TCONS_00060594 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060594
Unique NameTCONS_00060594
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3521

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060594 ID=TCONS_00060594|Name=TCONS_00060594|organism=Clytia hemisphaerica|type=transcript|length=3521bp
ACAGACATCGAAAGGTTTTGGTTTAACCTACCCACCACGACGCACATCCC
GAATCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTG
TCATCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAG
ACGTCGGACACCACATCACTCTGTGAGTAAAAGCGACACGTATCAATTTT
CTTTGGACGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCA
CATTCTGAATCCGACTCAAGGttttcaagtGAGAGAGGTTCAATATCAGA
AGACACAGCTTCGACATCCATGAAGTCATTTTTAAATGATAGAGTCTTAC
CACCAATGAATCTAATTTCTgataaacaacaacaaaaacaagagGAGCGG
ACGTCGACGTCGTCCGACAATTCACGTAATTTGCGCCCGTTTTCCTGCCA
CGTTTGTAGTTTCCGTGCGTGCGAGAAATACAATCTTTTACGTCACTACG
ACAACAGGCATTCGTTACGTAAACGTGACGTCAATATCGTGTATCCGTGT
CCTGTGTGTCAACGCACGTTCAAAGGGAAAACGTACTTGATAACTCATCT
TGAAACTCATGCTGAGTCAATCTCAAAACCCTACCGTTGCTCTATTTGTC
AGGCGTCGTATGACAATGTGACGGATCTGGAACGTCATCATTTGTCTCAC
GAATTTGATCTGACCACGGACCCAGGTGAGGAGGATCAGGATGACGGTAA
ACCGAAAGAACGAACCTCTTTACTTCAATGTCAAAAATGCTCTCTTGGTT
TCGATTCACTAGAATCTTTACAGCGTCACCAAAGACGCCATATTGAAACA
ATCGGCACCGGTACATCGGCCGTAACGACGGTAGCGACGTCAACGAACCA
AGCATTTACTTTCAAACCGCCGACGAAAAAGCCGAAAAAGAATGGGAATA
TTAAAGGACTCAAAAGAAAAcccatcaaagaaaacaaagccGAACGAAAA
CACGATAAAGCGAAATTTAGAAAACGTCTCACAACAGGCCCAGAATTTTT
AAATTGTCCATATTGTTCTAGTcaattctcaaataaaaacttcAACGGAA
TTACGAACTTAAACATTCACTTACTATTAAAACACAAGAACACGATCAAA
GCGAAACCTCGTACTCACCTTCACAAATGTCCGAAATGTGTCAAATTGTT
TACGTCCCAGACCTCTTTAGATGTGCATTTACAGAAAAAACATGGTATTG
AGTCTGACGAAAGCGCTCAAGGTAAGCAAAAATCGCCGAGAAAGCGAAAA
GAAATATCTGAAAGTGAGGTAAAACAAGACCTAGGAGAAGAACATCAGTC
CGCCGTCTCCACGAACATCATTAAAGGTGAAAGTGTGAATAAAAGTACTG
TGAATTCTAATAATAAAACTGATCGAAAAGCTAGACTGCGGAAACGTCTC
GCAAAGAAACGATCCCAACTCAAATCCAAAATCATCGTTACGAGAACCCG
CTCACAAAGCCCCGTTAAAGCTGCCTCGTCCTCATCAAACGGTGATGACG
TGCCGAAAACATCGAAATTCAATAAACGGCGAGATGGCGGTGCGTCAAAT
ACGTCACAATCGGGTTCTGTATTCCGTAGAAAGGGACGTCCGCCGGGTAT
CGGGAAAGTCATTGCCGGTAGAATCTTGAAGAAGTACCGATGTCCGCATT
GTCACTTGACCTATATCCATCAACCGAGTTTCATTAATCACCAACGTACT
TGTAAATCCTTGAAAGCTACCGCTCTTCAGTTGACCAATAAAAGACTCAT
GAAATCATAGATTGAAAATTATTAGGTTTGGGCGTAAAATCTGAGAGTCC
TCTTGCGCCTTTGGTTGTGTCGGTGTCAACCCTCCATGGATTCCAGCCAT
TCCAGCCCTTGAAactctcttaattatatttttctttttctttgttaata
atTATTTGTCTAGTATTTATCTAACCGACTAGTCTCGAATCAAGACAATA
TCCATCACTGAATCTTCCAGGCTAGGCGATCTTCGAAAATGACATGACAA
GCGATCTAgctatgaaaattttgattcaagAAATGCACCAAAGCCGCAAG
TCATTTTCAAAACTATTCCGGGCGTTCATTAATCCTCATAGttgggtcgt
ttagcataatttacaggaaaaaaaaattttcgacctGAAACTTTCTctag
accttctctataggatgcttatgtcTCAGAAAAAATCCCCTATAATCCCA
CTGGTGATCCTTCTCAAGATAATTCACACAGAAGATGCAATTTATGGCCA
ATTTCAgacaaaatgtggcgaaaattGGAACTTGCGCGTGAAATATCTAA
GGAAATCGGCTATGACCGTTTGAAGGTCTTCTAtgtagtttttcgagagc
tttcgaatggtatacatgatattgtctgaaaataaggtttgaaattttca
aaaaatttcgcccttagggttttgcctgggggaaatagaaattgcccaaa
aaagggatgttccaccagtgggattttagggcaTTTTTTCCTGAGGCTTA
AGCATCCcgtagagaaggtctggagaaagtttcagctagatattattttt
ttcctacaaacagccttgtatttttgtaacacgaccataCTATCATTTTT
TGCCAAGGATAAAATCAttcagtttgtttttttctccccagaaatttttc
acaattttagaatttataCTATAGAAATGTttacttatttttttagaatt
gagttattttaaagtataattttttatGCCATAATATTGTATTATgtttt
ttaagtcatttttttcaattttcgatgattattttgttttcattattgGT
TTTGATTTTCTGTCTGTGCATATATGAGAATATATAGTTTTATCAATATA
GTTTTTCTATTATATTTTAGGCCGTAGGTAACTCGAGGCCCGCATATTTT
CGCTATTTCTTTACAGATACACTTTTCCCTCaagaattgttttcaaaaat
tggataTTTGGTCCTTAAGTAATATCATTTTTGATAGTTCATATTTTGAA
GACATTTCTCTCTCTGGtataaatctttttcaagcGTGTAgtgtagtgca
gtggtagagcatccggctacggttcccatccgggtcataccaaagattct
caaaatggtacttgatgcctctctgcttgatgctcagcaattaagagaag
gatcaagggtcaGTGGAGCAAACAAGGGAGAAAGTGTGGCGCCCTCCCTT
ACCTTCGGATAGATAGCTTTTGATAGAGTagtcttcgggtcgcctccgac
tgcggtcgcagacttaaactttttcaattGTGTTTTTCAGCACTAATCAG
GAGAACATTTGAAAAAGTGTGAAATCCATTAAACTGTAAATCAAAAGTGG
TATTATCACTCTCTCTCTAGATTACCCAAAATGCATTTGTAGGAAATATT
ATaatctttaatttttctttttaagcgATTAGTTTCCTTTATAATATTAT
ATCACAAATTATGAATTGAAT
Run BLAST on NCBI

protein sequence of TCONS_00060594-protein

>TCONS_00060594-protein ID=TCONS_00060594-protein|Name=TCONS_00060594-protein|organism=Clytia hemisphaerica|type=polypeptide|length=602bp
QTSKGFGLTYPPRRTSRIGTTSRNDSHRFIEPLSSYSPTTSGSMAGYLTR
RRTPHHSVSKSDTYQFSLDGDEDFKTPSCSYSAHSESDSRFSSERGSISE
DTASTSMKSFLNDRVLPPMNLISDKQQQKQEERTSTSSDNSRNLRPFSCH
VCSFRACEKYNLLRHYDNRHSLRKRDVNIVYPCPVCQRTFKGKTYLITHL
ETHAESISKPYRCSICQASYDNVTDLERHHLSHEFDLTTDPGEEDQDDGK
PKERTSLLQCQKCSLGFDSLESLQRHQRRHIETIGTGTSAVTTVATSTNQ
AFTFKPPTKKPKKNGNIKGLKRKPIKENKAERKHDKAKFRKRLTTGPEFL
NCPYCSSQFSNKNFNGITNLNIHLLLKHKNTIKAKPRTHLHKCPKCVKLF
TSQTSLDVHLQKKHGIESDESAQGKQKSPRKRKEISESEVKQDLGEEHQS
AVSTNIIKGESVNKSTVNSNNKTDRKARLRKRLAKKRSQLKSKIIVTRTR
SQSPVKAASSSSNGDDVPKTSKFNKRRDGGASNTSQSGSVFRRKGRPPGI
GKVIAGRILKKYRCPHCHLTYIHQPSFINHQRTCKSLKATALQLTNKRLM
KS
Run BLAST on NCBI

transcript from alignment at scaffold_345:112653..118309-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060594 ID=TCONS_00060594|Name=TCONS_00060594|organism=Clytia hemisphaerica|type=transcript|length=5657bp|location=Sequence derived from alignment at scaffold_345:112653..118309- (Clytia hemisphaerica)
ACAGACATCGAAAGGTTTTGGTTTAACCTACCCACCACGACGCACATCCC GAATCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTG TCATCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAG ACGTCGGACACCACATCACTCTGTGAGTAAAAGCGACACGTATCAATTTT CTTTGGACGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCA CATTCTGAATCCGACTCAAGGGTAAACACAACTTGCTTTTATTTATGACC TTTTCTACAGTTGACTCTCGCTAATAATTAGAACCCGAATGAGTTATTCA TGATATGAACCACTGCAATGACTTCACGAAATTATGCAACCTTTCTGTTT TTGTTCCACCCAATACGTCACTTTTTCTATTGTTTAAGTGACGTATTGGG TGGAACATTTTAAAAGCTCTCAGAAGACTCTCCAGTGTTGCATATCATGA ATATAAAGTATTTTAAGTTATGTTTTTTCCGTTAAGGAAATTAGTTTGAA TAACTTAGGAAGGTTCGAATAATAGAAGTTCGAATTATTAGCGAGAGTCT ACTTCATTTACAAAAAACTTCGTCTGCAGGCATTTCACCTTTTTATCGTT TTAAACAAACAAACATTAATAGAAGGGACAAATTATTTTCTAAATAGACT GGATTCGTTTATGCAAACTGAAATTATCCCGTATTAATTGGGCTATCTCA GAAAATACTTGTACCCTATATGTTTGGGGTCTTTTATTTGGAAAAGTGAC CCTCCTGAATTTTTTTTTCATTTTTCAGGAGCCACTTAGCTTTTTTTACT CACACTGGATTTTCAACCTAATTTTAATGACCACCCTGGATTTTTTTATT TTCCAGACCTTCCTGGACCTCACACCTCCTCAACAAAAGGGGTGAAGACT ATTTCTGGAATAGCCCATTATCATACTCGTCTTACTGTAATACCCGGATT ATTAAACGACACAAGTCTATGTTGATCGTTAGAGTGATTGTAAAAGTTTT GTGCTTTGGAACCCCCGTTCGTGATTGCAAAATTCTTACTTACTACACAC ACTACACACGAAAATACTGTCCCTTCTATGTACTTTACGTCCCTGAATAC CTCTAGAAAGTTAATCATTCTTTTTGCCTTTGATTTATCGAGCTTTTTTA AAAAGTACACACACATAAGTAGTTGTGGTCTCTTGTGATCAGTACTCTTA CGCCCACGCATGCATACACGCTTTTTTTTATAAGAATATCTTTCTATAAG AATATCAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTCTAGGGTGAA TTCCACAGAATTTGATAAGAATACAGTCATTTTGTATTCGGTTAATAGAA AAAACTGCTTCCTTTGTTAGAGATAAATTGAAGCTTTGAGAAAGAAATGT AATTTTAACCCAAATGTTCACTCTAAATTCCAAAACTCTCAAATTGATCA TTTCTCATGTTTGTAAAAAAGTCAAGTCTAAAACAGTAAGAAAAGGTTAA GAATATCTCATCCACAATTTTGGCACTTTCTTAAGAATACTTGACCCTCA TCCAAAGTACACTATTCTTATAAAAAAAAGCGTGTAACACACAAACGATT AAGTGACCGCTCATTTCAGCTTTCCTATAGAAACCAGTCTAATAATTAAT GATTTACTTGCATCTGTAACATTACACTCTCTATTTTTTAAAGTTTTCAA GTGAGAGAGGTTCAATATCAGAAGACACAGCTTCGACATCCATGAAGTCA TTTTTAAATGATAGAGGTTTGACTGATTGATTTTAATGATATAGAGAATA TAAAAATGCTAGCTTTAATTTTATCTAACACTCGCAGGGAACCTAAATGA AGGGAAAATAATCTCTCATTTTTTAACAAGGGAAAGAACAACTCCCACCA CCTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAG TGATTTTACAAATTTCCCCCTACTACAAGGGAAAGAACAACTCCCGCCAC CACAAATTTTGAGAAATTCTCTTATTTTTTCTGCTTTCTCAGTGTAAAGG AGTGCCTCTTTTTATATCTTTTAAATTCGTTAGAGTAGCCTTTTTAATGA AATGCTTTTCATGTGTTTTTTCTTTGTTCTAGATCAAAGATTTCTTTGTT TTCTCCCACTTTTCTGATATTTTCTTGTTTCTATAATGGGCTTTTCCAGA AAAAATTTGAATATGGGGGGTGGAGGATATAACAATATTCAGTGATTTAC CCCCCGGACAAGCATCAGTTGACCCCCCGGACAACCCAAATTACCCCTGA ACAGAGCAAATTTAAACCCCCCTCCCCCGGACAAGGCAAATTTTGATTAT TTTTCGCTACCCCCAGACAATATACTCGACCCCCATGTACGGACATTTTC TGGAAGAGTCCAATCTCCTTGTATTTTCAGTCTTACCACCAATGAATCTA ATTTCTGATAAACAACAACAAAAACAAGAGGAGCGGACGTCGACGTCGTC CGACAATTCACGTAATTTGCGCCCGTTTTCCTGCCACGTTTGTAGTTTCC GTGCGTGCGAGAAATACAATCTTTTACGTCACTACGACAACAGGCATTCG TTACGTAAACGTGACGTCAATATCGTGTATCCGTGTCCTGTGTGTCAACG CACGTTCAAAGGGAAAACGTACTTGATAACTCATCTTGAAACTCATGCTG AGTCAATCTCAAAACCCTACCGTTGCTCTATTTGTCAGGCGTCGTATGAC AATGTGACGGATCTGGAACGTCATCATTTGTCTCACGAATTTGATCTGAC CACGGACCCAGGTGAGGAGGATCAGGATGACGGTAAACCGAAAGAACGAA CCTCTTTACTTCAATGTCAAAAATGCTCTCTTGGTTTCGATTCACTAGAA TCTTTACAGCGTCACCAAAGACGCCATATTGAAACAATCGGCACCGGTAC ATCGGCCGTAACGACGGTAGCGACGTCAACGAACCAAGCATTTACTTTCA AACCGCCGACGAAAAAGCCGAAAAAGAATGGGAATATTAAAGGACTCAAA AGAAAACCCATCAAAGAAAACAAAGCCGAACGAAAACACGATAAAGCGAA ATTTAGAAAACGTCTCACAACAGGCCCAGAATTTTTAAATTGTCCATATT GTTCTAGTCAATTCTCAAATAAAAACTTCAACGGAATTACGAACTTAAAC ATTCACTTACTATTAAAACACAAGAACACGATCAAAGCGAAACCTCGTAC TCACCTTCACAAATGTCCGAAATGTGTCAAATTGTTTACGTCCCAGACCT CTTTAGATGTGCATTTACAGAAAAAACATGGTATTGAGTCTGACGAAAGC GCTCAAGGTAAGCAAAAATCGCCGAGAAAGCGAAAAGAAATATCTGAAAG TGAGGTAAAACAAGACCTAGGAGAAGAACATCAGTCCGCCGTCTCCACGA ACATCATTAAAGGTGAAAGTGTGAATAAAAGTACTGTGAATTCTAATAAT AAAACTGATCGAAAAGCTAGACTGCGGAAACGTCTCGCAAAGAAACGATC CCAACTCAAATCCAAAATCATCGTTACGAGAACCCGCTCACAAAGCCCCG TTAAAGCTGCCTCGTCCTCATCAAACGGTGATGACGTGCCGAAAACATCG AAATTCAATAAACGGCGAGATGGCGGTGCGTCAAATACGTCACAATCGGG TTCTGTATTCCGTAGAAAGGGACGTCCGCCGGGTATCGGGAAAGTCATTG CCGGTAGAATCTTGAAGAAGTACCGATGTCCGCATTGTCACTTGACCTAT ATCCATCAACCGAGTTTCATTAATCACCAACGTACTTGTAAATCCTTGAA AGCTACCGCTCTTCAGTTGACCAATAAAAGACTCATGAAATCATAGATTG AAAATTATTAGGTTTGGGCGTAAAATCTGAGAGTCCTCTTGCGCCTTTGG TTGTGTCGGTGTCAACCCTCCATGGATTCCAGCCATTCCAGCCCTTGAAA CTCTCTTAATTATATTTTTCTTTTTCTTTGTTAATAATTATTTGTCTAGT ATTTATCTAACCGACTAGTCTCGAATCAAGACAATATCCATCACTGAATC TTCCAGGCTAGGCGATCTTCGAAAATGACATGACAAGCGATCTAGCTATG AAAATTTTGATTCAAGAAATGCACCAAAGCCGCAAGTCATTTTCAAAACT ATTCCGGGCGTTCATTAATCCTCATAGTTGGGTCGTTTAGCATAATTTAC AGGAAAAAAAAATTTTCGACCTGAAACTTTCTCTAGACCTTCTCTATAGG ATGCTTATGTCTCAGAAAAAATCCCCTATAATCCCACTGGTGATCCTTCT CAAGATAATTCACACAGAAGATGCAATTTATGGCCAATTTCAGACAAAAT GTGGCGAAAATTGGAACTTGCGCGTGAAATATCTAAGGAAATCGGCTATG ACCGTTTGAAGGTCTTCTATGTAGTTTTTCGAGAGCTTTCGAATGGTATA CATGATATTGTCTGAAAATAAGGTTTGAAATTTTCAAAAAATTTCGCCCT TAGGGTTTTGCCTGGGGGAAATAGAAATTGCCCAAAAAAGGGATGTTCCA CCAGTGGGATTTTAGGGCATTTTTTCCTGAGGCTTAAGCATCCCGTAGAG AAGGTCTGGAGAAAGTTTCAGCTAGATATTATTTTTTTCCTACAAACAGC CTTGTATTTTTGTAACACGACCATACTATCATTTTTTGCCAAGGATAAAA TCATTCAGTTTGTTTTTTTCTCCCCAGAAATTTTTCACAATTTTAGAATT TATACTATAGAAATGTTTACTTATTTTTTTAGAATTGAGTTATTTTAAAG TATAATTTTTTATGCCATAATATTGTATTATGTTTTTTAAGTCATTTTTT TCAATTTTCGATGATTATTTTGTTTTCATTATTGGTTTTGATTTTCTGTC TGTGCATATATGAGAATATATAGTTTTATCAATATAGTTTTTCTATTATA TTTTAGGCCGTAGGTAACTCGAGGCCCGCATATTTTCGCTATTTCTTTAC AGATACACTTTTCCCTCAAGAATTGTTTTCAAAAATTGGATATTTGGTCC TTAAGTAATATCATTTTTGATAGTTCATATTTTGAAGACATTTCTCTCTC TGGTATAAATCTTTTTCAAGCGTGTAGTGTAGTGCAGTGGTAGAGCATCC GGCTACGGTTCCCATCCGGGTCATACCAAAGATTCTCAAAATGGTACTTG ATGCCTCTCTGCTTGATGCTCAGCAATTAAGAGAAGGATCAAGGGTCAGT GGAGCAAACAAGGGAGAAAGTGTGGCGCCCTCCCTTACCTTCGGATAGAT AGCTTTTGATAGAGTAGTCTTCGGGTCGCCTCCGACTGCGGTCGCAGACT TAAACTTTTTCAATTGTGTTTTTCAGCACTAATCAGGAGAACATTTGAAA AAGTGTGAAATCCATTAAACTGTAAATCAAAAGTGGTATTATCACTCTCT CTCTAGATTACCCAAAATGCATTTGTAGGAAATATTATAATCTTTAATTT TTCTTTTTAAGCGATTAGTTTCCTTTATAATATTATATCACAAATTATGA ATTGAAT

Coding sequence (CDS) from alignment at scaffold_345:112653..118309-

>TCONS_00060594 ID=TCONS_00060594|Name=TCONS_00060594|organism=Clytia hemisphaerica|type=CDS|length=5427bp|location=Sequence derived from alignment at scaffold_345:112653..118309- (Clytia hemisphaerica)
TCTTACCACCAATGAATCTAATTTCTGATAAACAACAACAAAAACAAGAG
GAGCGGACGTCGACGTCGTCCGACAATTCACGTAATTTGCGCCCGTTTTC
CTGCCACGTTTGTAGTTTCCGTGCGTGCGAGAAATACAATCTTTTACGTC
ACTACGACAACAGGCATTCGTTACGTAAACGTGACGTCAATATCGTGTAT
CCGTGTCCTGTGTGTCAACGCACGTTCAAAGGGAAAACGTACTTGATAAC
TCATCTTGAAACTCATGCTGAGTCAATCTCAAAACCCTACCGTTGCTCTA
TTTGTCAGGCGTCGTATGACAATGTGACGGATCTGGAACGTCATCATTTG
TCTCACGAATTTGATCTGACCACGGACCCAGGTGAGGAGGATCAGGATGA
CGGTAAACCGAAAGAACGAACCTCTTTACTTCAATGTCAAAAATGCTCTC
TTGGTTTCGATTCACTAGAATCTTTACAGCGTCACCAAAGACGCCATATT
GAAACAATCGGCACCGGTACATCGGCCGTAACGACGGTAGCGACGTCAAC
GAACCAAGCATTTACTTTCAAACCGCCGACGAAAAAGCCGAAAAAGAATG
GGAATATTAAAGGACTCAAAAGAAAACCCATCAAAGAAAACAAAGCCGAA
CGAAAACACGATAAAGCGAAATTTAGAAAACGTCTCACAACAGGCCCAGA
ATTTTTAAATTGTCCATATTGTTCTAGTCAATTCTCAAATAAAAACTTCA
ACGGAATTACGAACTTAAACATTCACTTACTATTAAAACACAAGAACACG
ATCAAAGCGAAACCTCGTACTCACCTTCACAAATGTCCGAAATGTGTCAA
ATTGTTTACGTCCCAGACCTCTTTAGATGTGCATTTACAGAAAAAACATG
GTATTGAGTCTGACGAAAGCGCTCAAGGTAAGCAAAAATCGCCGAGAAAG
CGAAAAGAAATATCTGAAAGTGAGGTAAAACAAGACCTAGGAGAAGAACA
TCAGTCCGCCGTCTCCACGAACATCATTAAAGGTGAAAGTGTGAATAAAA
GTACTGTGAATTCTAATAATAAAACTGATCGAAAAGCTAGACTGCGGAAA
CGTCTCGCAAAGAAACGATCCCAACTCAAATCCAAAATCATCGTTACGAG
AACCCGCTCACAAAGCCCCGTTAAAGCTGCCTCGTCCTCATCAAACGGTG
ATGACGTGCCGAAAACATCGAAATTCAATAAACGGCGAGATGGCGGTGCG
TCAAATACGTCACAATCGGGTTCTGTATTCCGTAGAAAGGGACGTCCGCC
GGGTATCGGGAAAGTCATTGCCGGTAGAATCTTGAAGAAGTACCGATGTC
CGCATTGTCACTTGACCTATATCCATCAACCGAGTTTCATTAATCACCAA
CGTACTTGTAAATCCTTGAAAGCTACCGCTCTTCAGTTGACCAATAAAAG
ACTCATGAAATCATAGTTTTCAAGTGAGAGAGGTTCAATATCAGAAGACA
CAGCTTCGACATCCATGAAGTCATTTTTAAATGATAGAGCAGACATCGAA
AGGTTTTGGTTTAACCTACCCACCACGACGCACATCCCGAATCGGAACCA
CCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTGTCATCATATTCA
CCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAGACGTCGGACACC
ACATCACTCTGTGAGTAAAAGCGACACGTATCAATTTTCTTTGGACGGTG
ACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCACATTCTGAATCC
GACTCAAGGTCTTACCACCAATGAATCTAATTTCTGATAAACAACAACAA
AAACAAGAGGAGCGGACGTCGACGTCGTCCGACAATTCACGTAATTTGCG
CCCGTTTTCCTGCCACGTTTGTAGTTTCCGTGCGTGCGAGAAATACAATC
TTTTACGTCACTACGACAACAGGCATTCGTTACGTAAACGTGACGTCAAT
ATCGTGTATCCGTGTCCTGTGTGTCAACGCACGTTCAAAGGGAAAACGTA
CTTGATAACTCATCTTGAAACTCATGCTGAGTCAATCTCAAAACCCTACC
GTTGCTCTATTTGTCAGGCGTCGTATGACAATGTGACGGATCTGGAACGT
CATCATTTGTCTCACGAATTTGATCTGACCACGGACCCAGGTGAGGAGGA
TCAGGATGACGGTAAACCGAAAGAACGAACCTCTTTACTTCAATGTCAAA
AATGCTCTCTTGGTTTCGATTCACTAGAATCTTTACAGCGTCACCAAAGA
CGCCATATTGAAACAATCGGCACCGGTACATCGGCCGTAACGACGGTAGC
GACGTCAACGAACCAAGCATTTACTTTCAAACCGCCGACGAAAAAGCCGA
AAAAGAATGGGAATATTAAAGGACTCAAAAGAAAACCCATCAAAGAAAAC
AAAGCCGAACGAAAACACGATAAAGCGAAATTTAGAAAACGTCTCACAAC
AGGCCCAGAATTTTTAAATTGTCCATATTGTTCTAGTCAATTCTCAAATA
AAAACTTCAACGGAATTACGAACTTAAACATTCACTTACTATTAAAACAC
AAGAACACGATCAAAGCGAAACCTCGTACTCACCTTCACAAATGTCCGAA
ATGTGTCAAATTGTTTACGTCCCAGACCTCTTTAGATGTGCATTTACAGA
AAAAACATGGTATTGAGTCTGACGAAAGCGCTCAAGGTAAGCAAAAATCG
CCGAGAAAGCGAAAAGAAATATCTGAAAGTGAGGTAAAACAAGACCTAGG
AGAAGAACATCAGTCCGCCGTCTCCACGAACATCATTAAAGGTGAAAGTG
TGAATAAAAGTACTGTGAATTCTAATAATAAAACTGATCGAAAAGCTAGA
CTGCGGAAACGTCTCGCAAAGAAACGATCCCAACTCAAATCCAAAATCAT
CGTTACGAGAACCCGCTCACAAAGCCCCGTTAAAGCTGCCTCGTCCTCAT
CAAACGGTGATGACGTGCCGAAAACATCGAAATTCAATAAACGGCGAGAT
GGCGGTGCGTCAAATACGTCACAATCGGGTTCTGTATTCCGTAGAAAGGG
ACGTCCGCCGGGTATCGGGAAAGTCATTGCCGGTAGAATCTTGAAGAAGT
ACCGATGTCCGCATTGTCACTTGACCTATATCCATCAACCGAGTTTCATT
AATCACCAACGTACTTGTAAATCCTTGAAAGCTACCGCTCTTCAGTTGAC
CAATAAAAGACTCATGAAATCATAGTTTTCAAGTGAGAGAGGTTCAATAT
CAGAAGACACAGCTTCGACATCCATGAAGTCATTTTTAAATGATAGAGCA
GACATCGAAAGGTTTTGGTTTAACCTACCCACCACGACGCACATCCCGAA
TCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAACCTCTGTCA
TCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCTGACGAGACG
TCGGACACCACATCACTCTGTGAGTAAAAGCGACACGTATCAATTTTCTT
TGGACGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTATTCAGCACAT
TCTGAATCCGACTCAAGGTCTTACCACCAATGAATCTAATTTCTGATAAA
CAACAACAAAAACAAGAGGAGCGGACGTCGACGTCGTCCGACAATTCACG
TAATTTGCGCCCGTTTTCCTGCCACGTTTGTAGTTTCCGTGCGTGCGAGA
AATACAATCTTTTACGTCACTACGACAACAGGCATTCGTTACGTAAACGT
GACGTCAATATCGTGTATCCGTGTCCTGTGTGTCAACGCACGTTCAAAGG
GAAAACGTACTTGATAACTCATCTTGAAACTCATGCTGAGTCAATCTCAA
AACCCTACCGTTGCTCTATTTGTCAGGCGTCGTATGACAATGTGACGGAT
CTGGAACGTCATCATTTGTCTCACGAATTTGATCTGACCACGGACCCAGG
TGAGGAGGATCAGGATGACGGTAAACCGAAAGAACGAACCTCTTTACTTC
AATGTCAAAAATGCTCTCTTGGTTTCGATTCACTAGAATCTTTACAGCGT
CACCAAAGACGCCATATTGAAACAATCGGCACCGGTACATCGGCCGTAAC
GACGGTAGCGACGTCAACGAACCAAGCATTTACTTTCAAACCGCCGACGA
AAAAGCCGAAAAAGAATGGGAATATTAAAGGACTCAAAAGAAAACCCATC
AAAGAAAACAAAGCCGAACGAAAACACGATAAAGCGAAATTTAGAAAACG
TCTCACAACAGGCCCAGAATTTTTAAATTGTCCATATTGTTCTAGTCAAT
TCTCAAATAAAAACTTCAACGGAATTACGAACTTAAACATTCACTTACTA
TTAAAACACAAGAACACGATCAAAGCGAAACCTCGTACTCACCTTCACAA
ATGTCCGAAATGTGTCAAATTGTTTACGTCCCAGACCTCTTTAGATGTGC
ATTTACAGAAAAAACATGGTATTGAGTCTGACGAAAGCGCTCAAGGTAAG
CAAAAATCGCCGAGAAAGCGAAAAGAAATATCTGAAAGTGAGGTAAAACA
AGACCTAGGAGAAGAACATCAGTCCGCCGTCTCCACGAACATCATTAAAG
GTGAAAGTGTGAATAAAAGTACTGTGAATTCTAATAATAAAACTGATCGA
AAAGCTAGACTGCGGAAACGTCTCGCAAAGAAACGATCCCAACTCAAATC
CAAAATCATCGTTACGAGAACCCGCTCACAAAGCCCCGTTAAAGCTGCCT
CGTCCTCATCAAACGGTGATGACGTGCCGAAAACATCGAAATTCAATAAA
CGGCGAGATGGCGGTGCGTCAAATACGTCACAATCGGGTTCTGTATTCCG
TAGAAAGGGACGTCCGCCGGGTATCGGGAAAGTCATTGCCGGTAGAATCT
TGAAGAAGTACCGATGTCCGCATTGTCACTTGACCTATATCCATCAACCG
AGTTTCATTAATCACCAACGTACTTGTAAATCCTTGAAAGCTACCGCTCT
TCAGTTGACCAATAAAAGACTCATGAAATCATAGTTTTCAAGTGAGAGAG
GTTCAATATCAGAAGACACAGCTTCGACATCCATGAAGTCATTTTTAAAT
GATAGAGCAGACATCGAAAGGTTTTGGTTTAACCTACCCACCACGACGCA
CATCCCGAATCGGAACCACCTCAAGGAACGACAGTCACCGATTCATAGAA
CCTCTGTCATCATATTCACCTACTACCAGTGGTTCAATGGCGGGCTACCT
GACGAGACGTCGGACACCACATCACTCTGTGAGTAAAAGCGACACGTATC
AATTTTCTTTGGACGGTGACGAAGATTTCAAGACGCCTTCGTGTAGCTAT
TCAGCACATTCTGAATCCGACTCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038111XLOC_038111Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060594-proteinTCONS_00060594-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060594-exon-scaffold_345-1575043694:118039..118309TCONS_00060594-exon-scaffold_345-1575043694:118039..118309Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1575043694:116494..116566TCONS_00060594-exon-scaffold_345-1575043694:116494..116566Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1575043694:112653..115829TCONS_00060594-exon-scaffold_345-1575043694:112653..115829Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1510915933:118039..118309TCONS_00060594-exon-scaffold_345-1510915933:118039..118309Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1510915933:116494..116566TCONS_00060594-exon-scaffold_345-1510915933:116494..116566Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1510915933:112653..115829TCONS_00060594-exon-scaffold_345-1510915933:112653..115829Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1491911889:118039..118309TCONS_00060594-exon-scaffold_345-1491911889:118039..118309Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1491911889:116494..116566TCONS_00060594-exon-scaffold_345-1491911889:116494..116566Clytia hemisphaericaexon
TCONS_00060594-exon-scaffold_345-1491911889:112653..115829TCONS_00060594-exon-scaffold_345-1491911889:112653..115829Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:112653..118309 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.05455 3.61547 0.860036 0.776523 14.3847 10.6634 8.76092 11.1109 4.76746 8.32812 5.94095 4.12866 7.1424 5.8249 8.57011 10.6236 9.52729 9.70566 3.91366 4.48634 7.41328 7.46236 8.09942 9.38683 8.28566 8.59402 4.39747 2.93319 8.14866 4.32861
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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