TCONS_00060583 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060583
Unique NameTCONS_00060583
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1990

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060583 ID=TCONS_00060583|Name=TCONS_00060583|organism=Clytia hemisphaerica|type=transcript|length=1990bp
TGAACATAGAGATCTCAAGCAAGCTTTGATTAGCCCTTTAGAAATTCTAG
AGCTTGTGGGAAgataaagaaaaacataaacaaagtgAATAATAGAAGAT
AGAAATGGAAAAGTTAAGTTGCAACCTCCTCGCCACACAATAAAACATGT
ATATAAACTTACAAATACAGTGAGATCTTGCACATTTTTTGGTTCTGTTG
ATACTGCAGGTGATAAAGGATCagacttttctttctttggAGACATAGGA
CCATCCATGACTTATaatcgattaattttttttggcttgGCCTTGCAGTG
AAAAGTCCACAAGCAGACAAATGAGATCCAAAGAAATATGGCGCTTTATC
AGGCTTTATGACTCTTCGCGCTCGATGCGCTATACCCTGTTCGGTTTTTT
TCGATTATTCATAATGGTATTTAGCCAATCAAAAGCAACTAGCGTTGAAA
TGATAAGGCCCCCACGAGACTCCCAAATCATTCCTCTGTTGCACTTGCAA
GCGTACAGCTCAGGTCAGGATTCAGCATTAAAAAGGGAAATTTCTCATAT
TTTGCATTTAATACTCACTTTGCAAAAATGGTTTCACCTCCAGGACCTAA
GGACAACAAACCACCACACAAAGTCGCTGATATTTCCCAAGCTGAACTTG
GACGCCGTTACATTGAGCTTTCTGAAAATGAAATGCCTGGACTTATGGCA
ATGCGAAAGCAACATGGAGCTGACAAACCATTGAAAGGGGCTCGTATTGC
TGGTTGCTTGCACATGACAATCCAAACAGCTGTCCTTATTGAAACCCTGA
CTGACCTTGGAGCTGAAGTACAATGGTCATCATGTAACATCTTCTCCACC
CAGGATCATGCTGCTGCTGCCATTGCTAAAACTGGTGTTCCAGTTTATGC
ATGGAAAGGAGAAACTGATGAAGAATACATGTGGTGTATTGAACAGACCC
TCATCTTCCCTGATGGCAAACCCTTAAACATGATCCTTGATGATGGAGGT
GATTTGACCAACCTTGTCCATGACAAATATCCAGATCTTTTAAAAGACTT
GTTTGGTTGCTGGATATGGTGATGTTGGCAAAGGATGTGCTCAAGCCTTA
CGTGCTTTTGGTGCCCGGGTCATTGTCACTGAAATTGATCCTATCAATGC
ACTTCAATGTGCCATGGAAGGATATGAAGTTTCAACCATTGATGACGCAT
GTGACCGTGTACAAATTATTGTCACTGCAACTGGTTGCTCAGGAATCATC
AAACCAGAACATTTCCAACGTATGAGAGAAGATACCATTGTCTGTAATAT
TGGTCACTTCGATTGTGAAATTGATGCTGCTTGGCTTAATGAAAACTGCA
AAAGAGAGACAATCAAACCACAAGTTGACCGATACACTTTACCAAATGGA
CGTCATGTCATCTTACTTGCTGAAGGACGTCTTGTAAATTTGGGATGTGC
CCATGGACATCCTAGCTTTGTAATGAGCAACTCTTTCACAAATCAAGTTT
TGGCTCAAATCGAATTATGGAAGCATCATGCAAACTACTCCGTTGGAGTT
CATATGTTGCCCAAAAAGctCGATGAAGAAGTTGCCCGTCTTCACTTGGA
GAAATTGCAAGTTAAATTGACTCATTTGACAAGTGATCAAGCTGAATACC
TCAGTCTTCCACAAGAAGGTCCATTCAAACCAGATCACTACcgttattaa
atatttcatacAATGTGTAAATAGGGCTCAATTTCTTGTTTTAAGACGAC
TTATCCTTGAAATGAATTGAGAGATGGCTTATTGAGTTCAAATGAATCCA
GTTTCTGCTTTGGAACTAACCTGCTTTGATTTTTGTCATTAGTTTTTTTG
TCAACCATTTGTCGACACagtttgtaaaaaatttgaatttttattttatc
tcatttattttttttattcttttttatttttcttggaaaatgatttaGTA
CAAAAGGTGAAATCGTcaataaaaaacgaaaacagaAAAT
Run BLAST on NCBI

protein sequence of TCONS_00060583-protein

>TCONS_00060583-protein ID=TCONS_00060583-protein|Name=TCONS_00060583-protein|organism=Clytia hemisphaerica|type=polypeptide|length=178bp
MEGYEVSTIDDACDRVQIIVTATGCSGIIKPEHFQRMREDTIVCNIGHFD
CEIDAAWLNENCKRETIKPQVDRYTLPNGRHVILLAEGRLVNLGCAHGHP
SFVMSNSFTNQVLAQIELWKHHANYSVGVHMLPKKLDEEVARLHLEKLQV
KLTHLTSDQAEYLSLPQEGPFKPDHYRY
Run BLAST on NCBI

transcript from alignment at scaffold_345:200493..207717+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060583 ID=TCONS_00060583|Name=TCONS_00060583|organism=Clytia hemisphaerica|type=transcript|length=7225bp|location=Sequence derived from alignment at scaffold_345:200493..207717+ (Clytia hemisphaerica)
TGAACATAGAGATCTCAAGCAAGCTTTGATTAGCCCTTTAGAAATTCTAG
AGCTTGTGGGAAgataaagaaaaacataaacaaagtgAATAATAGAAGAT
AGAAATGGAAAAGTTAAGTTGCAACCTCCTCGCCACACAATAAAACATGT
ATATAAACTTACAAATACAGTGAGATCTTGCACATTTTTTGGTTCTGTTG
ATACTGCAGGTGATAAAGGATCagacttttctttctttggAGACATAGGA
CCATCCATGACTTATaatcgattaattttttttggcttgGCCTTGCAGTG
AAAAGTCCACAAGCAGACAAATGAGATCCAAAGAAATATGGCGCTTTATC
AGGCTTTATGACTCTTCGCGCTCGATGCGCTATACCCTGTTCGGTTTTTT
TCGATTATTCATAATGGTATTTAGCCAATCAAAAGCAACTAGCGTTGAAA
TGATAAGGCCCCCACGAGACTCCCAAATCATTCCTCTGTTGCACTTGCAA
GCGTACAGCTCAGGTCAGGATTCAGCATTAAAAAGGGAAATTTCTCATAT
TTTGCATTTAATACTCACTTTGCAAAAATGGTTTCACCTCCAGGACCTAA
GGACAACAAACCACCACACAAAGTCGGCAagtatttaatttaattttctc
aGGAACCAGAGAAATCACGCAGTCAGAATCTTAATTGTTTAAATTTTaca
tactcaattttttgaatatCGACTTATCAACATTGACAAATTCAGCCAAT
ATCTATCTTGAAATGTAGAACCTAGTttattgcactcgtgattttctTAA
TTGTGCATTGTGGGCAATACACAATTCCTGCACCTCACAAGAAACGGTCC
TTGCCAAAAGTTTTGTGTGAGCACCCAATGTTTATTTCTCTTTTATGTTC
TTGATATTCTTGATGATATACCATCCTGAAATTAATTTGATCGTATCGGT
GATGGGTTCTAGGACCTTTTAGTACTCAGACagctaaaaaaattttttcc
aaacaaAGGCCGTATCAAAAGGAGCCACTTTCCCCAGCCTCTCCTTGACA
GAAACGTATATAGTAAGACACCCTTCAATTTTGATCAGGAAAGtatcgta
agttggtctaatgtcgacatccctcttctaatttcgacatccttctttat
agataggaataatagaggaaggttggaatcactgatagcaaaaaaaatta
gtttcaatccaTGATGTCGACCTTCCTATCATTattatctataaagaagg
atgtccagattagaagagggatgtcgacattagaccaactttgGTAGAGG
GTGCAATCTTCCAGGCCATTGTCCTCAAAAGTTTGAATACAGGAAAGGTG
CTTTTGGCAAAAACAGCTGGAATCTTAcccaattttaaaatattctgaaa
atctAGGAAATGTATGGCTTACTTGGAAACTGAGGAGTTTTTTGAATAAG
AATAAGGTTGTTCTTGCCTGGTTAGATAATGTCTGACTGTTGATCAGAGT
CCTGGGCTAACCCAGGATTCAGCAATGATATAACTccatttttaacaaat
tttaatttaaaattacCCTTCTTGCTTTAGCTGATATTTCCCAAGCTGAA
CTTGGACGCCGTTACATTGAGCTTTCTGAAAATGAAATGCCTGGACTTAT
GGCAATGCGAAAGCAACATGGAGCTGACAAACCATTGAAAGGGGCTCGTA
TTGCTGGTTGCTTGCACATGACAATCCAAACAGCTGTCCTTATTGAAACC
CTGACTGACCTTGGAGCTGAAGTACAATGGTCATCATGTAACATCTTCTC
CACCCAGGATCATGCTGCTGCTGCCATTGCTAAAACTGGTGTTCCAGTTT
ATGCATGGAAAGGAGAAACTGATGAAGAATACATGTGGTGTATTGAACAG
ACCCTCATCTTCCCTGATGGCAAACCCTTAAACATGATCCTTGATGATGG
AGGTGATTTGACCAACCTTGTCCATGACAAATATCCAGATCTTTTAAAAG
ACATTAAAGGTTTGTCTGAAGAAACCACAACTGGTGTTCACAACCTttac
aaaatgttcaaaagtgGAAAACTCAAATGCCCAGCAATCAATGTTAATGA
CTCTGTTACTAAATCCAAGTTCGACAACTTGTACGGTTGCCGTGAATCTC
TTGTTGATGGTATCAAACGTGCCACTGACGTTATGATTGCTGGAAAGACT
TGTTTGGTTGCTGGATATGGTGATGTTGGCAAAGGATGTGCTCAAGCCTT
ACGTGCTTTTGGTGCCCGGGTCATTGTCACTGAAATTGATCCTATCAATG
CACTTCAATGTGCCATGGAAGGTATGTTGTCTCCTTTTTTCTTACATTAA
TTTTAAATCATAAATTACTCAGCATTGATGATATTCAAGGTTCAGAATTT
GTAGCGACTAATAGTCTGTTGGTACATAATAATGATGCCTTTTTAATTCA
TAAGTTTAAGTCTGAgctgttaaaaaaaattaatatatgTTTCTTAACCT
ACGTGGTTGCTTGCATTATGACAAATATTCCATTTCTTTTCTACAGGATA
TGAAGTTTCAACCATTGATGACGCATGTGACCGTGTACAAATTATTGTCA
CTGCAACTGGTTGCTCAGGAATCATCAAACCAGAACATTTCCAACGTATG
AGAGAAGATACCATTGTCTGTAATATTGGTCACTTCGATTGTGAAATTGA
TGCTGCTTGGCTTAATGAAAACTGCAAAAGAGAGACAATCAAACCACAAG
TGAGTGAATCAAATTAGCGCAATATCTATTTTATCCTATTTCTTCATTGT
CTGTGGATATTGTGTCAAGCATGTCATGTTATCAAGTTGATGATAATTTA
AAATTCTGAGGGTATTAAAAGAATAGAatagattttattaaaaaatttta
taccCATTTCAAACTTAACTTCAGGTTGACCGATACACTTTACCAAATGG
ACGTCATGTCATCTTACTTGCTGAAGGACGTCTTGTAAATTTGGGATGTG
CCCATGGACATCCTAGCTTTGTAATGAGCAACTCTTTCACAAATCAAGTT
TTGGCTCAAATCGAATTATGGAAGCATCATGCAAACTACTCCGTTGGAGT
TCATATGTTGCCCAAAAAGGTAAGAATTTATGCGAAAGTTTTTCAAAGGG
TTTTATGACATTTTTCATAATTCTGAGGTGATTTGTCCAATTTTTAACCC
GTTTGAAAACCATGAAAGTTTATCAGTGATGATTCAGACAAGCATATGTC
TTATATTTGTTACGTGATGATAAATAACAAACTGAGATAAACTAATATAT
TACAAAGTTATTTTGTTAATGTTCANTGCTGGATATGGTGATGTTGGCAA
AGGATGTGCTCAAGCCTTACGTGCTTTTGGTGCCCGGGTCATTGTCACTG
AAATTGATCCTATCAATGCACTTCAATGTGCCATGGAAGGTATGTTGTCT
CCTTTTTTCTTACATTAATTTTAAATCATAAATTACTCAGCATTGATGAT
ATTCAAGGTTCAGAATTTGTAGCGACTAATAGTCTGTTGGTACATAATAA
TGATGCCTTTTTAATTCATAAGTTTAAGTCTGAgctgttaaaaaaaatta
atatatgTTTCTTAACCTACGTGGTTGCTTGCATTATGACAAATATTCCA
TTTCTTTTCTACAGGATATGAAGTTTCAACCATTGATGACGCATGTGACC
GTGTACAAATTATTGTCACTGCAACTGGTTGCTCAGGAATCATCAAACCA
GAACATTTCCAACGTATGAGAGAAGATACCATTGTCTGTAATATTGGTCA
CTTCGATTGTGAAATTGATGCTGCTTGGCTTAATGAAAACTGCAAAAGAG
AGACAATCAAACCACAAGTGAGTGAATCAAATTAGCGCAATATCTATTTT
ATCCTATTTCTTCATTGTCTGTGGATATTGTGTCAAGCATGTCATGTTAT
CAAGTTGATGATAATTTAAAATTCTGAGGGTATTAAAAGAATAGAataga
ttttattaaaaaattttataccCATTTCAAACTTAACTTCAGGTTGACCG
ATACACTTTACCAAATGGACGTCATGTCATCTTACTTGCTGAAGGACGTC
TTGTAAATTTGGGATGTGCCCATGGACATCCTAGCTTTGTAATGAGCAAC
TCTTTCACAAATCAAGTTTTGGCTCAAATCGAATTATGGAAGCATCATGC
AAACTACTCCGTTGGAGTTCATATGTTGCCCAAAAAGGTAAGAATTTATG
CGAAAGTTTTTCAAAGGGTTTTATGACATTTTTCATAATTCTGAGGTGAT
TTGTCCAATTTTTAACCCGTTTGAAAACCATGAAAGTTTATCAGTGATGA
TTCAGACAAGCATATGTCTTATATTTGTTACGTGATGATAAATAACAAAC
TGAGATAAACTAATATATTACAAAGTTATTTTGTTAATGTTCATTGATAT
AAATAATTTTGCCATTGATGATTCAGACAAGCATATGTcttaacaggggg
gggggtcggttcTAAAATTCAAGACATATAATATatcatgagtactaaaa
ggttttttgatgatttttgacatacccccacctaatttttgaaaaaggaa
ttttagtacacatgtaccttaagtggaaaaaaatttgcgattttcgcgta
ttttgtccaagcaaaatttttagaattgcaatttttgccaaaacccctag
gaaaatgaaagaaattaggtaaaaaacaggccaaatcgcgaaatttagtc
cacgcaaaaattttcaattcttttctaTCTAGTTCCATGgttctttacaa
aaacaaagcattcaacttcgaaaacattttttattccataAGCAGAACAT
TAAATACACCCATGTTTCACAGCCCAGGTGGAACATTTTTCTCagttggg
ataaaaattcctattgaaatgctcATCGGGATAGAAattaaattgataaa
aatctattgttccaaagttaaaaaacccagtggggatggttttggagtgc
aatttttaaacttaaaatttcgagtgggatgaaatcaaagtcagtttcat
agtggggctgaaattaaaGCGTGtcttcccaccggggacgaaatttttgc
ttaatttgtgACACGGGTGTTTAAGTCTTATatagaaagtttttattttt
tttcattttgcctaaaatgtTCGGTCGAtagttaaatttcctaaaatttg
gtgtattttAGTACTGatgtactaaaatttttctaaaatttcttgaagac
cccacctaatttgggattttagtacacatggtactaaaatgttttaaggc
ttttttgtaataccaccacgtcactaaaagtcatgatgtctgaaatttta
gtaccgacccccctcCCTGGTCTTAATGTTATTTTGATGACAATCTTATC
GCTGaggtaaaatatattttcattttttgaaaagccaTTGCAAGctcttg
atgatttcgacaAGCATATGTCTTAAGCTACTTATGATGTCAAACTAAAA
TACTGAGGCTTAAAATAGCAAGAGTTAATTCATATTACAAGATTTCATGA
AGTTTTATTTACCCTTGCCTTGCTTATTGAGATATACCAGTGATGATTTT
TACAAGCATATGTCAGAACATAATGATGTCAAATTCTAACTGAGGTTATC
TTAATACTAATAATTATTTGGAAATAGCTGAAATCACTCACTAATGCTAA
ATCTTTCAGGAACATAATGCTACAATACACTAAAAGTCCGTCATAGTTGT
ATCATCTTTTTAATTATACTAATtcctatttcttttttcagctCGATGAA
GAAGTTGCCCGTCTTCACTTGGAGAAATTGCAAGTTAAATTGACTCATTT
GACAAGTGATCAAGCTGAATACCTCAGTCTTCCACAAGAAGGTCCATTCA
AACCAGATCACTACcgttattaaatatttcatacAATGTGTAAATAGGGC
TCAATTTCTTGTTTTAAGACGACTTATCCTTGAAATGAATTGAGAGATGG
CTTATTGAGTTCAAATGAATCCAGTTTCTGCTTTGGAACTAACCTGCTTT
GATTTTTGTCATTAGTTTTTTTGTCAACCATTTGTCGACACagtttgtaa
aaaatttgaatttttattttatctcatttagttttttttaattctttttt
atttttcttggaaaatgatttaGTACAAAAGGTGAAATCGTcaataaaaa
acgaaaacagaAAATTCCTGGTGTAATCTTTGCCCTTGAATCTGGATTTC
TCTGCTTAGAATGTAAATTCATGCTCTTTGCCTTTCTCGATATTTTTCAG
GGCTAATAAAAATacaattgaaaataaatgaaaacattcTTGTGCAATGG
GAAAGAAAGTCGCCGAAGAGGAGGGATGGGATCATGAAAAACTTGCCAAG
GTAATCCTATTCTTCGTAATCTCTCTTGTTTATAGCGAGTTTAAGAAAAA
TATCTCTATTTTCTGGCATAGAGGGCGTTCGAGGCAATGTAATTTATTGA
TTGAGTAATACCCCATCCCCTTGCATTATCAATCCAGCTCAGTTGTGGGT
TCATTTTGATCAGTTAACATGATATATTCGCACTAAAGTATACTCAGGTC
AATAATAAATTACTGCCCTTCCATTATCTTTGTGGTTTTGATCGCATTTG
CAGATAAATCAACATTATTTCGGACgttaaaataaatagaaatttcACTG
AGTAATCTTGTAGTTATTACACATACTGAAGGTTATGTGATGATGCCTTT
ACAAAGTTTATTTGCAAAGCTTAAACTTACTAGTGTTATTTTGACAGCTC
GAATAACaggtttttgtttatttttctgtgaTTATCGACAGTACACTATC
GGCATTATATAAATGTCATTAGATGATTCCTGTCTTTAGTAGATATGTGC
CCTCAAGaagtaagtttgaaaattaataGAACTAATTTCATCCACATTTG
AACAAATTCGAGATTCAGtgtcgactcaaaaaaaagaattgaatttgGGT
TAAAGAAAGTCGTCTTACGTTCCGCAACAATTTCCAAACCAAGTGATAAG
AGAAACTGTTTTCTAATTAAACTACCCACataattattgaatttgaagaa
TCTAGCTCTGCAACAANTGAATTATTATTTTATctcatttagtttttttt
attcttttttatttttcttggaaaatgatttaGTACAAAAGGTGAAATCG
TcaataaaaaacgaaaacagaAAAT

Coding sequence (CDS) from alignment at scaffold_345:200493..207717+

>TCONS_00060583 ID=TCONS_00060583|Name=TCONS_00060583|organism=Clytia hemisphaerica|type=CDS|length=2148bp|location=Sequence derived from alignment at scaffold_345:200493..207717+ (Clytia hemisphaerica)
ATGGAAGGATATGAAGTTTCAACCATTGATGACGCATGTGACCGTGTACA
AATTATTGTCACTGCAACTGGTTGCTCAGGAATCATCAAACCAGAACATT
TCCAACGTATGAGAGAAGATACCATTGTCTGTAATATTGGTCACTTCGAT
TGTGAAATTGATGCTGCTTGGCTTAATGAAAACTGCAAAAGAGAGACAAT
CAAACCACAAGTTGACCGATACACTTTACCAAATGGACGTCATGTCATCT
TACTTGCTGAAGGACGTCTTGTAAATTTGGGATGTGCCCATGGACATCCT
AGCTTTGTAATGAGCAACTCTTTCACAAATCAAGTTTTGGCTCAAATCGA
ATTATGGAAGCATCATGCAAACTACTCCGTTGGAGTTCATATGTTGCCCA
AAAAGctCGATGAAGAAGTTGCCCGTCTTCACTTGGAGAAATTGCAAGTT
AAATTGACTCATTTGACAAGTGATCAAGCTGAATACCTCAGTCTTCCACA
AGAAGGTCCATTCAAACCAGATCACTACcgttattaaATGGAAGGATATG
AAGTTTCAACCATTGATGACGCATGTGACCGTGTACAAATTATTGTCACT
GCAACTGGTTGCTCAGGAATCATCAAACCAGAACATTTCCAACGTATGAG
AGAAGATACCATTGTCTGTAATATTGGTCACTTCGATTGTGAAATTGATG
CTGCTTGGCTTAATGAAAACTGCAAAAGAGAGACAATCAAACCACAAGTT
GACCGATACACTTTACCAAATGGACGTCATGTCATCTTACTTGCTGAAGG
ACGTCTTGTAAATTTGGGATGTGCCCATGGACATCCTAGCTTTGTAATGA
GCAACTCTTTCACAAATCAAGTTTTGGCTCAAATCGAATTATGGAAGCAT
CATGCAAACTACTCCGTTGGAGTTCATATGTTGCCCAAAAAGctCGATGA
AGAAGTTGCCCGTCTTCACTTGGAGAAATTGCAAGTTAAATTGACTCATT
TGACAAGTGATCAAGCTGAATACCTCAGTCTTCCACAAGAAGGTCCATTC
AAACCAGATCACTACcgttattaaATGGAAGGATATGAAGTTTCAACCAT
TGATGACGCATGTGACCGTGTACAAATTATTGTCACTGCAACTGGTTGCT
CAGGAATCATCAAACCAGAACATTTCCAACGTATGAGAGAAGATACCATT
GTCTGTAATATTGGTCACTTCGATTGTGAAATTGATGCTGCTTGGCTTAA
TGAAAACTGCAAAAGAGAGACAATCAAACCACAAGTTGACCGATACACTT
TACCAAATGGACGTCATGTCATCTTACTTGCTGAAGGACGTCTTGTAAAT
TTGGGATGTGCCCATGGACATCCTAGCTTTGTAATGAGCAACTCTTTCAC
AAATCAAGTTTTGGCTCAAATCGAATTATGGAAGCATCATGCAAACTACT
CCGTTGGAGTTCATATGTTGCCCAAAAAGctCGATGAAGAAGTTGCCCGT
CTTCACTTGGAGAAATTGCAAGTTAAATTGACTCATTTGACAAGTGATCA
AGCTGAATACCTCAGTCTTCCACAAGAAGGTCCATTCAAACCAGATCACT
ACcgttattaaATGGAAGGATATGAAGTTTCAACCATTGATGACGCATGT
GACCGTGTACAAATTATTGTCACTGCAACTGGTTGCTCAGGAATCATCAA
ACCAGAACATTTCCAACGTATGAGAGAAGATACCATTGTCTGTAATATTG
GTCACTTCGATTGTGAAATTGATGCTGCTTGGCTTAATGAAAACTGCAAA
AGAGAGACAATCAAACCACAAGTTGACCGATACACTTTACCAAATGGACG
TCATGTCATCTTACTTGCTGAAGGACGTCTTGTAAATTTGGGATGTGCCC
ATGGACATCCTAGCTTTGTAATGAGCAACTCTTTCACAAATCAAGTTTTG
GCTCAAATCGAATTATGGAAGCATCATGCAAACTACTCCGTTGGAGTTCA
TATGTTGCCCAAAAAGctCGATGAAGAAGTTGCCCGTCTTCACTTGGAGA
AATTGCAAGTTAAATTGACTCATTTGACAAGTGATCAAGCTGAATACCTC
AGTCTTCCACAAGAAGGTCCATTCAAACCAGATCACTACcgttattaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038107XLOC_038107Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060583-exon-scaffold_345-1491911889:200493..201118TCONS_00060583-exon-scaffold_345-1491911889:200493..201118Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:200493..201118TCONS_00060583-exon-scaffold_345-1510915933:200493..201118Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:200493..201118TCONS_00060583-exon-scaffold_345-1575043694:200493..201118Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:202073..202494TCONS_00060583-exon-scaffold_345-1491911889:202073..202494Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:202073..202494TCONS_00060583-exon-scaffold_345-1510915933:202073..202494Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:202073..202494TCONS_00060583-exon-scaffold_345-1575043694:202073..202494Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:202692..202813TCONS_00060583-exon-scaffold_345-1491911889:202692..202813Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:202692..202813TCONS_00060583-exon-scaffold_345-1510915933:202692..202813Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:202692..202813TCONS_00060583-exon-scaffold_345-1575043694:202692..202813Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:204157..204359TCONS_00060583-exon-scaffold_345-1491911889:204157..204359Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:204157..204359TCONS_00060583-exon-scaffold_345-1510915933:204157..204359Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:204157..204359TCONS_00060583-exon-scaffold_345-1575043694:204157..204359Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:204535..204729TCONS_00060583-exon-scaffold_345-1491911889:204535..204729Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:204535..204729TCONS_00060583-exon-scaffold_345-1510915933:204535..204729Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:204535..204729TCONS_00060583-exon-scaffold_345-1575043694:204535..204729Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:206284..206622TCONS_00060583-exon-scaffold_345-1491911889:206284..206622Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:206284..206622TCONS_00060583-exon-scaffold_345-1510915933:206284..206622Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:206284..206622TCONS_00060583-exon-scaffold_345-1575043694:206284..206622Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1491911889:207635..207717TCONS_00060583-exon-scaffold_345-1491911889:207635..207717Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1510915933:207635..207717TCONS_00060583-exon-scaffold_345-1510915933:207635..207717Clytia hemisphaericaexon
TCONS_00060583-exon-scaffold_345-1575043694:207635..207717TCONS_00060583-exon-scaffold_345-1575043694:207635..207717Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060583-proteinTCONS_00060583-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:200493..207717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.352975	0.776061	0.430498	0	0	0	0	1.94353	1.01274	2.01271	1.13263	2.28146	3.32876	2.20287	1.43683	0.60505	1.584	1.00953	0.31052	0.334556	0	0	0	0.259703	0	1.5257	0.583121	0.379682	0.408711
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015878Ado_hCys_hydrolase_NAD-bd
IPR000043Adenosylhomocysteinase-like
IPR016040NAD(P)-bd_dom
Blast
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BLAST of TCONS_00060583 vs. Swiss-Prot (Human)
Match: SAHH (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 336.265 bits (861), Expect = 1.255e-107
Identity = 161/226 (71.24%), Postives = 179/226 (79.20%), Query Frame = 3 
Query: 1023 TNIQIF*KTCLVAGYGDVGKGCAQALRAFGARVIVTEIDPINALQCAMEGYEVSTIDDACDRVQIIVTATGCSGIIKPEHFQRMREDTIVCNIGHFDCEIDAAWLNENC-KRETIKPQVDRYTLPNGRHVILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWKHHANYSVGVHMLPKKLDEEVARLHLEKLQVKLTHLTSDQAEYLSLPQEGPFKPDHYRY 1697
            T++ I  K  +VAGYGDVGKGCAQALR FGARVI+TEIDPINALQ AMEGYEV+T+D+AC    I VT TGC  II   HF++M++D IVCNIGHFD EID  WLNEN  ++  IKPQVDRY L NGR +ILLAEGRLVNLGCA GHPSFVMSNSFTNQV+AQIELW H   Y VGVH LPKKLDE VA  HL KL VKLT LT  QA+YL +  +GPFKPDHYRY
Sbjct:  207 TDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432

HSP 2 Score: 231.106 bits (588), Expect = 7.890e-68
Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 2 
Query:  605 NKPPHKVADISQAELGRRYIELSENEMPGLMAMRKQHGADKPLKGARIAGCLHMTIQTAVLIETLTDLGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKGETDEEYMWCIEQTLIFPDGKPLNMILDDGGDLTNLVHDKYPDLLKDLFG 1057
            +K P+KVADI  A  GR+ ++++ENEMPGLM MR+++ A KPLKGARIAGCLHMT++TAVLIETL  LGAEVQWSSCNIFSTQDHAAAAIAK G+PVYAWKGETDEEY+WCIEQTL F DG PLNMILDDGGDLTNL+H KYP LL  + G
Sbjct:    3 DKLPYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDG-PLNMILDDGGDLTNLIHTKYPQLLPGIRG 152
The following BLAST results are available for this feature:
BLAST of TCONS_00060583 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAHH1.255e-10771.24Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]
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