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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060490 ID=TCONS_00060490|Name=TCONS_00060490|organism=Clytia hemisphaerica|type=transcript|length=1693bp
TCGCAAAGTTGTTAAATATTGTGACTTTTTggtgtttcaaagaaaattac
GAAAGTTTAGCTTCAAATATCTTCGCAATCTTAAGGCTTAAGACTTTCTt
agccttataaaaggttgaacAAAGGTTCGAAGCTGCTTACTACCGTTATA
TTTCTAGTGTTTCGTTTTTCTTTGGttccaaaattctcaatttttgttAA
CAATGGCTTGTGCTGCTCTCAAGAGACCTCACAACTTTGATCTTCTTGGT
AACAGTCCTGATCATAAAGTCAGTGCATCTCCTAAAAGGAGAAGATGTGG
AGCTGTAGTTACATCTTGTTCGTCAACAAGTATTTCTCCTTTCCTTGAAG
CTACTCCAAAATTATGcaaagATGAGTTGGCCAAAAATGTACAAGATGAA
TGGAGAAGGATACAACGCCGTAGGAGATTGGCTTGtccctcatcacctca
aaacAATACATCCAACCTTCAGAGTCTTTTTGGATCCCCAACTTCCTTCA
ACACAGGATATTGGTCACCTCCTAGAGGTTCAATGTCACCATGTAGTAGT
TCCATGTCTCCCCCCAGAACCACCACTGAGCGTTCAGAACAGACCAGTTT
GAATGTCAAACAAGTCGTTTCGCTCTGTGAAAGATTGTGGAAAGAACGCG
AGGATAAACTTCGTGAAGAATATGACAAAGTTCTCAATGATAGACTGTCA
GAACAGTACGACTCCTTTTTGAAGTTCACTCAAGATCAAATAATGaggaa
atatcaaaattcatcATGTAGTTACGTTTCGTAACGTGCTTTGTCATCTG
GACGAATGAATTGTAAATATGTCATTTAAAAATTTGTATTTCCCTCATTA
TTATTAGTTTGAATAAGACATTGTTTCAAAGAACCTTATTAATTTTGGTA
TTTAGTACTTTAGAAAGCACTTTCATGTCTCAGAAAAGATCTGAAAGGAA
ctaaatttgagatttttgctcAGAATGAGGTGATGAGactgtaaaaaaac
tttcttgacatttttcaaatttgaagcCATTACTTAATGTCAAAATGGTG
CTAGgaatttattttgattgttcaTAGCAATTTTACTAcagtattttatt
tttgttccaattATTTCTATTATATTCAGTTGCTGTGGGAGATTGAGCCT
CTCTCCAAGCAAATTGGAGTTCCAGATGGAATTATTGACTTTCTGTATCA
TTTAGTTCCACTAATTTGTATCATAGTTTATGTTAggagattttattttt
gttccatttttcttcttttacttAAAAGCATATAGGTTAAATTTTGAACC
ACTTTTGATATGGTGAATTTTacttcaagaattttggaatgTATTCTTTT
CTGGGACAATTTCATTATATGTATACTTTCTATAAACTGCCTAACTAAAG
ACTCTTAAGGTTTTTTCGAAAAGATATTGAAGAAAAGAATTGCATCTTTC
TGTTGCTATTACCATAGTCGAAGCTTCCAAATTAGCAGTCTTCGAGACGG
AATGATTTCTTACTCAATTgtagtatatatttttgaatgcttgataaatt
ttagatttttagtgAGTTTAGTATATCCATcagttttattattatttcaa
tTACTATTACTGGAAATATGGCGTTCTACTGAATTTTAATATTGTATTAT
ATTATTTGTTcacaaaataaactttttttgagtATAAAAAACT Run BLAST on NCBI transcript from alignment at scaffold_343:91979..108035+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060490 ID=TCONS_00060490|Name=TCONS_00060490|organism=Clytia hemisphaerica|type=transcript|length=16057bp|location=Sequence derived from alignment at scaffold_343:91979..108035+ (Clytia hemisphaerica)
TCGCAAAGTTGTTAAATATTGTGACTTTTTggtgtttcaaagaaaattac
GAAAGTTTAGCTTCAAATATCTTCGCAATCTTAAGGCTTAAGACTTTCTt
agccttataaaaggttgaacAAAGGTTCGAAGCTGCTTACTACCGTTATA
TTTCTAGTGTTTCGTTTTTCTTTGGttccaaaattctcaatttttgttAA
CAATGGCTTGTGCTGCTCTCAAGAGACCTCACAACTTTGATCTTCTTGGT
AACAGTCCTGATCATAAAGTCAGTGCATCTCCTAAAAGGAGAAGATGTGG
AGCTGTAGTTACATCTTGTTCGTCAACAAGTATTTCTCCTTTCCTTGAAG
CTACTCCAAAATTATGcaaaggtaatttttttgcattgcttggaaatttg
attgaaagaaaatttatatGAATCATACTGTAATACTATTCTGATTTAAA
ACAGTTGAATATCAAGATGATTGAGTTTTCTCTGTTGAAAATAATTGCTT
TGATTTTTATTTGGAGCCATCTTCTTTAATAAGATATGTAATGCGCGAGC
AGCAGTAGCAGAGCAGTGCGTGTCCTCTattaggaccctgccgacgcacc
ggacttaacgaacaccggacacgcaaaAATCCGgtgtaaaagagaatttt
ttttaccaccggacataAGGAAGTcagatgtccggtgtcggagaaggata
ttttttcccaccggacaatcaaatgacaccggacttattacgtccggtgt
agcgaaaggatactttcttccaccggacaaatacaccggacagtccggtg
cgtcggcagggtcctcctCTATTCTGACGACAGGTTGGGTCAGGCCCAGT
TGAtagtttggttcgtgtcctccGGTCAACTCTaagtatttgagaaaaaa
tggttatcgattcaaagaaaaaatgtaattaGGTGATGgatagaaaaaga
tttttcatagaCTAAGTTAAAATTCACGCTTGTGACAAGCACCCCCCCCC
TACGCAAAAGCGAACGTACACAGATCGACTTgaccccccctccccccgtt
CGTTTTCGTTCGCTTTTTGCTGACCCCTCTCCCCCCTCGGcgacgaacgt
actttttgaatggcccctaACCTATACTTTAAAAACCAATATTTTACCCC
AGTTTAccatgaagtcgggtaactttcATCattggagggaaacttgcata
gccctccAAATGAATAACCTGGCTGggcattaaaatacaaagttaaatcc
aaacaaacctgatttacaaaaaaattgcgGGTGGTAAAATGTATAAATAT
CTCTAGCCTGgttatccaagctcaaaattttagaaaaaacaaaacttatC
CCAGCATAccaagttctaaaattatagataATGATATCATGGTAATGTAC
GTTAGCATATTATGTGATTACTTAATAGAactagagcttggtctccctaa
gaccagacccgatcaatcgaacttgtcgaaccaatcgaacaatcgaacta
atagaactccatcgaacgattaaagttcgattaaaaaaattaatcgaacc
taatcgaacactcaaaatttttgaagcaatagcagttcgattagttcggt
cagtaaaaagttcgattagttcgatgatattaaaatcctcatatcttccc
tctcttgcaaaaactttgtcctNgcaaaaactttgtcctggcacgcgatt
gccaatttcgacagttcccggacttaacagcttgatgtttattgtacccg
gatatttgtctatccggaaaaaaagtctgttgcgatttcgcgcgAGGCCG
AATGGCAGAATACTACGCCCGCCCCAACAAACCGCTTcttctggcgctaa
aaggatacaggaaaagtgtgtaatccgttatcggaagtaatttcccgatt
tacattccgaatttggctttgaaaagaagctaatatacggtggcggagca
gcacaaacttgtcaaacaaaattggtttaacgaactgatcgaaccgaaac
ccaatgatcgaacttaatcgaacactcacaatcttttaaaaaagcttaga
gttcgattaatttatttaatcgaactttaatcgttcatggagttcgatta
gttccattgttcgattggttcgacaagttcgattgatcgggtctggctaa
gagaatgaaagtgcaaacccaaaACTTttctagccaacccagggcaccaa
aacagaaattaattaAAAGGAGCCTTTAAAgatctaaagctattttaaaa
catctaaaagattacaccaaagtccatcaACACACGCAAACGTGTCACCA
TGAcaaaccatgttttcttggaaaataaaCTCGCCCccacttcttctttt
tcatgttttcatgtaacagaaagctgtaTGTTCACGATGCcagtcaaaaa
ttgtgtgaagtatcaaaaaatcaacaaaaacacatTTTTCTCAATATATa
actctaaaaatattttcaatatgaATGCAAAACTTTACCAATACATAGTA
AATATATACAACAAGAAATAGGCtaagtaagttttttttgaaaaaagtac
gtTTTTGGTGGCTGAAAGTGGAAAAATATACAAGTACCATTAAACATCAG
CCACCACAGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
tgaaaattaaaacaaaaatcctTGAGGGGAAGTGTCAATCTAAATTGCAG
ATAAAAAATGTACATTAAAATTTAAGGGTAAATGGTCCATTTTGGCGGct
gaaaaaaaggattttttatttcgttctttttatGAAAGTGTCTATCAGCC
ACCTAAGGATTGCCTAGCTTCTCTTTGCTCCCCCCTCTCACCAAAAATAA
GAGtatagaaagaagaaaattggcTTTGTTTTGTGTCTTGACTTGTGGCA
CTATGATATGATTCACATGGAAAGTGAATACTCCTTCGCCCATCGGAGCA
AACTCCTTCACCCTGTGGCGAAAATTAAAGGGCTCGAAAATAAAAGGCGC
GCAGAAATTAAGGGCATTAAGGTATCTCTTAATCTTAAGTGATGTCATGC
CTAATAATGTTTAATACAGAGCTGCAAATAAGCGTCCGTCATCGGTCAAC
GGTTTAACCAATCTCTGAAAAGAGGAATAAACTTGGTTGggatttaaaaa
taaatctattACACCCCTGTATTTTGCTTACATAGCCTATTCTTTTAACA
CTTGCTTccttcagttagtcacactagcgtctcGCCGAATTgcttatcaa
agattaatgctgcggaAGCGCTTTATCAATTACTTGGACTCAATCAAGAA
AAATGTgccgcaaaatttctaaagggatttatgaaaaaataaaccggtac
tttttaataaaattaacaCTAGATAAAACTATGAAGAATTACCTAAATTT
taagccatagatgaaaaaatttgaaccaagccaaccttaaaaactaattt
gaagaacgacttcccaagaaaaagatctacggatGAGAAGACAACCACCT
AGATCTGCGCACCGCCAGATAGGCTATTACCTGGAAATTTTGCCAGAGCT
CATAtgctgacccatttacatgtgtggAATTATTCTTAATTTAGTGTGTA
ATCAAGGCCTTACAATCAAGGTTTTATCTCGGGAATTGcataacaaattt
tggttggtcattattttttgtttcaagCTTTCGATATTTTACTTTAATTG
CCTTGGGATCTtcaacttgattcaggtaactctcaccCTTGTTGTTTCAA
ATACATCATCATCCTGTAGATGGCTGATGTTGTAATTTCTGAAaccttga
tttcctagtgtgactaactgtcctTCGTAGcttttaaggtatgtgttcac
ctttcttgacacattctctttaattgatcatatctttagaacaacaaatt
tttatatatcaaaagtatcttgggattttttttggaattgactttaactc
tttaaatcctaaattctgtaaaaatatcgataaaaaagtaaatttaaatg
tgattttttcagttatctgtaaattgaggaaaaacaacttggttagaaat
aaaatcctaagacactttttaagtttgatcttttgggaatgtcataaaaa
agaatgaagtcgatatctaaatactatgggtgactttaacttcgttaaaa
gtagtatggtgtggtaaaatttcatttttttctacaccaatttgaaattt
ttaacgagatgattgctgtttatttgagtaatcagtgaaatttgtcaaaa
atattactattcaatagaggtgagaacaaacatcagctgaattctctctt
ttgtcttttttgttgtttccgaaagagacaattatttgattaaataatcc
atcataagacgaactttgttttgaaatttaaatggttaaaactctggatc
aaaaaaagattttaagatcgcgattttaccaaaatgaaatccagtaaatt
ttcttccactttgactgaaaaaaatttttttgacaaaaaattggaaaaaa
ggtgtacacataccttaatagTGTTTCTAAAGTTTACTTTACTTTGTTCT
GGGTAATTTTATTGACGGTTGTTTCTAAGattacttttttattgactGGT
TTATTCCGTAgctttcaagagtgtttttaagttaacttttatcaacttgc
tttcttcgtaactttcaagagtgtttctaaaatcacttttatcaacttgc
tttcttcgtaactttcaagagtgtttctaggttaacttttatcaactcgc
tttctccgtaactttcaagactgtctaattttagaaaaatatacactgaa
tgGCCCAACAGGGGGCCAGTTTGAgcgacaggatttcatttctgtcggac
atgatgtctgattgactaaaaatatttatttgcaggcCTGTAATATCGTT
ATTAAATTAGAGGTTACACATCCAGCAGCCTAGTTTAGGTATAAACTTAT
TTCTTTTTttatgatttttgttggcgaaaacgTTTAGAACATCCCACCGT
TCTGCTCGCTATAATATAGCGAGTTGAACCTGATTGGTCGAAAAAAGCTG
TCAAATATTTGTAATAATTATCGGAGCAGCGAACTCACTCACTAAACAAT
TATGCGCAATTATCTCATTTAGCCGCGGCTTTTTTATCTTAGTAAGAGTA
ACCACggtaaaacatatcaaaatcaaaacattcaaatcaaATCTTTTACT
CAATAAGTAGACCTTTCTCAAAGCTATTCACAATTGACTGTGTTATTTAA
AGCTTTTGCAATCCTTGTTGCAattcttttcattcaaatttcctCGTAAT
GATCTTAAAaacttaagagccattttttttaaaaatcttcagaataaaga
aagtgtgatacctcaccctctcagattttgatgaaattttgaccaaatga
tccatcacacaagaaaataagaccatgaaaatttcaccttgatatctcaa
gtagttttgaagatacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNttttcttgtgtgatggatcatttggtcaaaatttcatca
aaatccaagaggatgaggtatcacaccctgaagactcttaaaaaaaatgg
ctcttaaataTCCACTAAAATGCTCCATATAAAAATCATAAGTTATGTTT
CGACCGATGAGTCCACCGCACGGGTATTGATGAAACGGCCCCATGTAAGT
CGATATGCATCATTTTTATAACCTAGCTTAATTTGGTAGAAAAGCTTGAT
CAATTCATGAGAGTAATTGGTATGACCAGTTGCTTTGAAATAAAGAACTA
TGATATCATTAATATTTCGCAAAATCACGTTGATTGAGAACAAAACCACC
TTTCAAGCTCTCTTCTTTGATCATTGCAAACCTTTCAGTTTGTGATTCAG
TTTAGTTGGTATAAAAGGTCTGCCAGACGCTTCACCGGAGAGTCTTTAAA
TTGTGAGCTccctttattttttaaaaggaTACTGTAGAAAGAGAACGGAG
AGTGTATTCTCCTCTCGCTGAGCTAATAGTTTGTTTGCTCTTTCCATTGT
TGGCCAATTACCTTACGAATGCTTTATGTAAATCTAATAGCGAGAGATTG
ATCTCTCGCGTTCTCtttctcttcaaaaacatgtaaaaaaccTAACAAAT
CGACACCCTGGACACTCACACTGCTACTCTGGATTCTAAGAGAttctacg
ttctgtaaaatgcaaagaaaaataaaaacataacagtAAAGATTGCGGCC
AAAGTAGCGGTATAAACTTTCAGATTAAAAGCATTGCTGTAGGGCTGTAT
TTTTAGGAAGAAAACAgctctaaaacgcttaaaattgagcttttttatcG
CGGTTTTTTGTCgaaccgccatctttgtttatgcAAAAGGCGCCATTTTT
AAAGCGACATTTTACGAATAATTAATACGGTTAATAAACAATAGAGAAGT
TTCTGATTCGCCAATTCGCTTTCTTGCAATTTTTGACTAAGTCTGGGATG
TTCTAAAcgttttcgccaacaaaaatcataaaaaaagaaataagtttata
cctaaactaccAGCAGCCATCAAGAAACGTCCAAATTCTCGCCATCTTGA
AATTTATGATCTCACATGAATTTTTACTATCCAACCACGCTCTTTTATTC
ACCTGCAATTCTGTCGGCGAGTAACTCGTAGAgtaaatggtagagtagag
cagCAAGTAGAAATGCCTAGTTCATTCAGGGGGGACAacagaggcagggt
actaacccatagggtactaacttgattttttactgaaattttgtttagta
ccacccacgtatatttagtaccgggtactacttcattttagtctacacaa
tagacagatccaggcttttaggccttactcttggtctataggcactgttA
TAGgtggccactagtgacccccaccgggaattgtttattaataggtttaa
acataatagacaacattcacaaaagatgtttatcaatagagattttNNNN
NNNNNaatcttaaattttacagattagaccaaGAGAGGGGTACTATTGTT
AGTTTTTCAGACTGAAAATTGACAGATAATTCAAGCAAACTATCAAACCA
gattttgtcctttgatttgcacacttcttgaccattttgagaaaaaaaat
tagtcgattaaaaaaatttcaaatcaaaaaaattagaatttgaaaaaagt
cgaAACATTGcaacaaactactttttttattgaaaaacagcaaaattctg
tgaaaaagtacccaaatagtatCCTTTACTTGCTTGAAGAGTGAAAAGTA
CACACACCCCCACCCCCaaagtagtaccgggtactaacttttttgaaatg
caaaaatagacaccaccacctggcTATGGGTCAGTACCCTGCCTCTGTAC
TCCCCCCTAGTtcatttgctttgaaattttgctactttgaatggtcaggc
atttgatggctatNCCTCTGTACTCCCCCCCTAGTtcatttgctttgaaa
ttttgctactttgaatggtcaggcatttgatggctatgcaagtttccctc
cactgattcaagttaccctccactgattcaagttacccaacttcatgGTA
TAAGCAGAGAGTCACAGATGTATTCCTTATAAGAACACACGGCGAATGCA
TTAGTCTGCAGTTATAGAAGTGTCTTTGTGATTGCGGCACTTGCCTTTGT
TGATTTGGTCTTCAGGCTATATCTTAACATTCCCGGTTGGATTCCAGGAT
TGTGTGATTGCTTGAAGAATGTAGGACTTctaaaattgaggtttttggtg
ggaaaaataaaaaaaggtttcaatttCACTGACCCATTAACAATCAATTA
GACCTGTCCTTGGTTTTCCCcctctaaaaaattgaaaaaacctgtttcaa
ttttcttaagaagGTTCAAAAATCCAATGATAGTATTAACCTCCAACTGT
TCTAACTTTTAATACAAATTACAccaatatcaaaacatatcagagggggt
GTGTGCAGCCTAGGGTACTATGGACTGCTTTTTGAGATACTTGGACCACG
TTGTcataaaaatcacaaaagattGCTTGTTTcaagctccaaccctgacc
ctaactggtaATAACCACACCTAAACTCAACCCTACTAGGTTGCCTGCTG
GTCCTGCCACAATCCCTGCATATCCCATTGAGAAGAATCCATCACTGTCA
AGGGGGGTTCgggttattaaaaaaaacacactaaattggatgttttatgt
aatttttacaatatttttttactttttagcacgaaATTGGTTCAATGTGT
AGAACCTCTTTTTTCATCAACTCAGAACCgtcaccctttttagtacattg
tactaactcaaatttagcttgaaaaaaaacaacactcCTTCACCTTTGAT
TAGTACCCCCTGTTTGCTTTGTGCCTGTCTTAAAGTGTTTGTTCCATTTA
TGTGAAGTGTATGGtcgtaaaaagattttttcagttttttgcagaaaaaa
tcattaatttttgaagccttgtagGGGTCAGTGGATTCTTCTTCAGTTTC
CAAGGGGGAACCAACCTGCTAGGGCACAATCACGATGATACACTATATGA
TCGCGAATATAGTCACTCGAAGGTAATATTGTGTCTAGTGTTTAGAAATT
TCAATTAGTCAGCATTTTAAAAGCACAATATTCAGATGTTTCTAAAAGCG
TAGTAACTAAAAGGTGAAACGTCAGAGAAACGAgtggaaacgggtggaaa
cgatacagaaacgggtggaaacgacacGAAAACGGGTGGAAGCGATACGG
AAATGGGTGGAAAAGATActgaaacgggtggaaacgacacGAAAACGGGT
GGAAGCGATacggaaacgggtggaaacgatacGGAAACGATatggaaacg
ggtggaaaccaGTGGAAACGATACGGAAATTtatgtaacgctagcccagc
atTAAGATACATCTCCGTCTATCACAGGCTTCGCATAACCGTAAGAGTAT
ACGGATATAGGTAATCTATGAaaaagtcgttgcagtgcaaatctttctca
aatttaaaaacccactttcccgtggaaataattgacgttttttgtttttt
tgggacccttggggcataagctacccgttgaccacaaaaattccaaaatt
cttgaattgaccgttgacaacattagaaCGGGACCCAGTGACGTCACAAG
TTTGGGAAAAACGATAtcgaaatgcgatatctcgagttcaAAAGGAGTTG
AGAGGTCGTTGACCCTTCATTAGATCGAGAATTTTAATGGAAAATAAGTT
AGGAggggtaagagtgggtatatatagacttttgaaattaaatatattca
aattgaggcatattaggtccgatgacgtcatcaaaaactgaaaaatacaa
tatctagagtttgagaaggatttaagcaatgattgacccctcattggaaa
gtgaaaagtttattacacATTGAGATGACATCATTTAGAGCCCAAATGAC
gtaacaaaacataaaatttgtcATATCTTTAGTTTTAAACCATTTTAAGT
GGTAATTTTTCGTTCTTTGGGATTAATTCACTCTATAGTTTCCCCTTTAC
TATCaaaagggcttatgatgcgttcagcttatgcgagtttataaaaaaat
tctcaaatttttccaaggggttgATTCGAGTATGAAAGAGGGAAGTGCAG
TTTTAAAACAAGAAATCttattgtttttcgaaaatgcAGTTATTATTTGG
TCTTCTAAGGCGCTTCATGTCGACCTCAAATTCGTAAATACAGCaagcaa
catttttttatatattttccatTCTTACACACTGATGACGctctcaattt
gacgttttactgCTCAAGTCAATAAGTTCCCGTTGTcgattaaaattaaa
ttgaaatagCTTTCAAACTTACTGAAGAAACTCTCACAATTAaagattta
ttatttactaagcttttatttactatttattttttacttctGGTTCTTAT
TCCATTTGAagcataaaaagatatttacgaTATAATATGTACTCCCGTGG
TTGATGAAAACTTATTCGAATTCtccttaaaaataaagtttgagagcatc
aacaataccatgtttatcatcctaagggctttgctaaaccggcgtttgcg
acgaagGGAACCGACTAATGATACAACAGAAGCTTTGTTCACTGTTGGTC
CTTTACCCGTTTCCAATCGTTTCTCCCCGTTTCCATGTCGTTTCCACCAG
TTTCCCTGTCGTTTCCAGGGCGATTCCCCACGTTGTTCTAAAAGCGCTAT
CAGTTTATTAATTACACTTACACAATCTTTTTTCTAGATGAGTTGGCCAA
AAATGTACAAGATGAATGGAGAAGGATACAACGCCGTAGGAGATTGGCTT
GtccctcatcacctcaaaacAATACATCCAACCTTCAGAGTCTTTTTGGA
TCCCCAACTTCCTTCAACACAGGATATTGGTCACCTCCTAGAGGTTCAAT
GTCACCATGTAGTAGTTCCATGTCTCCCCCCAGAACCACCACTGAGCGTT
CAGAACAGACCAGTTTGAATGTCAAACAAGTCGTTTCGCTCTGTGAAAGA
TTGTGGAAAGAACGCGAGGATAAACTTCGTGAAGAATATGACAAAGTTCT
CAATGATAGACTGTCAGGTAAATATTTTTACACATGGGCAgctttatttt
taaaagaaaaagtcacAGCTAATTAAGACGTAGTAGTTGTACAGTTGACT
TTCTCTGGTTCAATCTTTAAGTGGCcaagaattttatttaaattatctat
ttcataccttaaaacaagtttttttgcttatttaataacgcaggaattta
atttggcaggtgaccaaaaaagttttttcagagggaatttaatttggcgg
atagctggataaattaaatttgacaggaatttaatttggcggttgcagga
tatttttggcaaaaagcgttattaaataagcaaaaaaacttgttttaagG
TATGAAATAGCACGAATTCGGGGAATGCGtgaaatgaatttaatttggca
ggaacttaatttggcgccaaattttctttccgccaaaatttcttccttta
tggTATAGAGAGATTGGAATTGTACTgtatttaaatttcaaataataGAA
CTTTGAATTATAAAGCGTTGACTTCCACTGATTCTTGGCCTGTTACTTTT
CTCCCCATTGTTATTCAGCTTTATTTGTTGTTTTcctgtaaaattttatt
tatacaaGATTATTCCAATTTACAGAACAGTACGACTCCTTTTTGAAGTT
CACTCAAGATCAAATAATGaggaaatatcaaaattcatcATGTAGTTGTA
AGTATACCTTTAAATTTGTTCTCAGAATAAAAGGTTCtttattcttcaaa
atttttgacttttctgtCTCGAAGGCTTATTTTTCATCAAGGCTAGGCTA
GTTTGGCGAAAGAGACCACATTTTTCTGGGGTAAATACATCTGAATGCAT
TtatctttgtttaaaaaagatGCCGTGAGGgtttttgactttgttttttc
cctatttctgtacattaaatttctttttctatttcagACGTTTCGTAACG
TGCTTTGTCATCTGGACGAATGAATTGTAAATATGTCATTTAAAAATTTG
TATTTCCCTCATTATTATTAGTTTGAATAAGACATTGTTTCAAAGAACCT
TATTAATTTTGGTATTTAGTACTTTAGAAAGCACTTTCATGTCTCAGAAA
AGATCTGAAAGGAActaaatttgagatttttgctcAGAATGAGGTGATGA
GactgtaaaaaaactttcttgacatttttcaaatttgaagcCATTACTTA
ATGTCAAAATGGTGCTAGgaatttattttgattgttcaTAGCAATTTTAC
TAcagtattttatttttgttccaattATTTCTATTATATTCAGTTGCTGT
GGGAGATTGAGCCTCTCTCCAAGCAAATTGGAGTTCCAGATGGAATTATT
GACTTTCTGTATCATTTAGTTCCACTAATTTGTATCATAGTTTATGTTAg
gagattttatttttgttccatttttcttcttttacttAAAAGCATATAGG
TTAAATTTTGAACCACTTTTGATATGGTGAATTTTacttcaagaattttg
gaatgTATTCTTTTCTGGGACAATTTCATTATATGTATACTTTCTATAAA
CTGCCTAACTAAAGACTCTTAAGGTTTTTTCGAAAAGATATTGAAGAAAA
GAATTGCATCTTTCTGTTGCTATTACCATAGTCGAAGCTTCCAAATTAGC
AGTCTTCGAGACGGAATGATTTCTTACTCAATTgtagtatatatttttga
atgcttgataaattttagatttttagtgAGTTTAGTATATCCATcagttt
tattattatttcaatTACTATTACTGGAAATATGGCGTTCTACTGAATTT
TAATATTGTATTATATTATTTGTTcacaaaataaactttttttgagtATA
AAAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060490-exon-scaffold_343-1491911889:91979..92349 | TCONS_00060490-exon-scaffold_343-1491911889:91979..92349 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1510915933:91979..92349 | TCONS_00060490-exon-scaffold_343-1510915933:91979..92349 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1575043694:91979..92349 | TCONS_00060490-exon-scaffold_343-1575043694:91979..92349 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1491911889:105866..106195 | TCONS_00060490-exon-scaffold_343-1491911889:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1510915933:105866..106195 | TCONS_00060490-exon-scaffold_343-1510915933:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1575043694:105866..106195 | TCONS_00060490-exon-scaffold_343-1575043694:105866..106195 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1491911889:106804..106875 | TCONS_00060490-exon-scaffold_343-1491911889:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1510915933:106804..106875 | TCONS_00060490-exon-scaffold_343-1510915933:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1575043694:106804..106875 | TCONS_00060490-exon-scaffold_343-1575043694:106804..106875 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1491911889:107116..108035 | TCONS_00060490-exon-scaffold_343-1491911889:107116..108035 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1510915933:107116..108035 | TCONS_00060490-exon-scaffold_343-1510915933:107116..108035 | Clytia hemisphaerica | exon |
| TCONS_00060490-exon-scaffold_343-1575043694:107116..108035 | TCONS_00060490-exon-scaffold_343-1575043694:107116..108035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_343 | supercontig | scaffold_343:91979..108035 + |
Blast
BLAST of TCONS_00060490 vs. Swiss-Prot (Human)
Match: AKIR1 (Akirin-1 OS=Homo sapiens GN=AKIRIN1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.399e-18 Identity = 36/65 (55.38%), Postives = 51/65 (78.46%), Query Frame = 2
Query: 587 EQTSLNVKQVVSLCERLWKEREDKLREEYDKVLNDRLSEQYDSFLKFTQDQIMRKYQNSSCSYVS 781
+Q + ++QV +CERL K+ EDK+REEY+++LN +L+EQY+SF+KFT DQIMR+Y SYVS
Sbjct: 128 DQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIMRRYGTRPTSYVS 192
The following BLAST results are available for this feature:
|
