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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060463 ID=TCONS_00060463|Name=TCONS_00060463|organism=Clytia hemisphaerica|type=transcript|length=705bp
NCTAATATTGAAATTAGAGTTTCCAGCTCGATGGAGAGAAAAGAAGAAGC
TGAGATTGATGTCGACGAAACGATTTCTCTAGCCGATGAAATATTCAATG
TTAAAACTATAAAATATGTTTTGACATTTAAATCAGAGGAAGTAGAAAAC
ACAGCACAATTCCCAACGGTTGCAGATGTTCTAATGAAaaggaaacaaaa
tttgaccattttaaAGACCCTTCCATAGAAAGACAAAAAGATTGCGCTTC
ACAATGAACTTTTAAGAGATATCCAACAAAAACCCTTCCTCGCTGCTCAA
TCCCAGGACGAAGGACACAAATTGTTAAAAATCTTAAGCAATGCGTTATG
GTATTTAGATGGTAGATCAGAGACAATAAACGAAACTGCCCGAAAGAGAA
AAACTTTGACTGAGATCCCAAAAAAGGTAAGTTTGTATATTTACTTTTCG
TTACCATTGTAAAATTAGTAGGATTTAGCAGCATAAGTTTTTCATACGAA
CATTTTATATACAGTATACTTACTTGAAAATAAGAAAGTCTATATTTTAG
CTTCACCATTCCAGGGAACTGACGAAACTATACGCATTTATTAAATATTC
AATTTTGGACAAATCATTGACAAAACTGGACTGACAATAACGTAACGTTG
ACAGTAACAGCATTCTATTCATGGTTTGAGAAGTATAAAGGTTTTCAAGA
TTgga Run BLAST on NCBI transcript from alignment at scaffold_342:27304..28229+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060463 ID=TCONS_00060463|Name=TCONS_00060463|organism=Clytia hemisphaerica|type=transcript|length=926bp|location=Sequence derived from alignment at scaffold_342:27304..28229+ (Clytia hemisphaerica)
NCTAATATTGAAATTAGAGTTTCCAGCTCGATGGAGAGAAAAGAAGAAGC
TGAGATTGATGTCGACGAAACGATTTCTCTAGCCGATGAAATATTCAATG
TTAAAACTATAAAATATGTTTTGACATTTAAATCAGAGGAAGTAGAAAAC
ACAGCACAATTCCCAACGGTTGCAGATGTTCTAATGAAaaggaaacaaaa
tttgaccattttaaAGACCCTTCCATAGAAAGACAAAAAGATTGCGCTTC
ACAATGAACTTTTAAGAGATATCCAACAAAAACCCTTCCTCGCTGCTCAA
TCCCAGGACGAAGGACACAAATTGTTAAAAATCTTAAGCAATGCGTTATG
GTATTTAGATGGTAGATCAGAGACAATAAACGAAACTGCCCGAAAGAGAA
AAACTTTGACTGAGATCCCAAAAAAGGTAAGTTTGTATATTTACTTTTCG
TTACCATTGTAAAATTAGTAGGATTTAGCAGCATAAGTTTTTCATACGAA
CATTTTATATACAGTATACTTACTTGAAAATAAGAAAGTCTATATTTTAG
CTTCACCATTCCAGGGAACTGACGAAACTATACGCATTTATTAAATATTC
AATTTTGGACAAATCATTGACAAAACTGGACTGACAATAACGTAACGTTG
ACAGTAACAGCATTCTATTCATGgtgaaatttttcactttatGTTCGATA
CATTTAACAACATATTGAATAGTTGACAACGAAACTcgcttttaatttct
tgactGTATTTGACTATGTAACAATATGACTTTTGACTTGTTTTCCTCTT
TATCTATAAATGGCAAACAGATGTGAAGACTGACACAATTTGGTTCTTAT
AATTCAAACATTTTCGactttgtttttccttttttaaactGCAGGTTTGA
GAAGTATAAAGGTTTTCAAGATTgga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060463-exon-scaffold_342-1491911889:27304..27976 | TCONS_00060463-exon-scaffold_342-1491911889:27304..27976 | Clytia hemisphaerica | exon |
| TCONS_00060463-exon-scaffold_342-1510915933:27304..27976 | TCONS_00060463-exon-scaffold_342-1510915933:27304..27976 | Clytia hemisphaerica | exon |
| TCONS_00060463-exon-scaffold_342-1575043694:27304..27976 | TCONS_00060463-exon-scaffold_342-1575043694:27304..27976 | Clytia hemisphaerica | exon |
| TCONS_00060463-exon-scaffold_342-1491911889:28198..28229 | TCONS_00060463-exon-scaffold_342-1491911889:28198..28229 | Clytia hemisphaerica | exon |
| TCONS_00060463-exon-scaffold_342-1510915933:28198..28229 | TCONS_00060463-exon-scaffold_342-1510915933:28198..28229 | Clytia hemisphaerica | exon |
| TCONS_00060463-exon-scaffold_342-1575043694:28198..28229 | TCONS_00060463-exon-scaffold_342-1575043694:28198..28229 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_342 | supercontig | scaffold_342:27304..28229 + |
Blast
The following BLAST results are available for this feature:
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