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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060444 ID=TCONS_00060444|Name=TCONS_00060444|organism=Clytia hemisphaerica|type=transcript|length=769bp
GCTTCGCGTGTAGAAAAAAGTGATTCAACGAACTCAAATGGGTGTGTTTT
TAATTCATCGAGTCATACTCCAATTTCAAAATCAGTTTACAGTACATCAA
AGGAAAAATCTAGAGCTTCTTCTTCAAGGTCAACCGATGGAACCGTTTCG
TCAAAAGAGGAGCGCAGGAAAAGACACAATGACAACGCTAACCAAAGCTA
TCACCGACGTAAAAAAGCGACACAAGAAGCTAATGAAAGACAGGAAAGCG
AGCTGAGACAAGAAGAAACACGAAATCGACAACTTCGTGATGAAATAAGT
CAACTAACGACACAGAATATCGACTTGATGACAATGTTGTTAAATAAACG
CGATCAAGCCTTAAACTCTAACAATGTAGTGGTTTATCAACAGATTTGTA
ATCTGTTACGGCCactattttcagaatttgttgAACTTGTAACAAAGCTG
ATGATTTTACACGATAGAGCTTCAGTTAATGGATATGCAGATTTCTATCG
CCAACTTATAGAAGACTGTGAAGGTTTTATTTCGAGACTGAATGAATATG
AACGTTCTTATGTATTGCGTAATGTTGAAATTGCTTTTAGGTTTTATGaa
tcaaaaaaatctaattaGTTTTTCTTCTTATGATTATTTTAGTTTAGTAA
ATCTTATATGtttatttttaaagtatttttggatAGTTGATATAAGGTCC
GGAGGGATACATAGCCGCACTTACTTAAGGGtccttttttaaaaattccc
aAAGTAAATTGTAAAGCCC Run BLAST on NCBI protein sequence of TCONS_00060444-protein >TCONS_00060444-protein ID=TCONS_00060444-protein|Name=TCONS_00060444-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
ASRVEKSDSTNSNGCVFNSSSHTPISKSVYSTSKEKSRASSSRSTDGTVS
SKEERRKRHNDNANQSYHRRKKATQEANERQESELRQEETRNRQLRDEIS
QLTTQNIDLMTMLLNKRDQALNSNNVVVYQQICNLLRPLFSEFVELVTKL
MILHDRASVNGYADFYRQLIEDCEGFISRLNEYERSYVLRNVEIAFRFYE
SKKSN Run BLAST on NCBI transcript from alignment at scaffold_341:74333..75101 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060444 ID=TCONS_00060444|Name=TCONS_00060444|organism=Clytia hemisphaerica|type=transcript|length=769bp|location=Sequence derived from alignment at scaffold_341:74333..75101 (Clytia hemisphaerica)
GGGCTTTACAATTTACTTtgggaatttttaaaaaaggaCCCTTAAGTAAG
TGCGGCTATGTATCCCTCCGGACCTTATATCAACTatccaaaaatacttt
aaaaataaaCATATAAGATTTACTAAACTAAAATAATCATAAGAAGAAAA
ACtaattagatttttttgattCATAAAACCTAAAAGCAATTTCAACATTA
CGCAATACATAAGAACGTTCATATTCATTCAGTCTCGAAATAAAACCTTC
ACAGTCTTCTATAAGTTGGCGATAGAAATCTGCATATCCATTAACTGAAG
CTCTATCGTGTAAAATCATCAGCTTTGTTACAAGTTcaacaaattctgaa
aatagtGGCCGTAACAGATTACAAATCTGTTGATAAACCACTACATTGTT
AGAGTTTAAGGCTTGATCGCGTTTATTTAACAACATTGTCATCAAGTCGA
TATTCTGTGTCGTTAGTTGACTTATTTCATCACGAAGTTGTCGATTTCGT
GTTTCTTCTTGTCTCAGCTCGCTTTCCTGTCTTTCATTAGCTTCTTGTGT
CGCTTTTTTACGTCGGTGATAGCTTTGGTTAGCGTTGTCATTGTGTCTTT
TCCTGCGCTCCTCTTTTGACGAAACGGTTCCATCGGTTGACCTTGAAGAA
GAAGCTCTAGATTTTTCCTTTGATGTACTGTAAACTGATTTTGAAATTGG
AGTATGACTCGATGAATTAAAAACACACCCATTTGAGTTCGTTGAATCAC
TTTTTTCTACACGCGAAGC Coding sequence (CDS) from alignment at scaffold_341:74333..75101 >TCONS_00060444 ID=TCONS_00060444|Name=TCONS_00060444|organism=Clytia hemisphaerica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_341:74333..75101 (Clytia hemisphaerica)
CtaattagatttttttgattCATAAAACCTAAAAGCAATTTCAACATTAC
GCAATACATAAGAACGTTCATATTCATTCAGTCTCGAAATAAAACCTTCA
CAGTCTTCTATAAGTTGGCGATAGAAATCTGCATATCCATTAACTGAAGC
TCTATCGTGTAAAATCATCAGCTTTGTTACAAGTTcaacaaattctgaaa
atagtGGCCGTAACAGATTACAAATCTGTTGATAAACCACTACATTGTTA
GAGTTTAAGGCTTGATCGCGTTTATTTAACAACATTGTCATCAAGTCGAT
ATTCTGTGTCGTTAGTTGACTTATTTCATCACGAAGTTGTCGATTTCGTG
TTTCTTCTTGTCTCAGCTCGCTTTCCTGTCTTTCATTAGCTTCTTGTGTC
GCTTTTTTACGTCGGTGATAGCTTTGGTTAGCGTTGTCATTGTGTCTTTT
CCTGCGCTCCTCTTTTGACGAAACGGTTCCATCGGTTGACCTTGAAGAAG
AAGCTCTAGATTTTTCCTTTGATGTACTGTAAACTGATTTTGAAATTGGA
GTATGACTCGATGAATTAAAAACACACCCATTTGAGTTCGTTGAATCACT
TTTTTCTACACGCGAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060444-exon-scaffold_341-1491911889:74333..75101 | TCONS_00060444-exon-scaffold_341-1491911889:74333..75101 | Clytia hemisphaerica | exon |
| TCONS_00060444-exon-scaffold_341-1510915933:74333..75101 | TCONS_00060444-exon-scaffold_341-1510915933:74333..75101 | Clytia hemisphaerica | exon |
| TCONS_00060444-exon-scaffold_341-1575043694:74333..75101 | TCONS_00060444-exon-scaffold_341-1575043694:74333..75101 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_341 | supercontig | scaffold_341:74333..75101 . |
Blast
The following BLAST results are available for this feature:
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