TCONS_00060555 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060555
Unique NameTCONS_00060555
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060555 ID=TCONS_00060555|Name=TCONS_00060555|organism=Clytia hemisphaerica|type=transcript|length=2185bp
CTTGGCCGCACCTTCTTGAAATATTCAGTCTGCGACGCAATTAAGTTTTG
TTAAAGGTTATGTGACCACGGATTGAAATAGAAAGTGAAAGTTGAAAAGA
TTATTTTGGTTTGtgattttgctataaaaagtcACAGGAGGAGGTGTGTC
TAAACATTTAATCTCAAAGCAGATCAGCCCATCATTCATGCTTCGAGTAT
CGCAAAGACTAATGGCTCCTGTTAAGAAATTTGATTATCTTGTTGTTGGT
GGAGGAAGTGGGGGAATAGCTAGTGCACGCAGGGCGACAGAATTTTGCAA
AAGTGATGGATCAAAACTCAAAGTTGCAGTCATCGAGGAGAAAAGACTTG
GAGGAACATGTGTCAATGTTGGTTGCGTACCCAAAAAGGTGATGTTCAAC
ACTGCTCTTCATGCTGAAATGCTCCATGATATGAAAGATTATGGCTTTGA
TGTCACATATAATGGCTTTGATTGGAGCCATGTGAAAACAAAGAGAGATG
CCTATGTTAAAAGGTTAAATGGAATGTTTGCAACCAACCTCGATAAAGCT
GAAGTTGAACATATCGATGGACATGCAAAGTTTGATTCAGATGGTGTATG
TCATGTTGGAGACTTACAGTTGCAAGGCGAACATACTATGATTGCTACAG
GTGGAAAACCCCTTGTCCCAAATGTTCCAGGTGCAGAGTACGGAATAACA
AGTGATGGATTCTTTGAACTGGAAAAACTTCCAAAAAAGACTGTGGTTGT
AGGTGCTGGTTATATTGCTGTGGAATTGGCAGCTATTTTACAAACCTTAG
GATCAGAGGTTCATCATTTCATACGAAATGATAAGGTTCTTCGTAATTTT
GATTCTCTGATCAGCGAGTCGATCACTAACGAACATGAAAATAATGTTGG
AGTTAAATTGCACAAATTTGTTGATAGTAAATCAATGAAAATTACGAAAT
GTGACAACACTGGCTTGCTATCTATTGAAACATTAGCCGGTCCAAACAAA
GAGACATTGCAAATTAATGACGCTGAATGTTTATTGTGGGCTGTAGGAAG
AGTTCCAAACACCACTGACCTTGGTTTGGAAGGATTGGGCATCAAAATGA
ATGAAAAGCAAGAAATCGTAGTTGATGAATTCCAAAATACGTCAAAACCA
AACTTCTACGCACTTGGTGATGTCTGTGGGAAGGCTCTACTCACACCAGT
TGCCATAGCAGCAGGCCGTCGCTTATCACACCGTTTGTTCAATAACGAAC
TGGATTCGAAGTTGAACTATGATAATATCCCTACTGTCGTCTTCAGTCAT
CCCACCATCGGAACTATTGGCTTGACCGAACGAGAAGCACGAGAGAAATA
CGGAGAagagaatatcaaaatttatcaaagCAAATTTACCAACATGTTTT
ATACCTTTGCTGAAAACAAACCTCAAACAGTCTTGAAGTTAGTTTGTCAA
TTGCCAACTGAAAAGgTTGTTGGCCTACACTGTATGGGCATGGGATGTGA
CGAAATGCTGCAAGGATTTTCGGTTGCCGTGAAAATGGGGGCTACTAAAA
AAGACTTTGACAATACTGTTGCTATCCATCCAACTTCGAGTGAAGAATTT
GTTACCATGAGATAAAAgatggaaaaaatgaagaaatattgttgaataat
taaaaaaatcaagcatTTAAACAGACTGTTGCATAATCAGTAAATTTATT
TGTGGCATTGTTTAGATGCTgcagtttttaattatttaacaTAACTTGGT
gattaagaaaatcaagttgTCGCTAATGCTTTCAAGATGGCGGCACTCCA
CAGATATCTATCTATATCGATGTTCGTTTTCTAGCACAAAGAGTAGTGAA
AGGGGCTTTATGCAACAAACCTAACCGTTTCGTggaatagatttttttta
aatgtaaatcaGTATGCACTGTTGTTAGAACTTCTAGAAACGTAGATTGT
AGTGGAATTGAGTAATTAAACAAGTGAGGGTCACTTGCtagaattttttt
atactttgaatatatttatttcatattttcagtttagttttattatattt
attttcgtgataaatgtttgattttttttgtcagcGCACAAATTCATATA
AATTTTGTATGTAAAGTCTGTTTATCATTCACTGCAGAGAAAAAAGAGGC
TgagaatttttgataaaattcgaaTCAAATTGGAG
Run BLAST on NCBI

transcript from alignment at scaffold_344:306982..318640-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060555 ID=TCONS_00060555|Name=TCONS_00060555|organism=Clytia hemisphaerica|type=transcript|length=11659bp|location=Sequence derived from alignment at scaffold_344:306982..318640- (Clytia hemisphaerica)
CTTGGCCGCACCTTCTTGAAATATTCAGTCTGCGACGCAATTAAGTTTTG
TTAAAGGTTATGTGACCACGGATTGAAATAGAAAGTGAAAGTTGAAAAGA
TTATTTTGGTTTGTGATTTTGCTATAAAAAGTCACAGGAGGAGGTGTGTC
TAAACATTTAATCTCAAAGCAGATCAGCCCATCATTCATGCTTCGAGTAT
CGCAAAGACTAATGGCTCCTGTTAAGAAATTTGATTATCTTGTTGTTGGT
GGAGGAAGTGGGGGAATAGCTAGTGCACGCAGGGCGACAGAATTTTGCAA
AAGTGATGGATCAAAACTCAAAGTTGCAGTCATCGAGGAGAAAAGACTTG
GAGGAACATGTGTAAGTACTCAAGTTTTTTTAGTCTTTCTTCCTGAATAC
TGTGAATAAGGCTCGATAGACCTTTGCGCTTTTCCATCCGCCATCTTGAA
TTGTATGCAAAAATAGAGGAACGAAAAAGCCGTGGTTGGATTTAGTTGGA
CAGTGTAGACCTAAGGGGTCAGTCACAAATCGATTCTAGGTTAGAAGAAC
GTCAATTGACGTTTTAAAAGCTGACCCACCCACCCACACCCAAAAACGTC
AAACACCTTNGGTTTTCAAAACAAACGAGCGATCAAACAGAAACATGGCG
AGAAGTAATATTTGGCATGGAATGAAAAATCGATGTTTCTGAAGAACGTC
AACAACCTTTAACCCACCCACCCATATACGTNACCTTTGCGCTTTTCCAT
CCGCCATCTTGAATTGTATGCAAAAATAGAGGAACGAAAAAGCCGTGGTT
GGATTTAGTTGGACAGTGTCAGTGTAGACCTAAAGCTCTAAAACAGCATC
TAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAAACTATA
AAGTGCANAACAACTAAACTTGTTCATTCTTTTTTTTTAAATACTCAGAA
TTTATCAGAGAAAACAAAGAAAAAAACCCCATCCCATTACCTATCTTCAA
TAAAAAGATATACCATTTATTAGACATCAAGGTGAAAAAATGGCGACTCG
GAATTCGTGGCACCACCGTCTACCTTGACCACCATTTTTCAAATNNNATC
TAACAAAATTAATAACTGCACTGTCATCATTGACAATAAAACAAACGATT
TTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTTCATCGAAATGATCT
ATCATAGCCTACCATAGCATAGTCTACCATTTTTAGCGCGGTCCGAGGAT
TGAGCCGAGAACGCTCCGAGAGCTCCCGCGCGGGTGAAAAACTTCAATCT
GTCAATCATTTTCTCAAGCGAAGAGTACGCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTTTCCATAAATTATACATGCGCATCGAAAATATCTAAAT
GCGCGCAAAAGTACTGCTAAGTAATACGCCAAAAGCTGGCCAATCAGGCC
GAATCTGCATTGCAGGGAAAAATCTCCCTGCAGGCGAGTTACCTTGGATT
GGATTCCCAGGCTATCCTTACCCAAGCCACGCCACTATTAGGCAAAAGTC
TTAAAACCTTTTACAAAATTCCGCCGCCCGGCCCTGGCAGCCCCTTTTTG
AGCAGGGAGTGCTGTTGTATATCCATAAAAAGGGTGTGGGCNGCCCGGCC
CTGGCAGCCCCTTTTTGAGCAGGGAGTGCTGTTGTATATCCATAAAAAGG
GTGTGGGCGAGGTTCATTAAACCACAATGATATTAGAGTAAACTAATTTC
TTTGAATGATGGTAGGATTGTAGAAGACCCAACGTTTTCTTTGTCGGAAT
TCTTTTTTTTCATTTATTTTTTATTTTCCTATCTTCTCTTTTAGGTCAAT
GTTGGTTGCGTACCCAAAAAGGTAAAACTGGTTACAATTTAATAAAGAGT
GCAATTACACCTAGATAAATGAGGTTTAACCTTTCCGACCCGAAAGAGGT
ATCTCTTACGTCCTGCATGCATAGGTCCTGATATACCTTATGTCTGGCTT
CATATTTCTGTTCAAATCTAATTTGTGTACTCAGTTAAACATATTTAAGA
AGGAAAAAGGTAAGGGTTTTCCAAAAATGTATGGGCTTTCCAAAAATGTA
TGGGTTTTTTTCCTGAAGCTTAATTAAAAAAAAATTAAGACCAATATCGT
GAAATTAGCATTTTCTGCAAAAANGGGCTTTCCAAAAATGTATGGGTTTT
TTTCCTGAAGCTTAATTAAAAAAAAATTAAGACCAATATCGTGAAATTAG
CATTTTCTGCAAAAAACCTTGCGTGCTGGAAAGGTTAAATAATTTCAAAA
AGTTCATAAATCTTTTTTCATTTTCACCAATCAATGATATCATTTTTGCT
CTCAAGCTAACTTTGTTATTAGTAATTAGGGTTACTTTCATGAGTGAGAG
GTAACTTTCATCATTTACATACCACAACATTTTCTGGTCTTCAATGTAAA
TTCAAAAGTCATGATTTGACTGATTTAAATTCTAGCTAAATTAACAAAAT
TGCAGACCAAAACATTCAGCTGTTTGGAAGTTATGAAAGTTACCCCCAGG
CTTATGAAAGTAAGCCTGTTGACGATACAAGTCTCTGCGTACAAAAGAAT
TGATTTTCCTCTTATTACGAAAATTAGTTCTTACCTAGTATCAAACACAG
TCTGACATCTTTATTTGCGATGTTAGCTTTTTTAGGCTTATGCAAATAAA
TGGATAGAAATAGAAATGACAGTCACCAAAAACAGGAAGATTTTTCTGAT
TGTGGAAGAAACCTCTTATTAATGGACAGCAAAAAGGTGAAAGATCTTCT
TTTTGACTCATTTCATGCAATGTAAAAATAAACATTAATTTTCAGGTGAT
GTTCAACACTGCTCTTCATGCTGAAATGCTCCATGATATGAAAGATTATG
GCTTTGATGTCACATATAATGGCTTTGATTGGAGGTATAACATTGTAAAA
AATTTATATCTACAGTAAAGATATAATCTAAATATCTCCTAAATTTCAGT
ATTGTTAATTCGAAGAAAGATACAGAGTGCTCCATTGCCTTTTATTTCAG
GTATTCCATTTTTTATCATTTGAATTTGCGTTGGAGTTGCGTTAGTTCAT
TGGTTAATTGTAATACGTAATACTGCAACAGATGAGGCAGGTGTTTTCAT
TTAATCTGAGTTCGCGAAACAGACAAAACGTCTTCAAAAAAGCTTCTGTT
GAATGCAATGATTAATCTACTTTTTAGCCATGTGAAAACAAAGAGAGATG
CCTATGTTAAAAGGTTAAATGGAATGTTTGCAACCAACCTCGATAAAGTA
AGATATCAAATCTATCATGGTTTGAATTTTTACTTTAGTATCTAACCATC
TACGCCAGATAGCCAATTCTGGAAAATGTCAAAATGATTGGAGATAGAAC
CTCTTTTAAATATTTGCTGGAAGGGGCTATCCAAATGGTCAATGGGTTAT
GGCGCTTCTAGACCCTTATTTACTTGTTGGATACCACAATCATCCATTAA
GAGCCTTGGTGTAACTTACACTTTCATTAAATTTCCTTCTCTAGAATGTC
CTTTTCAAAAAAGGATTTTCTAGTTTTCACTACTCTCAAATTACAAAAAT
ATAAATCAAACAAAACAGCTTCGTTAAAGCATTACTTAATAATGGTTGGG
CATAGATTTTTCTGAAACCTGGTTTCAAATACGTTACTTTCAAACATGTC
CTTTTTTTACAGGCTGAAGTTGAACATATCGATGGACATGCAAAGTTTGA
TTCAGATGGTGTATGTCATGTTGGAGACTTACAGTTGCAAGGCGAACATA
CTATGATTGCTACAGGTGGAAAACCCCTTGTCCCAAATGTTCCAGGTAAA
AATTATTCTGTCCAACTCCCCACATCACATATACAGAGGTTTGTATATTC
TGTATGCGTTTTCTTTTTATTTCAAGTCAAACTTTAGCTCTTAAAAATTT
GAAAATTTGTATTTGAACATAATTAAATAGATCAATAATAAGCATTTTCA
ATGCACAATAGAAATATTGTTTGAAAGAACCGGTTACAACAAAATCAAAA
TTAAACGTCGCTTTGCATTTCGTAGTCCAAAAGCAATAGCATTTTGTAGT
CCTAAGAACTATTTTTTACCTCTTGCAGACAAGGCATTTTAAATTCTACT
AAGATATATGATATAATTCTCTTTTTTCATTGTCTTTCAATGGTATTTAC
TATTATTTCTGTTTTGTATTCCAAAAAGGTAGTAGTATTTTTAATACTCT
AATACCATATCATATATCATTGTTGCAATTCATTTTGGTTTTAGGTGCAG
AGTACGGAATAACAAGTGATGGATTCTTTGAACTGGAAAAACTTCCAAAG
TAAGTATTTTCTCAAAGGTAAATTTTTAAGACTTTCATTGAATCTTTTTT
CGACTCAGCGATATTCATATTGGAATTACAAAGCTCCTTTTAATTTTTGG
AATTTTACTTCAAAATTTACTGTGTCGACTGTGTTTGACTGTGTCTTTTT
AATCAATTTTCGATATAAAATTTGTAATGTTTTCTCTTTGCAGAAAGACT
GTGGTTGTAGGTGCTGGTTATATTGCTGTGGAATTGGCAGCTATTTTACA
AACCTTAGGATCAGAGGTTCATCATTTCATACGAAATGATAAGGTATATA
NGGTGCTGGTTATATTGCTGTGGAATTGGCAGCTATTTTACAAACCTTAG
GATCAGAGGTTCATCATTTCATACGAAATGATAAGGTATATATATAGAGA
AATGTTATCTTTGAATTTTGATTTTGCTGACGTTGTTTATTCTTCTTTAG
ATTCTTCTTAACAGCTTATAAAAAGTCTTTCCATGGTTATGTTCGAGAGA
GAATTTTGATTACTAATGATGATGACATCCATCCTATTTCAACAAACGAT
TCTATTGCATTATATTCTTTTTTAAGGTTCTTCGTAATTTTGATTCTCTG
ATCAGCGAGTCGATCACTAACGAACATGAAAATAATGTTGGAGTTAAATT
GCACAAATTTGTTGATGTAAGCGAAGACTTTATTTTACAATCTGGATTTT
TCTCATCTAAATTTAAAACTTTGGAAAGTTCGATTCTGGATTTAATATTG
TTAGGTTTCAGGCGAAAACATTTTGGCCCAATGGAATTCTCTCATCCTCA
GCTTTATTTTTTTTATTATATAATAAAAAACATTTTTCAGAACGTTTTTA
TAGTATTTATACTCTTGATTTAATGAACAAACTAAATATCGTATGAAAAT
CTTGGAATATTGACAATGTATTAATCCGTTTATAAACTTGAAAAGTGACG
ATACTGTTTCAAATAAAAAAAGCTCAATTTCTGAACTTTCTTCTCGTATT
TTAGAGTAAATCAATGAAAATTACGAAATGTGACAACACTGGCTTGCTAT
CTATTGAAACATTAGCCGGTCCAAACAAAGAGACATTGCAAATTAATGAC
GCTGAATGTTTATTGTGGGCTGTAGGAAGAGTTCCAAACACCACTGACCT
TGGTTTGGAAGGATTGGTAAGTATAGATTGTTCGTTTAAATTTTAACGTT
AAAAATACCCTACTAGCATCTGAAGTCTTTATGAAGTTTTGTGTTGCAGG
TTCAAATCAAGTCTGTATTGTATACTATTCAGCTTCTTATTATTTATCAT
AATTTTTCACACACTAGTTTTTATTTCCATCTCTAGGGCATCAAAATGAA
TGAAAAGCAAGAAATCGTAGTTGATGAAGTAATTAGCTTTTCTTTTTTTA
CCGATTCTTGTATACTTTCAAAGATTTTATTTAGCTGCCTTTCGCATGAT
TTGCTGAGCAATCCAAAAAACTCACTCACTATTATGACTACTAGGTACAA
TACACGAACAGCAAAATTTTCGAGCTCCATCTTTACCGTGATTCCAACAT
TTGATTGAAAAATTTAAAGTGAAAAAATATATTTATTGACATTTGTAATT
TGTTTCAGTTCCAAAATACGTCAAAACCAAACTTCTACGCACTTGGTGAT
GTCTGTGGGAAGGCTCTACTCACACCAGGTAACTTCATTTGATTAGCATG
TCTAGTTGAAGATTTAACTTTGAATTATTCAAAGATGTCTTTTAACATTT
ACTGAATATCTTCAAATGAAAATAGGATTCCGAAAAATAGGAAAAACAAG
TTATTAAAATCACTCGGACATTATCCAATATTGTATTTCAGGTAATTTCA
TTTGACTACTAGCATGTCTGGCTGAAGGTTTAACTGTAAATTAAGTATAC
TTTAAGCTCTAAAAAGTTTGCTGAATATCTTCAAATGAAAATAGGAATGA
TCAGAAAAATAGGGGGAAAACGTTATTAAATTCGCTCGGGCATTGTCCAA
TATTGTATTTCTTTATCCCTTTCAGTTGCCATAGCAGCAGGCCGTCGCTT
ATCACACCGTTTGTTCAATAACGAACTGGATTCGAAGTTGAACTATGATA
ATATCCCTACTGTCGTCTTCAGTCATCCCACCATCGGAACTATTGGCTTG
ACCGAACGTAAGTAAATATCTTAGCGTGTATGATAGTATTACCATCACCA
ACCTAGTCCGAAGTCCACTTAAAGCATTTTTATTGAATGAATTGCGCGAT
CGAGTGGCCCGGTTAGTTCCCAGTTTTTTTAGCTCTTGCTTAGGTGGAAA
TACTAGAAATTGGTAGGCTGGCGAATGAAAAATTAACTCCTAGGCAAGCT
ATGCACTTGAGGCGACGAACCGAATTTTTCGAACAACGAATTGTAATTTT
TTTCGTGTCTGAGATGGGCGAAATTCCGAAATTCGCCGCTCGCCGGGCCT
AAATAAGACCCCTGTAAATAATTTTTTACCGAATGTCAAAAACTAGCTTG
CAACCTTTTATTATTTGGGATCGAGAATTAATCATTCCATACAATTAAAC
CTTGCTGAAGACTCCTTTTCTTATCTATTTACGTAATTCTTCATTTTAGG
AGAAGCACGAGAGAAATACGGAGAAGAGAATATCAAAATTTATCAAAGCA
AATTTACCAACATGTTTTATACCTTTGCTGAAAACAAACCTCAAACAGTC
TTGAAGTTAGTTTGTCAATTGCCAACTGAAAAGGTACGGTGTGAAGGGTT
TTTAAGTCCTCACGTCTATTACACTGTCTGCGCCATAAATACATTTGTTC
CATCCCAAGATACAATCAGTGCCATAATATATTGGCACTTTTGGCTAATT
TACCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTTTTAGGCC
TTCAACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GAAAATAGGATTCCGAAAAATAGGAAAAACAAGTTATTAAAATCACTCGG
ACATTATCCAATATTGTATTTCAGGTAATTTCATTTGACTACTAGCATGT
CTGGCTGAAGGTTTAACTGTAAATTAAGTATACTTTAAGCTCTAAAAAGT
TTGCTGAATATCTTCAAATGAAAATAGGAATGATCAGAAAAATAGGGGGA
AAACGTTATTAAATTCGCTCGGGCATTGTCCAATATTGTATTTCTTTATC
CCTTTCAGTTGCCATAGCAGCAGGCCGTCGCTTATCACACCGTTTGTTCA
ATAACGAACTGGATTCGAAGTTGAACTATGATAATATCCCTACTGTCGTC
TTCAGTCATCCCACCATCGGAACTATTGGCTTGACCGAACGTAAGTAAAT
ATCTTAGCGTGTATGATAGTATTACCATCANTGGGAGGGATTTATTGGTT
TCTAGGCTATATTTCAAGCCCTACTAGACCGTTTTTGAACTTTTGGATCC
TCAGATCCCAAGCTCCTAAGCCATAAGTCTAGCGTTAAAACTCAGAGTTA
AAACTCTACCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGT
TTCAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNACTCTACCCTTCGAACCTACTTTAGAGCACTTACAAA
TCGATTGTGGTTTCAAAACACCCCGGTGAATTTCCCTTTTGTGCAAAGTA
TTTTGTCACTGATTGTGGGTTGGTAGGTTCTAAGTTATTAGAAGGTTCTG
AAAAACACACATTTTGAGGTGCAGACAGTGTTCTAGACGTCTGGCTTTTT
GAATCCGAGCCCCGCAAAGTTCAATCCTTAGAATCCGAAATTTGTGTTAT
ATGTCATGAGATTTCTACTTTCCACGTTTATTTTTCTTTATCAAATTTAA
AATAAACTTTTCTTAAGATGCATTAGCGGGACCAGGTTTCGACGCTTTGA
TAACGGATTTTTGGAAAAACATAATTAAGTACATTAAAGCCGGTTTAGGT
AATATTTTACTCTATTTGAAAAACGAGGTAATAATTTTTATTGATAAGTG
GGAATCAAACCTTGGCGTTTATCACCCGTATAGGATCAGGAATCAAGATT
GTAGACTACTACGGCGCCCTAGTTATTCGAATGTGGCATCCGTATTCAAA
GCATAAGAATGTGATTTTTGTATTTCAAAATTTTCTTAGGTTGTTGGCCT
ACACTGTATGGGCATGGGATGTGACGAAATGCTGCAAGGATTTTCGGTTG
CCGTGAAAATGGGGGCTACTAAAAAAGACTTTGACAATACTGTTGCTATC
CATCCAACTTCGAGTGAAGAATTTGTTACCATGAGATAAAAGATGGAAAA
AATGAAGAAATATTGTTGAATAATTAAAAAAATCAAGCATTTAAACAGAC
TGTTGCATAATCAGTAAATTTATTTGTGGCATTGTTTAGATGCTGCAGTT
TTTAATTATTTAACATAACTTGGTGATTAAGAAAATCAAGTTGTCGCTAA
TGCTTTCAAGATGGCGGCACTCCACAGATATCTATCTATATCGATGTTCG
TTTTCTAGCACAAAGAGTAGTGAAAGGGGCTTTATGCAACAAACCTAACC
GTTTCGTGGAATAGATTTTTTTTAAATGTAAATCAGTATGCACTGTTGTT
AGAACTTCTAGAAACGTAGATTGTAGTGGAATTGAGTAATTAAACAAGTG
AGGGTCACTTGCTAGAATTTTTTTATACTTTGAATATATTTATTTCATAT
TTTCAGTTTAGTTTTATTATATTTATTTTCGTGATAAATGTTTGATTTTT
TTTGTCAGCGCACAAATTCATATAAATTTTGTATGTAAAGTCTGTTTATC
ATTCACTGCAGAGAAAAAAGAGGCTGAGAATTTTTGATAAAATTCGAATC
AAATTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038088XLOC_038088Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060555-exon-scaffold_344-1575043694:318280..318640TCONS_00060555-exon-scaffold_344-1575043694:318280..318640Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:315370..315396TCONS_00060555-exon-scaffold_344-1575043694:315370..315396Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:314307..314395TCONS_00060555-exon-scaffold_344-1575043694:314307..314395Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:313944..314013TCONS_00060555-exon-scaffold_344-1575043694:313944..314013Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:313396..313528TCONS_00060555-exon-scaffold_344-1575043694:313396..313528Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:312892..312946TCONS_00060555-exon-scaffold_344-1575043694:312892..312946Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:312598..312697TCONS_00060555-exon-scaffold_344-1575043694:312598..312697Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:312225..312314TCONS_00060555-exon-scaffold_344-1575043694:312225..312314Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:311725..311886TCONS_00060555-exon-scaffold_344-1575043694:311725..311886Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:311513..311554TCONS_00060555-exon-scaffold_344-1575043694:311513..311554Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:311213..311282TCONS_00060555-exon-scaffold_344-1575043694:311213..311282Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:310734..310865TCONS_00060555-exon-scaffold_344-1575043694:310734..310865Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:310158..310291TCONS_00060555-exon-scaffold_344-1575043694:310158..310291Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1575043694:306982..307701TCONS_00060555-exon-scaffold_344-1575043694:306982..307701Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:318280..318640TCONS_00060555-exon-scaffold_344-1510915933:318280..318640Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:315370..315396TCONS_00060555-exon-scaffold_344-1510915933:315370..315396Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:314307..314395TCONS_00060555-exon-scaffold_344-1510915933:314307..314395Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:313944..314013TCONS_00060555-exon-scaffold_344-1510915933:313944..314013Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:313396..313528TCONS_00060555-exon-scaffold_344-1510915933:313396..313528Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:312892..312946TCONS_00060555-exon-scaffold_344-1510915933:312892..312946Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:312598..312697TCONS_00060555-exon-scaffold_344-1510915933:312598..312697Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:312225..312314TCONS_00060555-exon-scaffold_344-1510915933:312225..312314Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:311725..311886TCONS_00060555-exon-scaffold_344-1510915933:311725..311886Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:311513..311554TCONS_00060555-exon-scaffold_344-1510915933:311513..311554Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:311213..311282TCONS_00060555-exon-scaffold_344-1510915933:311213..311282Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:310734..310865TCONS_00060555-exon-scaffold_344-1510915933:310734..310865Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:310158..310291TCONS_00060555-exon-scaffold_344-1510915933:310158..310291Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1510915933:306982..307701TCONS_00060555-exon-scaffold_344-1510915933:306982..307701Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:318280..318640TCONS_00060555-exon-scaffold_344-1491911889:318280..318640Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:315370..315396TCONS_00060555-exon-scaffold_344-1491911889:315370..315396Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:314307..314395TCONS_00060555-exon-scaffold_344-1491911889:314307..314395Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:313944..314013TCONS_00060555-exon-scaffold_344-1491911889:313944..314013Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:313396..313528TCONS_00060555-exon-scaffold_344-1491911889:313396..313528Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:312892..312946TCONS_00060555-exon-scaffold_344-1491911889:312892..312946Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:312598..312697TCONS_00060555-exon-scaffold_344-1491911889:312598..312697Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:312225..312314TCONS_00060555-exon-scaffold_344-1491911889:312225..312314Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:311725..311886TCONS_00060555-exon-scaffold_344-1491911889:311725..311886Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:311513..311554TCONS_00060555-exon-scaffold_344-1491911889:311513..311554Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:311213..311282TCONS_00060555-exon-scaffold_344-1491911889:311213..311282Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:310734..310865TCONS_00060555-exon-scaffold_344-1491911889:310734..310865Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:310158..310291TCONS_00060555-exon-scaffold_344-1491911889:310158..310291Clytia hemisphaericaexon
TCONS_00060555-exon-scaffold_344-1491911889:306982..307701TCONS_00060555-exon-scaffold_344-1491911889:306982..307701Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_344supercontigscaffold_344:306982..318640 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.60767	1.95343	7.26318	2.07456	0.317485	0.160278	0.312372	15.5556	7.98316	0.345985	0.278129	0.119946	0.130198	0.0571331	0.102881	0.103257	0.249253	0.249243	0.220086	0.213319	0.257589	0.345878	0.380485	0.333705	5.78284	0.628731	0.637037	0.756799	0.491156	0.576061
Blast
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BLAST of TCONS_00060555 vs. Swiss-Prot (Human)
Match: GSHR (Glutathione reductase, mitochondrial OS=Homo sapiens GN=GSR PE=1 SV=2)

HSP 1 Score: 504.982 bits (1299), Expect = 6.924e-171
Identity = 272/469 (58.00%), Postives = 334/469 (71.22%), Query Frame = 2 
Query:  221 VKKFDYLVVXXXXXXXXXXXXXTEFCKSDGSKLKVAVIEEKRLGGTCVNVGCVPKKVMFNTALHAEMLHDMKDYGFDVTYNGFDWSHVKTKRDAYVKRLNGMFATNLDKAEVEHIDGHAKFDSDG--VCHVGDLQLQGEHTMIATGGKPLVPN---VPGAEYGITSDGFFELEKLPKKTVVVGAGYIAVELAAILQTLGSEVHHFIRNDKVLRNFDSLISESITNEHENNVGVKLHKFVDSKSMKITKCDNTGLLSIETLAGPNKETLQ--INDAECLLWAVGRVPNTTDLGLEGLGIKMNEKQEIVVDEFQNTSKPNFYALGDVCGKALLTPVAIAAGRRLSHRLFNNELDSKLNYDNIPTVVFSHPTIGTIGLTEREAREKYGEENIKIYQSKFTNMFYTFAENKPQTVLKLVCQLPTEKVVGLHCMGMGCDEMLQGFSVAVKMGATKKDFDNTVAIHPTSSEEFVT 1606
            V  +DYLV+GGGSGG+ASARRA E         + AV+E  +LGGTCVNVGCVPKKVM+NTA+H+E +HD  DYGF      F+W  +K KRDAYV RLN ++  NL K+ +E I GHA F SD      V   +    H +IATGG P  P+   +PGA  GITSDGFF+LE+LP ++V+VGAGYIAVE+A IL  LGS+    IR+DKVLR+FDS+IS + T E EN  GV++ KF   K +K T    +GL      A P +  +   I D +CLLWA+GRVPNT DL L  LGI+ ++K  I+VDEFQNT+    YA+GDVCGKALLTPVAIAAGR+L+HRLF  + DSKL+Y+NIPTVVFSHP IGT+GLTE EA  KYG EN+K Y + FT M++   + K + V+K+VC    EKVVG+H  G+GCDEMLQGF+VAVKMGATK DFDNTVAIHPTSSEE VT
Sbjct:   62 VASYDYLVIGGGSGGLASARRAAEL------GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELEN-AGVEVLKFSQVKEVKKTL---SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 520
The following BLAST results are available for this feature:
BLAST of TCONS_00060555 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSHR6.924e-17158.00Glutathione reductase, mitochondrial OS=Homo sapie... [more]
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