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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060566 ID=TCONS_00060566|Name=TCONS_00060566|organism=Clytia hemisphaerica|type=transcript|length=955bp
agaggatatattgtccagggaaAAATTAGACCTTCCGGAGTACCAATTCT
TCCAGAAACTCAATAAACTTAGTTCACCTAGGTCAAAACACAGTAAAATT
GTTCggttactttatttttttatacaGTACACATTGGTAAAAGTTGTTAA
AGCAGCCTACTTGAGCAGAGCTTCCAAAACAGTTTATACATTCAAATTCA
AGTAAAGTAATTTAGATAAACAAATCATTGTAAATATCTAAAGACGTCCG
GTAAAAATTTGAGGTTCATTTTGTTCGGACACCTCGAGTCTTGTAAATAT
ATTTCCGAGTATTTTGTTACTCCAACATCAAAGATTTCTTGTATAaaata
aatgtaaataaaattttatgaaactaatcTTTATGATTTTAGTATTATTG
GATTATTTTTGGTTATGCAttataaaattcacttttgctAGTCGACACAA
AATTAGTCAAAATCTAGATTAGGAAACTTTGCACGGAAAACCGCTGCGAC
GAACGACATTGATTCCAAAAAGCGAAAATTAACAAATAGTTGAAAGTAGT
CGATTAGCAAAATTCTCCTGGATTCATCTAGTTTTAGAAATATAATCATC
ATTTATATTCCACAGAAGTTCAACCTACACGTTCATTTTTTAGGCCCagt
ggaagcggggagactggggagacttcattCTCCCCCACTTTGAGCAAAAG
Agatttcttttacaaaatcctagcgaattttatctcattttgagccttca
gcctccccacttttacggttgttccgccgggcctgtttCTTTGCTTGAAA
CACTTTTCACCAATCTAAGGCTAccatttttaattatttgtcAGAGTTTG
TTAGAGTGATTAAAGTGTTTCAAGTGTCAAAACTTAGAGTAACTTTGATT
ACATTAAGTTAATCAAGCACTTTGTTTTGTCATACTTTTTCGTCCTTTAA
AAGCT Run BLAST on NCBI transcript from alignment at scaffold_344:251934..252888 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060566 ID=TCONS_00060566|Name=TCONS_00060566|organism=Clytia hemisphaerica|type=transcript|length=955bp|location=Sequence derived from alignment at scaffold_344:251934..252888 (Clytia hemisphaerica)
AGCTTTTAAAGGACGAAAAAGTATGACAAAACAAAGTGCTTGATTAACTT
AATGTAATCAAAGTTACTCTAAGTTTTGACACTTGAAACACTTTAATCAC
TCTAACAAACTCTgacaaataattaaaaatggTAGCCTTAGATTGGTGAA
AAGTGTTTCAAGCAAAGaaacaggcccggcggaacaaccgtaaaagtggg
gaggctgaaggctcaaaatgagataaaattcgctaggattttgtaaaaga
aatcTCTTTTGCTCAAAGTGGGGGAGaatgaagtctccccagtctccccg
cttccactGGGCCTAAAAAATGAACGTGTAGGTTGAACTTCTGTGGAATA
TAAATGATGATTATATTTCTAAAACTAGATGAATCCAGGAGAATTTTGCT
AATCGACTACTTTCAACTATTTGTTAATTTTCGCTTTTTGGAATCAATGT
CGTTCGTCGCAGCGGTTTTCCGTGCAAAGTTTCCTAATCTAGATTTTGAC
TAATTTTGTGTCGACTagcaaaagtgaattttataaTGCATAACCAAAAA
TAATCCAATAATACTAAAATCATAAAgattagtttcataaaattttattt
acatttatttTATACAAGAAATCTTTGATGTTGGAGTAACAAAATACTCG
GAAATATATTTACAAGACTCGAGGTGTCCGAACAAAATGAACCTCAAATT
TTTACCGGACGTCTTTAGATATTTACAATGATTTGTTTATCTAAATTACT
TTACTTGAATTTGAATGTATAAACTGTTTTGGAAGCTCTGCTCAAGTAGG
CTGCTTTAACAACTTTTACCAATGTGTACtgtataaaaaaataaagtaac
cGAACAATTTTACTGTGTTTTGACCTAGGTGAACTAAGTTTATTGAGTTT
CTGGAAGAATTGGTACTCCGGAAGGTCTAATTTttccctggacaatatat
cctct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060566-exon-scaffold_344-1491911889:251934..252888 | TCONS_00060566-exon-scaffold_344-1491911889:251934..252888 | Clytia hemisphaerica | exon |
| TCONS_00060566-exon-scaffold_344-1510915933:251934..252888 | TCONS_00060566-exon-scaffold_344-1510915933:251934..252888 | Clytia hemisphaerica | exon |
| TCONS_00060566-exon-scaffold_344-1575043694:251934..252888 | TCONS_00060566-exon-scaffold_344-1575043694:251934..252888 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_344 | supercontig | scaffold_344:251934..252888 . |
Blast
The following BLAST results are available for this feature:
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