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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060590 ID=TCONS_00060590|Name=TCONS_00060590|organism=Clytia hemisphaerica|type=transcript|length=692bp
CACTCTGTTCACCGTCAAAATGTACGCTTTGACTTAGCAATTACCGCTAT
TGCTATTCGTCAGGACAAACATACTCGAAACTCGGAAAAAATTCGATACA
TTAGATCAGGCGAAAACAATTGGACGCTAAGTGCAATGGTTGGTGTAAGC
AATGGTTGGTAACGTATCATGAGTAGTAACTGGGATTGTTTGAAGATCTT
GAAAACGAACTAAAATGGATCCATTTCCAATACTGTGGgcctttttcata
aatttttttgagtACAACGGCTACcccattaccaaggtgattaaataCCT
TGAACCTTCAAGTTTTGCTTTTATGGATAGACTCGactgggaatcaatta
ccatagcaatattttgaaaacgaggtaagcattgctcatgacgtaattta
tgaaaaggtttattcGTTCAAAAGCTTTAAAGTTTCTGCTGAAAGctgga
tttttcttttaaataaggAAATGATTATATTTAGGTACTTTAtataaaac
tgaataaaaaaacatacataaatttcgaacaaaaatgttaaaatttcttG
GAGTTCTTTACAGTTTGCagcaaaaaagaatatattagacgatgctatcg
tccgtttagaggTCAGTAAACGCaggaaagagttagggcgtcagtagggc
ggtttacgggaaaaaagtggcggtagagttttggaacaaaNT Run BLAST on NCBI transcript from alignment at scaffold_345:89034..90443- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060590 ID=TCONS_00060590|Name=TCONS_00060590|organism=Clytia hemisphaerica|type=transcript|length=1410bp|location=Sequence derived from alignment at scaffold_345:89034..90443- (Clytia hemisphaerica)
CACTCTGTTCACCGTCAAAATGTAAGTTTCTGTGCTGCAGATAGATTCCG
CTATGGATGGACTAATCGTTTGCAAGATTTTTTCAAGATTTATGTAAATT
CTTTTTGGATCCTATCGAAGTTATTCAAGAAAATTCCACATCTTCTTTTA
GTTATTTTTTTGTGTTTTATTTTCTTCTGAAATTTGCCTATACCTACCTA
AACACTGAGGAACCAATGTTCGAAATATCTAACATCTAATGGTATTTTTG
TCTCGATTCTCCCTCAAATATATACACTGCTCTCCCAGTGTCGCTCGAGT
ATCTTGGTATACGACATGGCTTGGCAGCTCCGTGATTCTTACTCCTTCGT
GGGTAGGACCCATCCCGAATGCATTCGGAGGGCTCATATCTATCTATATA
CACTCAGGAAAACTGTTTCAGTTACTAGTCGATTCTTTATAACTCAAACG
ATCTTTGCCTGGTTCCTTGAAAATGTATTGGAAATAGATTGGAAATTCTT
CAATACCATATACAGTGGAATCTCCATAACTCGAACGCTCAAGGGGGGGG
GACCCAAATCTGTTCGAGTTAAGGAAATTTCGAGTTATTGAGTAAGGTTT
ATAAGGCATTGTCAACTGAAGGGACCTGAAAATTTGTTCGAGTTAAGGAG
ACATTCGAATTAGAGGTTCGAGTTAAAGAGTTTCGAGTTAAAGAGGCTAC
ATTGTAATTCATTCAGATTTGTTTTCTTTTCAAACACAGGTACGCTTTGA
CTTAGCAATTACCGCTATTGCTATTCGTCAGGACAAACATACTCGAAACT
CGGAAAAAATTCGATACATTAGATCAGGCGAAAACAATTGGACGCTAAGT
GCAATGGTTGGTGTAAGCAATGGTTGGTAACGTATCATGAGTAGTAACTG
GGATTGTTTGAAGATCTTGAAAACGAACTAAAATGGATCCATTTCCAATA
CTGTGGGCCTTTTTCATAAATTTTTTTGAGTACAACGGCTACCCCATTAC
CAAGGTGATTAAATACCTTGAACCTTCAAGTTTTGCTTTTATGGATAGAC
TCGACTGGGAATCAATTACCATAGCAATATTTTGAAAACGAGGTAAGCAT
TGCTCATGACGTAATTTATGAAAAGGTTTATTCGTTCAAAAGCTTTAAAG
TTTCTGCTGAAAGCTGGATTTTTCTTTTAAATAAGGAAATGATTATATTT
AGGTACTTTATATAAAACTGAATAAAAAAACATACATAAATTTCGAACAA
AAATGTTAAAATTTCTTGGAGTTCTTTACAGTTTGCAGCAAAAAAGAATA
TATTAGACGATGCTATCGTCCGTTTAGAGGTCAGTAAACGCAGGAAAGAG
TTAGGGCGTCAGTAGGGCGGTTTACGGGAAAAAAGTGGCGGTAGAGTTTT
GGAACAAANT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060590-exon-scaffold_345-1575043694:90423..90443 | TCONS_00060590-exon-scaffold_345-1575043694:90423..90443 | Clytia hemisphaerica | exon |
| TCONS_00060590-exon-scaffold_345-1575043694:89034..89704 | TCONS_00060590-exon-scaffold_345-1575043694:89034..89704 | Clytia hemisphaerica | exon |
| TCONS_00060590-exon-scaffold_345-1510915933:90423..90443 | TCONS_00060590-exon-scaffold_345-1510915933:90423..90443 | Clytia hemisphaerica | exon |
| TCONS_00060590-exon-scaffold_345-1510915933:89034..89704 | TCONS_00060590-exon-scaffold_345-1510915933:89034..89704 | Clytia hemisphaerica | exon |
| TCONS_00060590-exon-scaffold_345-1491911889:90423..90443 | TCONS_00060590-exon-scaffold_345-1491911889:90423..90443 | Clytia hemisphaerica | exon |
| TCONS_00060590-exon-scaffold_345-1491911889:89034..89704 | TCONS_00060590-exon-scaffold_345-1491911889:89034..89704 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_345 | supercontig | scaffold_345:89034..90443 - |
Blast
The following BLAST results are available for this feature:
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