TCONS_00060508 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060508
Unique NameTCONS_00060508
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2247

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060508 ID=TCONS_00060508|Name=TCONS_00060508|organism=Clytia hemisphaerica|type=transcript|length=2247bp
ACAAagtagcaaaattttcaaaattgttgtgTGAAGCTGGCACCAGAGAG
ATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCATTTAACAACAT
TGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATGTCCTTCAAATT
TTCGGaaacaaacattttttgagaatttgaaaatcaacaaTGTCATCATT
GGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGACCGTTAAACTGCTAGG
CGTCATGGAAGGTCAGAAAAGATGGATAAAAGATTTGCAAATCACGGCAC
GATTGGTGATCACAAagtcttatgatgatgatgttgATGAAGATTATGAA
GTTGGAGATCTTGTCAAAGCGCTTGTGGAGAAAGTTGATGTACAATCCAA
AGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAAATCCCAATACC
AATTGCCTAAGCTGGGCAAAATTCAGGACCCAGATACCGTTGAGTATCTT
TTGGAAAGCCGTgaatttgatgaagaaaatgACTCAGCATATTTGGAACA
CATACGCGATAGTTCACTTTTCAATCATCCACACGGTGTTTCATTACTGG
CAAGTCATTTTAATGTCAACCAAGACCATCATGGGTTTGTTGTATGTAAC
ACGCTTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAGAAACAAATGCT
TGATTGGTCAATGAGCATGGTTGGGATTGGTGTGAAACATTTTCGTGAGA
AGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTCTCAGCTTTTAT
CCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTGAAAGCTAATCA
AAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGCGTTAGAAGTCA
ATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAACTTCACTCTCC
TTAGCACGAAGTCACGAGAAAGAGAAGCGTTGGAAAGAAAGTTCAAAGTG
TTATCACGAGATTATGAAACATGATCCAGATCATAAAGAAGCAAAAGAAA
GATATCATCAAATTCATCAAATACTGTCTTCTAAGATTATAAGCGGTCGA
GAAGCAGCGAAAAATGAAGAGACAAGTTCCCATCGTCGTAACAGTGCAAG
TAGCAAGACGAAGGATCGTATCGAACAGTTGAAACGTTTGCTACAAGAAG
ATACAAACAAAAATTCCTCAAGCTCTTCTTCAACTTCTTCTTCATCCTCT
TCGTCATcggaaagtgaaagtgaaagtaattcATCATCGGGCGAGGACTG
GATCGAGAAAACAAACTCAAAGTCAAGAAAAAGAGTATCTGATCGCAAAC
GTAGGAGTCATCACAAACATTATTCATCAAAATCGAGAAAGAATCGTAAA
CGGTCGAGAAAATCTTCGAGTCAATCTCCAGAGAGACATTCTCGCAAGAA
CCTATACGAGACTTCAGAAACAAGTCGTAAAGAAAGAGATTTTAAGTCAA
CTCACGAGCCTGGTGGAGCTTCAAATTTGTTAGACAATAATGCTTTAGAT
AAGGATGCGAAACAGATTTTACGAAAACTTAAAGACTTTTCTTCCGAGGA
AATCGATATTGTTAAGAAAATGTTACGGAAAAACGAATCGGCAGAAAATA
CTTCGAAGGATGATcgaaaagttgaagaaaaatcGAAGGGCTATCGAGAA
AGTAGACATTCACCGAGAAATTACCGTGATACTGAAAAATCAACAAGAGA
TTATCGATCTTCTTTGTATTCTAGTCGAAATCGAGACGATTTGAGGAGAA
ACGAAGATCGATATGATCGAAAAGATGACTACAGACATTCCAAACGAGAG
AAATATTCGAAACAATCGAGCTATGATCAAAGGGATTAATCATTCTTTAG
GACATTTTCTTTTATAGCGTAATTTTTCATACACAAAtgtatttgaaaac
tcaattctTGTCAGTAATAGATACTCGGTAATACATATGGATCTATAATT
TTATTGGGATGATTAGATGAACAGGCTGGGCAAGATCTTTACCGATCCAA
TGACAGCTCTGTTTGTTATTCTGTCAGTTTTTAAGGAGAGTAGAAATGTG
TGCGTCAGAATAATTTCGCCAAAAAAATAATGTTCAATAGCAGGCGATGG
GACTATGTGGTGAAAAGAGTTGACCTACTATACTATCATGTCCCACtcga
tttttgaagtctttTCTTCGTATTAATGTGTATATTTCATCCTTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_343:161831..169795-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060508 ID=TCONS_00060508|Name=TCONS_00060508|organism=Clytia hemisphaerica|type=transcript|length=7965bp|location=Sequence derived from alignment at scaffold_343:161831..169795- (Clytia hemisphaerica)
ACAAAGTAGCAAAATTTTCAAAATTGTTGTGTGAAGCTGGCACCAGAGAG
ATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCATTTAACAACAT
TGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATGTCCTTCAAATT
TTCGGAAACAAACATTTTTTGAGGTTTGTGCTCTTTCTTCAAAGTTATCA
TTTTTATACAGTGACTTACAAATTGTATTGCTCACGGTCCACTTGTCTCT
TCTTATACTTTTCTCAGCGAAATGTTTGTAATAATTCTTCAATTTACTGC
CCATTGCTTTTTATAGAATTTGAAAATCAACAATGTCATCATTGGAAAGT
TAGCTGTATGTTCTGCCAGTGGATGGACCGTTAAACTGCTAGGCGTCATG
GAAGGTCAGAAAAGATGGATAAAAGATTTGCAAATCACGGTAAAGTAAAG
TCTTTCCTCATTCTCCGTTGGATCTTTTAAATGAATTTTGAATCTTTCCA
GGGCTTTTATTTTTGTACATCCTAAATAAAATTTGTAAAAGGTTGAACCT
AAATTCAGAGCTTTACGATGCTTTTAGCAAATAGAAAACGTTATTGATCT
ACTCAGAAGATGTTTCAAATTTAATTTGTTATTTTCCAGGCACGATTGGT
GATCACAAAGTCTTATGATGATGATGTTGATGAAGATTATGAAGTTGGAG
ATCTTGTCAAAGGTTTGTCTTTTAAAGATAATAAATCAAAGTTATGGATT
TGTACGGATAAGCCATGAAAAATATTGAATGATTTTCAAAAGAACTAAAA
CACTTACATGGATCCACCGAATACCTTTATTCTTAAAGAACGTCACTTAA
TATGAATTCAATTTGTATTATTTACTGTACTAATATAATGAACTTGGGCT
AGAAGTTTACTTGAACTACAAAAAAGTTTTAAAGTTGCACATTCCATACA
ATTACACATTGATCAATGATATCAACTGCATATATTTGTTCCATATGTTT
TCATAAAGCTAACAACTCCAATGTTGTATTGAAAACCAAGCTGATGCTAA
TAATATCTTGTTTTTTCAGCGCTTGTGGAGAAAGTTGATGTACAATCCAA
AGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAAATCCCAATACC
AATTGCCTAAGCTGGTAAAAGTCATCGTTATTATTTCCGTGTTTAGGTCC
CCAATGACGTTACAGAATGTCAAAACAACGTCCATAACATTTTTAAAACA
TTAGATGAACGTTGAAACGATGCTCTGTGCGAGCTGGGGAGCTGGGGATT
CACCAAATGGCTAACTCGCAGATTTCAAAAAAGCCCGAAGGGGTTGATAG
AGTGCTTTGGCTGAAAAGTGTGATCACGTGACGTTACAATAAAATTTCAG
CGCTTGATCAATCAGAAGCTTCGCGGGTTTTCGAAAACAATAGCAGCAAT
ACTTTTTCCAATATTCACTTTTTTTTGCTTGGAAAAGCTTAAAGCACGCC
ATCTAGCCCTTCGGGCTTTACAATATACAAAAATCTTTGGGCTAACCCTC
TTAGTAATAATAACTGTATCCTTTTTGTTACTAAGCTCTGTTGCATTATT
CTGTTAAGTAGCAGGATCGTTTAACTGAGGTAGTCCTTTTGTTTCTTTTA
ATAAGCTGGGAATATTGTTTTTGTTTTCACAGGGCAAAATTCAGGACCCA
GATACCGTTGAGTAGTAAGTTAACATTCTTTTACAGTAATACAGATAACT
GACTTTACTCTCCCATTTTTTACTCTTTAAAATCTGATCGTGTTTTTTTT
CTTTAACTTTCTCAAAAGTATTTCTCTTTTTAACTATATTAACCCTCTTG
AAAAACAATTCCTTATCGGTGCTCTCAAAGATTTTTAACTGACACTGCAT
AAATGTTTCTTCAGAACATTTTTCGAACAGTTTTTAACTCGTGATCTTTC
TTTACTTGCAGTCTTTTGGAAAGCCGTGAATTTGATGAAGAAAATGACTC
AGCATATTTGGAACACATACGCGATAGTTCACTTTTCAATCATCCACACG
GTGTTTCATTACTGGCAAGTCATTTTAATGTCAACCAAGACCATCATGGG
TTTGTTGTATGGTAAGTCTAATATTGATTTGTTGGAGACAAAATTTACTC
CTAACTTTACATTTAAACCACTTCCCGAATTTTGAAATATAACTTGTGTA
AAGTACCTTTTAAATTTCATTGTTGATGTTTTTTTGTTCACCTTATCGGC
CCTTTTTACGCTGGCCCTAATTTAACGCCGGCCCTTATTACGCCACGAGC
CCAAAAATAACGCCAATAAAGGCCGGTGTAAAAAGGGCCGATAAGGTAGT
TTACATTTTATCTCCATTACTTTCAATCATTGGCTCTCAATAACAAACTA
ATATACTTTTTCCATCGCAGTAACACGCTTAAGATTAAAGAAACGGCTCT
TGAGCTTCGAGAGAAACAAATGCTTGATTGGTCAATGAGCATGTAAGTAG
TCACGTGATAATAACCACATTACGAATAAAATTGTCTTCAGTGTTGCAGA
GTCACGCTGATTTTTCGTCTTAGTCGAGGTAACACCCAGTAAAATTGACC
TTTTCATAAATTACGTCACGAACATCATACTTGCCTCGTTTTGAAATTAT
TGCCAAGGTGATCTACTCCCAGTGGATTTTATTAAAACTACTTTCTATTT
ATAAAAAAATAATTTAATGTCTCAAGGGACATAGTCTCCATTGTAATTGT
TTGAATACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAGGTCTAT
GCAAATTGATTTCTTTTTTGAGTTCACAAGTTGGAAAATAGTTACTGAAA
GTTTCACTGAAAGTTCGAAACTTTCAATGTATTTTAAACTTTTTAAAACT
TTTGATTATGTGTGTTTCAGGGTTGGGATTGGTGTGAAACATTTTCGTGA
GAAGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTCTCAGCTTTT
ATCCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTGTAAGTCAAA
TCCTGCGGCACATTTTAAACTCGCAGTTTATAAAATGAGGCTATATTTTT
GCTGTTTTGAGTTAGACATTAGTCTTAAAGATGGCTAATCCATGACCTAG
AAATATAGACAAGGCCTTTTAAAAATTCAAAATATAAAGCCACCATTAGT
TAACGTTGTTTTTGAATACATGAATGGTACGTTCTAGAATGATTTTACAA
ATATCCGAGATCTTTTTTCATTATCAGAACAAAACAAATATTAGCGAACA
ATTGCAACGAACACTACAAACATGTATGATATCCCTCCCCGCTAGGATCT
TTAAAGTTATACCACCAGAGGTACTAGACTATGTAGAAAGAAAAGAAACA
AAAATGTTATGAAAATGAATGTTAAATCCGAGATCTATATCTTTTAGGAA
AGCTAATCAAAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGCGT
TAGAAGTCAATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAACT
TCACTCTCCTTAGCACGAAGGTAATAGTATTGTCATGTTGATATGCTCTT
CTGCCACGCATTCTTTTTTTATGAATAGTTTTTTTTTGCTGAGGGTTAAG
TATTCTCAGGAATCTTGCCTAAACTGAGGGTGAGATATTCTTAGTATTAG
TATATCTTTCGAATGTCGTTCTTTAAAGTCATTTAAAAACAAACGCAAAG
AAGTGATGACCTTATTATATGAAAATAGACAAAAGAAAAAAGTTGGGAAT
CGGGACTTAATGTCATGGCTTACATAAAAAGCTTAAGAAAGATTTCATCA
AATACCATAATCAAATACGTCATGCACAATTGACAACGTCATTCTCATTA
AGTATCACGCCCTGGTAGATTAATGCCGTACACCTTTTTGAAATCAAAAA
AGATTGAAGCGAGCTTAAACTAATTACGGTTAGTTATAAAGCCCAATTGG
AAATGGGGACAAGCCCTAAAAACTAAGACAAATTTTGTATGAATTTTTTA
CCAATCTAAAAAGTAAAGCACCTAACCATGCAAACGCACCTATGAGGTAG
TCTTGTAAAATGAGACGATTAAAAAGAATCCGGCTGGATAAAGCTTCGTG
ACTGGTGGTAGAACAAATGTTTGTTATTTGTAATGCAGGTCAGGTTCTAT
ATACAAAATGATATACAATATATTATATACAATAGATCTTATCGGAGTTT
TTGATTTTTCTAAAAAAGTGATGTTTTGGGAGTATTACAATAGAAATCTC
TTAGGAATTCCTCGAGGGAATTCTATTGTAATACTCCCGAAACAATCCCA
CAAAGAATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGATCTATTTC
ATGTATATTGGCAGTAAAAACTGTTAGGTCAATAATGAGAATCAAACGAC
GGGTGATTAAAACAATCCCCAAATGGTTCGTTGTATCATCACTAAGTCTG
ATTAAAAACAGTTTTTCTAATCCTTACAGTCACGAGAAAGAGAAGCGTTG
GAAAGAAAGTTCAAAGTGTTATCACGAGATTATGAAACATGATCCAGATC
ATAAAGAAGCAAAAGAAAGATATCATCAAATTCATCAAATACTGTCTTCT
AAGGTAACCGCTATCCATATCTTAATGGTGTCACGTGACTTAATTCTGTA
TGTCAAGTTTGTTTTGTTTTGGTATTAGGCGCTATCAAGCAACCAATTTC
TCCAACCTAATCTAGATTTGGAATCTAGGAAAATGTTGAGAAAAAAAATA
GTGCTTCATTGTGCCTTTGTTTCATTTTTTTTGTAATTCTAACATTTCTT
TTCTGATAGTTCACACCCCTCTTATTCTGACAGAAATCTATTTTGTCGAA
ATTCCAAGTATTTAAACATTTATAATTTATAAGACAGGAAACAGAAACTT
TTACCATATTTTCCACAATTTTTTAAAAGCTCTTTCGTGATCTTTGAAGA
CAGTAGTACCCACAAGGTACTAACTGCAAATTCCAAAAATGAAATATGAC
CCACCACGGTACTAACCGTCATGATGTCTGGTACCAACTGCATGACCCCT
CCCCCTGGAAAAAATGTTAAATGCCAAACAGCTCTAGAATGGTTGGAGAC
GTTTAACTAAACGTATTTGCTATTCTTCTTCTCTTTTCATAAATCCTTGG
CTTGTATTCTGTTTCATCTCCAACAAATCATTTGATATCTTTAACTCCAT
CAAACTTCTATATCAATACAATTTGCAACTGGATGATTGGTGACCTCATT
GGAATTGCTGTAATGTACAATGTTATCATTTCTCTATTTTAATTGATATT
TTACTGCAAACGATTTCAAACTTTTATTGGACCTTTTTACTCATCATTTG
ACAAATGAATTGCTATTTTTTGCTTGTATTTTGATAATGATCTAATCCCT
AACTTTTTAAACATTGTCAACTCTATCCATTAACTATATCCAACTGTGTG
AAATATGTGGTATTATGTTCATCACATAATGTTCAATCCAATCAAACAAT
GACGTCACATCCTTTATTATTTCCACTGGAACCCAAACTAAATCTACGCT
ATATATACAAAAATTTGGTTCCACCATGCATTATCGCCACACTTATTACT
TATTTTCTGTAAAACGTGGAGATTATAAGCGGTCGAGAAGCAGCGAAAAA
TGAAGAGACAAGTTCCCATCGTCGTAACAGTGCAAGTAGCAAGACGAAGG
ATCGTATCGAACAGTTGAAACGTTTGCTACAAGAAGATACAAACAAAAAT
TCCTCAAGGTAAGATTGATTCCGCATCTCACTTCATCCTTAGAAAATGAG
ATGCTAAACAAACATTTGCTCTTTTTCGAACCTCAAAGACTGCCCTCGTC
CTGCCAGATACTAATTTTTACCTCGAAAGAGGTCCTCTAGGAAAAAAGTG
TAGTAACTATTTCTTAAGACATATGATTCTGAACTGGGATTTAAACTAGA
ACACTAAATTTTGTTTAAATCGTTTGTGTGCTAAAGGGACAGGAAATTTT
TTTTGAGCTACAGAGCTTCGCACTATGATTATAAAACTTTTCGGTATTGA
GCAATACCATATAATTTGCATCCTTCCTAAATCTAATAATGTTGCGGAAA
TCTGTTCATCCTGTAATAAGGTTTTTGACGTTAATAATTCATCCAAAAAA
ATCATGAAATTGAAAAATCCTTAAAAAATTGCACTGTCAGGTGAATAATT
CTCATTTTCCCTTTAGTAATAGTCGTTTACCCTTAATGATAATTATTCGA
TTTGTTAATGTCAAATAGTTTAATGAATCTTATTTCTTATTTTCCCCTTT
TAAGGATTGTATTTTAACTGTTTATTCTCGAACATTTCAAACACCCTTTT
GAAGCAGTTTTTTTAAGCTTTTTATTTCCGTTAAAGCAAGAAAGAAAGTT
TGCGACCATATGATGTTTGTCCTTTTTCAGTCTCTTAGGCCAGGGGCCGC
GACTTATTTTAAGGTTATTAAACAGAATTTTGGCTTGATTAGTAAATTTT
TTTTTGATTTGAAAAAATGTGGTTGGGCCAAGGCCCGACTGGCCCCCCGG
TGTCGCGACGCCTGTAGGCTAAGTAGTACTATTTTTTACCGGTTCCCCGA
GTGTACTCCTTATCGGTATTCAGCTGTATAGAGTTATTTGATTGTGATTA
TTAATATTTTTATATAATGCATGAGACATGTTCTCGATCCTAACTTAACG
AATCTGTTCGGAAGAAACCCTTGCTTACGTTCAACGGCGCTACATCAAAA
TCCGCGACGAAAAGTAAATCTACCCCTCTTAATGTGGGTACCCCTTTTCT
GAAAAATTCGATGAAGAAATAGGTGGATATAGCTTAGTGCAAGGTTTTAT
AGAGGTCAGTGATTATCACATTTTGTTTTCTTCTTCTTAGCTCTTCTTCA
ACTTCTTCTTCATCCTCTTCGTCATCGGAAAGTGAAAGTGAAAGTAATTC
ATCATCGGGCGAGGACTGGATCGAGAAAACAAACTCAAAGTCAAGAAAAA
GAGTATCTGATCGCAAACGTAGGAGTCATCACAAACATTATTCATCAAAA
TCGAGAAAGAATCGTAAACGGTCGAGAAAATCTTCGAGTCAATCTCCAGA
GAGACATTCTCGCAAGAACCTATACGAGACTTCAGAAACAAGTCGTAAAG
AAAGAGATTTTAAGTCAACTCACGAGCCTGGTGGAGCTTCAAATTTGTTA
GACAATAATGCTTTAGATAAGGATGCGAAACAGATTTTACGAAAACTTAA
AGACTTTTCTTCCGAGGAAATCGATATTGTTAAGAAAATGTTACGGAAAA
ACGAATCGGCAGAAAATACTTCGAAGGATGATCGAAAAGTTGAAGAAAAA
TCGAAGGGCTATCGAGAAAGTAGACATTCACCGAGAAATTACCGTGATAC
TGAAAAATCAACAAGAGATTATCGATCTTCTTTGTATTCTAGTCGAAATC
GAGACGATTTGAGGAGAAACGAAGATCGATATGATCGAAAAGATGACTAC
AGACATTCCAAACGAGAGAAATATTCGAAACAATCGAGCTATGATCAAAG
GGATTAATCATTCTTTAGGACATTTTCTTTTATAGCGTAATTTTTCATAC
ACAAATGTATTTGAAAACTCAATTCTTGTCAGTAATAGATACTCGGTAAT
ACATATGGATCTATAATTTTATTGGGATGATTAGATGAACAGGCTGGGCA
AGATCTTTACCGATCCAATGACAGCTCTGTTTGTTATTCTGTCAGTTTTT
AAGGAGAGTAGAAATGTGTGCGTCAGAATAATTTCGCCAAAAAAATAATG
TTCAATAGCAGGCGATGGGACTATGTGGTGAAAAGAGTTGACCTACTATA
CTATCATGTCCCACTCGATTTTTGAAGTCTTTTCTTCGTATTAATGTGTA
TATTTCATCCTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038061XLOC_038061Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060508-exon-scaffold_343-1575043694:169623..169795TCONS_00060508-exon-scaffold_343-1575043694:169623..169795Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:169357..169479TCONS_00060508-exon-scaffold_343-1575043694:169357..169479Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:169084..169156TCONS_00060508-exon-scaffold_343-1575043694:169084..169156Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:168632..168726TCONS_00060508-exon-scaffold_343-1575043694:168632..168726Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:168082..168113TCONS_00060508-exon-scaffold_343-1575043694:168082..168113Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:167685..167834TCONS_00060508-exon-scaffold_343-1575043694:167685..167834Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:167304..167375TCONS_00060508-exon-scaffold_343-1575043694:167304..167375Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:166756..166875TCONS_00060508-exon-scaffold_343-1575043694:166756..166875Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:166226..166348TCONS_00060508-exon-scaffold_343-1575043694:166226..166348Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:165143..165266TCONS_00060508-exon-scaffold_343-1575043694:165143..165266Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:163988..164124TCONS_00060508-exon-scaffold_343-1575043694:163988..164124Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1575043694:161831..162855TCONS_00060508-exon-scaffold_343-1575043694:161831..162855Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:169623..169795TCONS_00060508-exon-scaffold_343-1510915933:169623..169795Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:169357..169479TCONS_00060508-exon-scaffold_343-1510915933:169357..169479Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:169084..169156TCONS_00060508-exon-scaffold_343-1510915933:169084..169156Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:168632..168726TCONS_00060508-exon-scaffold_343-1510915933:168632..168726Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:168082..168113TCONS_00060508-exon-scaffold_343-1510915933:168082..168113Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:167685..167834TCONS_00060508-exon-scaffold_343-1510915933:167685..167834Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:167304..167375TCONS_00060508-exon-scaffold_343-1510915933:167304..167375Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:166756..166875TCONS_00060508-exon-scaffold_343-1510915933:166756..166875Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:166226..166348TCONS_00060508-exon-scaffold_343-1510915933:166226..166348Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:165143..165266TCONS_00060508-exon-scaffold_343-1510915933:165143..165266Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:163988..164124TCONS_00060508-exon-scaffold_343-1510915933:163988..164124Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1510915933:161831..162855TCONS_00060508-exon-scaffold_343-1510915933:161831..162855Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:169623..169795TCONS_00060508-exon-scaffold_343-1491911889:169623..169795Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:169357..169479TCONS_00060508-exon-scaffold_343-1491911889:169357..169479Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:169084..169156TCONS_00060508-exon-scaffold_343-1491911889:169084..169156Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:168632..168726TCONS_00060508-exon-scaffold_343-1491911889:168632..168726Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:168082..168113TCONS_00060508-exon-scaffold_343-1491911889:168082..168113Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:167685..167834TCONS_00060508-exon-scaffold_343-1491911889:167685..167834Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:167304..167375TCONS_00060508-exon-scaffold_343-1491911889:167304..167375Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:166756..166875TCONS_00060508-exon-scaffold_343-1491911889:166756..166875Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:166226..166348TCONS_00060508-exon-scaffold_343-1491911889:166226..166348Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:165143..165266TCONS_00060508-exon-scaffold_343-1491911889:165143..165266Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:163988..164124TCONS_00060508-exon-scaffold_343-1491911889:163988..164124Clytia hemisphaericaexon
TCONS_00060508-exon-scaffold_343-1491911889:161831..162855TCONS_00060508-exon-scaffold_343-1491911889:161831..162855Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_343supercontigscaffold_343:161831..169795 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00286891	7.87642e-06	0.6401	0.636578	0.106992	3.7142	0.0870867	7.0993	1.44842	0.0882644	1.9102e-08	0.231562	1.84804	0.239262	1.15348e-05	2.00386	6.76934e-05	2.90613	2.36137	7.36805e-09	0.00493435	1.47151	2.55744e-05	1.8241e-07	7.04812	5.63319	0.993067	1.18076	1.79987	0
Blast
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BLAST of TCONS_00060508 vs. Swiss-Prot (Human)
Match: TTC14 (Tetratricopeptide repeat protein 14 OS=Homo sapiens GN=TTC14 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 7.053e-31
Identity = 98/332 (29.52%), Postives = 169/332 (50.90%), Query Frame = 3 
Query:  108 PPICLEQFMQCPSNFRKQTFFENLKINNVIIGKLAVCSASGWTVKLLGVMEGQKRWIKDLQITA----RLVITKSXXXXXXXXXXXGDLVKALVEKVDVQSKDIWLTLEPSVAAKSQYQLPKLGKIQDPDTVEYLLESREFDEENDSAYLEHIRDSSL-FNHPHGVSLLASHFNVNQDHHGFVV----CNTLKIKETALELREKQMLDWSMSMVGIGVKHFREKNLKEAKKCLDKALSFYPKNVEGFVARGALKANQSDLKGAIDDFRKALEVNPHHRNGKKYLIETSLSLARSHEKEKRWKESSKCYHEIMKHDPDHKEAKERYHQIHQIL 1076
            PP  LEQFM+ PS  R++ FF +++  +++IG+++     G+ + L+ +  G  R I  L+ITA    R V + S   D    Y+ GD+++A ++ +D   + + ++L  S        + KLG I   +   Y   S E +  +  +Y E++  SSL F +P  V  L     +++ +   ++           + A  LR+KQ   W++  V IGV +F+     +A    +KAL    +NVE  VARGAL A +  L  AI+DF  ALE  P HRN +KYL +T +      E+E+++  +   Y + +  D   K+A++   ++H+ +
Sbjct:  102 PP--LEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSSSLPPHLSGI-KLGVISSEELPLYYRRSVELNSNSLESY-ENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAEDALQKLHKYM 429
The following BLAST results are available for this feature:
BLAST of TCONS_00060508 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC147.053e-3129.52Tetratricopeptide repeat protein 14 OS=Homo sapien... [more]
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