TCONS_00060412 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060412
Unique NameTCONS_00060412
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1597

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060412 ID=TCONS_00060412|Name=TCONS_00060412|organism=Clytia hemisphaerica|type=transcript|length=1597bp
CTAATGGTATTAGAAAAAGGCTTGGATGTGAATGAAAGCAATATTCGATT
GACATGAGCGATATGAAATATTTCGATCCACTACATTCGTCATACAATGA
AAGCCTTATTGACGGTGGCCACAATGAATTCGACCAGAAGATCAGACAGT
TCTCAAAAACAATAATGGCGTGTAAAAGTTGTGGTACACAGGAAAACGGA
ACTCAACAGCGCCGACGGACCTTTCATTACACAAAACAGCCATACCAAGA
AGACTACCCTTCTACACAACACGATCAGCATGAGGTAGACTACCTAAAAC
ACGAAATGGAGGAATTGCGGCGTGATAACAATCGAATGTTTCTCGAAACC
ACGTATCTACggaaagaaaacaatttatatttgaaaagactTAGGGAAGA
GCATATTCTGCGGGAAAGGCTTATGCATCAGTTAGACGAACAAAGGCATC
ATCAACAGAACACACAAAATTCTTACCAAGATATTGATTCCCTCAACTCC
AAAACACTCGACTCAGATCTCATGCGAGAACAAttAAAAGCGTACAGAGA
CGACTTCAACGAAGAAAAGAGGATACGCGAGCGATATTGCAGAAGGAATG
TTGAACTAGAACATGAATTAGAAGAAGCTAAACGCACCATGGAAATACAA
CAGAAGAAATTAATATGCTACGCACAGATCGTATCACAACCATTACACAA
ACTCGATGTACCTCTTATATACCCCTCATCGGGCGTCAATAACAAATCTC
ACAGCGCCTCATCATCTCCACCCTACCCGCCTTGTCCTCAAAACAACTAT
AATGGGCGGACGCCACGTATCGCCCGTatagaaacaaagaaatatcCAGC
AAGCAGTAGTGATCATATCATAGAAGCAACTCTAATGTCAGGTGATCTTC
CAACAAGGATTAAACGAGCATCTTCGATCGACTCTTGTAAAGATGGACTA
ACAAATCCTTCATTATCTTCAACAACGAACACAAAAACTCAGAACAGTTT
TACGTGGTCCTTGCATTCTTCTGATgaTGCTCCAACGAAATACAGTTGAA
GAAGCAGAACGGCAGAGAAACGGTTGTTTTTGGAAGTAACACATCAGAGG
ACAAATTGCTTGTGCATTCCCAATAAGGTGGTTCAAATAACTACAGCGTA
CGGGAAAGTGTGCAGAAGGTTTCTGAGACGGAAAGTTATCAAGGGGTGAT
ACATTCCTCAGATATCATGATAGCGAGCAATTCAATAACGCCTCTTTGAA
TACCATAACAGAAGCTCGCactttccaaaaagaaaagtcGAAATCCTTGT
GGTTGCGATGAATCAGACACAAAGAAACATGACCAGAACGCATCGATTTG
ATGGTTTTGCCGTCACAAGGATACACCTCTGTTTGTCGGGTTGAAACTTA
CAAAGTTCGCCCAGCGCGTACATTTAAGATTATACCAGAGTTGTTTTTAT
CGTGAGTTTTTGTTCATATCAATGTTAATTTTATATTCTGTCATTAATTA
TTTTACTGGTCTTTGAGCAGACTAAGTATAGTATattgttttgtatcata
ttgaACTTGTACATAGATTATTGTATCggaagaaattttaaaagctt
Run BLAST on NCBI

transcript from alignment at scaffold_341:178495..192746-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060412 ID=TCONS_00060412|Name=TCONS_00060412|organism=Clytia hemisphaerica|type=transcript|length=14252bp|location=Sequence derived from alignment at scaffold_341:178495..192746- (Clytia hemisphaerica)
CTAATGGTATTAGAAAAAGGCTTGGATGTGAATGAAAGGTAACTGAGCTG
GCGAAATAAGTATCCAGCAGTTTTTCTTCCAATGTAAATGGGATATCTAT
TATAAATTGTTCATTCAGCCAGGAAGTGATGCTTAGAGTAAACACCTCTG
TAGGTGGAGCCCCGGTGGAACTTTTTTCCTCAATGGNTGGGATATCTATT
ATAGATTGTTCATTCAGCCAGGAAGTGATGCTTAGAGTAAACACCTCTGT
AGGTGGAGCCCCGGTGGAACTTTTTTCCTCAATGGGGATAAAAATTCTGG
ATCAGGTCCGGTCCAACCGTTAAACATTGAATTTTGAATTGGGAATAAAA
TAAAAGTTAATTTCCAAATGGGGCTGAAATTCTAAGGTATTTTCCCAACG
GGAACGAAATTTTTGTCAATCTTTCCATTGGGCTGGGCTCCCAGCGGGTC
TGTGACACGGGGGTCTCTTAGTAAGTTTGCGACTGTAAACAAGAGCAACC
CGGAGTATCCATTTTGTTTAGCTGTCTATCATAAAGACGCTACTCCTACT
CCCACTGTTCTCCATTTAACCCCAGTTTGTCTCTTTAGTTACTGAACATC
AGGCAGAGAGGCACCAGATACCATTTAAGGAAGGTGCAAGCCGGCTAGGG
GTGGAACCAACAATCTTGTGAGCTGAAGCTTCATGCTAATGTCGCTAAGA
GTGACGGGGGACGTGTCGCTATTGATACTTTAGCTTCTAATAGTGATTAA
ACCGTCTAGATAACTTAAGTTCCACACTCGCTCAAAGTTTGCATGTCTGA
AATGGTTCATTCAAATATGTTTTCTTACGAAAGTATAAATCAAAACATTG
CCACTCGAAAGTCTTTTAAAGGTCGCTGCGTGATGGTTAGGTTTTTCGAA
AGATGACTTATTTGCGTGATAATACACTGTTGTTTAAAACCTCTTTAAGT
TTTAAAGTAAGTTTCGATAAGTATCTCTATATATATATATATGTGTATGG
GGATGAGTTATAAAAGTTTATTCATTTACGATGCTTAGTGAAGAATATTT
CCTAATGACGAGAAGGGGTTCTTCATTTCGATAGAGCTTGTATCGCTTGT
CTTAGATTCAGCTGAACTCGGTAAGTTTGGTTTTCTTATCCACCAATGTT
TTGTTGGAGAAAGCTTTTAAAAAATCGATTTTGTGAAACATCCGAGAGAA
ATCAAACTTATAGTGTTTTTGAGAAAAGTACGGAGAGGAAAATGGGTTGT
ATGTAAATTTGGTATAGTGGAAAAGATTTTGAAGGATTTAACGAAATGTT
ATCTTCATCACATGGAAAAGCTTCTAATCAACACACTTTTCCATGACCTC
TGCTATATAATTTGCTGTGCTGAGCTAATTACATAGGAGATTAGAGATTA
CATTTGAGAACTTGAAATGACATCTGAGTGTTTTGCTGACCCCGTGTTTA
TTCACTGAGAGCGGAACAATTTTTTGTGGATACGATTTTGATCCTTAGAA
GCAAGCAGGATTGAAATCAGATTTTTAAAAGGAGGAAGCATAGTTTGTCT
ATTGTCAGCAACGAAAAAAGTTTCCTTTTGTTTTCGAATAAAAAGAAAAT
TCTTTTTCTATAAAGTCACTACTAGAAACTAAGCAGCAACGTATTTCGAA
ACTCTCATATTTTATCTGATCTGAATAAATAATATAATAGAAAACGAAAG
GAATGTTACTACCAGGGGAGCGCGAGTTTTCATCCATTGAAACGGACAGA
CAAAGAGAAATATATACTTTCGAGTCTTCGCTTTCGAATCGAAAGATCCT
CTGGTGGAAATATTTTGGTTTCATGCAAACATCATAGAGAATCATAGAAA
GAAGTTTTATTTTCTTGTTCGATGTGGTTGAAGTTGATGGAATAAGGTAA
CGTAACATTTGGGGTAAAATGAATATATATTCCTTTTTATCATTTTTATG
AAAAATTCTTTTGTGTATAGTGCTTGCTGGGATATAGGAGCGTGTAAAGG
TTCTTGGGAAGATTTTTCAAAAAATGAGTGATCAAAAACATCAATGATTA
CCGAGTTGAATTCGTCAAAAGTATTTTATTATGAGAAACGCCTAAATCTG
GAGACTTAAAAACCTGTCGTATAATGGTATATTTTATTTTTCATAACTTA
CGGTATGAAAATATAAATTGCTTAAAGAGGCCCAAAAGGTTTTCGTGATG
GCGTGATTGGCGTTTTTTCAAGTTCGTGGGTTTCGTGATTTAAGATTTTA
AATTGTGTGATTGCGTGATAAAGTTTTATTCGATTAAAATGATTGACTTT
GATATTCATCCTAAAGTTATGTGTTTGTATGATAAAACTCCAAATTCACC
GACGCTATTATACTTCAAAACATACTTTAAATCCTTTACTTTCGAAAGAA
GATGAGCTTAATAATCTTTAGAAAGTTTAACATCATTTCAGTCCTGGTCC
AGACAGATAAACAGACAAACCAAAGTTTTGCTATATCTCTATACTATATC
TTTTTATAAGAACGGTGTTTTTCCATTTCACTATGGATATTCGTAACTTC
TTGGGAATGAAAATTATCCTTAAATATTCTACCCGTATTCTTAGTTCAGA
TCAAAATTCAACCTATAAATTTTACACGAACACTTTTAGCATAAAAGCTA
TTATTTAGGGATCACGAAAATCCCAAAAATGATATATTTTTCCCCAATTC
TCAAAATCTCAATTAACTCCCACCATCTTAAAAGTTTAATACCAATATTT
TTAGTCTCTTTAAAACTTGTAGGAACCATTAAGTGTTTGTTCTGCAGTTT
TATAACCATTTCACACTCTCTTCGTTATATTGCCTAGTTGCGTGACTTTG
AAATCTTCCCGTTCAGTAAGTGCGTATTTCAAGAAAACAATGAGATGAGA
AAACTTCCAATCGCGTGCCTTCGAAGGCAATTAAGTTATTTAAGTTGAAT
ATAAAGTATAGTGCAATTTTCATTGCACTTTATTTTAAATCTGGCTTCTT
CCCAGCACTGACGGAAACACAACAGTTTTCAATGCTCACTTAATAACACA
AATAAGAGAGATATGTCTTGAAATCCAGAGGAGTTAATGTAGTCACAGTT
TTTAAATAGAAAATGTGAAACATACCAACGAATAAACTAAAAGATGGAAA
GGAAAGGAAAACAATTTTTGTGAACGAAAAACTGATGTAAGGCGAGTTTA
CAACAATAGATTTTGACAACTGATGATAACCCTGTTTCAATTGTAATTTC
AATCTCTGTTTTCCTTCTTTTCAGCAATATTCGATTGACATGAGCGATAT
GAAATATTTCGATCCACTACATTCGTCATACAATGAAAGCCTTATTGACG
GTGGCCACAATGAATTCGACCAGAAGATCAGACAGGTTGGTACAGCTTAC
AATCTCTTTTATACATCCATTCATAAATGATCCGTATAATTTGCGGACAA
GAAATTCTATTTCATTGGTCCATTTAAGGAACTTTATTGGTACCTTTGGA
TTTTGAATCCCTAGTTTCTTTAATTGAAAATCATTTTCAAATTTATGAAG
AAGATGATCATTTAAATATTTCGATATTTAATTTGAGAAAGATGTTTCAG
CTTACAGGAGACACCAGTTCTTCCCTTGACAAGCATTCATAATTTCTCTT
TTATTTGACACTATTAAACCTAGACCAACATTCTCATATACAACAACACA
GCCGACTTACAAAACTTTAGAATTTACTTTGCGTACTCGCAAACTGCAAA
AAGAGGCTTCTGGTGGTCGCAACCGAAAATGCTAAAATAAATAAGCAACA
TTGCACAATCGTGAAATATTTGGTGTTAGGGAAATTTAGTCTCCGATTGT
CTTTTTACTTCTAGTTGCGGCTTACAACGCGGTGAGGGCCTCTTCAGTTT
TTCCAAATTTTTTGGTATTATGTCTTTTAAATGCCTCTTGACTCGAAAGT
AGAACAATGAAAAGGCTGGCTGCCAGTAGATATTTTCTGTGGTGAAGCTG
GAATTATTTTTTAACATATGATAAATATAGAATAATGTAGTTGATACTTC
ATTTGATGTTAAGATTATCCACAAAGTTGCAGGGGGGTTGGGGGTGATTC
GCAAATGTGTCTTTCACACAGCTCGAAAACCTCTTACAAGCGCTACAAAA
ATATACTTTTTCTCTAAAAGATCCAAAAGTTCGTTTTTGACGAGAAGTTT
GGAAAATTTCACAACGCTTCAAAAATCAGGTAAATTACTCAATATTTACG
CCCCAGGATGGCAAGTAAACCCGGGGTTAAAGGATCCAACACAATTTTCA
TATCGTTTTGAATCACTTTCATTTCCAAAAATAAGCAAAATTGTCAAGGC
CTTTTTTCATGATCACTCCTAGACGGCGCTAAAAGCCACTCGGATAGTCT
ACAATTCTGTTTGATTTTTTCTCCAATAAGTCAGTGAAAGTTTATTTATA
TTTGTGATTTGTCAATAAACGGTTTTCAGACCAAGGCTGTCTCTACCTAT
TGGTTCCTAAAGATTTCTGCGATAAAACTCAGTGACTAGTGAAATTATAA
CAATATCAAATACACCCCCTTCTCACAGACCCATCGTACTACAACTCGAT
GAGGACTGATTAACGATATTTTTATGACTGGGATTTAAATTCCATTTTTT
TCAAGTCAAAAAATTCAGTGGGGATAAAGAAAATCTTTCCAGTGGGAAGG
GTGTTCAAATAGGAACTTTTGCTCAATGCACAAAAAATCAGTATGAAGTT
TGATGCAGGTGCTTGAACCTTGACCACATGAAGTTTCATGAGGAACACAA
TCAAAAATACCATTGAACTTGGTCGATACATATTAGCCTTTTATCAAGCA
GCCCTTATAGGCTATTGTTGTTTTTACAGCTACATCTTAAGCTATTCTAA
ACATTATCAAAAGGTCTGAGAAAGGTCATCTAAATCATAATTGAGAGGTC
AATCACGTGGTCAAGGTTCCTTTACTCTAAATTACAGTTAATTTTAAGGT
ATTCAAGAATTTCCTTCCCTTTTCTTGTAATTGCCTCTTTCATAAATAGC
CACGAGATCGTAAAGATAAAATTGCGGAAGGTTGCACCAACCAACTGAAA
GGTCAACTTAAAGTTAGTTTCTAACGGAATAATTTTCTTCTGTGGCATTT
TTCCCTTCAACCTTTTGAACTTGAGGAACATTTAACGGCTAATCTATCAT
TATTTAGAATTGAATGCCCATGTAATTGACCCCTTGATTGTATAGTTACT
GTCAAAAACAAGACTTACTATGTAGATGATAGANTCCATGTAATTGACTC
CTTGATTGTATAGTTACTGTCAAAAACAAGACTTACTATGTAGATGATAG
AGGATCATGCAAAAAAGTTTTTTGATATGAAATTTGTTCGGAGATAATTC
AGTGAGATTTAGCAATTTAATGGGGACAATATCATGTGTAGAAGAAAAGT
AACGTAGGGAGGATTTGATTGTTAGGGACTAGGGAAAATTTTATAGCAGA
TATATATTCATTGTGTGGGTAAGAGGGCAGATGTAATAGATTTCGTTGTC
ATTGGGACGAAAATAATTTTCAACTGTGTAGATGGCCTAAATATGTATAG
CTTGAAATATGAAATCAGCATTATTGAACTATGTTTAAATATACACCTTT
AAAATTTCACATGGATTTTCAAGGGATAAAATGTTGGAACTTTTCGTATA
CGTGAAAAAGACAGATTTTTGTGGGTTGTGAGAAAAGATTCAAAAGCGTA
ATCGAAATTCAAGCATCGCACTTTTAGTATTTTCATATTTCACAGGATTT
GCCTTTTAGGACATCTTCTTTCTTTTACACCACTACTATAAATCAACTTT
TTATGGCTGAGAACTCTTTTCCGAAGTTGATGGCGAATGAAAAACAATCA
TTTCTTTCTTGAAGGAACATTTGCACAGATTTGTGTAATTATCCCCTGTA
CATTGATTAGAATAGAATGTAACAGATGATGAAATAACCTAACAATTAGG
ACACTTGTTCACTTATGTTGAACTTGTTATTCTACTGTATCAGAGTTACG
TGTAACCCAGCAAACACACAACGTTGTTTTAACGTTCAATTTACGTTATT
TGGACGTTATGAATGCCAAATGGACGTTGATACGACGTCGAGTGCCGGCT
GGGAAGGGTCGTAAAGAAATTCCAGGTCCACTACACGGGTAAAAATGAGT
GATACTGACATTTTAGGGGAAGGTTCATTTCTCGATAGAATACAACCAGA
GGGGTAAATGTGAGATTGAGAGAGATAAAAAGGATTAACGAAAAATAGTT
TCTGTTCCTTGACGATAACACGTTTCAGTTACTGTGGTTTTCACTCTCTA
AATTCATTTTTTCCATGTACAGCTTGCGAAAGTGGGAAAAATATTGAAGG
AGATGAAATGTTTTATACGTGCGATCATCTTATTTACTTGGAAAGCTTTT
TTCCAACGTTAGATGGATGTTATTTTAACGTTGGGGGATTTTAGATTACA
TCTATTCTTGATATTCATGACGTAATCTTTTATACGGAAATACCTGAAAA
ACACCGGGCGTTTGCCACCAGTCTTGAATTAAAACAATGAAACTGGTAGC
AAACGCCCGGTGTTTTTCGTGTGTTTCCGTATGAAATATTATGTCATGAA
TATCAAGAATTGTTTTGTTGTTTTGCAGTTTGAAATGGAAGGCGGATACT
TAGGCAAAGACGGGTGCCGGGTATGTGCAGACAATAAGGGCCTGTTTTTT
CACCTTCCAAAGTCTCTCTAAACAGAAAATTTCAAAGAAACTCCTCTAAG
GGTCAGAAGACTCACGATAATTTAAGAAAACATTTTTGATTTTGAGAGAA
AAATTTGTAAAAAAGTCTCTCTAAGAGTCGGTTTTTGTTGGTCCCGCACA
CACCCCTCATACGCCAACCCTAGTACCCTTCCGGGGGTTTTCTCAAACTT
AAAGTAACGTTGGCTGTTAATAAAAGTTCAGTACATTATAGTTTCATTGA
GGGATAAAATTTGAGAATTTTTCTCTCGCCAGGGAAGACATTTTGGTAAA
TCTTTTACAATATTGGAGACATTTCGTGGTTTTGTTTCTCTAGTAGTTTC
AGACTGGATTAATATTTAAATTTATAAAATGAAAAGATAAAATGAAAATT
CNAATATTGGAGATATTTCGTGGTTTTGTTTCTCTAGTAGTTTCAGACTG
GATTAATATTTAAATTTATAAAATGAAAAGATAAAATGAAAATTCTGAGA
ATTTAGCATATTTTGAACGTCATCGAAAGAGTAGAAAGAAAAATGAAACA
AAAGAAAGGCGAAGACAATAACAATGAAATGAAGTTGCTGTGTCACAGTA
CAAAAGATGCTGTTCTTCTTAAGATACGTAGTTTTGTAACTATAATTTCT
CACTAAAAAAGCTTTTGATTGATAAAGTGAAGTGAACAGTAGAAGCCTTG
AGGATTTTAGCAAAGCCTTATTTCCTTTTTTTAGAAACAGCGTTATTTAG
TGCTTGCTAATTTGAAAGAGAAGAATATCAAGGGAGCGTTATATTTGATG
AAAAGTTAAAAGAAACAGTCATGGAAAGTAAAATATTGGACTAAAAAAAT
TAAGAAGAAGATTAATATTCTCTTATTTACTTGTTACACTTTGAGGGTAT
TTGTTCTATTGAAACTTCACTTTTTTTGGAATTGAGAGAAACGCAAATTT
CGGCCGTTAAACATCGAACAATGAAATCAAGAAATAAAGTTCTAAGGGAC
ACGTTGTATACCGCTGTTGTTGTAGGTATATTTACGAGAAGAAGACTGAG
AAGTAGAAAAAGTTTGGCTTGGCTGTTATAGAGTTAAACATTTCATCTTT
TTTTATCCTTAATTCTTTTTACTTAAAAAAGAACTTAGAGTTGCCAAGGT
AGGCAAAGAAGATACATCGTTTGAGGGGCTGTTTTTATTATGGTGGCCCG
GTTTACGTCACAGTCTTTGACAAATCAAATGGCTAGAAATAGATCACGTG
ACGGTCGAAAATTATCGCACAACACCTAGCATGAACATTCCCTTATTCAA
GAATAGTGAAGCGAGTTTTCTGTTCTGAAATTTGACATAGTTGACAGTTC
CCATCTCATTTTTTTCTGTTTCTGGGATAGAGCCATACGGTTTAAAAAAA
GTGAAAAAACAAAACAGATATTGCAAAACGGTAGGTTGAGGGAAAGATAG
CGTCATAGGATTTCAGAGTTTTATCCCCGTGAAATACAAAAGTAAAATCT
GGTAGAATCTTCGAGAATTTGATCAACTTTTTGATGATTTTCGTTCATGT
CGACATAATCATGGTTCCACGGTGTAAACAGATTTCTCCAATTCAGGAAA
ATCTTACTATTTATTGTCGCTCTTATCAGATTATCTTTCTTCTTTTTCAA
GCCTAACAGGAGCTTGGCTCATTTTGATATATTTTCGGATCAACCCCAAG
TTATCTCATTTCTTATTATTCTTTCTAGTTCTCAAAAACAATAATGGCGT
GTAAAAGTTGTGGTACACAGGAAAACGGAACTCAACAGCGCCGACGGACC
TTTCATTACACAAAACAGCCATACCAAGAAGACTACCCTTCTACACAACA
CGATCAGCATGAGGTAGACTACCTAAAACACGAAATGGAGGAATTGCGGC
GTGATAACAATCGAATGTTTCTCGAAACCACGTATCTACGGAAAGAAAAC
AATTTATATTTGAAAAGACTTAGGGAAGAGCATATTCTGCGGGAAAGGTG
AATTGATTTGTTAATTCATTTTATGGAAATATTCTTTGAGATTTGTGACT
TTCGTCAATGACAATGTGACAGAAATCAACTCAATATTAAAACCAAAAAA
GCTTATACCCTGCCATCCCCATTGACTAATACATTATACCTGTGCAACGA
TNAAGCTTATACCCTGTCACCCATTTGCACTTCTTATCCCCATTGACTAA
TACATTATACCTGTGCAACGATGAGACAGGAGTATTATATAAACTTCTCT
TTTACAGGCTTATGCATCAGTTAGACGAACAAAGGCATCATCAACAGAAC
ACACAAAATTCTTACCAAGATATTGATTCCCTCAACTCCAAAACACTCGA
CTCAGATCTCATGCGAGAACAAGTAAGGCTTAAATATAATCTGATTTGAA
AATACTCAAAGGGTTTTTACTATTTGTCATTTGGGAAATCCCCCATGAAC
CACAAGTGAAAATTAAGACAAAACTGTTTTGATTGTCTGTAGGCTATTTG
TATAATTATGATGTGAGCGAACGTACACCTAAGGAGCCTAGGCTGCTGGG
AAGGTCTGAGACAAAAGTCACTCCCACCTTCTAACTGGAAGGCTACAGTA
ATCTGTAGATGGATTTGTAAGGAAGGTTACATAAATGTTCGACGAAGTAC
ATTGAGTACTGAGAACGTATCCTCCCTTCAGAATGGTCCATGACTGGCTA
CTTGAGTGCGATTGGTGTAGCAACATTCCATTGGTGCAATGTTGTAACTC
AATTCAGACTACTCTCGATCACAAAATATTTTCATATTCAATATTTGAAT
TTTATTCATTTTGACGTTTACAAAAAAGCTCACTTTTAGGGTCAACCTGG
AGTTTTTAGAAGGTTTTCGATGATTCGGTTGATGGTTGAATCTTGAGACA
AAGGATTTTATTACTTTTTCTAAAGAACGCGTCATCTCTATTATTTTAAA
TGACCAATTAGTGAAGTATCTTATAAAAACTCCAGCTCATCCCAATAAAC
TCCCATGCTGACAAAATGACAGTCATCTACATAAATTTATTCTTGTAAGA
CGGCTACAATTTACAGTCAAAGAACCCTTTTCGTAAACATTCTCAGAGGT
TTAATTGGTTTTACACCTCACTGTCTGTTCTTGAAATAGCCACTGTTATT
AAAACAAAGTTACCTTAATCTTTTTACTCGTATCTGACGGTATTTGCTTG
TTTTTTTTGTTTTTTTTTGGGGGGGGGGNCCTAAGGTATGTTGAAACTTA
ATCTCAACCAATTTCGAGAGAAAATATAAGAAAGTTGTTGGACAGCAAAA
AGTATGGTGTAGCAGTGAAGATTCAAGTATAGTCAAAATGTGTATTGTTT
TTAATTTTCTTTCTTTTAGTTAAAAGCGTACAGAGACGACTTCAACGAAG
AAAAGAGGATACGCGAGCGATATTGCAGAAGGAATGTTGAACTAGAACAT
GAATTAGAAGAAGCTAAACGCACCATGGAAATACAACAGAAGAAAGTAAG
TTCAAATTTGAAGCACGTGCGTGAGATATTGATATTTTTGTCCTTGTAAA
GTATTATTTCAAAGAATCTTGGAAAAACTCAACAAGAAAAAACTAGAATT
TTACCATTTAATGAAAAAACACTTCCTCTTTCAAAACTTTCAGTTAATAT
GCTACGCACAGATCGTATCACAACCATTACACAAACTCGATGTACCTCTT
ATATACCCCTCATCGGGCGTCAATAACAAATCTCACAGCGCCTCATCATC
TCCACCCTACCCGCCTTGTCCTCAAAACAACTATAATGGGCGGACGCCAC
GTATCGCCCGTATAGAAACAAAGAAATATCCAGCAAGCAGTAGTGATCAT
ATCATAGAAGCAACTCTAATGTCAGGTGATCTTCCAACAAGGATTAAACG
AGCATCTTCGATCGACTCTTGTAAAGATGGACTAACAAATCCTTCATTAT
CTTCAACAACGAACACAAAAACTCAGAACAGTTTTACGTGGTCCTTGCAT
TCTTCTGATGTAAGTAAAAATAATTATCAATAGTTCCTAAATTCCAAAGA
GAAAACCTTTACGAACAGCCTTACTAAATTTTGTTTACAACAACTTTACT
AATAAACGAAGAGTGATTAAAGACCATCTTTTTTCTTTATTAATTTCGCC
TTAGCGAAAGTATTACGATAGGCATTCAGCGGCGGTGTCCTCGGACGAAA
ATTTAGAAAACGAAAGTACTCGATACGGTGGACGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCACAATATGA
GCATATTTATTTTTCTTATAAGCATATATTTTATAAGAATCAAATCAATA
ACTCTTGATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTA
AACAATAGATGGCAGGCAACATGAGCATATTTATNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTACAAAGTAAACAAGGGATGGCGCACAATATG
AGCATATTTATTTTTCTTATAAGCATATATTTTATAAGAATCAAATCAAT
AACTCTTGATAGACTGTGATACACCCTTCGGTAATTAGTTCTTACAAAGT
AAACAATAGATGGCAGGCAACATGAGCATATTTATTTTTCTTATAAGCAT
ACACTTTATAAGAATCAAATCGATAACTCTTGATAGACTGTGATATACCT
TTCGGTAGTTAGTTCTTACAAAGTAAATAAGGGATGGCGCACAATATGAG
CATATTTATTTTTTTTATAAGCATATATTTTATAAGAATCAAATCAATAA
CTCTTGATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTAA
ACAAGGGTTGGCGCACAATATGAGCATATTTATTTTTCTTATAAACATAT
ATTTTATAAGAATCACATCAATAACTCTTGATAGACTGTGATATACCTTT
CGGTAATTAGTTCTTACAAAGTAAACAAGGGATGAGGCACAATATGAGCA
TATTTATTTTTCTTATAAACATATATTTTATAAGAATCAAATCAATAGCT
CTTGATAGACGGTGATATACCTTTTGGTAATTAGTTCTTACAAAGTAAAC
AAGGGTTGGCGCACAATATGAGCATATTTATTTTTCTTATAAACATATAT
TTTATAAGAATCACATCAATAACTCTTGATAGACTGTGATATACCTTTCG
GTAATTAGTTCTTACAAAGTAAACAATAGATGGCAGACAATATAAGCATA
TTGATTTTTCCTATAAGCATATACTTTATAAGAATCAAATCAGTAACTCT
TGATAGACGGTGATACACCCTTCGGTAATTAGTTCTTACAAAGTANTAGT
AAACAAGGGATGGCGCACAATATGAGCATATTTATTATCTATTACCTTTC
GGTAATTAGTTCTTACAAAGTAAACAAGGGATGGCGCACAATATGAGCAT
ATTTATTTTTCTTATAAGCATATATTTTATAAGAATCAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACTTGGCCAAGATTTCGTC
ACTTTTCCCCGACGAAGTTTTCCCTGATAAGGTTTTTTTTTCTATAAGAA
TCAAATTAATAACTCTTTATAGATGGTGATTTTCCCTTCAGTTATTAGTT
CTTAAGAATTAAACAACCATTGTTCGTAAATTGATCTTATCTTTTTAGCG
ATTTTGAGGCTTGATGTAAAGTAGACTTCAGATTAGCTTTCATTTCTAGT
TCTTGTTTTTTCCCATGCAGTTTAAACTTTAGGCGAAATTTTCGACTTCA
AGTCGTCTTGTTTTCTTTTACTTTAATGGGATAAATTAACGCGGGGATTA
AATTTCGTGGATTTCGTGGATTCGGGTGTCATCCGTGAGATTAAGTCCAA
ATGGGAATCTGGAAAAATCTTATCCTTATCGTTTTGAAAATAAAATTTTT
GTCCATTTCATTTTTTGCGGTTAAAATAGAATGTCATTAAAATTGACGTG
TTTTGAGAATCATTTTAATTTCAATTTCAGGATGCTCCAACGAAATACAG
TTGAAGAAGCAGAACGGCAGAGAAACGGTTGTTTTTGGAAGTAACACATC
AGAGGACAAATTGCTTGTGCATTCCCAATAAGGTGGTTCAAATAACTACA
GCGTACGGGAAAGTGTGCAGAAGGTTTCTGAGACGGAAAGTTATCAAGGG
GTGATACATTCCTCAGATATCATGATAGCGAGCAATTCAATAACGCCTCT
TTGAATACCATAACAGAAGCTCGCACTTTCCAAAAAGAAAAGTCGAAATC
CTTGTGGTTGCGATGAATCAGACACAAAGAAACATGACCAGAACGCATCG
ATTTGATGGTTTTGCCGTCACAAGGATACACCTCTGTTTGTCGGGTTGAA
ACTTACAAAGTTCGCCCAGCGCGTACATTTAAGATTATACCAGAGTTGTT
TTTATCGTGAGTTTTTGTTCATATCAATGTTAATTTTATATTCTGTCATT
AATTATTTTACTGGTCTTTGAGCAGACTAAGTATAGTATATTGTTTTGTA
TCATATTGAACTTGTACATAGATTATTGTATCGGAAGAAATTTTAAAAGC
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037997XLOC_037997Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060412-exon-scaffold_341-1575043694:192709..192746TCONS_00060412-exon-scaffold_341-1575043694:192709..192746Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:189362..189472TCONS_00060412-exon-scaffold_341-1575043694:189362..189472Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:184000..184268TCONS_00060412-exon-scaffold_341-1575043694:184000..184268Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:183625..183739TCONS_00060412-exon-scaffold_341-1575043694:183625..183739Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:182502..182627TCONS_00060412-exon-scaffold_341-1575043694:182502..182627Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:181988..182353TCONS_00060412-exon-scaffold_341-1575043694:181988..182353Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1575043694:178495..179066TCONS_00060412-exon-scaffold_341-1575043694:178495..179066Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:192709..192746TCONS_00060412-exon-scaffold_341-1510915933:192709..192746Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:189362..189472TCONS_00060412-exon-scaffold_341-1510915933:189362..189472Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:184000..184268TCONS_00060412-exon-scaffold_341-1510915933:184000..184268Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:183625..183739TCONS_00060412-exon-scaffold_341-1510915933:183625..183739Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:182502..182627TCONS_00060412-exon-scaffold_341-1510915933:182502..182627Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:181988..182353TCONS_00060412-exon-scaffold_341-1510915933:181988..182353Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1510915933:178495..179066TCONS_00060412-exon-scaffold_341-1510915933:178495..179066Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:192709..192746TCONS_00060412-exon-scaffold_341-1491911889:192709..192746Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:189362..189472TCONS_00060412-exon-scaffold_341-1491911889:189362..189472Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:184000..184268TCONS_00060412-exon-scaffold_341-1491911889:184000..184268Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:183625..183739TCONS_00060412-exon-scaffold_341-1491911889:183625..183739Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:182502..182627TCONS_00060412-exon-scaffold_341-1491911889:182502..182627Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:181988..182353TCONS_00060412-exon-scaffold_341-1491911889:181988..182353Clytia hemisphaericaexon
TCONS_00060412-exon-scaffold_341-1491911889:178495..179066TCONS_00060412-exon-scaffold_341-1491911889:178495..179066Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:178495..192746 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.160206	0.77879	1.61258	0	0.294696	0.298072	0.737438	0.396657	3.02362	2.2578	2.01874	1.18756	2.50394e-07	8.18012e-07	1.71757	1.5458	1.97025	0.843952	0.0523742	3.93227e-07	1.37421	8.6285e-07	1.14139	3.74154e-07	0.853158	1.45736	0.39842	4.47113	1.12709	1.56609
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060412 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top