TCONS_00060479 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060479
Unique NameTCONS_00060479
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060479 ID=TCONS_00060479|Name=TCONS_00060479|organism=Clytia hemisphaerica|type=transcript|length=110bp
TGAATTTTAAACGCGTTTTCGTCATCTATCGTTTCGATATTATCTGGTAA
TGTTGATTCTTCGTTAGGTTTGCCGGTGAGTTCAGATgctaatttgcaat
agtaatCATT
Run BLAST on NCBI

transcript from alignment at scaffold_342:62119..62228

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060479 ID=TCONS_00060479|Name=TCONS_00060479|organism=Clytia hemisphaerica|type=transcript|length=110bp|location=Sequence derived from alignment at scaffold_342:62119..62228 (Clytia hemisphaerica)
AATGattactattgcaaattagcATCTGAACTCACCGGCAAACCTAACGA
AGAATCAACATTACCAGATAATATCGAAACGATAGATGACGAAAACGCGT
TTAAAATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038042XLOC_038042Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060479-exon-scaffold_342-1491911889:62119..62228TCONS_00060479-exon-scaffold_342-1491911889:62119..62228Clytia hemisphaericaexon
TCONS_00060479-exon-scaffold_342-1510915933:62119..62228TCONS_00060479-exon-scaffold_342-1510915933:62119..62228Clytia hemisphaericaexon
TCONS_00060479-exon-scaffold_342-1575043694:62119..62228TCONS_00060479-exon-scaffold_342-1575043694:62119..62228Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_342supercontigscaffold_342:62119..62228 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060479 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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