TCONS_00060415 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060415
Unique NameTCONS_00060415
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1664

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060415 ID=TCONS_00060415|Name=TCONS_00060415|organism=Clytia hemisphaerica|type=transcript|length=1664bp
tttcacttttattgAACCTCATCCACACTTGACAAGAACTTAACTAGCAC
TTTCCTACTAAAGAAAAATCAACGACCAGTTTGTTAGTTGTTGCGGAAGT
TGTTGCAATATTCGATTGACATGAGCGATATGAAATATTTCGATCCACTA
CATTCGTCATACAATGAAAGCCTTATTGACGGTGGCCACAATGAATTCGA
CCAGAAGATCAGACAGTTCTCAAAAACAATAATGGCGTGTAAAAGTTGTG
GTACACAGGAAAACGGAACTCAACAGCGCCGACGGACCTTTCATTACACA
AAACAGCCATACCAAGAAGACTACCCTTCTACACAACACGATCAGCATGA
GGTAGACTACCTAAAACACGAAATGGAGGAATTGCGGCGTGATAACAATC
GAATGTTTCTCGAAACCACGTATCTACggaaagaaaacaatttatatttg
aaaagactTAGGGAAGAGCATATTCTGCGGGAAAGGCTTATGCATCAGTT
AGACGAACAAAGGCATCATCAACAGAACACACAAAATTCTTACCAAGATA
TTGATTCCCTCAACTCCAAAACACTCGACTCAGATCTCATGCGAGAACAA
ttAAAAGCGTACAGAGACGACTTCAACGAAGAAAAGAGGATACGCGAGCG
ATATTGCAGAAGGAATGTTGAACTAGAACATGAATTAGAAGAAGCTAAAC
GCACCATGGAAATACAACAGAAGAAATTAATATGCTACGCACAGATCGTA
TCACAACCATTACACAAACTCGATGTACCTCTTATATACCCCTCATCGGG
CGTCAATAACAAATCTCACAGCGCCTCATCATCTCCACCCTACCCGCCTT
GTCCTCAAAACAACTATAATGGGCGGACGCCACGTATCGCCCGTatagaa
acaaagaaatatcCAGCAAGCAGTAGTGATCATATCATAGAAGCAACTCT
AATGTCAGGTGATCTTCCAACAAGGATTAAACGAGCATCTTCGATCGACT
CTTGTAAAGATGGACTAACAAATCCTTCATTATCTTCAACAACGAACACA
AAAACTCAGAACAGTTTTACGTGGTCCTTGCATTCTTCTGATgaTGCTCC
AACGAAATACAGTTGAAGAAGCAGAACGGCAGAGAAACGGTTGTTTTTGG
AAGTAACACATCAGAGGACAAATTGCTTGTGCATTCCCAATAAGGTGGTT
CAAATAACTACAGCGTACGGGAAAGTGTGCAGAAGGTTTCTGAGACGGAA
AGTTATCAAGGGGTGATACATTCCTCAGATATCATGATAGCGAGCAATTC
AATAACGCCTCTTTGAATACCATAACAGAAGCTCGCactttccaaaaaga
aaagtcGAAATCCTTGTGGTTGCGATGAATCAGACACAAAGAAACATGAC
CAGAACGCATCGATTTGATGGTTTTGCCGTCACAAGGATACACCTCTGTT
TGTCGGGTTGAAACTTACAAAGTTCGCCCAGCGCGTACATTTAAGATTAT
ACCAGAGTTGTTTTTATCGTGAGTTTTTGTTCATATCAATGTTAATTTTA
TATTCTGTCATTAATTATTTTACTGGTCTTTGAGCAGACTAAGTATAGTA
TattgttttgtatcatattgaACTTGTACATAGATTATTGTATCggaaga
aattttaaaagctt
Run BLAST on NCBI

transcript from alignment at scaffold_341:178495..194890-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060415 ID=TCONS_00060415|Name=TCONS_00060415|organism=Clytia hemisphaerica|type=transcript|length=16396bp|location=Sequence derived from alignment at scaffold_341:178495..194890- (Clytia hemisphaerica)
TTTCACTTTTATTGAACCTCATCCACACTTGACAAGAACTTAACTAGCAC TTTCCTACTAAAGAAAAATCAACGACCAGTTTGTTAGTTGTTGCGGAAGT TGTTGGTAGGTAATATTGTTTACACATTTAGCCCGTTGCCAATTAACCTT GTCAACCACCTTCTAGCTTCCTTCAGGCTTCAATGAAGAACTTGGAAATT GCTGTATGGTTAGATTCGTTCTCACTGAAGTCGCGTTGAATAAGATATTA CCGAGTCTATGTATCGGAGGATATCAGGGCGATGGTAAATAAAATCGATA CAAAACAAAGTCGATAGTCGATGTATGGCTCTATATCGTAATTGCTCACC TGAACAGACGACAGTATTTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGA CGGTGATTTTGGAGACATGTTAACTTTGCTTTATACTGTCCACTCGATTT ATCTCGAATACATAAACTCACTATTACATAAACTTCGCCTGGGAGTCTAA TGGTGAAGTTGAGTGTGTCTCGACCGTCTGGAATGTCTAATATTGCAAGG GGGGGTTTCAGGGGGTACCCGATTCCGCAATTCCGTCAATTTTTTCTCCA ATTTCCGTCCAACCGTCTTAAATTGAACCAAAATTCCGTCACCGAAAATT CCTTTGAAATTCAATATTTTTGTCGAAAATTCCGCAAATTTTGAATATCT TTTACCAATTCCGAAATTCTGCTAAATTCCGTTTTTCCACACTAAAATTG TCTAATTTTCCGTCTCCGTCAGAGTACCCAATTTCCGTAATTCCGTCTAA ATTTTCGCCAAATTCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NGCACTAAAATTGTCTAATTTTCCGTCTCCGTCAGAGTACCCAATTTCCG TAATTCCGTCTAAATTTTCGCCAAATTCCGCCACTCCGTCCGAAAAAACG GCCGATTCCGCTCCTCCGCCAACCATGAAACCCCCCCCTTGCAACAGTCC TTTAGACACAAAAGCAAATATTTATCGTCCAATTACGTAAAACTTTCAAG TACCTTTTTGGAAAAATGCCTGACTAAACATCATTGTTATATCAGGCATG TTAGACAGCACGCTTTTTCCAAAAAAAATGTAATTTTCCGCCATACTGAA CAAAATATATTTGAAACATTTCGAAACTAGACGTAAACTAGACAATAAAG TCCAGTTTTATGCTGTTTTTACATTAGAGCTCGTTCCAGCCTGTCAATCT AATGGTATTAGAAAAAGGCTTGGATGTGAATGAAAGGTAACTGAGCTGGC GAAATAAGTATCCAGCAGTTTTTCTTCCAATGTAAANTCCATTCTTTTCA CTTTTATTGAACCTCATCCACACTTGACAAGAACTTAACTAGCACTTTCC TACTAAAGAAAAATCAACGACCAGTTTGATAGTCGTTGCGGGATTTGTTG GTAAGTAATTGTTTACACATTTAGCCCGTTGCCAATTAACCTGGTCTTAA CCACCTTTTAGCTTCCTTCAAGCTTCAATGAAGAACTTGGAAATTGATGT ATGGTTAGTTTCGTTCTCACTGAAGTCGCGCTGAATAAGATATTACCGAG TTTATGTATCGGAGGATATCGAGGGCGACGGTAAATGAAATCTATACAAA ACAAAGTCGATAGTCGAAGTATTGCTCTATATCACCTTTGCTCACCTAAA CAGACGACGGTATCTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGACGGT GATTTTGGAGACATGTCAACTTTGCTTTATACCGCCCCCCTCGATTTATC TCGAATACATAAACTCGCTATTAGCACAGGCCTGGGAGTCTAATGGTAAA GTTGATTTTGTCTCGACCGTCTGAAAATGTCTAATATTGTAACAGTCCTT TAGACACAAAAGCAAATATTGATGGTCCAATTACGTAATACTTTCAAGTT CCTTTTTGGAAAAATGCCTGAATAAACACCATTGTTATATCAGGCATGTT AGACAGCACGCTTTTTCCAAAAAATGTAATTTTCCGCCATACTGAACGAA ATATATTTGAAACATTTCGAAACTAGACGCAAACTAGACAATAAAGTCCA GTTTTATGCTGTTTTTACATTAGAGCTCGTTCCAGCCTGTGAATCTAATG GTATTAGAAAAAGGCTTGGATGTGAATGAAAGGTAACTGAGCTGGCGAAA TAAGTATCCAGCAGTTTTTCTTCCAATGTAAATGGGATATCTATTATAAA TTGTTCATTCAGCCAGGAAGTGATGCTTAGAGTAAACACCTCTGTAGGTG GAGCCCCGGTGGAACTTTTTTCCTCAATGGNTGGGATATCTATTATAGAT TGTTCATTCAGCCAGGAAGTGATGCTTAGAGTAAACACCTCTGTAGGTGG AGCCCCGGTGGAACTTTTTTCCTCAATGGGGATAAAAATTCTGGATCAGG TCCGGTCCAACCGTTAAACATTGAATTTTGAATTGGGAATAAAATAAAAG TTAATTTCCAAATGGGGCTGAAATTCTAAGGTATTTTCCCAACGGGAACG AAATTTTTGTCAATCTTTCCATTGGGCTGGGCTCCCAGCGGGTCTGTGAC ACGGGGGTCTCTTAGTAAGTTTGCGACTGTAAACAAGAGCAACCCGGAGT ATCCATTTTGTTTAGCTGTCTATCATAAAGACGCTACTCCTACTCCCACT GTTCTCCATTTAACCCCAGTTTGTCTCTTTAGTTACTGAACATCAGGCAG AGAGGCACCAGATACCATTTAAGGAAGGTGCAAGCCGGCTAGGGGTGGAA CCAACAATCTTGTGAGCTGAAGCTTCATGCTAATGTCGCTAAGAGTGACG GGGGACGTGTCGCTATTGATACTTTAGCTTCTAATAGTGATTAAACCGTC TAGATAACTTAAGTTCCACACTCGCTCAAAGTTTGCATGTCTGAAATGGT TCATTCAAATATGTTTTCTTACGAAAGTATAAATCAAAACATTGCCACTC GAAAGTCTTTTAAAGGTCGCTGCGTGATGGTTAGGTTTTTCGAAAGATGA CTTATTTGCGTGATAATACACTGTTGTTTAAAACCTCTTTAAGTTTTAAA GTAAGTTTCGATAAGTATCTCTATATATATATATATGTGTATGGGGATGA GTTATAAAAGTTTATTCATTTACGATGCTTAGTGAAGAATATTTCCTAAT GACGAGAAGGGGTTCTTCATTTCGATAGAGCTTGTATCGCTTGTCTTAGA TTCAGCTGAACTCGGTAAGTTTGGTTTTCTTATCCACCAATGTTTTGTTG GAGAAAGCTTTTAAAAAATCGATTTTGTGAAACATCCGAGAGAAATCAAA CTTATAGTGTTTTTGAGAAAAGTACGGAGAGGAAAATGGGTTGTATGTAA ATTTGGTATAGTGGAAAAGATTTTGAAGGATTTAACGAAATGTTATCTTC ATCACATGGAAAAGCTTCTAATCAACACACTTTTCCATGACCTCTGCTAT ATAATTTGCTGTGCTGAGCTAATTACATAGGAGATTAGAGATTACATTTG AGAACTTGAAATGACATCTGAGTGTTTTGCTGACCCCGTGTTTATTCACT GAGAGCGGAACAATTTTTTGTGGATACGATTTTGATCCTTAGAAGCAAGC AGGATTGAAATCAGATTTTTAAAAGGAGGAAGCATAGTTTGTCTATTGTC AGCAACGAAAAAAGTTTCCTTTTGTTTTCGAATAAAAAGAAAATTCTTTT TCTATAAAGTCACTACTAGAAACTAAGCAGCAACGTATTTCGAAACTCTC ATATTTTATCTGATCTGAATAAATAATATAATAGAAAACGAAAGGAATGT TACTACCAGGGGAGCGCGAGTTTTCATCCATTGAAACGGACAGACAAAGA GAAATATATACTTTCGAGTCTTCGCTTTCGAATCGAAAGATCCTCTGGTG GAAATATTTTGGTTTCATGCAAACATCATAGAGAATCATAGAAAGAAGTT TTATTTTCTTGTTCGATGTGGTTGAAGTTGATGGAATAAGGTAACGTAAC ATTTGGGGTAAAATGAATATATATTCCTTTTTATCATTTTTATGAAAAAT TCTTTTGTGTATAGTGCTTGCTGGGATATAGGAGCGTGTAAAGGTTCTTG GGAAGATTTTTCAAAAAATGAGTGATCAAAAACATCAATGATTACCGAGT TGAATTCGTCAAAAGTATTTTATTATGAGAAACGCCTAAATCTGGAGACT TAAAAACCTGTCGTATAATGGTATATTTTATTTTTCATAACTTACGGTAT GAAAATATAAATTGCTTAAAGAGGCCCAAAAGGTTTTCGTGATGGCGTGA TTGGCGTTTTTTCAAGTTCGTGGGTTTCGTGATTTAAGATTTTAAATTGT GTGATTGCGTGATAAAGTTTTATTCGATTAAAATGATTGACTTTGATATT CATCCTAAAGTTATGTGTTTGTATGATAAAACTCCAAATTCACCGACGCT ATTATACTTCAAAACATACTTTAAATCCTTTACTTTCGAAAGAAGATGAG CTTAATAATCTTTAGAAAGTTTAACATCATTTCAGTCCTGGTCCAGACAG ATAAACAGACAAACCAAAGTTTTGCTATATCTCTATACTATATCTTTTTA TAAGAACGGTGTTTTTCCATTTCACTATGGATATTCGTAACTTCTTGGGA ATGAAAATTATCCTTAAATATTCTACCCGTATTCTTAGTTCAGATCAAAA TTCAACCTATAAATTTTACACGAACACTTTTAGCATAAAAGCTATTATTT AGGGATCACGAAAATCCCAAAAATGATATATTTTTCCCCAATTCTCAAAA TCTCAATTAACTCCCACCATCTTAAAAGTTTAATACCAATATTTTTAGTC TCTTTAAAACTTGTAGGAACCATTAAGTGTTTGTTCTGCAGTTTTATAAC CATTTCACACTCTCTTCGTTATATTGCCTAGTTGCGTGACTTTGAAATCT TCCCGTTCAGTAAGTGCGTATTTCAAGAAAACAATGAGATGAGAAAACTT CCAATCGCGTGCCTTCGAAGGCAATTAAGTTATTTAAGTTGAATATAAAG TATAGTGCAATTTTCATTGCACTTTATTTTAAATCTGGCTTCTTCCCAGC ACTGACGGAAACACAACAGTTTTCAATGCTCACTTAATAACACAAATAAG AGAGATATGTCTTGAAATCCAGAGGAGTTAATGTAGTCACAGTTTTTAAA TAGAAAATGTGAAACATACCAACGAATAAACTAAAAGATGGAAAGGAAAG GAAAACAATTTTTGTGAACGAAAAACTGATGTAAGGCGAGTTTACAACAA TAGATTTTGACAACTGATGATAACCCTGTTTCAATTGTAATTTCAATCTC TGTTTTCCTTCTTTTCAGCAATATTCGATTGACATGAGCGATATGAAATA TTTCGATCCACTACATTCGTCATACAATGAAAGCCTTATTGACGGTGGCC ACAATGAATTCGACCAGAAGATCAGACAGGTTGGTACAGCTTACAATCTC TTTTATACATCCATTCATAAATGATCCGTATAATTTGCGGACAAGAAATT CTATTTCATTGGTCCATTTAAGGAACTTTATTGGTACCTTTGGATTTTGA ATCCCTAGTTTCTTTAATTGAAAATCATTTTCAAATTTATGAAGAAGATG ATCATTTAAATATTTCGATATTTAATTTGAGAAAGATGTTTCAGCTTACA GGAGACACCAGTTCTTCCCTTGACAAGCATTCATAATTTCTCTTTTATTT GACACTATTAAACCTAGACCAACATTCTCATATACAACAACACAGCCGAC TTACAAAACTTTAGAATTTACTTTGCGTACTCGCAAACTGCAAAAAGAGG CTTCTGGTGGTCGCAACCGAAAATGCTAAAATAAATAAGCAACATTGCAC AATCGTGAAATATTTGGTGTTAGGGAAATTTAGTCTCCGATTGTCTTTTT ACTTCTAGTTGCGGCTTACAACGCGGTGAGGGCCTCTTCAGTTTTTCCAA ATTTTTTGGTATTATGTCTTTTAAATGCCTCTTGACTCGAAAGTAGAACA ATGAAAAGGCTGGCTGCCAGTAGATATTTTCTGTGGTGAAGCTGGAATTA TTTTTTAACATATGATAAATATAGAATAATGTAGTTGATACTTCATTTGA TGTTAAGATTATCCACAAAGTTGCAGGGGGGTTGGGGGTGATTCGCAAAT GTGTCTTTCACACAGCTCGAAAACCTCTTACAAGCGCTACAAAAATATAC TTTTTCTCTAAAAGATCCAAAAGTTCGTTTTTGACGAGAAGTTTGGAAAA TTTCACAACGCTTCAAAAATCAGGTAAATTACTCAATATTTACGCCCCAG GATGGCAAGTAAACCCGGGGTTAAAGGATCCAACACAATTTTCATATCGT TTTGAATCACTTTCATTTCCAAAAATAAGCAAAATTGTCAAGGCCTTTTT TCATGATCACTCCTAGACGGCGCTAAAAGCCACTCGGATAGTCTACAATT CTGTTTGATTTTTTCTCCAATAAGTCAGTGAAAGTTTATTTATATTTGTG ATTTGTCAATAAACGGTTTTCAGACCAAGGCTGTCTCTACCTATTGGTTC CTAAAGATTTCTGCGATAAAACTCAGTGACTAGTGAAATTATAACAATAT CAAATACACCCCCTTCTCACAGACCCATCGTACTACAACTCGATGAGGAC TGATTAACGATATTTTTATGACTGGGATTTAAATTCCATTTTTTTCAAGT CAAAAAATTCAGTGGGGATAAAGAAAATCTTTCCAGTGGGAAGGGTGTTC AAATAGGAACTTTTGCTCAATGCACAAAAAATCAGTATGAAGTTTGATGC AGGTGCTTGAACCTTGACCACATGAAGTTTCATGAGGAACACAATCAAAA ATACCATTGAACTTGGTCGATACATATTAGCCTTTTATCAAGCAGCCCTT ATAGGCTATTGTTGTTTTTACAGCTACATCTTAAGCTATTCTAAACATTA TCAAAAGGTCTGAGAAAGGTCATCTAAATCATAATTGAGAGGTCAATCAC GTGGTCAAGGTTCCTTTACTCTAAATTACAGTTAATTTTAAGGTATTCAA GAATTTCCTTCCCTTTTCTTGTAATTGCCTCTTTCATAAATAGCCACGAG ATCGTAAAGATAAAATTGCGGAAGGTTGCACCAACCAACTGAAAGGTCAA CTTAAAGTTAGTTTCTAACGGAATAATTTTCTTCTGTGGCATTTTTCCCT TCAACCTTTTGAACTTGAGGAACATTTAACGGCTAATCTATCATTATTTA GAATTGAATGCCCATGTAATTGACCCCTTGATTGTATAGTTACTGTCAAA AACAAGACTTACTATGTAGATGATAGANTCCATGTAATTGACTCCTTGAT TGTATAGTTACTGTCAAAAACAAGACTTACTATGTAGATGATAGAGGATC ATGCAAAAAAGTTTTTTGATATGAAATTTGTTCGGAGATAATTCAGTGAG ATTTAGCAATTTAATGGGGACAATATCATGTGTAGAAGAAAAGTAACGTA GGGAGGATTTGATTGTTAGGGACTAGGGAAAATTTTATAGCAGATATATA TTCATTGTGTGGGTAAGAGGGCAGATGTAATAGATTTCGTTGTCATTGGG ACGAAAATAATTTTCAACTGTGTAGATGGCCTAAATATGTATAGCTTGAA ATATGAAATCAGCATTATTGAACTATGTTTAAATATACACCTTTAAAATT TCACATGGATTTTCAAGGGATAAAATGTTGGAACTTTTCGTATACGTGAA AAAGACAGATTTTTGTGGGTTGTGAGAAAAGATTCAAAAGCGTAATCGAA ATTCAAGCATCGCACTTTTAGTATTTTCATATTTCACAGGATTTGCCTTT TAGGACATCTTCTTTCTTTTACACCACTACTATAAATCAACTTTTTATGG CTGAGAACTCTTTTCCGAAGTTGATGGCGAATGAAAAACAATCATTTCTT TCTTGAAGGAACATTTGCACAGATTTGTGTAATTATCCCCTGTACATTGA TTAGAATAGAATGTAACAGATGATGAAATAACCTAACAATTAGGACACTT GTTCACTTATGTTGAACTTGTTATTCTACTGTATCAGAGTTACGTGTAAC CCAGCAAACACACAACGTTGTTTTAACGTTCAATTTACGTTATTTGGACG TTATGAATGCCAAATGGACGTTGATACGACGTCGAGTGCCGGCTGGGAAG GGTCGTAAAGAAATTCCAGGTCCACTACACGGGTAAAAATGAGTGATACT GACATTTTAGGGGAAGGTTCATTTCTCGATAGAATACAACCAGAGGGGTA AATGTGAGATTGAGAGAGATAAAAAGGATTAACGAAAAATAGTTTCTGTT CCTTGACGATAACACGTTTCAGTTACTGTGGTTTTCACTCTCTAAATTCA TTTTTTCCATGTACAGCTTGCGAAAGTGGGAAAAATATTGAAGGAGATGA AATGTTTTATACGTGCGATCATCTTATTTACTTGGAAAGCTTTTTTCCAA CGTTAGATGGATGTTATTTTAACGTTGGGGGATTTTAGATTACATCTATT CTTGATATTCATGACGTAATCTTTTATACGGAAATACCTGAAAAACACCG GGCGTTTGCCACCAGTCTTGAATTAAAACAATGAAACTGGTAGCAAACGC CCGGTGTTTTTCGTGTGTTTCCGTATGAAATATTATGTCATGAATATCAA GAATTGTTTTGTTGTTTTGCAGTTTGAAATGGAAGGCGGATACTTAGGCA AAGACGGGTGCCGGGTATGTGCAGACAATAAGGGCCTGTTTTTTCACCTT CCAAAGTCTCTCTAAACAGAAAATTTCAAAGAAACTCCTCTAAGGGTCAG AAGACTCACGATAATTTAAGAAAACATTTTTGATTTTGAGAGAAAAATTT GTAAAAAAGTCTCTCTAAGAGTCGGTTTTTGTTGGTCCCGCACACACCCC TCATACGCCAACCCTAGTACCCTTCCGGGGGTTTTCTCAAACTTAAAGTA ACGTTGGCTGTTAATAAAAGTTCAGTACATTATAGTTTCATTGAGGGATA AAATTTGAGAATTTTTCTCTCGCCAGGGAAGACATTTTGGTAAATCTTTT ACAATATTGGAGACATTTCGTGGTTTTGTTTCTCTAGTAGTTTCAGACTG GATTAATATTTAAATTTATAAAATGAAAAGATAAAATGAAAATTCNAATA TTGGAGATATTTCGTGGTTTTGTTTCTCTAGTAGTTTCAGACTGGATTAA TATTTAAATTTATAAAATGAAAAGATAAAATGAAAATTCTGAGAATTTAG CATATTTTGAACGTCATCGAAAGAGTAGAAAGAAAAATGAAACAAAAGAA AGGCGAAGACAATAACAATGAAATGAAGTTGCTGTGTCACAGTACAAAAG ATGCTGTTCTTCTTAAGATACGTAGTTTTGTAACTATAATTTCTCACTAA AAAAGCTTTTGATTGATAAAGTGAAGTGAACAGTAGAAGCCTTGAGGATT TTAGCAAAGCCTTATTTCCTTTTTTTAGAAACAGCGTTATTTAGTGCTTG CTAATTTGAAAGAGAAGAATATCAAGGGAGCGTTATATTTGATGAAAAGT TAAAAGAAACAGTCATGGAAAGTAAAATATTGGACTAAAAAAATTAAGAA GAAGATTAATATTCTCTTATTTACTTGTTACACTTTGAGGGTATTTGTTC TATTGAAACTTCACTTTTTTTGGAATTGAGAGAAACGCAAATTTCGGCCG TTAAACATCGAACAATGAAATCAAGAAATAAAGTTCTAAGGGACACGTTG TATACCGCTGTTGTTGTAGGTATATTTACGAGAAGAAGACTGAGAAGTAG AAAAAGTTTGGCTTGGCTGTTATAGAGTTAAACATTTCATCTTTTTTTAT CCTTAATTCTTTTTACTTAAAAAAGAACTTAGAGTTGCCAAGGTAGGCAA AGAAGATACATCGTTTGAGGGGCTGTTTTTATTATGGTGGCCCGGTTTAC GTCACAGTCTTTGACAAATCAAATGGCTAGAAATAGATCACGTGACGGTC GAAAATTATCGCACAACACCTAGCATGAACATTCCCTTATTCAAGAATAG TGAAGCGAGTTTTCTGTTCTGAAATTTGACATAGTTGACAGTTCCCATCT CATTTTTTTCTGTTTCTGGGATAGAGCCATACGGTTTAAAAAAAGTGAAA AAACAAAACAGATATTGCAAAACGGTAGGTTGAGGGAAAGATAGCGTCAT AGGATTTCAGAGTTTTATCCCCGTGAAATACAAAAGTAAAATCTGGTAGA ATCTTCGAGAATTTGATCAACTTTTTGATGATTTTCGTTCATGTCGACAT AATCATGGTTCCACGGTGTAAACAGATTTCTCCAATTCAGGAAAATCTTA CTATTTATTGTCGCTCTTATCAGATTATCTTTCTTCTTTTTCAAGCCTAA CAGGAGCTTGGCTCATTTTGATATATTTTCGGATCAACCCCAAGTTATCT CATTTCTTATTATTCTTTCTAGTTCTCAAAAACAATAATGGCGTGTAAAA GTTGTGGTACACAGGAAAACGGAACTCAACAGCGCCGACGGACCTTTCAT TACACAAAACAGCCATACCAAGAAGACTACCCTTCTACACAACACGATCA GCATGAGGTAGACTACCTAAAACACGAAATGGAGGAATTGCGGCGTGATA ACAATCGAATGTTTCTCGAAACCACGTATCTACGGAAAGAAAACAATTTA TATTTGAAAAGACTTAGGGAAGAGCATATTCTGCGGGAAAGGTGAATTGA TTTGTTAATTCATTTTATGGAAATATTCTTTGAGATTTGTGACTTTCGTC AATGACAATGTGACAGAAATCAACTCAATATTAAAACCAAAAAAGCTTAT ACCCTGCCATCCCCATTGACTAATACATTATACCTGTGCAACGATNAAGC TTATACCCTGTCACCCATTTGCACTTCTTATCCCCATTGACTAATACATT ATACCTGTGCAACGATGAGACAGGAGTATTATATAAACTTCTCTTTTACA GGCTTATGCATCAGTTAGACGAACAAAGGCATCATCAACAGAACACACAA AATTCTTACCAAGATATTGATTCCCTCAACTCCAAAACACTCGACTCAGA TCTCATGCGAGAACAAGTAAGGCTTAAATATAATCTGATTTGAAAATACT CAAAGGGTTTTTACTATTTGTCATTTGGGAAATCCCCCATGAACCACAAG TGAAAATTAAGACAAAACTGTTTTGATTGTCTGTAGGCTATTTGTATAAT TATGATGTGAGCGAACGTACACCTAAGGAGCCTAGGCTGCTGGGAAGGTC TGAGACAAAAGTCACTCCCACCTTCTAACTGGAAGGCTACAGTAATCTGT AGATGGATTTGTAAGGAAGGTTACATAAATGTTCGACGAAGTACATTGAG TACTGAGAACGTATCCTCCCTTCAGAATGGTCCATGACTGGCTACTTGAG TGCGATTGGTGTAGCAACATTCCATTGGTGCAATGTTGTAACTCAATTCA GACTACTCTCGATCACAAAATATTTTCATATTCAATATTTGAATTTTATT CATTTTGACGTTTACAAAAAAGCTCACTTTTAGGGTCAACCTGGAGTTTT TAGAAGGTTTTCGATGATTCGGTTGATGGTTGAATCTTGAGACAAAGGAT TTTATTACTTTTTCTAAAGAACGCGTCATCTCTATTATTTTAAATGACCA ATTAGTGAAGTATCTTATAAAAACTCCAGCTCATCCCAATAAACTCCCAT GCTGACAAAATGACAGTCATCTACATAAATTTATTCTTGTAAGACGGCTA CAATTTACAGTCAAAGAACCCTTTTCGTAAACATTCTCAGAGGTTTAATT GGTTTTACACCTCACTGTCTGTTCTTGAAATAGCCACTGTTATTAAAACA AAGTTACCTTAATCTTTTTACTCGTATCTGACGGTATTTGCTTGTTTTTT TTGTTTTTTTTTGGGGGGGGGGNCCTAAGGTATGTTGAAACTTAATCTCA ACCAATTTCGAGAGAAAATATAAGAAAGTTGTTGGACAGCAAAAAGTATG GTGTAGCAGTGAAGATTCAAGTATAGTCAAAATGTGTATTGTTTTTAATT TTCTTTCTTTTAGTTAAAAGCGTACAGAGACGACTTCAACGAAGAAAAGA GGATACGCGAGCGATATTGCAGAAGGAATGTTGAACTAGAACATGAATTA GAAGAAGCTAAACGCACCATGGAAATACAACAGAAGAAAGTAAGTTCAAA TTTGAAGCACGTGCGTGAGATATTGATATTTTTGTCCTTGTAAAGTATTA TTTCAAAGAATCTTGGAAAAACTCAACAAGAAAAAACTAGAATTTTACCA TTTAATGAAAAAACACTTCCTCTTTCAAAACTTTCAGTTAATATGCTACG CACAGATCGTATCACAACCATTACACAAACTCGATGTACCTCTTATATAC CCCTCATCGGGCGTCAATAACAAATCTCACAGCGCCTCATCATCTCCACC CTACCCGCCTTGTCCTCAAAACAACTATAATGGGCGGACGCCACGTATCG CCCGTATAGAAACAAAGAAATATCCAGCAAGCAGTAGTGATCATATCATA GAAGCAACTCTAATGTCAGGTGATCTTCCAACAAGGATTAAACGAGCATC TTCGATCGACTCTTGTAAAGATGGACTAACAAATCCTTCATTATCTTCAA CAACGAACACAAAAACTCAGAACAGTTTTACGTGGTCCTTGCATTCTTCT GATGTAAGTAAAAATAATTATCAATAGTTCCTAAATTCCAAAGAGAAAAC CTTTACGAACAGCCTTACTAAATTTTGTTTACAACAACTTTACTAATAAA CGAAGAGTGATTAAAGACCATCTTTTTTCTTTATTAATTTCGCCTTAGCG AAAGTATTACGATAGGCATTCAGCGGCGGTGTCCTCGGACGAAAATTTAG AAAACGAAAGTACTCGATACGGTGGACGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACAATATGAGCATAT TTATTTTTCTTATAAGCATATATTTTATAAGAATCAAATCAATAACTCTT GATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAT AGATGGCAGGCAACATGAGCATATTTATNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTACAAAGTAAACAAGGGATGGCGCACAATATGAGCATA TTTATTTTTCTTATAAGCATATATTTTATAAGAATCAAATCAATAACTCT TGATAGACTGTGATACACCCTTCGGTAATTAGTTCTTACAAAGTAAACAA TAGATGGCAGGCAACATGAGCATATTTATTTTTCTTATAAGCATACACTT TATAAGAATCAAATCGATAACTCTTGATAGACTGTGATATACCTTTCGGT AGTTAGTTCTTACAAAGTAAATAAGGGATGGCGCACAATATGAGCATATT TATTTTTTTTATAAGCATATATTTTATAAGAATCAAATCAATAACTCTTG ATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGG GTTGGCGCACAATATGAGCATATTTATTTTTCTTATAAACATATATTTTA TAAGAATCACATCAATAACTCTTGATAGACTGTGATATACCTTTCGGTAA TTAGTTCTTACAAAGTAAACAAGGGATGAGGCACAATATGAGCATATTTA TTTTTCTTATAAACATATATTTTATAAGAATCAAATCAATAGCTCTTGAT AGACGGTGATATACCTTTTGGTAATTAGTTCTTACAAAGTAAACAAGGGT TGGCGCACAATATGAGCATATTTATTTTTCTTATAAACATATATTTTATA AGAATCACATCAATAACTCTTGATAGACTGTGATATACCTTTCGGTAATT AGTTCTTACAAAGTAAACAATAGATGGCAGACAATATAAGCATATTGATT TTTCCTATAAGCATATACTTTATAAGAATCAAATCAGTAACTCTTGATAG ACGGTGATACACCCTTCGGTAATTAGTTCTTACAAAGTANTAGTAAACAA GGGATGGCGCACAATATGAGCATATTTATTATCTATTACCTTTCGGTAAT TAGTTCTTACAAAGTAAACAAGGGATGGCGCACAATATGAGCATATTTAT TTTTCTTATAAGCATATATTTTATAAGAATCAANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGTCACTTGGCCAAGATTTCGTCACTTTT CCCCGACGAAGTTTTCCCTGATAAGGTTTTTTTTTCTATAAGAATCAAAT TAATAACTCTTTATAGATGGTGATTTTCCCTTCAGTTATTAGTTCTTAAG AATTAAACAACCATTGTTCGTAAATTGATCTTATCTTTTTAGCGATTTTG AGGCTTGATGTAAAGTAGACTTCAGATTAGCTTTCATTTCTAGTTCTTGT TTTTTCCCATGCAGTTTAAACTTTAGGCGAAATTTTCGACTTCAAGTCGT CTTGTTTTCTTTTACTTTAATGGGATAAATTAACGCGGGGATTAAATTTC GTGGATTTCGTGGATTCGGGTGTCATCCGTGAGATTAAGTCCAAATGGGA ATCTGGAAAAATCTTATCCTTATCGTTTTGAAAATAAAATTTTTGTCCAT TTCATTTTTTGCGGTTAAAATAGAATGTCATTAAAATTGACGTGTTTTGA GAATCATTTTAATTTCAATTTCAGGATGCTCCAACGAAATACAGTTGAAG AAGCAGAACGGCAGAGAAACGGTTGTTTTTGGAAGTAACACATCAGAGGA CAAATTGCTTGTGCATTCCCAATAAGGTGGTTCAAATAACTACAGCGTAC GGGAAAGTGTGCAGAAGGTTTCTGAGACGGAAAGTTATCAAGGGGTGATA CATTCCTCAGATATCATGATAGCGAGCAATTCAATAACGCCTCTTTGAAT ACCATAACAGAAGCTCGCACTTTCCAAAAAGAAAAGTCGAAATCCTTGTG GTTGCGATGAATCAGACACAAAGAAACATGACCAGAACGCATCGATTTGA TGGTTTTGCCGTCACAAGGATACACCTCTGTTTGTCGGGTTGAAACTTAC AAAGTTCGCCCAGCGCGTACATTTAAGATTATACCAGAGTTGTTTTTATC GTGAGTTTTTGTTCATATCAATGTTAATTTTATATTCTGTCATTAATTAT TTTACTGGTCTTTGAGCAGACTAAGTATAGTATATTGTTTTGTATCATAT TGAACTTGTACATAGATTATTGTATCGGAAGAAATTTTAAAAGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037997XLOC_037997Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060415-exon-scaffold_341-1575043694:194786..194890TCONS_00060415-exon-scaffold_341-1575043694:194786..194890Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:189362..189472TCONS_00060415-exon-scaffold_341-1575043694:189362..189472Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:184000..184268TCONS_00060415-exon-scaffold_341-1575043694:184000..184268Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:183625..183739TCONS_00060415-exon-scaffold_341-1575043694:183625..183739Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:182502..182627TCONS_00060415-exon-scaffold_341-1575043694:182502..182627Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:181988..182353TCONS_00060415-exon-scaffold_341-1575043694:181988..182353Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1575043694:178495..179066TCONS_00060415-exon-scaffold_341-1575043694:178495..179066Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:194786..194890TCONS_00060415-exon-scaffold_341-1510915933:194786..194890Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:189362..189472TCONS_00060415-exon-scaffold_341-1510915933:189362..189472Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:184000..184268TCONS_00060415-exon-scaffold_341-1510915933:184000..184268Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:183625..183739TCONS_00060415-exon-scaffold_341-1510915933:183625..183739Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:182502..182627TCONS_00060415-exon-scaffold_341-1510915933:182502..182627Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:181988..182353TCONS_00060415-exon-scaffold_341-1510915933:181988..182353Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1510915933:178495..179066TCONS_00060415-exon-scaffold_341-1510915933:178495..179066Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:194786..194890TCONS_00060415-exon-scaffold_341-1491911889:194786..194890Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:189362..189472TCONS_00060415-exon-scaffold_341-1491911889:189362..189472Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:184000..184268TCONS_00060415-exon-scaffold_341-1491911889:184000..184268Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:183625..183739TCONS_00060415-exon-scaffold_341-1491911889:183625..183739Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:182502..182627TCONS_00060415-exon-scaffold_341-1491911889:182502..182627Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:181988..182353TCONS_00060415-exon-scaffold_341-1491911889:181988..182353Clytia hemisphaericaexon
TCONS_00060415-exon-scaffold_341-1491911889:178495..179066TCONS_00060415-exon-scaffold_341-1491911889:178495..179066Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:178495..194890 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.65943e-09 0 1.34744e-06 0 0 0 0.00838701 2.06054 0 0 0 0 0 0 0 0 2.67035e-05 7.24302e-07 0 2.06453e-08 0 0 0 5.20656 7.22931 0.0435574 0 0 1.12766e-06 1.46713
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060415 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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