TCONS_00060578 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060578
Unique NameTCONS_00060578
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1894

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060578 ID=TCONS_00060578|Name=TCONS_00060578|organism=Clytia hemisphaerica|type=transcript|length=1894bp
CTTAGACGATGTCAGATGTCAGATGGGTACTGGACACTACCAATTGCAAT
ATCTGCCATGGTCCTTTTGTTTTGAATCTGTAGAAGAAACGGAAACATTT
CAAATGCGCTGGTTTTAATCTTAACGTCAACTTTTGAGAGCGGATCATTT
ATCAAAGTATCGTTGTTGTTGAAAGAAGAACTGAAattatttttagggca
aaaatgTTGACGGTCAATTTATTGGTACTGGCTGGTTTAGCTTTTGTCAA
GACACAAGAAATAAGTTTTGAGAGCTGCAACAAGACATCAGTATGCGTCA
AAGCACCTGGTTGCGAAACGCCACAAAACTGTCCAGCGTTAGCCATGTAC
CATCACAACACAACCACTGACAGACTACATTTCACATTGTTCTTCAAATC
GAAATGGGCAGCTTTTGCACAAAATACGTTTGTTAAGAAGGATAACAGAA
TGGTCAACGCCAAAGGATTTACATGCACCCATCCCATCCCTTTATCAGAA
ACAAAAGTGGAGCCATTGAATCTACGTTTTATGTTGAGCAAAGGATTTGA
TGCACCTGAAATGGTTAAAGCTGACCAGATCTCTGAAGTTTCGGATGTCG
AATTAGCAACAGTCGACGGGGTCCATATGTGCAGCTTCAGCCGGCCAATC
AGCTTGAACTCTATCGAAGGATTCAAATATCTTTACAATCTGGACTTATC
AACAGATTTATTGAACATCATTGTTTTTGGCAACAAAGTTGATGGTACTG
GCTTGGCTTATCACGGACCGGACAATTATTTTGTCGACAAATCAAAACCT
GCTGTTGATTGGAAAACATTTACTGGTGTTGTTGCCGAAGAGATCGAACC
ATCTGCTGAAGTCATGCCAAGTTCATCTCAAATGGCCAGTATCTATGATA
CCAGTagcatgatgatgatgatgtcatcaaaatccataatggcatCCATG
TCTGTGAGTGATAGTGTTGGTATGACAACTGATGCTATGATGTCTGTCAG
TGACAGCGTGATGATGGAAATGTCTAGCATGGTTTCTACTACGCCTGATG
TTGCAATGTCAAGTAAATCAATGGATGCTTCGACAACACCATCAGAAGAA
ACACCGATGGTCAAACCTTCATCTTCATCCACCATCATTGATGTCATCTC
ATCTAAAGCCCCATCCACACCAACAACGACCACACGTCCAACAGTCAAAC
GAACCACAAAATTTAATTTGTCACACGCAACAACATGTACAGCTTCAATC
AGTGTATTGGTGATAGCTATTTCAGCATTGGTGACCATGTTGATGTAAAT
CTATATGTTGGTAAATTCTCTGGATTTACATgaacaattcatgatatgca
ccattgcaacgTCTTTCTAGGAACAGCTGATTAGTTGAAAGTGACGCAtc
gactgattttacgtcatttacaaccaatcagctgtcgggtccatgatgta
atgtcggaagacattgcaatgatgtatatcatgaataccaTGAACAATAA
ATAAAGATGCTTGGATCTATTATGCTGTCAATGGTTGTTGTATTTGTTGA
AATGATCTATCGCTGTTCCAATACTTTTATCGAAAAGGACTTCGGTCGGA
CAGTTGTGTTACAATCTCAGGTTAGCAAGATGAAGGGTGTGTCCCAGTGC
CGTACGAAGCATTTTGATCTTGGCCAGaggagtaaaaatttgaaaaactt
tggcCTCTACATTGCTGGAAAATACATCAAACATCAATGAATGCAagcaa
tttgaatttttttcaatgtttcgAATAGTCGTCTTTaagaaacaatcttt
gaaaattggACCCATATAATAGAGGTGGATTTTAAAAATGTCGttcaatt
ttttgacaactttccaaaaatttcagccgaaattattaaatttt
Run BLAST on NCBI

transcript from alignment at scaffold_345:69212..81970+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060578 ID=TCONS_00060578|Name=TCONS_00060578|organism=Clytia hemisphaerica|type=transcript|length=12759bp|location=Sequence derived from alignment at scaffold_345:69212..81970+ (Clytia hemisphaerica)
CTTAGACGATGTCAGATGTCAGATGGGTACTGGACACTACCAATTGCAAT
ATCTGCCATGGTCCTTTTGTTTTGAATCTGTAGAAGAAACGGAAACATTT
CAAATGCGCTGTAAGCttgatcttttgtttttttttagcttcgcatagcg
aaagtgtCAATGCAGGCAGCCATTTTTCATACAAATCATAGATTGCCAAA
ACAGATTTACATGATTTTGCACCTATAAGGTTGTTTCACCAGAGGTtggt
tttgtaaattttcttagGTAAAGTTCACAGGAAAGAAACTTcaattagac
ataaactcattCATGCTGAAAAATAACCTGGGTATctagactcaaaattt
cagaaaaaaaaactcttatctcaacatacaaagtttctaaaattttagtc
tGGTCATCATTGACCTTTTCATGATGCGTACAAAATCGAACATATAAGGA
AGTTATCATACTGCTATTCATTGTGGTCAACTTTcatatagaaaaaaata
ttacataataattattttattaGCTTGGTCATGCCAGAGCCATTACCACT
TAACAGTGGGCAATCAGACTAGTCATTTACTTGCAGTTATGCAACAAGTT
GAAATTAGctgttttattttaatttgcttgtttacatttttgctGATGAT
ATAAGATTTTCATTGAATCTACACATTTACACATGACATCGGTCTGTCGT
TTTTGAAAGAGTCAGTTAAAACGGGTTACAcgatctttttaatgaaaaca
aactatataagagcataaggcttcgatggtgaaaatgttttaagaacaag
ttaagaacattttaagactttacaAACACCTATtatcttagaaaaaaaga
caaaaatactcacaaagtaatgaaaataaataagaacatgttaagaacgt
tttaaggcttaaaactcaaaaagttaagaacattcgaagggctcaaaaat
tttggatgttcttataaaaaaacgtgtatcgatTGAAAAAATCCACCGAA
AAAATAGGCATTAGAATTAGAgctataattttttatcataatgatgctgg
aaattttgaaatgtaatttaCTCGATATATTGTATAATATATTATGAATT
ACGCCATAATACAAAAATAGTAACATGCTTAGCAGTTAAAAGCTTATTTA
CAATTATAAGTCAATAAAAACCACTATTAACAATCACAAATTGTCagact
aaaaagatatttgCTTGACGAAAAAACNTAAGTCAATAAGAACCACTATT
AACAATCAAAaattgtcagatctaacaagaTATTTGCTTGACGAAAAAAC
TTTGGTAATTAGCTAGCCAATTTCCTATTGCTTTCATAGAAgattaagaa
aataattttcatttacGTATATGTATCTACTGCAACCTGTAACTAATTTC
CTGGTAGTTAATTTTCAGCAACAgtcttttttgtaagaattcCATGCTTT
TATTACTGAAAAGCTCAAGTAAATGTTATTAGAACCAACAAATACAATCG
GTGAAAAATGTTGACAACTtggggtattttaacgtttttcagaatttaaa
ggtcgGACGAGAATTGTGATTTCAGTAACTCtactttttccaattttttc
aataaatttgttactttctttttacttgtatgatatttgggaggggttaa
gtgacTTCCAGGCTGTATTCTCAGccaattccccttttgtgccaaatatt
tctgCGCCGATTGTAGATGTCTCATTGCCGTCCATTTCCATCTACggaac
gttaaatgaacgttaaaACGACGTACGACATTGAAAGCAGTCTCTTTATC
TTTACCAACAATAATGACGTATAGTCGAAGACTAGAGAGGAACCATCAAA
CTTTCCCCcagggtactaggtttgcgaggtgcatgtccgagccaaaaatc
gaaaatcggcCCTTAGAGtgacttttctcaaaatttttgtcgattttcgc
tcgatttttgttcaaattttggaaaattacgaccctttgagagagggTCT
CTCACCTTCGATTCTCGTAAATTTTGGACctttacagagactcaatttgg
tttttaatggttttttaatgtacccctttgagagacgtTCGAGGTTGTGA
AAAAGGgactcgcacatacccggcacccattttgcctaagtgccagGCAA
GTCAAAAGACAAATTGAATCTTGCACCTTCCTCGTATCATttaaagcaaa
gttcagtctaGCCTGTACCACACTATGCAGAATAAAAGATATTTCATTCC
TTAATACCGAGAATTCTGATAACATTCATAGTAGTTACATAACTGTTTTA
GATTAAATGATATATGTTTTGATCATTTTAATTCAGACTTTCACAGTACA
CAGATGATAACTTAAAAGCTCAAACTGATAAAAGCATGTCACAAATTCAT
CGTTTGACAAATTACAATTATTGTTATACAAGTTGAGCTATGTTTTAAAC
ATTACAAATTTGGCTTTGCTTTTACTTGGATGGCCTcattttttatagca
atttCCTTAAATCTAGGTTTTGTGGggttgtttttgatttttaNCTTTTA
CTTGGATGACCTcattttttatagcaatttCCTTAAATCTAGTTTTGTGg
ggttgtttttggtttttgagCTTAAAAATGGGGTTGTTTTGagtttttaa
gcttaaaaatgtatTTATCTTCACCAgtttctgagtatttttgtgcaatt
acttaagaaattggatgtttcagagtccgcaaagcctttatatgttctta
acttgttcttaatattttggccatcgcagccttatgttcttatataattt
gttcttataaaaataataacgtgtaaacagaaaaaaagttaatttcaaaA
GAAGGGAAATGGTTTTTTCATTACTGCCACTTCTTCGAGGAAGTGGTCTA
TTTCCTTTAATATAGCTAAGTCATTATTATTCTAAACTATTGTAATGACA
TGCTATTTGTGGGTTGTAAAAAGACAATAGATTAGTTACAATTAAGCATA
TGCCTACACCTTAACACCTGTGTGAGAGtgcaaaaaaacaatatttttgc
tACAGTCATCTGTATAGTGCTCTCCTCCACAGAGACCTAATTAACTTTCT
TGTAATGACTAATTATATCATAGTTAAGGTTATTTTCAATGTTTATCTTA
TACATAAGTAAAAGGCTTTTCATTTCTAGGGTTTTAATCTTAACGTCAAC
TTTTGAGAGCGGATCATTTATCAAAGTATCGTTGTTGTTGAAAGAAGAAC
TGAAattatttttagggcaaaaatgTTGACGGTCAATTTATTGGTACTGG
CTGGTTTAGCTTTTGTCAAGACACAAGAAATAGTAAGTAGTATTATTATT
CGCTTATtcgttattcgaatctttctataattctatAACTTGTCTGCAGT
CCtcgtcaaggagaaaccttcTTGAAATaaattctataattcgaatctct
ctgttattCAAACAAATTAGActccccgttcgagttcgaatcagcgagag
tcaactgtatatatTTAATTCATATCATTGAATCGAGTCCGAGTCTGAGC
CCTATGTTGCCTGGGGGGGGGGCATGATTTAAAAACGACCGTATGTGTGG
CCTATAACTTcccataaaaaaaaaaaaaaatgttttcataagGGAAGGGG
TGAAAAACAAAGTCTGTGTAAGTAaatctgcgaccgcagtcggaggcccg
aaggctcctctttcgatagctatctacccgaagataGGAGATGcgactct
ttctccctggatttctccacttacccttatTCCTTCTCTTaggggctctg
accatagtgaatttttcataattgccgtgtttaaaatgtgttttctgact
gatgtaaccaacaaaactatggcatgttataaatttcctgttagacaaac
tattcctgaatctgaaaattcaaaaattgcattgaaaaaatttgatgaag
aagaaaatgaagacttttgtgaggaagagtatttcaactttgaagagctt
agtttcggcgaagaaaaaacattttgaaaacattttcgaagtagatggtg
tatcttttaccgaacaataaaaatttttgtggaaaatttttataaatgct
tctttgtctcgaaatcttcaaaatagtggtttttcatcaattttttatct
ggattttccttaaaaagtcataacttttgacatatctttctagaaaaatt
ttccgaaaaatttaaaatagttcaattctttgcggacagtgtatattaaa
actaagcattttttgtaaaagagggtgatgcaacatattattaacatatt
tttaaagttcataacgtcatttttgcaattaaattcttaattacNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naaaggcaattctttgttaaaagtgttaaggaacctgaaatataactttt
atgttcaaataccaaaatcaatttttggactatggtcagagcccttaatt
gctgagcatcaagcagagaggcatcatgtaccattttgagattctggtat
gacccggctaggagttgaacccacaacattacgaaccgtagctggatgct
ctaccgcTGCACTACGGCCGCTTTTACTGATAAGTTATATTTGTTAGTTT
GAATGGTTCCGTAACAATGACTTTTATTAATTTATCAACTTGGCTAGCCC
CAATCTGAAGGTGGAAGCGAGGGTGGCAGCGAGGCACTAGCACCCGATAC
TAACGCAATCGAGTTAGCTTTTAATGCAGACTTCGATACTGTAACGGCTA
ACTATCCTGAAGCAGAAACAGAATTCTGTTATCAAACACGTATTATGCTC
GGTGTTTCATCCGAAGACTTCAGAGACTGTAGCATCCGTGCTGGAAGCAT
CATTGTCTCTTTCACTCTCTACCAATCAGACGCTGATGGAAACAATACGT
TGGATACTCTCAAAGCTAAAGTATTGGCCGGTGAAATGACAATCACTATT
GGTTCAGAAACATACAAGGCTAAACAAAATTCCACGGTTCTTCCCTTTTT
TTACCAGAGTTTTGAGAGCTGCAACAAGACATCAGTATGCGTCAAAGCAC
CTGGTTGCGAAACGCCACAAAACTGTCCAGCGTTAGCCATGTACCATCAC
AACACAACCACTGACAGACTACATTTCACATTGTTCTTCAAATCGAAATG
GGCAGCTTTTGCACAAAATACGTTTGTTAAGAAGGATAACAGAATGGTAt
gtgtatacacgtttttctaataaaaacatccaaaaatattttgtagcCTC
GTTCGTAACGTTTTggattttaaacctaaaaatgttctaaaaacgtttta
ttttcaacgttttgtgaatatttttacccattttcctaagagaacaggtg
tttttgagttcacaaagccttaaaatgttcttaactttgttcttaacatt
ttggccatcgaagcattatgttctgatatagtttgttttttatataaaaa
aacatgtactcgATTGGTTTTTTAAAACTTCTAAGTTAAGTTTCTTAAGG
TGTAAATTCAATGTTCACCAATGACACGTCTAAACAAAGTCCTCCTCGAA
CTTTTTTATAGCCATCTtattagatgttttgtttcttgcaatagtttatc
gttcaacttggagagggaatatTTGTAAACATAGgattttttcttcaact
tttctcaagcaagaaaaaattaaaCCTTCCTTAAAATTTCCGCCACTTTT
GTAACGCTGgattaaaatcagtactttctttattttcatgcGTTATATTT
TTCGAAACCCGGTAGATTTTATTATCAATCCGGTATTTGCAAAAAAACTA
CACGGGTCACGCGTTTTGgttggaaataagtggcttcatttcccacccaa
aaaatTCCACTCTAAAGCCTCTTTGGGGGTTTCAATAGACGATgtttttt
cgtttgttttttttttacctttccggttttttttttgtttttcacatAGT
AACTTTACACAAGGAAGTATACATTTAAAATGGTAGCTCGCTATAGCAAC
GGAAAAATAATAGGCTCGTTAGATTTACGCACTTTTGGTTGATTTCCAGT
AAATGCATTCCATAATTAAAAATTAATGTACAATTAATAGGGTCATTAAA
AATATAGGAGCGCCAATAATAAGGTCGTCCAGGAAATTAAAACCTGGTCT
TTCCGCCATGAAAAATTAATTGCagcaacaaacttttttcataagaactt
tCGATTGTCTATTGTGTAAGCCGCCCGGCTCTTCTTACTTTTGAAGCTCT
GTTTAGCGTCCAGTCATTCCTGAATTCATGTCTAAAcgtatcgaaaaatt
tgaatccaCGGGTTGCATAATTATAGCAAATAGCAGTGCAGTCATTCGAT
TACTCGAAAatgttcacgtgattttattcccatgttacttgctttacaac
ttacagctgataactttattagtgtcaataaattcgaattaatcagaaat
aaatgtcatgtaactaGCACATAAAAaattcgagtaaaagcgtgatttgt
cttcaaactttaatTGTGCAGCCTATGCATTAACATATCCAGGGCGAAAG
AAACGGCTATTCACGCGTCACCCAGAACTCCGGGGAGCCCCAGTAAACAA
AGATATTGACATATCACGTTTTTGCAATCTCAGTTCAAACCTTTGATCTT
GTGTGCCAGTTGGcgtgggatgagctggagtttttataagatgttTTATT
CATTggttatttgaaataatagagatgacgcgttctttagaaaaagcaat
aaaatcctttgtctcaagATTCAACGACCAACCGAATCATagaaaacctt
gtaaaaactccagcctgACCCGTTGGCGTTGGTATCTTCTGTCAAAACTT
TGGTCGAAATAGAGAAATTTTATATCAATAAAAAGGAAATTGAACCTAAC
CTTTTAAccttcttaaaagaaaatcttcaactTTTGCCGGTCCATTATAA
AGTTATTCAAGCTCTTCCTTTTCACTGAAAAGCCGTAAGGATATGAATTA
TTTCCTACTGGATTAATAAAAAATGAACTCTCCTAATTTTCAAAGTAATC
GAGAATCGATATTTCATTAAAGATTTTCGATTGACATTGAAAATGGACTC
GTGGATCCCCTCtcaaaaaagcctcaaaatcctATCTTCTGTCGAACCAA
GCACATGTAGTTGCGCCCTAAAAAAGATGCTAAGGACCCCAAGAGTTTCA
TTTTTTCGGTATAGAAATTTCGCCAGGTCTCAAACAGAACCGTTGATATC
ACAGTGTACGAATATTAAACTGTGAAAAGAAACAACGGCTTTATTCTGCA
CCATCAGCAGAAACAAAAGTGAAGACAAATTACAGAAAAATAAAtacgtg
ttttttttataagcataacgcttataagcatacgaaggctctgatttgca
gaattcctacgcataacataagcataaaTGTCAGcctggaatatttttca
agttgtcattttttatctgtttaaaaaggtttgataGAGGTTAAGTGAAA
AAGACATTCCAAGGCTAGCTACATTCAAATGCTTCCAAAATCTGAATAaa
tctttacaaaatttctgaaatttcactaaaaacttggctcgaggtgaatc
ataagcatgattcataagcatataataagcataagctatggctggatgct
ttaagaacttaagcatacacgagcctgaccaaggggcatacacttgctta
taaaaaaaacatgtatgataCAATCTACTTAAGGTTTACACGAGGATATA
CGCTCTCCATCTCTGCTTTTTTAATGCGATTgagacatgcgcgataaaat
tcttATAGACCGTCGCCACAGGTTAAATTTCATTAACTATTTGATGTTAA
ATTTCAGGTCAACGCCAAAGGATTTACATGCACCCATCCCATCCCTTTAT
CAGAAACAAAAGTGGAGCCATTGAATCTACGTTTTATGTTGAGCAAAGGA
TTTGATGCACCTGAAATGGTTAAAGCTGACCAGGTGAGTTTTTACTTTTC
GGGTTCATGTACCAGGGAGAATCTTGATAAACCTTTTCTTTACAGAAGAT
AcacactttgaaaaaaaatagtaTAATAATTTTCCCTAAAACGTCTTCCC
ATCGCGAGATGTTTGAATTGAACTTTTTTCGTTCAATATCAGAGACAGCC
AAGATCGACAGAACGTGAGCAGCTCAAATCTTTACttggcaaaatattga
aagacTGTATCATGTCAAGGAGGTCCTCATACTCTCCTTCCTGGTGCCAA
GTTTGAAGCATGTTAGAATATTCGTAGATTCTCATGATGCTCAAATTTCA
AATATCTTGATTTGTATATGATTTGTTAATTTATCTTTTCAGATCTCTGA
AGTTTCGGATGTCGAATTAGCAACAGTCGACGGGGTCCATATGTGCAGGT
AATAATATGTCATCGATATGTCATGTATCTTATCATGTCATGTACTAAGA
CTAAATTGGGTTATTCCCAATTTGTGTCTTTCCGGAGGGACCCTGCAACC
CAATTTTAGCTGCAAAATATCGTATACTATTTTCCCTGGGGCTATTTGTT
ACGTtgttgaaaacttaaaatcctGGCACAATTTACGTCCACCCTTTTTA
CGTTTGCCTTAATTATGCCACTGgccaaaaataataacaccgatAAAAGC
CAGCCGATTAAGTATTTCCAATTTATATCTGTATAGCTTCAGCCGGCCAA
TCAGCTTGAACTCTATCGAAGGATTCAAATATCTTTACAATCTGGACTTA
TCAACAGATTTATTGAACATCATTGTTTTTGGCAACAAAGTTGGTAAGTA
TAAAACTTACTTTAATGTCTGGAAAATTTCGCGAGGCAGGCTATTCGCGA
AATTTCGTATTTTtcgggaatttaatttctcaatttgacttaaaaggttt
tatttttacataagtgttcccgtttcatatcaggcacatatttcatatca
ggacagtgtccccctattgttttttttatcataaagCGGACACAGTGAAg
gtatttgttttgatgactgTTAAAGTCCCTCTGCTGTAATGtataaaaac
tttgtaaatGAAAGTTTGCGTCTTTTTGAGCATTTGAGCATTCTTGAAAA
TCGCGAGTTTCTGGCCGCGAAAATATCTGACAttaaagtattttctttat
taTGATACGTCCTCTATTTTAATTCACATGGATAATTTGTTTttgctata
taagaacaaatttttttccatttagtACGGGAAGATGTTCGTGTATTTCC
ATTTTCTCCTAATTATAGCGTACTGTAGTCAATTAGGCCTATCTGCACCA
ATGGGTGCCTGccagaaaaataacaaacaaatttccaaattcggaaTCTC
TTAGTTTTATAGTTTTCCATTTATAAAGTGCTAATAAGTGTCATAAAGTG
TTAGTATTACCCAGATTCAGATTTTATAGAAAACAAGCAGAAAACCCATA
CTACTTACCCTAAGTATCAGAGGCCGAGTTTTCAAAGTAAATATCAACCC
TCTGACGACGAAGTGTTGAAATATTATCATggatgtgtcaatctaatcat
tgTGGAAAGAATCAAAGAAGAAGAGCAATAGTTACTTTTCTTTGCGTTGA
TTGCGCTGAATAGAATCGTGATTGGTTGTCACAGGTCGGAAAATGATTTC
AGCATGTGATTTTAACGGTGCATAATACTATATATTATacggattataaa
cgactccagtctagtatTATTATACCCTTTATTTCATCATTTATAGATGG
TACTGGCTTGGCTTATCACGGACCGGACAATTATTTTGTCGACAAATCAA
AACCTGCTGTTGATTGGAAAACATTTACTGGTAGGTATTCTGTTTTGATT
ATATCATTCGAGAGGCCCCAATAGGAGTCTCTAAGTACGTCATCACGTCG
AAAgagtagaggccactatgtcttcctGAAGCTTTTTCTCTACTACGGCT
ATTCCAAAAAAGGGACGCTTTGTGTAAAATTTCAGAACGTTAGGATCTTT
TCCAGTCAAGGAAAGAGATTTCATTGTACAGTTCATTGTACATATAATCT
AGATTTGGCATGGATCGCTTTTGTATTCGTTGTTGCTTTCCACTGGACAA
GATCGTCATGCTTTCTGATTCACTTCAGAGAAGCACATGTATACCTGCTT
GATGGATAATCTTATCAAGTCTTCTAATTCAAGCTATTTGACATTTGGTT
TTTTATGTAATCTAATCTAAAACTTCAGTTTGGAAAGTCATATAAAATAT
agtttttctctaattcgatgaaATTTTTAGTTCCCTTCTTAAAAATCGAA
ATAGAGAGAGTCTAGCCAGGATGTTATCATTAATAATGTTCTCTGTATAT
TTTCATAGGTGTTGTTGCCGAAGAGATCGAACCATCTGCTGAAGTCATGC
CAAGTTCATCTCAAATGGCCAGTATCTATGATACCAGTagcatgatgatg
atgatgtcatcaaaatccataatggcatCCATGTCTGTGAGTGATAGTGT
TGGTATGACAACTGATGCTATGATGTCTGTCAGTGACAGCGTGATGATGG
AAATGTCTAGCATGGTTTCTACTACGCCTGATGTTGCAATGTCAAGTAAA
TCAATGGTAAGACCTTTCCCAGctggcatacaacgttgtttcaacgttca
tttaacgttacatggacgttgtgaacgttagataaacgttgaaacaatgt
tatgtgccagctgggttcgCTTTTCTATCTTCGACCATATTCGATATCTG
TTATTAAATCTCAGGTGAGTCTTTTTGCAGTGAAAAGGTTCCTctgagaa
gaaattttttgaaaaggaggctaatacagcagaattaggacaaaagaggg
aactgtCAAAGATATaataataagcgggggggggttggaataagaatgtc
ctgtgtggaaaattttcgaaaaattaattttttgtttcgcaACCATAACT
TTTCGCAATTGTAATAAGCTAAAACACACGATAAGTTAGTAGTCTATGTA
TATTGCAATAAAGAGCATACATTGATGAAGTAAAGAACGCCTACTCCCGC
CATAATGGaaacaaacgttcgatttgcgcaAAGGATCGCCTCTATAGATT
CGAATGTTTGCTtacataatggcggaaattacgtaactgGACTAAACATA
AGCTCACGAGATTCCTAATGATTATCTCACTATTCCAGGATGCTTCGACA
ACACCATCAGAAGAAACACCGATGGTCAAACCTTCATCTTCATCCACCAT
CATTGATGTCATCTCATCTAAAGCCCCATCCACACCAACAACGACCACAC
GTCCAACAGTCAAACGAACCACAAAATTTAATTTGTCACACGCAACAACA
TGTACAGGTAACTTAAAGAAGTTTACACCTCGAAGTAAAAGGAAACAGCA
TTACTatacccctgtttcacagacccgctgggatttggcaaaaatttcgt
ccccggcgGAAAACTTTAGAACTTTTCCCCTAATTTCTCTCTCTCCATTT
TGGTTTAAATTTCATCAGAACAGAACTATTCTCAAGTGAATCTGAatcta
ccttaagtggattaattttggcgaatttggtgaattttgttaaaatcccg
ccaaattaaatccccgccaaaatttcaaaaaccgaccattcgccaaatta
aatccccgtcaaatttaacaaaaagaatattatgtaaaaaagaacaactt
ttcagtatattttatagtaatttttacccattttagtgtctcaaaatttc
caattcgccaaattaaatcttcgcaaaattttatgaaattgatcTATCAC
CTAATTAAATACCcgtcaaaaatcgtattttggccgatcgccaaattaaa
tccacgccaaaatttatccacttaaataagttttttttcttctttctatt
TCTGCAGCTTCAATCAGTGTATTGGTGATAGCTATTTCAGCATTGGTGAC
CATGTTGATGTAAATCTATATGTTGGTAAATTCTCTGGATTTACATgaac
aattcatgatatgcaccattgcaacgTCTTTCTAGGAACAGCTGATTAGT
TGAAAGTGACGCAtcgactgattttacgtcatttacaaccaatcagctgt
cgggtccatgatgtaatgtcggaagacattgcaatgatgtatatcatgaa
taccaTGAACAATAAATAAAGATGCTTGGATCTATTATGCTGTCAATGGT
TGTTGTATTTGTTGAAATGATCTATCGCTGTTCCAATACTTTTATCGAAA
AGGACTTCGGTCGGACAGTTGTGTTACAATCTCAGGTTAGCAAGATGAAG
GGTGTGTCCCAGTGCCGTACGAAGCATTTTGATCTTGGCCAGaggagtaa
aaatttgaaaaactttggcCTCTACATTGCTGGAAAATACATCAAACATC
AATGAATGCAagcaatttgaatttttttcaatgtttcgAATAGTCGTCTT
TaagaaacaatctttgaaaattggACCCATATAATAGAGGTGGATTTTAA
AAATGTCGttcaattttttgacaactttccaaaaatttcagccgaaatta
ttaaatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038104XLOC_038104Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060578-exon-scaffold_345-1491911889:69212..69321TCONS_00060578-exon-scaffold_345-1491911889:69212..69321Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:69212..69321TCONS_00060578-exon-scaffold_345-1510915933:69212..69321Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:69212..69321TCONS_00060578-exon-scaffold_345-1575043694:69212..69321Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:72391..72543TCONS_00060578-exon-scaffold_345-1491911889:72391..72543Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:72391..72543TCONS_00060578-exon-scaffold_345-1510915933:72391..72543Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:72391..72543TCONS_00060578-exon-scaffold_345-1575043694:72391..72543Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:74419..74607TCONS_00060578-exon-scaffold_345-1491911889:74419..74607Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:74419..74607TCONS_00060578-exon-scaffold_345-1510915933:74419..74607Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:74419..74607TCONS_00060578-exon-scaffold_345-1575043694:74419..74607Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:77269..77394TCONS_00060578-exon-scaffold_345-1491911889:77269..77394Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:77269..77394TCONS_00060578-exon-scaffold_345-1510915933:77269..77394Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:77269..77394TCONS_00060578-exon-scaffold_345-1575043694:77269..77394Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:77754..77809TCONS_00060578-exon-scaffold_345-1491911889:77754..77809Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:77754..77809TCONS_00060578-exon-scaffold_345-1510915933:77754..77809Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:77754..77809TCONS_00060578-exon-scaffold_345-1575043694:77754..77809Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:78098..78204TCONS_00060578-exon-scaffold_345-1491911889:78098..78204Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:78098..78204TCONS_00060578-exon-scaffold_345-1510915933:78098..78204Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:78098..78204TCONS_00060578-exon-scaffold_345-1575043694:78098..78204Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:79158..79241TCONS_00060578-exon-scaffold_345-1491911889:79158..79241Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:79158..79241TCONS_00060578-exon-scaffold_345-1510915933:79158..79241Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:79158..79241TCONS_00060578-exon-scaffold_345-1575043694:79158..79241Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:79770..80017TCONS_00060578-exon-scaffold_345-1491911889:79770..80017Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:79770..80017TCONS_00060578-exon-scaffold_345-1510915933:79770..80017Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:79770..80017TCONS_00060578-exon-scaffold_345-1575043694:79770..80017Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:80600..80768TCONS_00060578-exon-scaffold_345-1491911889:80600..80768Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:80600..80768TCONS_00060578-exon-scaffold_345-1510915933:80600..80768Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:80600..80768TCONS_00060578-exon-scaffold_345-1575043694:80600..80768Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1491911889:81319..81970TCONS_00060578-exon-scaffold_345-1491911889:81319..81970Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1510915933:81319..81970TCONS_00060578-exon-scaffold_345-1510915933:81319..81970Clytia hemisphaericaexon
TCONS_00060578-exon-scaffold_345-1575043694:81319..81970TCONS_00060578-exon-scaffold_345-1575043694:81319..81970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:69212..81970 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.800092	0	0.619829	9.7801e-09	0.454302	6.58771e-09	2.27441e-09	3.76714e-10	0	2.0711e-08	8.42002e-09	4.65896e-09	3.84879	3.62103	39.5869	28.309	0.296803	0.486017	1.46582	5.4599e-09	2.95713	0.820517	2.11646	3.79955	3.51507e-08	0.911258	1.17791e-09	2.87006e-09	1.78814e-09	1.74293e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060578 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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