TCONS_00060537 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060537
Unique NameTCONS_00060537
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1574

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060537 ID=TCONS_00060537|Name=TCONS_00060537|organism=Clytia hemisphaerica|type=transcript|length=1574bp
GAAGGAACATGGAGTCAACTTGGTGCATGCCAACCGAGAGGACGATGCCA
GTGGAATATGTATAGATGTAACAAAACAAGTCATGGTGGTGTTTATTGTT
ATTGTACACACACAGCAGgcccatctacaccAGGGAAAGCAGTTTCTGAT
GACATCGATCGATGGAATGTTACAATCATTGGAATTACATCAGCTCTGGT
TTTCTTGATCATTATCGTTTGTGTTGGAATCATTGCATTGTTCTGCACCA
AATATCGATCACGCAAACGACAAGACTCGCAAAATACTGCAGAATCCAGC
ATTTACGCTGACATTAACGAGCTGCAATTAAACTTGAAGTACAACAACCA
ACGCTCATATTCGGCCAACAGTACTCACACCATCGGCTCCACATGTAGTG
GTTCCGCATTAAACAATGCTTATGAACCTACTCGTTTGGCTCCAAGATCT
TCATTGAGATCAACATCGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCC
AGATCATCCTCAATTTCGTCGACGAAGTGATTTCGGAAGCTCAAGTATTA
CTTCACAAGAACTACCAGGACAAATGACACAATTTAAGTTGAACTCCTTA
ACAAATAACATGCGCCGAATGAGTCGTACAAGTCAGCGTAGTAACCAACA
TTGCACGTCACTATGGTACACTAATCCAACTTTGAGCGGATCTCTTGAAA
ACATCACTGAATCATCGACACCAATATGCGGATCACCTCTAATGGAAGAA
AATCCGTATATAGATATTTTCCCCGATTTGGTGAATCAAGAACCTGATTC
GGAAGATGACGAGGATGATGAAACCGAAGATGATACCGATGATATGAATC
ATTATCGAAAGTTCCCGAGAAACACTCAGCGACCGAAAACACaatatcaa
agaagaaatcgtAGTGCGACGGTAATGCATAATACGCAGTTAACAGATCA
AAAGTTGAACATTGACAGGTTGTATGATAAAACACTTAATCGCCAGCGCT
CTCGATCTTTACCAGaatgtaaaataaaagagaacATTGAAAAAAACTTA
AGTTTTAGTCCTGAACTACCACCTTTCCAACCAAAGACATGtagcaagaa
aaaacaaagacTTTTTCCACGTATATCCTTTAAGATCAAGCTCAGAACTA
GATCAAAAACAACTTCTTTACAGGAATGTAGAAAATGCTCATTCCCTGGG
ACTGTTGGATGTCACTTGAAAATCAGTAATATATCAAACACAACTTCTGC
TCCAAATACCAATGGACGTTTCCGAGCAGAGACGTTACcgtattgaaagt
ttttataCGTAAGTAACAGGAATCAGTTGGTTGATTTAAACCATTTTCGT
AGAGCTTTACCCGATGTTATACTATTTCGGAAAGTTCCCTAATGTACATA
AAAGGATTGAAAGAAAACATCACATTGGACCTCATGAGAtatttctggct
gaaaaaaacaCGTAGTTGTTGGACACGACCACGTACCCGTATATAAACTG
AATCTGTGTGTGCAAATTTGCGTGTCATAAATGACCCAAGtaaaccccac
tgggaaattattgcttttttttcg
Run BLAST on NCBI

protein sequence of TCONS_00060537-protein

>TCONS_00060537-protein ID=TCONS_00060537-protein|Name=TCONS_00060537-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
EGTWSQLGACQPRGRCQWNMYRCNKTSHGGVYCYCTHTAGPSTPGKAVSD
DIDRWNVTIIGITSALVFLIIIVCVGIIALFCTKYRSRKRQDSQNTAESS
IYADINELQLNLKYNNQRSYSANSTHTIGSTCSGSALNNAYEPTRLAPRS
SLRSTSSSVASSLFAGPDHPQFRRRSDFGSSSITSQELPGQMTQFKLNSL
TNNMRRMSRTSQRSNQHCTSLWYTNPTLSGSLENITESSTPICGSPLMEE
NPYIDIFPDLVNQEPDSEDDEDDETEDDTDDMNHYRKFPRNTQRPKTQYQ
RRNRSATVMHNTQLTDQKLNIDRLYDKTLNRQRSRSLPECKIKENIEKNL
SFSPELPPFQPKTCSKKKQRLFPRISFKIKLRTRSKTTSLQECRKCSFPG
TVGCHLKISNISNTTSAPNTNGRFRAETLPY
Run BLAST on NCBI

transcript from alignment at scaffold_344:245438..250927+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060537 ID=TCONS_00060537|Name=TCONS_00060537|organism=Clytia hemisphaerica|type=transcript|length=5490bp|location=Sequence derived from alignment at scaffold_344:245438..250927+ (Clytia hemisphaerica)
GAAGGAACATGGAGTCAACTTGGTGCATGCCAACGTAAGTCACCTTATAG
GTGAACtatattgggctattccagaaatagtctttacccctatgttgagg
aggtgtgacgtccagggtggtctagaaataaaataatccagggtggtctg
taaaatgaggttgaaaatccaggatGGTCCAAAAGATTGATGCGAGAAAA
AACCCAAAAGAGTcctgaaaaatcggaaaaaatctAGGGGGTCACCTTTG
AAAgaaagacctcctcaacataggggatAAAATTTTGTCCTGGAATAGCT
CATTCCGGCTCATTTGAGAGAAGATTCTGTTAATCATTGTAAACTGTATC
TATACGCTATCAAAGTGAGCTTTTTAACACCGCCCCTTCTCACCCGGTAG
GATGTTCTCAGCCAGTGGGGTTAAaagtaacggactgaaactcgatgggg
gttgatattcccatattccttCGTAGCCGGGGGTTTAAAttatttgtttt
caagtcagaaaattcagcggGGATCGGAAAATTAGCATaatattttacag
tgaggattggtttatttaattattttcagtggcAATAAAAATgagaggat
aattttccaccggagaCAAtactttggcaaatttttccagtgggaagggt
tcccagtgggtctgtgagaagggggtggtTTTTACAATctcaatttcaat
atttttacaatcgcTTTACGTATTCTACAAGGGCCCAAATCACTCCTATC
GCAATATCACCAAAAGTTCTTTGTGGTACACGCTGTATTGAAAGAGAAAA
TTTCTCGTATAAATAAGATATTGCCAGAGTCTACCTTCCCTTGTTGTTTT
CCCATAAACTAatgattgaaatgaaatttctatGACCTTTTCACAGCGAG
AGGACGATGCCAGTGGAATATGTATAGATGTAACAAAACAAGTCATGGTG
GTGTTTATTGTTATTGTACACACACAGCAGGTATTAAGTACTTAATTCCT
TCATTAAacttcccgtttcatatcagacacatatttcatatcaggacagc
gCCTGCCTATGGTGGGTGTAAAACTTTTAGATTAGAAGGGTCGTAGACTG
AATCCCGgtttatttcataaaaaatgaccaaaataagtatgaaatattta
atagttttcaaaataaagcTTAAGACCTTTTTATATCTTTCGGATTTTTC
TTTCTCGAGATTAAATAAAACCGCATtctattggctcatttaagatTTCC
GTCAAATTAAGaatagttttcttttgttttcaaatgttAGATGAAACAGC
AAAAGTGTAACGAAGTTTAAAGCATTCCTGTGTATNTTTTGTTTTCAAAT
GTTAGATGAAGTAGTGAAAGTGTAACGAAGTTTAAAGCATTCCTGTGTAT
CATGTATTATATAACTTTATAGTCAAGATTGTGGGGGTGGCTATTATATA
TGTTTGAACAGGGGCCgcggctccactttgaaagtgGTAGGGCCATGgtt
tagtgtctaaggaggcgccaccatggttagCACCGACGggagaaagtttt
gaaaattagccCTTCTAGACTGCCTAAAACAagtctttttcaaggttttt
acgcAGATTTTAGCTGAgtcagtaaattttctttttgttttgaaaaaatg
tggtcgggCAAAGGCCCGGGTAGCCCCCTTCCCGCTGCCGCGGCCCCTTG
TTGAAGCGTTTGTTATAATTTTTTGATAgtatttatataattttttctga
tAAAGAAAACAATGCTGAACTTCTATCCTTATCGTcattaaggcccatct
acaccAGGGAAAGCAGTTTCTGATGACATCGATCGATGGAATGTTACAAT
CATTGGAATTACATCAGCTCTGGTTTTCTTGATCATTATCGTTTGTGTTG
GAATCATTGCATTGTTCTGCACCAAATATCGATCACGCAAACGACAAGAC
TCGCAAAATACTGCAGAATCCAGGTATAAAAAACAATTCATAACTAGCCA
GCTCCTGGCCATTGTTTCTATTGCCTATGGTCAGTTTTAAATAGGCCAGT
TTCTCTAGCGgcttttttttaccaaaaatcgTGCGGAGTTTACTTTGCAG
AAGCCTTTGGAATGATTGAGTTTTGTGCAAAATAATTAAATCCAAAATCC
AATGCTGCAATGCCACATTGCACTGCTATGAAAATTAGCATCGTCGTAAT
TAAAgctaaaaagtagaaaaaaaccAATGAGAAAAGAATTGGCTTACCAT
TACCTGTGCTGTTCTGACATAAAAAAATacttaatataaaaaaaaacgta
ttgATTTACCCTGGCTCAAACTCAACGATAGAAAAAATTCATTATGGAAA
GTAATCGCAAGGATAACGACCTGATACTAAATTTATGACAAATGCAGTAT
AATCGAATTTAAGCTTACTGCAAGGTTGATAATCCCAGGAAACTTCAAAC
GATGaatcttgaatatttttatgattctcatgcaccattgcaatgtcttc
tggaATTACATCACGGAGCCAATAGCTGATGGTTGTAAGTGATGTAAAGT
Cagtcaagatgtcaatttcaaccaatcaactgttgggtacctggaagaca
ttgcaatggtgtatatcatgaattcacGTCTGATTATTGATTCCAATTAC
TTCTATAGCATTTACGCTGACATTAACGAGCTGCAATTAAACTTGAAGTA
CAACAACCAACGCTCATATTCGGCCAACAGTACTCACACCATCGGCTCCA
CATGTAGTGGTTCCGCATTAAACAATGCTTATGAACCTACTCGTTTGGCT
CCAAGATCTTCATTGAGATCAACATCGTCATCAGGTGAGCCTTCGTTTca
tcaaggatttattatacactggatatacaagtacctgatttttgctgatt
tctcatgttctagctatgtccgcagtaatgatattattgttcactctcct
accctcattaaatgatttttcgatacattttaatttcgttttatataaaa
aatcactcatccaattcccaaaagagacttaaaactttcccgtgagagtc
agattcttctaGAATATCTCGTgttactataagcattttgtttgattttt
cttgtctaatgatgtttttctcacattagacttcacaaatgtatccggct
tggtattctagccttactttcaaagttttttccctgcaaaggtacgaaaa
gaaaacgctagagaacttttttaaaatgagatNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAtttgagccgccat
gacagttgtcctttgcggacatagctagaacatcaattgttttctgaaac
aaagaaaatacaatggtcgctctccaccgttttattaGTCATTTATCCAG
TGTCTCTTATAATTCCTTGGTTTCATCCTTAAACAGGGTTTTTTTTATGG
TCATGACGTTCAAAGGAACGTCCATTAATCGTCCAAACAATGTCGAAACG
ATGTTTTTGCTTGTACTCTGCTACAGAGGAAAGCAAAaacatcaatttga
aatctGCAGATtcttacacccccttctcacagacccggtaggattttttc
agccagtggagaTATAAATACGAACttaaactcgatggggattgatattc
ccatatttttttatggctgaggatttcagttcttttgttttcaagtcaga
aaattcagtggagatggaaaaaaatagtaagtattttgcagcgaggattg
GCTTTTCGATTCTTTTCAGCGAATataaaaattggaggataactttccag
tgggaagggctCCCAGTGGGTTTTTGGGTCTTCTACACGTGTTAAgtatt
gaatcataggaatcattaTATATGATGGTTTCATTGATCCTAAGGCTTAA
GATCTCCGTGATCAACATAAAGATAATATTTCGCAGTATTAATCGTTTAA
CGTTAAATTCCTCAAAATATTAACCTTCTTCTCATTCCCTTATTAGTTGC
TAGTTCGTTATTTGCTGGTCCAGATCATCCTCAATTTCGTCGACGAAGTG
ATTTCGGAAGCTCAAGTATTACTTCACAAGAACTACCAGGACAAATGACA
CAATTTAAGTTGAACTCCTTAACAAATAACATGGTAGGTTGATTAATTAG
TCGTGAAAAATTAGTTacgaaaaatcaaagaaattccTCCGTGAAAACAA
AATCCTGGTGGTCGGTAGCAAAACGTTAATAAGCCAACCCAAGCGTTTTG
TGTGATAGTGTTACCAGGGCCTCTTTTCTTGCCTGATGAAGTGGTTCGAA
TATTTTTGGCATGGTGACACGATTTAGATTTCGTGATGTGAGGAAgggca
aaaataattttaggcATATAATGCGTGTTTTGGACTATTGACCTTAAAAC
GAGAATAAATTTTATGATTTGCTTTTAGCGCCGAATGAGTCGTACAAGTC
AGCGTAGTAACCAACATTGCACGTCACTATGGTACACTAATCCAACTTTG
AGCGGATCTCTTGAAAACATCACTGAATCATCGACACCAATATGCGGATC
ACCTCTAATGGAAGAAAATCCGTATATAGATATTTTCCCCGATTTGGTGA
ATCAAGAACCTGATTCGGAAGATGACGAGGATGATGAAACCGAAGATGAT
ACCGATGATATGAATCATTATCGAAAGTTCCCGAGAAACACTCAGCGACC
GAAAACACaatatcaaagaagaaatcgtAGTGCGACGGTAATGCATAATA
CGCAGTTAACAGATCAAAAGTTGAACATTGACAGGTTGTATGATAAAACA
CTTAATCGCCAGCGCTCTCGATCTTTACCAGaatgtaaaataaaagagaa
cATTGAAAAAAACTTAAGTTTTAGTCCTGAACTACCACCTTTCCAACCAA
AGACATGtagcaagaaaaaacaaagacTTTTTCCACGTATATCCTTTAAG
ATCAAGCTCAGAACTAGATCAAAAACAACTTCTTTACAGGAATGTAGAAA
ATGCTCATTCCCTGGGACTGTTGGATGTCACTTGAAAATCAGTAATATAT
CAAACACAACTTCTGCTCCAAATACCAATGGACGTTTCCGAGCAGAGACG
TTACcgtattgaaagtttttataCGTAAGTAACAGGAATCAGTTGGTTGA
TTTAAACCATTTTCGTAGAGCTTTACCCGATGTTATACTATTTCGGAAAG
TTCCCTAATGTACATAAAAGGATTGAAAGAAAACATCACATTGGACCTCA
TGAGAtatttctggctgaaaaaaacaCGTAGTTGTTGGACACGACCACGT
ACCCGTATATAAACTGAATCTGTGTGTGCAAATTTGCGTGTCATAAATGA
CCCAAGtaaaccccactgggaaattattgcttttttttcg

Coding sequence (CDS) from alignment at scaffold_344:245438..250927+

>TCONS_00060537 ID=TCONS_00060537|Name=TCONS_00060537|organism=Clytia hemisphaerica|type=CDS|length=7776bp|location=Sequence derived from alignment at scaffold_344:245438..250927+ (Clytia hemisphaerica)
GAAGGAACATGGAGTCAACTTGGTGCATGCCAACCGAGAGGACGATGCCA
GTGGAATATGTATAGATGTAACAAAACAAGTCATGGTGGTGTTTATTGTT
ATTGTACACACACAGCAGgcccatctacaccAGGGAAAGCAGTTTCTGAT
GACATCGATCGATGGAATGTTACAATCATTGGAATTACATCAGCTCTGGT
TTTCTTGATCATTATCGTTTGTGTTGGAATCATTGCATTGTTCTGCACCA
AATATCGATCACGCAAACGACAAGACTCGCAAAATACTGCAGAATCCAGC
ATTTACGCTGACATTAACGAGCTGCAATTAAACTTGAAGTACAACAACCA
ACGCTCATATTCGGCCAACAGTACTCACACCATCGGCTCCACATGTAGTG
GTTCCGCATTAAACAATGCTTATGAACCTACTCGTTTGGCTCCAAGATCT
TCATTGAGATCAACATCGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCC
AGATCATCCTCAATTTCGTCGACGAAGTGATTTCGGAAGCTCAAGTATTA
CTTCACAAGAACTACCAGGACAAATGACACAATTTAAGTTGAACTCCTTA
ACAAATAACATGCGCCGAATGAGTCGTACAAGTCAGCGTAGTAACCAACA
TTGCACGTCACTATGGTACACTAATCCAACTTTGAGCGGATCTCTTGAAA
ACATCACTGAATCATCGACACCAATATGCGGATCACCTCTAATGGAAGAA
AATCCGTATATAGATATTTTCCCCGATTTGGTGAATCAAGAACCTGATTC
GGAAGATGACGAGGATGATGAAACCGAAGATGATACCGATGATATGAATC
ATTATCGAAAGTTCCCGAGAAACACTCAGCGACCGAAAACACaatatcaa
agaagaaatcgtAGTGCGACGGTAATGCATAATACGCAGTTAACAGATCA
AAAGTTGAACATTGACAGGTTGTATGATAAAACACTTAATCGCCAGCGCT
CTCGATCTTTACCAGaatgtaaaataaaagagaacATTGAAAAAAACTTA
AGTTTTAGTCCTGAACTACCACCTTTCCAACCAAAGACATGtagcaagaa
aaaacaaagacTTTTTCCACGTATATCCTTTAAGATCAAGCTCAGAACTA
GATCAAAAACAACTTCTTTACAGGAATGTAGAAAATGCTCATTCCCTGGG
ACTGTTGGATGTCACTTGAAAATCAGTAATATATCAAACACAACTTCTGC
TCCAAATACCAATGGACGTTTCCGAGCAGAGACGTTACcgtattgaGAAG
GAACATGGAGTCAACTTGGTGCATGCCAACCGAGAGGACGATGCCAGTGG
AATATGTATAGATGTAACAAAACAAGTCATGGTGGTGTTTATTGTTATTG
TACACACACAGCAGgcccatctacaccAGGGAAAGCAGTTTCTGATGACA
TCGATCGATGGAATGTTACAATCATTGGAATTACATCAGCTCTGGTTTTC
TTGATCATTATCGTTTGTGTTGGAATCATTGCATTGTTCTGCACCAAATA
TCGATCACGCAAACGACAAGACTCGCAAAATACTGCAGAATCCAGCATTT
ACGCTGACATTAACGAGCTGCAATTAAACTTGAAGTACAACAACCAACGC
TCATATTCGGCCAACAGTACTCACACCATCGGCTCCACATGTAGTGGTTC
CGCATTAAACAATGCTTATGAACCTACTCGTTTGGCTCCAAGATCTTCAT
TGAGATCAACATCGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCCAGAT
CATCCTCAATTTCGTCGACGAAGTGATTTCGGAAGCTCAAGTATTACTTC
ACAAGAACTACCAGGACAAATGACACAATTTAAGTTGAACTCCTTAACAA
ATAACATGCGCCGAATGAGTCGTACAAGTCAGCGTAGTAACCAACATTGC
ACGTCACTATGGTACACTAATCCAACTTTGAGCGGATCTCTTGAAAACAT
CACTGAATCATCGACACCAATATGCGGATCACCTCTAATGGAAGAAAATC
CGTATATAGATATTTTCCCCGATTTGGTGAATCAAGAACCTGATTCGGAA
GATGACGAGGATGATGAAACCGAAGATGATACCGATGATATGAATCATTA
TCGAAAGTTCCCGAGAAACACTCAGCGACCGAAAACACaatatcaaagaa
gaaatcgtAGTGCGACGGTAATGCATAATACGCAGTTAACAGATCAAAAG
TTGAACATTGACAGGTTGTATGATAAAACACTTAATCGCCAGCGCTCTCG
ATCTTTACCAGaatgtaaaataaaagagaacATTGAAAAAAACTTAAGTT
TTAGTCCTGAACTACCACCTTTCCAACCAAAGACATGtagcaagaaaaaa
caaagacTTTTTCCACGTATATCCTTTAAGATCAAGCTCAGAACTAGATC
AAAAACAACTTCTTTACAGGAATGTAGAAAATGCTCATTCCCTGGGACTG
TTGGATGTCACTTGAAAATCAGTAATATATCAAACACAACTTCTGCTCCA
AATACCAATGGACGTTTCCGAGCAGAGACGTTACcgtattgaGAAGGAAC
ATGGAGTCAACTTGGTGCATGCCAACCGAGAGGACGATGCCAGTGGAATA
TGTATAGATGTAACAAAACAAGTCATGGTGGTGTTTATTGTTATTGTACA
CACACAGCAGgcccatctacaccAGGGAAAGCAGTTTCTGATGACATCGA
TCGATGGAATGTTACAATCATTGGAATTACATCAGCTCTGGTTTTCTTGA
TCATTATCGTTTGTGTTGGAATCATTGCATTGTTCTGCACCAAATATCGA
TCACGCAAACGACAAGACTCGCAAAATACTGCAGAATCCAGCATTTACGC
TGACATTAACGAGCTGCAATTAAACTTGAAGTACAACAACCAACGCTCAT
ATTCGGCCAACAGTACTCACACCATCGGCTCCACATGTAGTGGTTCCGCA
TTAAACAATGCTTATGAACCTACTCGTTTGGCTCCAAGATCTTCATTGAG
ATCAACATCGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCCAGATCATC
CTCAATTTCGTCGACGAAGTGATTTCGGAAGCTCAAGTATTACTTCACAA
GAACTACCAGGACAAATGACACAATTTAAGTTGAACTCCTTAACAAATAA
CATGCGCCGAATGAGTCGTACAAGTCAGCGTAGTAACCAACATTGCACGT
CACTATGGTACACTAATCCAACTTTGAGCGGATCTCTTGAAAACATCACT
GAATCATCGACACCAATATGCGGATCACCTCTAATGGAAGAAAATCCGTA
TATAGATATTTTCCCCGATTTGGTGAATCAAGAACCTGATTCGGAAGATG
ACGAGGATGATGAAACCGAAGATGATACCGATGATATGAATCATTATCGA
AAGTTCCCGAGAAACACTCAGCGACCGAAAACACaatatcaaagaagaaa
tcgtAGTGCGACGGTAATGCATAATACGCAGTTAACAGATCAAAAGTTGA
ACATTGACAGGTTGTATGATAAAACACTTAATCGCCAGCGCTCTCGATCT
TTACCAGaatgtaaaataaaagagaacATTGAAAAAAACTTAAGTTTTAG
TCCTGAACTACCACCTTTCCAACCAAAGACATGtagcaagaaaaaacaaa
gacTTTTTCCACGTATATCCTTTAAGATCAAGCTCAGAACTAGATCAAAA
ACAACTTCTTTACAGGAATGTAGAAAATGCTCATTCCCTGGGACTGTTGG
ATGTCACTTGAAAATCAGTAATATATCAAACACAACTTCTGCTCCAAATA
CCAATGGACGTTTCCGAGCAGAGACGTTACcgtattgaGAAGGAACATGG
AGTCAACTTGGTGCATGCCAACCGAGAGGACGATGCCAGTGGAATATGTA
TAGATGTAACAAAACAAGTCATGGTGGTGTTTATTGTTATTGTACACACA
CAGCAGgcccatctacaccAGGGAAAGCAGTTTCTGATGACATCGATCGA
TGGAATGTTACAATCATTGGAATTACATCAGCTCTGGTTTTCTTGATCAT
TATCGTTTGTGTTGGAATCATTGCATTGTTCTGCACCAAATATCGATCAC
GCAAACGACAAGACTCGCAAAATACTGCAGAATCCAGCATTTACGCTGAC
ATTAACGAGCTGCAATTAAACTTGAAGTACAACAACCAACGCTCATATTC
GGCCAACAGTACTCACACCATCGGCTCCACATGTAGTGGTTCCGCATTAA
ACAATGCTTATGAACCTACTCGTTTGGCTCCAAGATCTTCATTGAGATCA
ACATCGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCCAGATCATCCTCA
ATTTCGTCGACGAAGTGATTTCGGAAGCTCAAGTATTACTTCACAAGAAC
TACCAGGACAAATGACACAATTTAAGTTGAACTCCTTAACAAATAACATG
CGCCGAATGAGTCGTACAAGTCAGCGTAGTAACCAACATTGCACGTCACT
ATGGTACACTAATCCAACTTTGAGCGGATCTCTTGAAAACATCACTGAAT
CATCGACACCAATATGCGGATCACCTCTAATGGAAGAAAATCCGTATATA
GATATTTTCCCCGATTTGGTGAATCAAGAACCTGATTCGGAAGATGACGA
GGATGATGAAACCGAAGATGATACCGATGATATGAATCATTATCGAAAGT
TCCCGAGAAACACTCAGCGACCGAAAACACaatatcaaagaagaaatcgt
AGTGCGACGGTAATGCATAATACGCAGTTAACAGATCAAAAGTTGAACAT
TGACAGGTTGTATGATAAAACACTTAATCGCCAGCGCTCTCGATCTTTAC
CAGaatgtaaaataaaagagaacATTGAAAAAAACTTAAGTTTTAGTCCT
GAACTACCACCTTTCCAACCAAAGACATGtagcaagaaaaaacaaagacT
TTTTCCACGTATATCCTTTAAGATCAAGCTCAGAACTAGATCAAAAACAA
CTTCTTTACAGGAATGTAGAAAATGCTCATTCCCTGGGACTGTTGGATGT
CACTTGAAAATCAGTAATATATCAAACACAACTTCTGCTCCAAATACCAA
TGGACGTTTCCGAGCAGAGACGTTACcgtattgaGAAGGAACATGGAGTC
AACTTGGTGCATGCCAACCGAGAGGACGATGCCAGTGGAATATGTATAGA
TGTAACAAAACAAGTCATGGTGGTGTTTATTGTTATTGTACACACACAGC
AGgcccatctacaccAGGGAAAGCAGTTTCTGATGACATCGATCGATGGA
ATGTTACAATCATTGGAATTACATCAGCTCTGGTTTTCTTGATCATTATC
GTTTGTGTTGGAATCATTGCATTGTTCTGCACCAAATATCGATCACGCAA
ACGACAAGACTCGCAAAATACTGCAGAATCCAGCATTTACGCTGACATTA
ACGAGCTGCAATTAAACTTGAAGTACAACAACCAACGCTCATATTCGGCC
AACAGTACTCACACCATCGGCTCCACATGTAGTGGTTCCGCATTAAACAA
TGCTTATGAACCTACTCGTTTGGCTCCAAGATCTTCATTGAGATCAACAT
CGTCATCAGTTGCTAGTTCGTTATTTGCTGGTCCAGATCATCCTCAATTT
CGTCGACGAAGTGATTTCGGAAGCTCAAGTATTACTTCACAAGAACTACC
AGGACAAATGACACAATTTAAGTTGAACTCCTTAACAAATAACATGCGCC
GAATGAGTCGTACAAGTCAGCGTAGTAACCAACATTGCACGTCACTATGG
TACACTAATCCAACTTTGAGCGGATCTCTTGAAAACATCACTGAATCATC
GACACCAATATGCGGATCACCTCTAATGGAAGAAAATCCGTATATAGATA
TTTTCCCCGATTTGGTGAATCAAGAACCTGATTCGGAAGATGACGAGGAT
GATGAAACCGAAGATGATACCGATGATATGAATCATTATCGAAAGTTCCC
GAGAAACACTCAGCGACCGAAAACACaatatcaaagaagaaatcgtAGTG
CGACGGTAATGCATAATACGCAGTTAACAGATCAAAAGTTGAACATTGAC
AGGTTGTATGATAAAACACTTAATCGCCAGCGCTCTCGATCTTTACCAGa
atgtaaaataaaagagaacATTGAAAAAAACTTAAGTTTTAGTCCTGAAC
TACCACCTTTCCAACCAAAGACATGtagcaagaaaaaacaaagacTTTTT
CCACGTATATCCTTTAAGATCAAGCTCAGAACTAGATCAAAAACAACTTC
TTTACAGGAATGTAGAAAATGCTCATTCCCTGGGACTGTTGGATGTCACT
TGAAAATCAGTAATATATCAAACACAACTTCTGCTCCAAATACCAATGGA
CGTTTCCGAGCAGAGACGTTACcgtattgaGAAGGAACATGGAGTCAACT
TGGTGCATGCCAACCGAGAGGACGATGCCAGTGGAATATGTATAGATGTA
ACAAAACAAGTCATGGTGGTGTTTATTGTTATTGTACACACACAGCAGgc
ccatctacaccAGGGAAAGCAGTTTCTGATGACATCGATCGATGGAATGT
TACAATCATTGGAATTACATCAGCTCTGGTTTTCTTGATCATTATCGTTT
GTGTTGGAATCATTGCATTGTTCTGCACCAAATATCGATCACGCAAACGA
CAAGACTCGCAAAATACTGCAGAATCCAGCATTTACGCTGACATTAACGA
GCTGCAATTAAACTTGAAGTACAACAACCAACGCTCATATTCGGCCAACA
GTACTCACACCATCGGCTCCACATGTAGTGGTTCCGCATTAAACAATGCT
TATGAACCTACTCGTTTGGCTCCAAGATCTTCATTGAGATCAACATCGTC
ATCAGTTGCTAGTTCGTTATTTGCTGGTCCAGATCATCCTCAATTTCGTC
GACGAAGTGATTTCGGAAGCTCAAGTATTACTTCACAAGAACTACCAGGA
CAAATGACACAATTTAAGTTGAACTCCTTAACAAATAACATGCGCCGAAT
GAGTCGTACAAGTCAGCGTAGTAACCAACATTGCACGTCACTATGGTACA
CTAATCCAACTTTGAGCGGATCTCTTGAAAACATCACTGAATCATCGACA
CCAATATGCGGATCACCTCTAATGGAAGAAAATCCGTATATAGATATTTT
CCCCGATTTGGTGAATCAAGAACCTGATTCGGAAGATGACGAGGATGATG
AAACCGAAGATGATACCGATGATATGAATCATTATCGAAAGTTCCCGAGA
AACACTCAGCGACCGAAAACACaatatcaaagaagaaatcgtAGTGCGAC
GGTAATGCATAATACGCAGTTAACAGATCAAAAGTTGAACATTGACAGGT
TGTATGATAAAACACTTAATCGCCAGCGCTCTCGATCTTTACCAGaatgt
aaaataaaagagaacATTGAAAAAAACTTAAGTTTTAGTCCTGAACTACC
ACCTTTCCAACCAAAGACATGtagcaagaaaaaacaaagacTTTTTCCAC
GTATATCCTTTAAGATCAAGCTCAGAACTAGATCAAAAACAACTTCTTTA
CAGGAATGTAGAAAATGCTCATTCCCTGGGACTGTTGGATGTCACTTGAA
AATCAGTAATATATCAAACACAACTTCTGCTCCAAATACCAATGGACGTT
TCCGAGCAGAGACGTTACcgtattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038078XLOC_038078Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060537-proteinTCONS_00060537-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060537-exon-scaffold_344-1491911889:245438..245471TCONS_00060537-exon-scaffold_344-1491911889:245438..245471Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:245438..245471TCONS_00060537-exon-scaffold_344-1510915933:245438..245471Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:245438..245471TCONS_00060537-exon-scaffold_344-1575043694:245438..245471Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1491911889:246334..246417TCONS_00060537-exon-scaffold_344-1491911889:246334..246417Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:246334..246417TCONS_00060537-exon-scaffold_344-1510915933:246334..246417Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:246334..246417TCONS_00060537-exon-scaffold_344-1575043694:246334..246417Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1491911889:247230..247410TCONS_00060537-exon-scaffold_344-1491911889:247230..247410Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:247230..247410TCONS_00060537-exon-scaffold_344-1510915933:247230..247410Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:247230..247410TCONS_00060537-exon-scaffold_344-1575043694:247230..247410Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1491911889:248096..248271TCONS_00060537-exon-scaffold_344-1491911889:248096..248271Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:248096..248271TCONS_00060537-exon-scaffold_344-1510915933:248096..248271Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:248096..248271TCONS_00060537-exon-scaffold_344-1575043694:248096..248271Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1491911889:249534..249670TCONS_00060537-exon-scaffold_344-1491911889:249534..249670Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:249534..249670TCONS_00060537-exon-scaffold_344-1510915933:249534..249670Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:249534..249670TCONS_00060537-exon-scaffold_344-1575043694:249534..249670Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1491911889:249966..250927TCONS_00060537-exon-scaffold_344-1491911889:249966..250927Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1510915933:249966..250927TCONS_00060537-exon-scaffold_344-1510915933:249966..250927Clytia hemisphaericaexon
TCONS_00060537-exon-scaffold_344-1575043694:249966..250927TCONS_00060537-exon-scaffold_344-1575043694:249966..250927Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_344supercontigscaffold_344:245438..250927 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0350503	0.0830918	0.969051	1.43903	0.678966	0.759621	0.710974	0.536606	0.484003	1.2566	0.590342	1.63133	0.331693	0.859936	2.5695	1.01191	1.13083	0.992844	0.923825	1.02954	2.03709	1.94258	0	0	0.028848	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060537 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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