TCONS_00060509 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060509
Unique NameTCONS_00060509
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3267

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060509 ID=TCONS_00060509|Name=TCONS_00060509|organism=Clytia hemisphaerica|type=transcript|length=3267bp
AGACAAagtagcaaaattttcaaaattgttgtgTGAAGCTGGCACCAGAG
AGATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCATTTAACAAC
ATTGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATGTCCTTCAAA
TTTTCGGaaacaaacattttttgagaatttgaaaatcaacaaTGTCATCA
TTGGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGACCGTTAAACTGCTA
GGCGTCATGGAAGGTCAGAAAAGATGGATAAAAGATTTGCAAATCACGGC
ACGATTGGTGATCACAAagtcttatgatgatgatgttgATGAAGATTATG
AAGTTGGAGATCTTGTCAAAGCGCTTGTGGAGAAAGTTGATGTACAATCC
AAAGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAAATCCCAATA
CCAATTGCCTAAGCTGGGCAAAATTCAGGACCCAGATACCGTTGAGTATC
TTTTGGAAAGCCGTgaatttgatgaagaaaatgACTCAGCATATTTGGAA
CACATACGCGATAGTTCACTTTTCAATCATCCACACGGTGTTTCATTACT
GGCAAGTCATTTTAATGTCAACCAAGACCATCATGGGTTTGTTGTATGTA
ACACGCTTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAGAAACAAATG
CTTGATTGGTCAATGAGCATGGTTGGGATTGGTGTGAAACATTTTCGTGA
GAAGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTCTCAGCTTTT
ATCCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTGAAAGCTAAT
CAAAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGCGTTAGAAGT
CAATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAACTTCACTCT
CCTTAGCACGAAGTCACGAGAAAGAGAAGCGTTGGAAAGAAAGTTCAAAG
TGTTATCACGAGATTATGAAACATGATCCAGATCATAAAGAAGCAAAAGA
AAGATATCATCAAATTCATCAAATACTGTCTTCTAAGGTAACCGCTATCC
ATATCTTAATGGTGTCACGTGACTTAATTCTGTATGtcaagtttgttttg
ttttggtattAGGCGCTATCAAGCAACCAATTTCTCCAACCTAATCTAGA
TTTGGAATCTAGGAAAatgttgagaaaaaaaatagtgCTTCATTGTGcct
ttgtttcattttttttgtaattctaaCATTTCTTTTCTGATAGTTCACAC
CCCTCTTATTCTGACAGAAATCTATTTTGTCGAAATTCCAAGTATTTAAA
CATTTATAATTTATAAGACAGGAAACAGAAACTTTTACCATATTTTCCAC
AATTTTTTAAAAGCTCTTTCGTGATCTTTGAAGACAGTAGTACCCACAAG
GTACTAACtgcaaattccaaaaatgaaatatgacccaccacggtactaac
cgtcATGATGTCTGGTACCAACTGCATGACCCCTCCCCCtggaaaaaatg
ttaaatgcCAAACAGCTCTAGAATGGTTGGAGACGTTTAACTAAACGTAT
TTGCTATTCTTCTTCTCTTTTCATAAATCCTTGGCTTGTATTCTGTTTCA
TCTCCAACAAATCATTTGATATCTTTAACTCCATCAAACTTCTATATCAA
TACAATTTGCAACTGGATGATTGGTGACCTCATTGGAATTGCTGTAATGT
ACAATGTTATCATTTCTCTATTTTAATTGATATTTTACTGCAAACgattt
caaacttttattggacCTTTTTACTCATCATTTGACAAATGAATTGCTAT
TTTTTGCTTGTATTTTGATAATGATCTAATCCCTAACTTTTTAAACATTG
TCAACTCTATCCATTAACTATATCCAACTGTGTGAAATATGTGGTATTAT
GTTCATCACATAATGTTCAATCCAATCAAACAATGACGTCACATCCTTTA
TTATTTCCACTGGAACCCAAACTAAATCTACGCtatatatacaaaaattt
ggTTCCACCATGCATTATCGCCACACTTATTACTTATTTTCTGTAAAACG
TGGAGATTATAAGCGGTCGAGAAGCAGCGAAAAATGAAGAGACAAGTTCC
CATCGTCGTAACAGTGCAAGTAGCAAGACGAAGGATCGTATCGAACAGTT
GAAACGTTTGCTACAAGAAGATACAAACAAAAATTCCTCAAGCTCTTCTT
CAACTTCTTCTTCATCCTCTTCGTCATcggaaagtgaaagtgaaagtaat
tcATCATCGGGCGAGGACTGGATCGAGAAAACAAACTCAAAGTCAAGAAA
AAGAGTATCTGATCGCAAACGTAGGAGTCATCACAAACATTATTCATCAA
AATCGAGAAAGAATCGTAAACGGTCGAGAAAATCTTCGAGTCAATCTCCA
GAGAGACATTCTCGCAAGAACCTATACGAGACTTCAGAAACAAGTCGTAA
AGAAAGAGATTTTAAGTCAACTCACGAGCCTGGTGGAGCTTCAAATTTGT
TAGACAATAATGCTTTAGATAAGGATGCGAAACAGATTTTACGAAAACTT
AAAGACTTTTCTTCCGAGGAAATCGATATTGTTAAGAAAATGTTACGGAA
AAACGAATCGGCAGAAAATACTTCGAAGGATGATcgaaaagttgaagaaa
aatcGAAGGGCTATCGAGAAAGTAGACATTCACCGAGAAATTACCGTGAT
ACTGAAAAATCAACAAGAGATTATCGATCTTCTTTGTATTCTAGTCGAAA
TCGAGACGATTTGAGGAGAAACGAAGATCGATATGATCGAAAAGATGACT
ACAGACATTCCAAACGAGAGAAATATTCGAAACAATCGAGCTATGATCAA
AGGGATTAATCATTCTTTAGGACATTTTCTTTTATAGCGTAATTTTTCAT
ACACAAAtgtatttgaaaactcaattctTGTCAGTAATAGATACTCGGTA
ATACATATGGATCTATAATTTTATTGGGATGATTAGATGAACAGGCTGGG
CAAGATCTTTACCGATCCAATGACAGCTCTGTTTGTTATTCTGTCAGTTT
TTAAGGAGAGTAGAAATGTGTGCGTCAGAATAATTTCGCCAAAAAAATAA
TGTTCAATAGCAGGCGATGGGACTATGTGGTGAAAAGAGTTGACCTACTA
TACTATCATGTCCCACtcgatttttgaagtctttTCTTCGTATTAATGTG
TATATTTCATCCTTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_343:161831..169797-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060509 ID=TCONS_00060509|Name=TCONS_00060509|organism=Clytia hemisphaerica|type=transcript|length=7967bp|location=Sequence derived from alignment at scaffold_343:161831..169797- (Clytia hemisphaerica)
AGACAAAGTAGCAAAATTTTCAAAATTGTTGTGTGAAGCTGGCACCAGAG
AGATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCATTTAACAAC
ATTGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATGTCCTTCAAA
TTTTCGGAAACAAACATTTTTTGAGGTTTGTGCTCTTTCTTCAAAGTTAT
CATTTTTATACAGTGACTTACAAATTGTATTGCTCACGGTCCACTTGTCT
CTTCTTATACTTTTCTCAGCGAAATGTTTGTAATAATTCTTCAATTTACT
GCCCATTGCTTTTTATAGAATTTGAAAATCAACAATGTCATCATTGGAAA
GTTAGCTGTATGTTCTGCCAGTGGATGGACCGTTAAACTGCTAGGCGTCA
TGGAAGGTCAGAAAAGATGGATAAAAGATTTGCAAATCACGGTAAAGTAA
AGTCTTTCCTCATTCTCCGTTGGATCTTTTAAATGAATTTTGAATCTTTC
CAGGGCTTTTATTTTTGTACATCCTAAATAAAATTTGTAAAAGGTTGAAC
CTAAATTCAGAGCTTTACGATGCTTTTAGCAAATAGAAAACGTTATTGAT
CTACTCAGAAGATGTTTCAAATTTAATTTGTTATTTTCCAGGCACGATTG
GTGATCACAAAGTCTTATGATGATGATGTTGATGAAGATTATGAAGTTGG
AGATCTTGTCAAAGGTTTGTCTTTTAAAGATAATAAATCAAAGTTATGGA
TTTGTACGGATAAGCCATGAAAAATATTGAATGATTTTCAAAAGAACTAA
AACACTTACATGGATCCACCGAATACCTTTATTCTTAAAGAACGTCACTT
AATATGAATTCAATTTGTATTATTTACTGTACTAATATAATGAACTTGGG
CTAGAAGTTTACTTGAACTACAAAAAAGTTTTAAAGTTGCACATTCCATA
CAATTACACATTGATCAATGATATCAACTGCATATATTTGTTCCATATGT
TTTCATAAAGCTAACAACTCCAATGTTGTATTGAAAACCAAGCTGATGCT
AATAATATCTTGTTTTTTCAGCGCTTGTGGAGAAAGTTGATGTACAATCC
AAAGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAAATCCCAATA
CCAATTGCCTAAGCTGGTAAAAGTCATCGTTATTATTTCCGTGTTTAGGT
CCCCAATGACGTTACAGAATGTCAAAACAACGTCCATAACATTTTTAAAA
CATTAGATGAACGTTGAAACGATGCTCTGTGCGAGCTGGGGAGCTGGGGA
TTCACCAAATGGCTAACTCGCAGATTTCAAAAAAGCCCGAAGGGGTTGAT
AGAGTGCTTTGGCTGAAAAGTGTGATCACGTGACGTTACAATAAAATTTC
AGCGCTTGATCAATCAGAAGCTTCGCGGGTTTTCGAAAACAATAGCAGCA
ATACTTTTTCCAATATTCACTTTTTTTTGCTTGGAAAAGCTTAAAGCACG
CCATCTAGCCCTTCGGGCTTTACAATATACAAAAATCTTTGGGCTAACCC
TCTTAGTAATAATAACTGTATCCTTTTTGTTACTAAGCTCTGTTGCATTA
TTCTGTTAAGTAGCAGGATCGTTTAACTGAGGTAGTCCTTTTGTTTCTTT
TAATAAGCTGGGAATATTGTTTTTGTTTTCACAGGGCAAAATTCAGGACC
CAGATACCGTTGAGTAGTAAGTTAACATTCTTTTACAGTAATACAGATAA
CTGACTTTACTCTCCCATTTTTTACTCTTTAAAATCTGATCGTGTTTTTT
TTCTTTAACTTTCTCAAAAGTATTTCTCTTTTTAACTATATTAACCCTCT
TGAAAAACAATTCCTTATCGGTGCTCTCAAAGATTTTTAACTGACACTGC
ATAAATGTTTCTTCAGAACATTTTTCGAACAGTTTTTAACTCGTGATCTT
TCTTTACTTGCAGTCTTTTGGAAAGCCGTGAATTTGATGAAGAAAATGAC
TCAGCATATTTGGAACACATACGCGATAGTTCACTTTTCAATCATCCACA
CGGTGTTTCATTACTGGCAAGTCATTTTAATGTCAACCAAGACCATCATG
GGTTTGTTGTATGGTAAGTCTAATATTGATTTGTTGGAGACAAAATTTAC
TCCTAACTTTACATTTAAACCACTTCCCGAATTTTGAAATATAACTTGTG
TAAAGTACCTTTTAAATTTCATTGTTGATGTTTTTTTGTTCACCTTATCG
GCCCTTTTTACGCTGGCCCTAATTTAACGCCGGCCCTTATTACGCCACGA
GCCCAAAAATAACGCCAATAAAGGCCGGTGTAAAAAGGGCCGATAAGGTA
GTTTACATTTTATCTCCATTACTTTCAATCATTGGCTCTCAATAACAAAC
TAATATACTTTTTCCATCGCAGTAACACGCTTAAGATTAAAGAAACGGCT
CTTGAGCTTCGAGAGAAACAAATGCTTGATTGGTCAATGAGCATGTAAGT
AGTCACGTGATAATAACCACATTACGAATAAAATTGTCTTCAGTGTTGCA
GAGTCACGCTGATTTTTCGTCTTAGTCGAGGTAACACCCAGTAAAATTGA
CCTTTTCATAAATTACGTCACGAACATCATACTTGCCTCGTTTTGAAATT
ATTGCCAAGGTGATCTACTCCCAGTGGATTTTATTAAAACTACTTTCTAT
TTATAAAAAAATAATTTAATGTCTCAAGGGACATAGTCTCCATTGTAATT
GTTTGAATACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAGGTCT
ATGCAAATTGATTTCTTTTTTGAGTTCACAAGTTGGAAAATAGTTACTGA
AAGTTTCACTGAAAGTTCGAAACTTTCAATGTATTTTAAACTTTTTAAAA
CTTTTGATTATGTGTGTTTCAGGGTTGGGATTGGTGTGAAACATTTTCGT
GAGAAGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTCTCAGCTT
TTATCCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTGTAAGTCA
AATCCTGCGGCACATTTTAAACTCGCAGTTTATAAAATGAGGCTATATTT
TTGCTGTTTTGAGTTAGACATTAGTCTTAAAGATGGCTAATCCATGACCT
AGAAATATAGACAAGGCCTTTTAAAAATTCAAAATATAAAGCCACCATTA
GTTAACGTTGTTTTTGAATACATGAATGGTACGTTCTAGAATGATTTTAC
AAATATCCGAGATCTTTTTTCATTATCAGAACAAAACAAATATTAGCGAA
CAATTGCAACGAACACTACAAACATGTATGATATCCCTCCCCGCTAGGAT
CTTTAAAGTTATACCACCAGAGGTACTAGACTATGTAGAAAGAAAAGAAA
CAAAAATGTTATGAAAATGAATGTTAAATCCGAGATCTATATCTTTTAGG
AAAGCTAATCAAAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGC
GTTAGAAGTCAATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAA
CTTCACTCTCCTTAGCACGAAGGTAATAGTATTGTCATGTTGATATGCTC
TTCTGCCACGCATTCTTTTTTTATGAATAGTTTTTTTTTGCTGAGGGTTA
AGTATTCTCAGGAATCTTGCCTAAACTGAGGGTGAGATATTCTTAGTATT
AGTATATCTTTCGAATGTCGTTCTTTAAAGTCATTTAAAAACAAACGCAA
AGAAGTGATGACCTTATTATATGAAAATAGACAAAAGAAAAAAGTTGGGA
ATCGGGACTTAATGTCATGGCTTACATAAAAAGCTTAAGAAAGATTTCAT
CAAATACCATAATCAAATACGTCATGCACAATTGACAACGTCATTCTCAT
TAAGTATCACGCCCTGGTAGATTAATGCCGTACACCTTTTTGAAATCAAA
AAAGATTGAAGCGAGCTTAAACTAATTACGGTTAGTTATAAAGCCCAATT
GGAAATGGGGACAAGCCCTAAAAACTAAGACAAATTTTGTATGAATTTTT
TACCAATCTAAAAAGTAAAGCACCTAACCATGCAAACGCACCTATGAGGT
AGTCTTGTAAAATGAGACGATTAAAAAGAATCCGGCTGGATAAAGCTTCG
TGACTGGTGGTAGAACAAATGTTTGTTATTTGTAATGCAGGTCAGGTTCT
ATATACAAAATGATATACAATATATTATATACAATAGATCTTATCGGAGT
TTTTGATTTTTCTAAAAAAGTGATGTTTTGGGAGTATTACAATAGAAATC
TCTTAGGAATTCCTCGAGGGAATTCTATTGTAATACTCCCGAAACAATCC
CACAAAGAATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGATCTATT
TCATGTATATTGGCAGTAAAAACTGTTAGGTCAATAATGAGAATCAAACG
ACGGGTGATTAAAACAATCCCCAAATGGTTCGTTGTATCATCACTAAGTC
TGATTAAAAACAGTTTTTCTAATCCTTACAGTCACGAGAAAGAGAAGCGT
TGGAAAGAAAGTTCAAAGTGTTATCACGAGATTATGAAACATGATCCAGA
TCATAAAGAAGCAAAAGAAAGATATCATCAAATTCATCAAATACTGTCTT
CTAAGGTAACCGCTATCCATATCTTAATGGTGTCACGTGACTTAATTCTG
TATGTCAAGTTTGTTTTGTTTTGGTATTAGGCGCTATCAAGCAACCAATT
TCTCCAACCTAATCTAGATTTGGAATCTAGGAAAATGTTGAGAAAAAAAA
TAGTGCTTCATTGTGCCTTTGTTTCATTTTTTTTGTAATTCTAACATTTC
TTTTCTGATAGTTCACACCCCTCTTATTCTGACAGAAATCTATTTTGTCG
AAATTCCAAGTATTTAAACATTTATAATTTATAAGACAGGAAACAGAAAC
TTTTACCATATTTTCCACAATTTTTTAAAAGCTCTTTCGTGATCTTTGAA
GACAGTAGTACCCACAAGGTACTAACTGCAAATTCCAAAAATGAAATATG
ACCCACCACGGTACTAACCGTCATGATGTCTGGTACCAACTGCATGACCC
CTCCCCCTGGAAAAAATGTTAAATGCCAAACAGCTCTAGAATGGTTGGAG
ACGTTTAACTAAACGTATTTGCTATTCTTCTTCTCTTTTCATAAATCCTT
GGCTTGTATTCTGTTTCATCTCCAACAAATCATTTGATATCTTTAACTCC
ATCAAACTTCTATATCAATACAATTTGCAACTGGATGATTGGTGACCTCA
TTGGAATTGCTGTAATGTACAATGTTATCATTTCTCTATTTTAATTGATA
TTTTACTGCAAACGATTTCAAACTTTTATTGGACCTTTTTACTCATCATT
TGACAAATGAATTGCTATTTTTTGCTTGTATTTTGATAATGATCTAATCC
CTAACTTTTTAAACATTGTCAACTCTATCCATTAACTATATCCAACTGTG
TGAAATATGTGGTATTATGTTCATCACATAATGTTCAATCCAATCAAACA
ATGACGTCACATCCTTTATTATTTCCACTGGAACCCAAACTAAATCTACG
CTATATATACAAAAATTTGGTTCCACCATGCATTATCGCCACACTTATTA
CTTATTTTCTGTAAAACGTGGAGATTATAAGCGGTCGAGAAGCAGCGAAA
AATGAAGAGACAAGTTCCCATCGTCGTAACAGTGCAAGTAGCAAGACGAA
GGATCGTATCGAACAGTTGAAACGTTTGCTACAAGAAGATACAAACAAAA
ATTCCTCAAGGTAAGATTGATTCCGCATCTCACTTCATCCTTAGAAAATG
AGATGCTAAACAAACATTTGCTCTTTTTCGAACCTCAAAGACTGCCCTCG
TCCTGCCAGATACTAATTTTTACCTCGAAAGAGGTCCTCTAGGAAAAAAG
TGTAGTAACTATTTCTTAAGACATATGATTCTGAACTGGGATTTAAACTA
GAACACTAAATTTTGTTTAAATCGTTTGTGTGCTAAAGGGACAGGAAATT
TTTTTTGAGCTACAGAGCTTCGCACTATGATTATAAAACTTTTCGGTATT
GAGCAATACCATATAATTTGCATCCTTCCTAAATCTAATAATGTTGCGGA
AATCTGTTCATCCTGTAATAAGGTTTTTGACGTTAATAATTCATCCAAAA
AAATCATGAAATTGAAAAATCCTTAAAAAATTGCACTGTCAGGTGAATAA
TTCTCATTTTCCCTTTAGTAATAGTCGTTTACCCTTAATGATAATTATTC
GATTTGTTAATGTCAAATAGTTTAATGAATCTTATTTCTTATTTTCCCCT
TTTAAGGATTGTATTTTAACTGTTTATTCTCGAACATTTCAAACACCCTT
TTGAAGCAGTTTTTTTAAGCTTTTTATTTCCGTTAAAGCAAGAAAGAAAG
TTTGCGACCATATGATGTTTGTCCTTTTTCAGTCTCTTAGGCCAGGGGCC
GCGACTTATTTTAAGGTTATTAAACAGAATTTTGGCTTGATTAGTAAATT
TTTTTTTGATTTGAAAAAATGTGGTTGGGCCAAGGCCCGACTGGCCCCCC
GGTGTCGCGACGCCTGTAGGCTAAGTAGTACTATTTTTTACCGGTTCCCC
GAGTGTACTCCTTATCGGTATTCAGCTGTATAGAGTTATTTGATTGTGAT
TATTAATATTTTTATATAATGCATGAGACATGTTCTCGATCCTAACTTAA
CGAATCTGTTCGGAAGAAACCCTTGCTTACGTTCAACGGCGCTACATCAA
AATCCGCGACGAAAAGTAAATCTACCCCTCTTAATGTGGGTACCCCTTTT
CTGAAAAATTCGATGAAGAAATAGGTGGATATAGCTTAGTGCAAGGTTTT
ATAGAGGTCAGTGATTATCACATTTTGTTTTCTTCTTCTTAGCTCTTCTT
CAACTTCTTCTTCATCCTCTTCGTCATCGGAAAGTGAAAGTGAAAGTAAT
TCATCATCGGGCGAGGACTGGATCGAGAAAACAAACTCAAAGTCAAGAAA
AAGAGTATCTGATCGCAAACGTAGGAGTCATCACAAACATTATTCATCAA
AATCGAGAAAGAATCGTAAACGGTCGAGAAAATCTTCGAGTCAATCTCCA
GAGAGACATTCTCGCAAGAACCTATACGAGACTTCAGAAACAAGTCGTAA
AGAAAGAGATTTTAAGTCAACTCACGAGCCTGGTGGAGCTTCAAATTTGT
TAGACAATAATGCTTTAGATAAGGATGCGAAACAGATTTTACGAAAACTT
AAAGACTTTTCTTCCGAGGAAATCGATATTGTTAAGAAAATGTTACGGAA
AAACGAATCGGCAGAAAATACTTCGAAGGATGATCGAAAAGTTGAAGAAA
AATCGAAGGGCTATCGAGAAAGTAGACATTCACCGAGAAATTACCGTGAT
ACTGAAAAATCAACAAGAGATTATCGATCTTCTTTGTATTCTAGTCGAAA
TCGAGACGATTTGAGGAGAAACGAAGATCGATATGATCGAAAAGATGACT
ACAGACATTCCAAACGAGAGAAATATTCGAAACAATCGAGCTATGATCAA
AGGGATTAATCATTCTTTAGGACATTTTCTTTTATAGCGTAATTTTTCAT
ACACAAATGTATTTGAAAACTCAATTCTTGTCAGTAATAGATACTCGGTA
ATACATATGGATCTATAATTTTATTGGGATGATTAGATGAACAGGCTGGG
CAAGATCTTTACCGATCCAATGACAGCTCTGTTTGTTATTCTGTCAGTTT
TTAAGGAGAGTAGAAATGTGTGCGTCAGAATAATTTCGCCAAAAAAATAA
TGTTCAATAGCAGGCGATGGGACTATGTGGTGAAAAGAGTTGACCTACTA
TACTATCATGTCCCACTCGATTTTTGAAGTCTTTTCTTCGTATTAATGTG
TATATTTCATCCTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038061XLOC_038061Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060509-exon-scaffold_343-1575043694:169623..169797TCONS_00060509-exon-scaffold_343-1575043694:169623..169797Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:169357..169479TCONS_00060509-exon-scaffold_343-1575043694:169357..169479Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:169084..169156TCONS_00060509-exon-scaffold_343-1575043694:169084..169156Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:168632..168726TCONS_00060509-exon-scaffold_343-1575043694:168632..168726Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:168082..168113TCONS_00060509-exon-scaffold_343-1575043694:168082..168113Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:167685..167834TCONS_00060509-exon-scaffold_343-1575043694:167685..167834Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:167304..167375TCONS_00060509-exon-scaffold_343-1575043694:167304..167375Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:166756..166875TCONS_00060509-exon-scaffold_343-1575043694:166756..166875Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:166226..166348TCONS_00060509-exon-scaffold_343-1575043694:166226..166348Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:163988..165266TCONS_00060509-exon-scaffold_343-1575043694:163988..165266Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1575043694:161831..162855TCONS_00060509-exon-scaffold_343-1575043694:161831..162855Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:169623..169797TCONS_00060509-exon-scaffold_343-1510915933:169623..169797Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:169357..169479TCONS_00060509-exon-scaffold_343-1510915933:169357..169479Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:169084..169156TCONS_00060509-exon-scaffold_343-1510915933:169084..169156Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:168632..168726TCONS_00060509-exon-scaffold_343-1510915933:168632..168726Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:168082..168113TCONS_00060509-exon-scaffold_343-1510915933:168082..168113Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:167685..167834TCONS_00060509-exon-scaffold_343-1510915933:167685..167834Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:167304..167375TCONS_00060509-exon-scaffold_343-1510915933:167304..167375Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:166756..166875TCONS_00060509-exon-scaffold_343-1510915933:166756..166875Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:166226..166348TCONS_00060509-exon-scaffold_343-1510915933:166226..166348Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:163988..165266TCONS_00060509-exon-scaffold_343-1510915933:163988..165266Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1510915933:161831..162855TCONS_00060509-exon-scaffold_343-1510915933:161831..162855Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:169623..169797TCONS_00060509-exon-scaffold_343-1491911889:169623..169797Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:169357..169479TCONS_00060509-exon-scaffold_343-1491911889:169357..169479Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:169084..169156TCONS_00060509-exon-scaffold_343-1491911889:169084..169156Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:168632..168726TCONS_00060509-exon-scaffold_343-1491911889:168632..168726Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:168082..168113TCONS_00060509-exon-scaffold_343-1491911889:168082..168113Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:167685..167834TCONS_00060509-exon-scaffold_343-1491911889:167685..167834Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:167304..167375TCONS_00060509-exon-scaffold_343-1491911889:167304..167375Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:166756..166875TCONS_00060509-exon-scaffold_343-1491911889:166756..166875Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:166226..166348TCONS_00060509-exon-scaffold_343-1491911889:166226..166348Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:163988..165266TCONS_00060509-exon-scaffold_343-1491911889:163988..165266Clytia hemisphaericaexon
TCONS_00060509-exon-scaffold_343-1491911889:161831..162855TCONS_00060509-exon-scaffold_343-1491911889:161831..162855Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_343supercontigscaffold_343:161831..169797 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0108785	0.00238484	0.210954	0.242121	0.0521035	0.362869	0.0334478	0.710324	0.438741	0.726716	1.40064e-06	0.107126	0.473499	1.36867	0.000664684	1.30863	0.000307154	0.425643	1.29797	6.74298e-07	0.0591162	0.516344	0.000391471	1.93805e-05	0.444391	0.626982	0.330636	0.326113	0.152164	0
Blast
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BLAST of TCONS_00060509 vs. Swiss-Prot (Human)
Match: TTC14 (Tetratricopeptide repeat protein 14 OS=Homo sapiens GN=TTC14 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.635e-29
Identity = 98/332 (29.52%), Postives = 169/332 (50.90%), Query Frame = 2 
Query:  110 PPICLEQFMQCPSNFRKQTFFENLKINNVIIGKLAVCSASGWTVKLLGVMEGQKRWIKDLQITA----RLVITKSXXXXXXXXXXXGDLVKALVEKVDVQSKDIWLTLEPSVAAKSQYQLPKLGKIQDPDTVEYLLESREFDEENDSAYLEHIRDSSL-FNHPHGVSLLASHFNVNQDHHGFVV----CNTLKIKETALELREKQMLDWSMSMVGIGVKHFREKNLKEAKKCLDKALSFYPKNVEGFVARGALKANQSDLKGAIDDFRKALEVNPHHRNGKKYLIETSLSLARSHEKEKRWKESSKCYHEIMKHDPDHKEAKERYHQIHQIL 1078
            PP  LEQFM+ PS  R++ FF +++  +++IG+++     G+ + L+ +  G  R I  L+ITA    R V + S   D    Y+ GD+++A ++ +D   + + ++L  S        + KLG I   +   Y   S E +  +  +Y E++  SSL F +P  V  L     +++ +   ++           + A  LR+KQ   W++  V IGV +F+     +A    +KAL    +NVE  VARGAL A +  L  AI+DF  ALE  P HRN +KYL +T +      E+E+++  +   Y + +  D   K+A++   ++H+ +
Sbjct:  102 PP--LEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSSSLPPHLSGI-KLGVISSEELPLYYRRSVELNSNSLESY-ENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAEDALQKLHKYM 429
The following BLAST results are available for this feature:
BLAST of TCONS_00060509 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC143.635e-2929.52Tetratricopeptide repeat protein 14 OS=Homo sapien... [more]
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