629|Name=TCONS_00060629|organism=Clytia hemisphaerica|type=transcript|length=1233bp
gaaatttttaaagagaaatcatgaaagcttctcaaattcataacacacgc
tgataaaaatagatttcatttacaaggaagcttttggggtatattctaca
aatattattttgatgaaaagcgggaacatcatagcaaaatatgtgcaaac
gtactgcatgaatacttcgcctgcttaatttttcttataaaaacagaaca
ctcaaggggacagagatggatttctattttcaacagtttacaatagaaaa
gacaaagaagcaatccgctaaggaattctcgtccttcatccagctccgct
ataacatatccctgtttCAATTAATACAAGCTTAtaacaaagaaatcaaa
aagtaaCTGTAACTCTCAAACAAGCTGTGATAAGtttttcaGCACGTTAG
CGATGTCATCGGAGCAATGTGCTCATCGTCTTCAAGAGTTGATGCGTATC
CCTGGTAACAGCCAGTGTGCTGATTGTGGAACTGAAGAACCGGAACCAAA
CTTTGTTTCATTGAATCTTGGTTTATTCATTTGCATCAAATGTTCAGGCC
ATCACAGGGCCCTGGGAACGAGATTCTCCGTAACGAAATCCATATTGCTT
GACACATTTGACGACGCCAAAGTCAAGCAAATGGAAGCTGGTGGGAATAT
GTTAGGTGTAGAAAAATGGCAAGTAAACGTCCCAAAATGTTGGCCAATTG
TTGATAAACATTCACCAGATGATCTAATTGAGCAATGGATACGAGCGAAA
TACGAGCGACAAGAATTCACCGAAAATCAAGTGACTGAGGAATTAAGACC
TTATTGCGTAGgTTCGAAGTATGGTTTtctgatgaaaaaaaagaagaagg
acAGTAAATGGCAACGCAGATTTTTCGTCTTATCCGCGGAGGAAGGATAT
CTCAAAATGTACATCAAACAAGGGGACAATGAACCTAAACACAAGATTAG
CATCAGTGGAATTAATTTAATGATGGTTCATAGTGACGTCACCGGAGAAA
AACATAGCATGCTAATCACTTTTCCCATCATGCAAAACAACCAATCGAAA
CAAAGGCATATTTATGTATATGCGGACAAAAGTTTTGAGATAGTTGACTG
GTATCTAACAATTCGTGGAGCACGCCTGAAATTCTTAACACCCTATTTAT
ACGAAGTTGAACGTCCAGTGgtTGACTTTTTGCAATCAAGGAAATTTATC
AAATCAGGATATCTACACAAAACTGGAGGCANt
Run BLAST on NCBI

transcript from alignment at scaffold_348:147553..166890+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060629 ID=TCONS_00060629|Name=TCONS_00060629|organism=Clytia hemisphaerica|type=transcript|length=19338bp|location=Sequence derived from alignment at scaffold_348:147553..166890+ (Clytia hemisphaerica)
gaaatttttaaagagaaatcatgaaagcttctcaaattcataacacacgc tgataaaaatagatttcatttacaaggaagcttttggggtatattctaca aatattattttgatgaaaagcgggaacatcatagcaaaatatgtgcaaac gtactgcatgaatacttcgcctgcttaatttttcttataaaaacagaaca ctcaaggggacagagatggatttctattttcaacagtttacaatagaaaa gacaaagaagcaatccgctaaggaattctcgtccttcatccagctccgct ataacatatccctgtttCAAGTAGGTATTCAATTCAGTGAttttatttat aacaaaagaaattcataaATATCTGTAATATAAATCTCGGGATCaattta caaaagtattttGCTGAAGGATTTGAATAATAGCTTGTTGATGCAAGAAT TCTTATCGTTCCTCTTTGGGTGATGTTGAGACATTAAGCAAATAGTAACA CTATGTGTATAATGTAATAACTATCTGGTTTTGAAAAGTAAATTTGTAAT AGGAAATTGTTTAATAGAATTgttgtttttaataatttccAAGTTTTATT TGTGAAagaaattgctttttaaaacaTGACTcttcaaagattttattttc gaacttttttatgaggTGGTATACAGCTAAATAGTTTTATGGTGCTACAG CCGAGTTCTGAAAAATTTCTGGGAGCGCGAAACTCTAATGAAATCACTCT CTTGTTGATTTGTTCACCGAACAATAATAATTGATAGTTTTATACTACAT CAACTTTTTCTGTTCCACGAATTTAAGTGTATTATATAACTTCTCAATCG TTTGATAATTTAACCACTAAAAGTAAATTCTATATTCATCTATCCTTTAT CTCTTCTAGTTAATACAAGCTTAtaacaaagaaatcaaaaagtaaCTGTA ACTCTCAAACAAGCTGTGATAAGGTATGTTTTTATGTTATGCTTTCTTTA CTGTAATGTATGTGTGTATTACGTTACGATTTCTGAAGTTtgaagttttt agttttttagttttttgccaaCTCACCTCAggacatttttaaaattcaag AAGGANAAAGCCTTTTTCAAGCCTGTTTTGAAGCCAACTCACCTCAggac atttttaaaattcaagAAGGATGAAAAAGGTATGATTTATTGAGTGTACT ACCTACTTCgtcccccctttcttaaggggggatgACGCCTTCCGGAAAAA TTTAGAAGAGGGGGGGGTTcagaaattttcctgaaaaaagggGTTGATAG CAAGGAAGGAGGgatagtttaagaagggggcttacatatatattgtagat tatttgcAATCACtgctatgaaatttggtcttcatgaaagAAAGTTTTCT GTAGTTATAGTCTgggtcaaaaagaagaaagatgttTATTAAttcgcttt ctctctctaaagatatttcatatatttgttagctatttgtTGTCTAAAAT CCTTGGGGGATGGACATTTTTAAAGGTTATGGGGATGTCAAGAAGGGGGA TCAGACCTCTTTCCGCAATATGTACTAAACACGAACATGTAGGTTATACT CTGTGgcatttttaaaatatatacaGATAGTATTTTTCATTCAGAATCGC ACTTTTGCACTTGTTTGTAGTTTAAACTCTCCGAGattgaaaattcaatt tcatatttATAAACAAACCGTTTTATTCTTATATAACTAAACTCAATTCG AAAGCTGACTGAGTGCTTATTAAAATAATCAGGGAAATTCCTTGGTATAA AACATTACTTTCGTCACATGTGGAGATACCATAAAAGAGATGGCTTTAAA ATTCGATAAAGAGTCCTGAGAAAGAGTTAGCTATAAGAGTCCCTTATATT TCAAATAGATTTAGGTTTCCCACTTTACGATATTAGTTCTTGATAAATAT TTAGTTTCCAGGGAAAAGATCTTTTAAAATTAAGTAAGGTTTATAACTCA AAAACCTTTGTCGCTTTTCGGCTTTAAGCAACCTGCATATCACTTTAACA AAGCTGTAAATACCTTTTTGCAACTATCGAGACTGCAGTATAGTGCCAGA ATTAATCTTAATAATCAACCGAAATAGAAATCATAGAgtagatgacgtca tttaaatagAGGATTTGATATTCCTTCGATACTATTAAGAAGCCAGAAAG GTTAATCAAATAGCATAAAGTCGATTTTTCTCTATAAATGATTGAGAAAT GAAAATCGAGGATTAGAAAGGTTAGAACTCTTTGGAGACATCTCAGTAGC AGCTGATCAAAGGCTAACGAAAGGTAATCATTTCTTCAACGCATCTGAGA AGCTAAAGAAGTTGTATGGATTCTTTGCAAGAACTTTTAGACAGCCCTGT AAGTACGTAATACTGAGTTTATGTTTGTGtatttttctgcgacggagacg gtaaggtttataatttgagtagatcctgaccagctgaggacgacggtaaa acagcacttttaccgtcctcgattttgcaggtcaaaactacgggttattc caaatcgcttcagtcactttaccgtcctcaaaaatgcaaatacataaact cactaatAATTTGGATAGCTTCAGTTGAATTAACCCAGGGATATTTAGAA AACAAATCTCCGTGTATCAGTTCGGGAAGTTCCATAGAATCGCAGCGCTG CGGAATCCCGAAACTTTATTGTGTCAAATTCCGCAACGTTGTTGAATTTC ACCCCAAGAACGGGGTCACACGGGCGATGTTGATGCGTTTTATTGTAAGT GCTTGTGATAAGATAGTGAGGGATAagtggaaatactgaaaatcgcCCGC GCGCCTTCGATCGCATAGATATTTCTATGGAAGTGAATTAATGATAGCAA TGTTGTTAATTTTCAATTAATAGGTCAATTAACGTGACCGTACTTGATAA CAATGTTGTGTTGTTTTGAATGTGAAGAATGTTTGGCAAAAAGTAAATAG TTTGTTATGAAACGACAACTTTGATTGCTGAGCTTCAAATTGAGAATATC ATCGTTTAGTcagttttgatttcatcgtCAGATTGTTTCATTCAGCTCTG GTTCTATTTTGATACTAAATACTGAGTGTAAAACCATACAAAACCATTGG GTTTTTAAGATGCTATAATTTTATACGACCGAGtaaattcattaaaaagt tGATCATTGAATATTGAGCATATTATTAGGATAGGAGgaattgttttttc atttgttggatatttcaaaatgttaaaatttaagAGGATGCTTTCGTCCA GTGACAGAGAGAGTCCTGGGGCGAGACGAGGAGTTCGCCGACTTTCCGAT CTTGAGAGACTGAGGATTTATAGACAAAGTCAAACTGATGAGGTTTGCAA CGAAATTCagagatttattttattttgttttattaaCCTTTCATCTATAG CTTGAAAATTtgtcccgcgaaaatttcttcccttgagGTATACCCCTGAT TTATGTATGTATTAGATCTGCCTGTCTTAGTTAGAGCTTTTTTCAAACCA AGAATATAGGAGATATACAGTTCTACGTAAACagtcagaaaaaacaaaag atataTTATCGACAGGTACTGCTCACATCCACTGTAACGATAACGTCAAA TTTCAATTGAATTGCTTAATCAGCGCGCCTTTTATGCTGACAGAgcagaa taaacaaaatattttctaaaaatctgtGTCCACGCGGTGCGTTAAAGATT GAAAGTTATTCCTTCTTTTGCTAAAGACTGCTGTGTAAAGGCCGGTCTTC ACTTTCGCGCAatatgagcgaaaactttttgacgtttttgtaaggtcatt ggtcggttgaaaaataaaggaattctattggtcgaaattgacgtggTTAC ACTAcattaatatctttaaaatttttgaaattttttaatcaaaaatacat taaagaaattaactattttctttaaagtcttTTCGAAATGTTGTATcaaa tcttcaatctttttttctcaaCTTATTTTCTCACTCAACAAACGACATGA GTGAAAGGAGGAAGGCTGCAGCACGTATTGTGCTAATTCTTTTGTAACGG AAATTTGAGaggaaatattcgaaaaagaaaagtcgAGCTTAAAAGGTCTT GCTGAATACGCAAGTGGCTAAAGTTGAGGAACGAAAAAAGTGCCTACAAC AACATATTTGCTGAACTTCTTCGTCTACGTGAccaagaagaaaagaagaa ttctATATCTCAAGATGAACACAGAAACTCGTGGCTGATATCCATCcatc atgcaaaatatttctCTTATCTTATCTTTCACCCCTATCTCATATTAGCC ATACTACGGTTTAAAAATTCCAAACGCTAGAAAATCCATTCATCGAAAAA ATGTACAGAACTATCATGTCGGTGCCTTTGATCTCGAGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGATTATACCGC CAGGAGAGAGGaaccttataaaaagaaaaacgagaaaaaaaaaacaatag aaaacttaggcaaaattaaacaaaaaacaagCTAAATGAGCATTGTGAAC AATCAAAACAACGGACCCTCGAATCGACCAGTATCTTGGATAAATTTTAC GGTTATACTTATTATATCATGATTTAGGTTGTTACTAAAATTCGAATCCC CAAAGAGAAGTATTCTGGAGAGTATTCTTGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaa aaaggaaaaaaggaagCACGATATCGTTCGGTTCGACAAAAGGGTGGCAC AAAAGGAGGTCTAATCCTACGTCTTCCACCAGCATCCTCATCTTCATCAA CCTCCTCCCCCCTCTGGGGAGGAAGGATATTAGAAAGATAAGTTGGCGCA AAGCCATTAATTATTTTATAGAAGAGAATAAGTCTGCGGCTAAGTCGCCT GTCTGCTAGACTTTCAAGACCTAGCTCtagataaattttttctctagaTG TTCCTCTGAAACATCCTGTTATCGCAAGACAGGCATTGTATTGAATTGAT TCGATTTTTTCAGAGAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGGTAAATTG TTGAATGTAATTACTGGAGGATCTAGGTTTACCCTCCTTGTAAAGAAGAC TTCGACGGCCTATTTAGAAGGATCAGGGTTGAAggacatcttccattgat gagcccactCATTTATCTTCTGCAAGTCACTGTTCAGTTCTTGAGAACAG CGAATCTGATCAAGAATCAAGGAAAACAAAGAAGAGTCATCAGCAAATAT TTTTATCAAGGAAATTATATCTTCGGGGAGATCGTTAATATATACCAGAA AAAAGAGGGGTCCCAGAATGGAACCCTGAGGAACACCTGCTGAAATCGGG GTCCATTCAGAGGATTGACTATCAAGAACTACCCTCTGTGACcttccaaa tagaaaattttggatcAAAAGAAGGAGAGAGCCAGAAACCCCATATGACT TAAGCTTGAAAAGAAGGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTGCTTTCTTC CATTTATCAGGAAAAATACAAGactcaagagaaaattgatagATCTTCAT AAGAGGCTTAACCAAGGATTCATCGCAAATTTTTATCACCCCTATCTCAT ATTAGCCATACTACGGTTTAAAAATTCTAAACGCTAGAAAATCCATTCAT CGAAAAAATGTACAGAACTATCATGTCGGTGCCTTTGATCTCGagagaag tgaagaaaaaaactttaaactcttTACCAAAAAAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNttattttctttaaaagaggaCTGTTac acttgtaaattttttaatcataaagacttgattaaaaaatttcagaaatt ttgaaataaattaatgtaatgtattcgcgcgaaacttttttatgacgtaa tcttttcttcaggcaaaaaaggttacgAAAAagctgtcgcccatttcgcg caaAAGTGGAGACCAGTCTTATACAAATGAattgaaataatgaaataaaa tgttatattaccctcttttacaaaaagtgctaagttttaatgggtaattt tttgaattgtctgcaaaagattgaactatctaaaaattttctttctaaat tgatgtttcaaaagttataactctttttgtacgaaaattgggatgaaaaa ttgctcaaaaccaatattttcaagattttgagacaaagaagtttttacaa aaattttccgaaaatttattgttagtttggttaaagatacaccaNattgg gatgaaaaattggtcaaaaccaatattttcaagattttgagacaaagaag tttttacaaaaattttccgaaaatttattgttagtttggttaaagataca ccatctagcaaaaatattttcaaaatctttcttcttcgccgaaaataagc tcctcaaagttgaaatacttgtcttcgcaaatgtcttcattttcagattc aggaatagtttgtctaacagaaaatgtataacatgccatagttttgtcgG TTATCAGTCATAAAAACACATTTTATACACGacaatatgaaaaattcaca gTGGTCAAAGCccttaaggaaagaaattttcgtggaatttaatttcgtgg ttgagagaggattttttgttgaaaatatggcctatttttcccaaaaaagg ccaattttataggtgttttttttaatcatgagaatattcgtgtttcgcgg aatttaatttcgcggatttgtcgaaaaaccgcgaaaattgaattctgcaa aaatttgttccgcgaaaatttgttcctGCGAAAATTTGTTCTCTTAACGT AAcctgtattttttcttttttctttagtttttcaGCACGTTAGCGATGTC ATCGGAGCAATGTGCTCATCGTCTTCAAGAGTTGATGCGTATCCCTGGTA ACAGCCAGTGTGCTGATTGTGGAACTGAAGGTTGTCAATATTAATTATCA AATAATTGTATCAAATAATTATACCCAGCAAATAATTAAtgtaaattctg taaaaatccAGGAGCCCTGGTGGACCAAATAGGACAACAAGAACAATTTT CATTATCTACGTTTTTAGCACTTTCCTCTCATCACTTAGTTTCAAATGAT GTTTGTATAATGatcaaaattcattgtttaTGTGTAAAATAACGTCATTA AAAATTGGCCCCCAGCAGCTCCCAAGGCTCTTTTAGTCAATTGATGATAT TCATAACGTAATCTTTTCtaacggaaataccccggttttagccagtagtg gtaaattttaactagacaaaagttgtacaAAATTTGCCATTACTGGCAAA AACCAGGGTCTTGTCGTATGaagcattacgtcatgaatatcatgaattgt atcTCTCAATAACTACTAGAAGTCTATTTATTGAGACTCAGAAAGCGAGC CGAGTCAGAAGTAAATTATTAGCCTGTATGCTTATGTCCTTAATCATGTT TCGTCATCGTTATTGTTTGTTCAGAACCGGAACCAAACTTTGTTTCATTG AATCTTGGTTTATTCATTTGCATCAAATGTTCAGGCCATCACAGGGCCCT GGGAACGAGATTCTCCGTAACGAAATCCATATTGCTTGACACATTTGACG ACGCCAAAGTCAAGGTAGGTGTTTTAGCTTTTTATGGCAgtgattctcaa caacaaaattgCCTTAACAAAAAGTTCTTAAGatgttttgtaattttgga ggattttttttttcaagagattTCTTCATGTTTCTAGTAAGCAAGTTTTA aaacctctataacttgaaCAAGTTTTCGTGTTCCTTCAATTAATAATGCC ttattttaaacatattttaaccttggaacaatagaatttttatccctatt gagatttcaatcgaaattttcatcccaactgtaggaaaaagtttaaccgg ggctgtgagacaggggtgtacgaGATGAAAGTATATCATTAGCCCGTTGC TCCTGCTTCAAGTGCAAGTGTCAAGTGGTAATACCCAATATTCCACAtat caaaataattaaaagaccGTCGAAAAGTCCTACATTACAAGGCTATCTAC GCATATGTCGACTTTATTTTTCGACTTTGCGTTTCGGGAAGCTTGTTTCT TGAAACCAAGTATTTCGAGGAGATAGCGCTTTTCATACCTTTACTTTTAC CTCTACATATACGTTGAATATTATATGGTTTTTGATGTAGTTTAACATGC CAGACGACTAATTAAGAAAAAGTGGGGTATGATAAAGAAATTATATagag ccacagggttggatagtggcgATCAAATCCCAGTTCCTTCTCTTCTAGTA TGCTTTCTTcaacgttgtggcagaaacgtgtcaaaggtgtggtaactttg tctagtagaaacacgtagaaagtatacttcttttctcattgttattttag tttcttcgaCTGGTTCCGTGGTTTTCTTTCACTAAACACATTGTTTTACT ATattttatctgtggtggtgtctaattaacactgcttggcGCCTACttac acaaccctatttccatcatataggaggatattttcgtaAGAGGCCGAAAT tctgtgtaggtcgaaaactgaggaacagattatgtgttttcatgaaatat ttttttgactcatattgagttatttttttccatcttaactcatattgagt tgcTTTCTTCCTTATATtcattttagatcactagttttgcattgatggat ttctatgtcatcatattttccttttcaactccgacctgattgattttctg tgaatgttcattctagatgtTTGTTGTGATTTGtcttgtctttttgtttt gtgggtttggTCTTtagtgtttccattttgagtagttgaaggttttatac ttctagactatatatatgaCAAAGCAATTCATTATACCGTAACAATTGGT AAATGGTATTATCGTATAACAACTATTATTACTGTATTACGCGGATTATA AACGACTTCAGTCTATATTTGATATTATGTGAAATTCGACACACACATCA CATGCATATCATATCTTGTTTACATTACGGAGACATATTTCCAGTTCTGT CCTGTCTTTGAATTTAAGGGATATTCGACCAATTGATACCGTAGCAGTGT AAGCAAAATAGACATACATATATAAACTCTTGGATAGAAATGGAACAGTG TGGGGTTCATTAAGGATAAGTATAAAAGCATCAGTAGATTCAATAATTGC AAGTCCAATCGCCTCGCGATTTGTATACAATACGCAGTCAGCCACCAAAC CAATCAAAAATTTCTTACCGAAAGTTTTGAGTGATGGACAGATATTTTAA TCTCTAGAGGAGCAGGATTCAGACTAGAGGAGCAGGCTTCAGAAATGACA ATGGCGAAATTATTACTATCCATCCACGTATTTGTATACATTTGTTCACT AACTGTTATCACAGTATGGCTATTTGGTAAAAAACACTCAACATTCAAAT TAGAGTTTGGGGATCAATATGGAAATTCTGGGGTATTCGTATCCGGTGTA GTGAATCATTATGGTCTTTTCCTATCAGGTATTACACTGTTGAATGTATG GACTATCATTGGATTTattgttttaattgttttgCTTCAGAAAACCGGTG CAGATTGCTTTAACAAACCTATCATTTTCCTGGTACAGCAAGCTTCGTTT TTACAGCTACTTTCTTTTGTTACATTAAATTGGATTTTAAGCGATATAAA TATTAACGATAAATACTATGACTATCAATCAGTTGTTCTTGACTTATTCT TTAGTTGGAGAGAGACCCTAATACCATTTCTCGGCTTTAATATGGCTCAA TTATTACTAGTCCTCATATTTATAATCACCGATTACTACCTACACTACAA AACAGCCAACCAAAACTTACGAGGGGAGCTTTATATTTCTCTTGTCTGTA AAGGTTTTGTCTTCATCGTAATCAATACTATTGTTGCGTTTTATTACCCG GAGAACATTATCACATCGTATTATGCTATCATATTGAGCCCAATAACATT GGGTGGTCTTGTTATCTACATACTCGCTGTGAAAAGCGCATGGAGGTTTT CCTGCTGCTGGAGAGATAATGCATTCAACCCGGTATTGGATGATTTTTCA CTCTGGGTTTATTGTGTATTGTCTATAATTCATGGTGCTGGATTGACTTT TTACATTACCACGTATCTCAATATATTTGATAAAGGTACGGATCTTTGTT CATCACAAAGAGAATGTATATTACAGGCATGGAAGATCAATAATTCTTTA GATGATGGAGATTTACTGCTTTCTTTCGTTTTGATTGCTCCCTTGCTTAA TGTTACACTTATACTAGCAATCGAGAGGAAATTCCGACAACAAATTTTCT TATACTGTGTCTGGACTAGCGATGTTCTGTCTGAATATTGTTGCAGATAT CAGGGTCCTGAAAATCCAGAACAAGATCCGCTATTACAGAATGGGGAGCA CAATCCAAGATATATGGCTGAAGGAAATATTGAAGCTAATCAAAATAATG ATCCACACGAGGATAGACATGAGAGAGGAATTGAACCAGCGAAGCGCCCT GATCAGCCAGATTTACGGCAGCCGAGGAACATTTTGGTAGACAAGGTTAT CCCAGTACAAGAAACGAATCAAAACTCACAATTATATTCTGAATGCCATA ATCAACTAAATCATGATTATGTACAGGGTAAACTCGAACCGACCACTTCA GAACACCCGCCCCTTACTGAAGAACACCCACCGCCCACTACAGAACACCC ATCGCTTACTGCAAAACACCCGCCACCCACTACAGAACACCCACCGCCCA CGGCAGAACTTCCACCGTCCACTACAGAACACCCACCACCCACTACAGAA CACCCACCGCACACGGCAGAACTTCCAACGCCCATTACAGAACACCCACC GCCCACTACAAAACACCCGCCGCCCACTACAAAACACCCGCCGCCCAGCA ACAGGGAAGAGAATTTTCATGGCTATCACACTGTTTCTACACAAACTGAA AGCCATGAAGAAAACCAGAGAAACGATACAGGACAAGTTCATTCTGATAT TACTGTTCGACTTTATCTTCACATTTAGTTAAAAATGATCATCGACTTTG ATCGTGCATACAAAACCACCAGATCCTGTTATTACTGTTGGTTATGTGTT GTAATATGTGTACCAATTTATGATAAATTCTTGTTAAAATCTCATCTATT ATATTCATAATTTGTATGAATTGTCTTAACATTTTGGAAAGAAAGTAAAG TTGAAATTTCAAGTAGAACCTTTTAGTAAAGAATTTCCCAACAGAACTCT TTAAAAGCCAAATACAGTGTGTCCGTGAAACTCCTcaagataaaaatttt ttaaatatgctCCGCTTTTTCTCTTGTCTGTACacacaatttcaaaattc attgccgtagagggtctgttgtcattgtcttttctcatttgagatttttc aaatcggccgctgcgatggagtgttggcgAGAGAGGGGAGaggatgagag aagtgttgctatttattaATCATACTTTACCCACGTAtgggaattttttt aatcaaacagacaatgtgcacagagtgtactacgaagcgataaacgtgag tgTATACTCTGGTACAGATTACTTTCTCTCCAGACACACTGTAGATTTAT ATGAGATTTCGACACTCCCTGGCAGCAAAGTGGCTTTTTTACCATTAata tctttctcaaaaattctCTCTGGCAAATTTTCCCGATTTTATCAACCCTG TGAAATCCCCTGCCGTGGCTTATTCTAGTGATTTCTGATCCATAAGATGA ATACTACTTAAACCGTTTGCACATCAAAATCATCCAAATATCAAAACTCA TTAATAATAcagaaatttctttcattgtaccttatcggccaaaacttagt tggNGATTAATAATACAGGAATTTCTTTCATTGTACGTTATCGACCAAAA CTTAgttggccctaagtgactaaattttgacttggtgactaaaattaggg ccgactaaaaatttagaaatagccaaaacttagttattagtcgaccctta gtgactaaaattagggccgactaataattataaggccgactaagttttgg ccgataaggtatcccTTATACACCTAACTTCACAGCCAAATAGGCTTACA AAACCCCATCCATCCAAAAAATtatattacattttatttttctagCAAAT GGAAGCTGGTGGGAATATGTTAGGTGTAGAAAAATGGCAAGTAAACGTCC CAAAATGTTGGCCAATTGTTGATAAACATTCACCAGAGTAAGTGAGATTG TATAAATTCGAATAAAAGTCCCTGATGTTTATTTAGAtctagacggccca cttttcgccctgcctattctaattatgAATTGAAGTTGGCAgaaagttgg ctgtctaaagtttatgcattgccctcttttgacatCAATGCGATGTCTGC TTTcaacctttttcaagcaaacaTTTAACTGCCAAATTGCTTACtttaac aattagaataggcagggcagaaagtcagTCGTCTAAGCTTGAGCTTAATT ATTTAGTTTTGAGGAGAGCTGTTTATTCGAGGGCACGTTTAAaggaaggg gcgtttattaaatcattttcaaccaaCGGCAATTTGAAAAGCGACAGGTA CCCCACGagctacttgtttcaaataaacgagGGGCGTTTTAAAGAATAGT AATACGGTAATTTGTTGTTTAGCTATTTGCTCAatctgaaccaaaaaaaa tgttaataGATAAAATCTTGACAAAACAAACGACTCATAGGGATACAGAT ACACTTCGGTCCTTAAATCATCAACCCTTTTAAGGACGGGGGGGTAAATA AAACGATTGAGGAAGACCTGCAATTTGGATCCACAAGATCGAAGACGGTA AAAATGCGGCTTTAAAGGGATCTTTCGTCATCaagtttttccttaaaatt aaTTGTCTCACCTTCAGTGATCTAATTGAGCAATGGATACGAGCGAAATA CGAGCGACAAGAATTCACCGAAAATCAAGTGACTGAGGAATTAAGACCTT ATTGCGTAGGTAAGGTGGATCATTATTTCAGATCCTAAAATAAGACATTG TTCTCAATTGTACGGTAAAACAAGTAACCCTCTATTCCATATACTAAGTG CGGCTAATGTTAGTTAATTATCGGAGCCTTCTAAATTTGCATTTTTACTT ATTTTCAATGTTCGAATAACCTATTCGTTTTGATTGAAAACTATTTTAAG GTGTTaattttttatggattttcaggTTCGAAGTATGGTTTtctgatgaa aaaaaagaagaaggacAGTAAATGGCAACGCAGATTTTTCGTCTTATCCG CGGAGGAAGGATATCTCAAAATGTACATCAAACAAGGGGTGAGAAAGTCT TTACTGATATAATATTTATCCCAAATCGGGATGAAAAGATCAGTCGGTGC GCCAAAttgggcagattctcttacgaTAAGCCATGGTCTACAGTGTGCCA TGTGTGGAGGCATTTATAGTATGCATATACTGAAATAGGGATAGTATGTT AAAGGACATTTTGGACTCAAAATTACCAAAACCAGCCTCTAACTCTTATA TAAAATACATTACACATTATATCGGGAATAAagaactacacgtttttttt tatataaggaacacgtttataaggaactcgaggctcaaaatggttcaaaa aataaggaattgtttaggaactgctcatgctgagaataagaaaacaagtt ttaaggaacagtaagagatggttatccaaacttagcagctatgtaaataa ggaactcgataaggaactttgaggctgaaattctctgtaaaaataaaaaa ctccaggctcagagcaaagttaaggttccttataaaaaaaaaaacgtgta acttaCAGCTGCTACACGCGGTGCTTTCAATATTTGCtcgaatttttcga attttcttgaaCACTTTGTGATTCTACTTATTTGACTGTATTATACATCC CATTCATTTATTTTCCTCTTCATAGGACAATGAACCTAAACACAAGATTA GCATCAGTGGAATTAATTTAATGATGGTTCATAGTGACGTCACCGGAGAA AAACATAGCATGCTAATCACTTTTCCCATCATGCAAAACAACCAATCGAA ACAAAGGCATATTTATGTATATGCGGACAAAAGTTTTGTAAGTTAGGACC CAGATCCTTTACTTTGCTTCGTTTGACTGTTTCAATCAGCAAACATTTTT ACATAGGGTTACCATATAGTGGGTATCAAGCCCCCCTTAAAATGGCACCC CCCTCTATTTTCCAGGTTTCAGTTTAACCCCCTCTTTTTTCGACCTTTTA CTCACAAACTCTTACAATTTCTAactataaaaataataattgttgagaaa tttaaaaatgaatggaaaacaAAGACACTCTTTTGTAAATTGGCAAATCT TCCtagccccccccctaaaaaattaacccccctctttttttgtccaagcc accccttttatttggaatttttacaagatcatgttcagacgttacagatg aaaatagtggagcgaagtcttttcgatctgttttgctttgtagcGTCTTC TATTTTGACGTTTCCActtttgacgttcacacagtGTTTCGGAACTGTTT AGTTTTGGAGCAAAACGGAACGTAGCGGCTGAACGTGGTGTttgaccact cggccatcgctcCTAATAATAACACTGTTGAGGATATGACTCACTGCGAT GTAACAGAATTTAGACTTGCTCTCAATGAGAAAATAATAAAAGTAGAACA TTGGGTCCCAATGACACCATGCTTCTCAAAACTTAACTTATTTACATTGG AcatgatcaaaagttattcagCCAGCAGTAGACTCCAAAATTCCTTAATT AACTTTAAACAGGGTACCCAAAGAAATcctaaatttaaaattattatttt gaagatttttaggGTTCAGTCCCTTGTAAATAGCGCAACAACTTCACGGT GATCTTTAATCGGATTTAGCGGATTAGAAAAATGCTTAAATTTGGTCGTA AAGAAAGGGAGGGTATTTGATAGGGAAGTAAAAATTAGTTGTGCTCAAAT TGTACACATATGCGCTTTATTTATTAAAAGGATAGGGTCGTTTTGAAAAG TTACtttgaaattattacaaaaattaaactttaaatttcccagattttca aaaattattctgAAGATCGCGGTGCTTCCGCAACTCAAAAAtagttaaag gtttttttttaataagagtgatatcctTTGCTTACTCCCATCAAATTTAA TTCAcaagatttttggacctacctggaggtcctataaattaacctttgtt cgtccgtccgtccgtccgtccgtctgttaccagcttttctcgagattggt tcattagttttttctgatttttggcacaaagatgcaaaatggcaatgccc aaaatgtgacggagcccgattttcgaaaaaaaaaattttccggccgaaaa tgccggaaatatgccggaaaaaccggtttttttgacattttctcgagatt tcatcattagttttttctgattttttgcttaaagatgcgtattaacaatg cccaaaacatggtcaagtccgaaaatgccggaaatatgccggaaatcacc gtttttctggattttcattagactttttccatataattggttgttttttc attcaaaaacattattaatagcaatgcccaccatcaagcgtgtttcaatt ttcaataaaattgatttttaaagccGGAACTATTAAAAAATCACCGGAat aacctattttcgccggaaagacagtatttcttgaatttctcgagctgtac tttatatttttttatgaaattttgcacactgatgcaaaatgacaatacNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacggagcccgatt ttcgaaaaacatttttttccggccgaaaatgccagaaatatgccggaaaa accggttttttttacattttctcgaattttcatccttagttttttctgat ctttttgCAGAAatatgcgtattcgcaatgctcaaaacatgacagagttc gattttttgagaaaattttttttacagccgaaaatgccggaaatatgccg gaaatcgccgtttttgcagatttttattgggctttttcctaacatttctt tgttttttctcaaaaaaaaaacatcattgatagcaattcccaccatcaat catgattcgattgtcaataaaactgattttttttttctcaaagtagaaaa tgtcacggtagaggcgatggtttgagttttctagaaaccttatttattaa gctgtgtaTTTTCTGAaagtggattgtttttataaagaaaagcgtttata ATAATTTCTTTTAGCTTTTTCAATAATAGGGCTGATAATTTCTCCCAATA GACATGctttcattatatattttttattttgtccagttatgtcttatgtg tttcattgtttcaatgttcattgattagttttgataaccaggtaggtcca taaaagtatcacttgttcacattggattgacagggatgtggagcaagatt cgTCAGAAaggggaaaagaaaaatattttttgcttatagcagacactgtc ctgatataagatatgtgtctgatatgaaacgggaacataCTTATGtaaga taaaacctttaaaatagtATATATCATTTTGATGTTTCTTTCAGGAGATA GTTGACTGGTATCTAACAATTCGTGGAGCACGCCTGAAATTCTTAACACC CTATTTATACGAAGTTGAACGTCCAGTGGTATGTGATCATTTCTGGACTA AGGTCGTCTTTTAATATGGGCGTGGACTGATCTGGCTATTAGCTATTCGt gatatttatgacgtcatgTTATTTACGGAAGCACCCATAAAAGACCGggt gtttgccactaattttgacTTTAACAATTAAACTAGTGGCAAACGTACGG ATTATTTTGAGTGCTTTCATATAAAATATTACGTCACGAATAACATGAAT TGGCTACATGGCACGTCACtttgtttgacgtcaaaaagtttttcagcCAA TCTCCATCTATTAAagcatggaattattatagacactggaaaaacaatga gctgatttttgccaatttctcatgtacaagccttgtccgcagtaatgaca ttattgttcaccctccttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTGAGATTCAAACTC Gtctagttaattactaattatacgtcgttctgacgttttaaatttcgaga aagatggaaaaacatgttatgtataagaaattgaatgttaacaccagaaa tttttaaacttcaacctcaaaaaatccaccATGCCACCaccgtgccacca aaagattttcagaccacagtggagctatgagactcacatctaatatatgt caatctcagctcttctagGAGatatattggaaagatattcccaattcaaa attcgtgtcattataagcattttgtttgattttactcatctgatgatttt tttctcacatcagatttcataaatgtatccgtttggtattctagcattta ttttcaaacttttggccagcaaaagtacgaatagaaaaagttaaaaaact ttttagaaattagagtattaatcatttttcaaaatcagagtccttcgcgc cgccatgacagttgtcctttgcggataaagctagaacatcaattgttttc tgaaacaatagaaagacaatacttctctctccaccgtttcatttgatgtt tatccagagtctctataacaAATCCATGATTAAAGCTACTATTTCCAAAC AGACTTATTTAGCCAGGCCAGATAGGccagaaagaaaaacattttttaat acCTACGTTACCAACGTTTGTTCTTATTCAGCAAATTCTAGTGCCGTGGG AAGCATTTTAATATGGAGGGCTGAGGTATAGTGACACCGCAAAAGCTAAC TGTTGAggggattttgaaaatttaagttCCAGACGTCCGGAAAATGtact taaaatgaaaatttatttcgagAAAGCTTTTCTCAAGAAAAGTTATTcgt ggaaaaataaaaaaaagtggtTTGAGTCGACGTTCCCTTTATAATGCTAC TTGCAGTCTAAAGTTTATGCTCTCTTTTTAACCAAGCATACAGATGATGa tcatagttttttttaatttttctaggtTGACTTTTTGCAATCAAGGAAAT TTATCAAATCAGGATATCTACACAAAACTGGAGGCANt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038134XLOC_038134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060629-exon-scaffold_348-1491911889:147553..147872TCONS_00060629-exon-scaffold_348-1491911889:147553..147872Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:147553..147872TCONS_00060629-exon-scaffold_348-1510915933:147553..147872Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:147553..147872TCONS_00060629-exon-scaffold_348-1575043694:147553..147872Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:148462..148525TCONS_00060629-exon-scaffold_348-1491911889:148462..148525Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:148462..148525TCONS_00060629-exon-scaffold_348-1510915933:148462..148525Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:148462..148525TCONS_00060629-exon-scaffold_348-1575043694:148462..148525Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:155230..155332TCONS_00060629-exon-scaffold_348-1491911889:155230..155332Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:155230..155332TCONS_00060629-exon-scaffold_348-1510915933:155230..155332Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:155230..155332TCONS_00060629-exon-scaffold_348-1575043694:155230..155332Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:155877..156016TCONS_00060629-exon-scaffold_348-1491911889:155877..156016Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:155877..156016TCONS_00060629-exon-scaffold_348-1510915933:155877..156016Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:155877..156016TCONS_00060629-exon-scaffold_348-1575043694:155877..156016Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:160598..160689TCONS_00060629-exon-scaffold_348-1491911889:160598..160689Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:160598..160689TCONS_00060629-exon-scaffold_348-1510915933:160598..160689Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:160598..160689TCONS_00060629-exon-scaffold_348-1575043694:160598..160689Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:161370..161461TCONS_00060629-exon-scaffold_348-1491911889:161370..161461Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:161370..161461TCONS_00060629-exon-scaffold_348-1510915933:161370..161461Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:161370..161461TCONS_00060629-exon-scaffold_348-1575043694:161370..161461Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:161678..161790TCONS_00060629-exon-scaffold_348-1491911889:161678..161790Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:161678..161790TCONS_00060629-exon-scaffold_348-1510915933:161678..161790Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:161678..161790TCONS_00060629-exon-scaffold_348-1575043694:161678..161790Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:162428..162589TCONS_00060629-exon-scaffold_348-1491911889:162428..162589Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:162428..162589TCONS_00060629-exon-scaffold_348-1510915933:162428..162589Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:162428..162589TCONS_00060629-exon-scaffold_348-1575043694:162428..162589Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:165147..165230TCONS_00060629-exon-scaffold_348-1491911889:165147..165230Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:165147..165230TCONS_00060629-exon-scaffold_348-1510915933:165147..165230Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:165147..165230TCONS_00060629-exon-scaffold_348-1575043694:165147..165230Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1491911889:166828..166890TCONS_00060629-exon-scaffold_348-1491911889:166828..166890Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1510915933:166828..166890TCONS_00060629-exon-scaffold_348-1510915933:166828..166890Clytia hemisphaericaexon
TCONS_00060629-exon-scaffold_348-1575043694:166828..166890TCONS_00060629-exon-scaffold_348-1575043694:166828..166890Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:147553..166890 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.25528 2.93691 1.55968 1.0561 7.88155 5.8759 4.33029 6.5123 12.6754 11.5819 11.3094 7.02928 1.04779 0.608509 4.39508 3.51708 0.0318538 2.78526 1.0542 2.15815 2.8279 0.00921922 0.781862 1.04958 5.99772 1.85904 4.01342 2.68183 2.03425 2.58422
Blast
BLAST of TCONS_00060629 vs. Swiss-Prot (Human)
Match: ADAP2 (Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens GN=ADAP2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.726e-45
Identity = 106/275 (38.55%), Postives = 154/275 (56.00%), Query Frame = 1
Query:  412 EQCAHRLQELMRIP--GNSQCADCGTEEPEPNFVSLNLGLFICIKCSGHHRALGTRFSVTKSILLDTFDDAKVKQMEAGGNMLGVEKWQVNVPKCWPIVDKHSPDDLIEQWIRAKYERQEFTENQVTEELRPYCVGSKYGFLMXXXXXDSKWQRRFFVLSAEEGYLKMYIKQGDNEPKHKISISGINLMMVHSDVTGEKHSMLITFPIMQNNQSKQRHIYVYADKSFEIVDWYLTIRGARLKFLTPYLYEV-ERPVVDFLQSRKFIKSGYLHKTG 1227
            E+   RL EL+R P  GN+ CADCG  +P  ++ S  LG+FIC+ C G HR      S  KS+ LD +DD+ V+ M   GN+    K++  VP  + I   +    L EQWIRAKYER+EF  +  T  L     G++ GFL K+ + +S++ RR FVL A EG LK + K+    PK  ISI  +N     ++  G  H + IT+          R+++VY +   EIVDW+  +R ARL++L     E+ E  +V FL +R ++K G++ KTG
Sbjct:    5 ERNKKRLLELLRAPDTGNAHCADCGAADP--DWASYKLGIFICLNCCGVHRNFPD-ISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFMADGETISL----PGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLN-ATFQTEKIGHPHGLQITY----RRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFL-TRNYLKQGFMEKTG 266          
The following BLAST results are available for this feature:
BLAST of TCONS_00060629 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAP21.726e-4538.55Arf-GAP with dual PH domain-containing protein 2 O... [more]
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