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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060403 ID=TCONS_00060403|Name=TCONS_00060403|organism=Clytia hemisphaerica|type=transcript|length=910bp
taaaaatgtgACGTTGGAGAGACTTGATATGTAAAATGTCacgattttac
aaattattgtttttggtaattttgatgTTTCCGTTATCATGCAGCAGTGA
TGATGATCGCAGAAAACTCGACCAGTTTTGCATGACATGGTGTTCTTGTA
GACCTCATACAGatatGAAGAAAGGCGGCTCAAATAAAACTACCATGGCT
CCAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCG
TTTACCCAAATACATTAGACCCATTCATTATGTAGTGGCTTTGGAAATTG
ATATGCAGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACCGAAGTC
TCAAAACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAATAATGT
TAAAGTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCCTTGAGA
AAGAGCATGGTGATAACGGCGGCTTTTTATAcaaacaaaatctttatttt
gttattgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTTGGAATT
CAAATTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATTTGTCTA
CTTACAATAATACAAAGGGTCAAATTGTgAAAGTCGCCGCTACGCAATTT
GAGCCTGTGGATGCCCGTTCAgcattcccatgttttgacgaACCAGCTAT
GAAAGCGACTTTTGATATCTCAATGAAACGAGATAAAAGTTATCTTGCAT
TGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGATGAAGTGACC
AATTATTTCCAAACAACTCCCATTGTATCCACTTACTTGATCGTCTTTGT
GATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATACTAAGGTTCCTA
CTAAcgtaag Run BLAST on NCBI transcript from alignment at scaffold_341:479595..492654+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060403 ID=TCONS_00060403|Name=TCONS_00060403|organism=Clytia hemisphaerica|type=transcript|length=13060bp|location=Sequence derived from alignment at scaffold_341:479595..492654+ (Clytia hemisphaerica)
taaaaatgtgACGTTGGAGAGACTTGATATGTAAAATGTCacgattttac
aaattattgtttttggtaattttgatgTTTCCGTTATCATGCAGCAGTGA
TGATGATCGCAGAAAACTCGACCAGTTTTGCATGACATGGTGTTCTTGTA
GACCTCATACAGGTAAAAATGATGAGAATTCAATAGATAGAGTTCCTATC
AAGGCAATCTggtacaccccttctcacagaccagaTAGGTTTTTTAGCca
atgggggtaaaaataaggGAGCAAAACTCGATGGACATTGATATTCCCGT
GTTTTTTATGGCTCGGgatataaatttcatttttttcaagttagaaaatt
cagtggggatggaaaaaacagcacaatattttgcagttaggatttgctta
tctgattttTCAGCGTAGACAAAAactagagtataattttccactaaGGA
CAacatttggccaatttttcctgTGGGAAGTGgtcctagtgggtctgtga
gaagagcaACTCGATCCGCTTTTTTATCTTACTGATGAACGTGAAACAAT
CCTTTTCGCAAAATGAACGCTTAATCATAATCATAAAAAAAGCGACGTTA
GGGTTTGGGTTTGAGTTTGGTTTAACATCCCTTTTTTAAGAGTCTTATAA
TAAGTTATTAGCCAGAAAGCATGAAGAAATTCTCCTCATTTCATCCATCC
CTAACAATTCTTAGTCTCTGGATACGTTTTAAAGTTTGGCGTTAACGAGA
TGGTTTATCGTGGCGCGATGGTGCGAATTTTCAAAGAATAATTGATTCTT
CGTTCGAGCCCAGAGGGTCTCGTTAGTTTTACGCCTCAACCCTTCAAACC
CGAGTGACGTGTATACACGTTCTAAATTAGCCAATATACCGAGTCCCACA
CTTAAGGCTATAACTCCTGATCACTCGATTTAAATGGGcataaaccaatt
ttttttataaagatataaaaatgcCTTTTCAATGGTGCCAAAATCATTGT
TTAACTCTCaagttacaagcttttatgtaaagttgaaatttggaattaaa
aaaaaaagttaagaaatttcaaatttttcaaaaaatttgctgGAACTAAG
TTAAgttttaaacatgtttttttgaCGACTAAACCGCAGGTGgatttcgc
aaaaaaaaaaaattagccgATTTGGATGTTTTGAAATGCGTcgcaaaaac
acgtcaaaagGTTTtaattcaaatgacgtcatcactgaaaaaattaattt
ctattAATCAATAAAAATGCAATcaataccaaattttgactggataTGAA
TTTTTCGACATTTTAATATTAGCtgaatttaaacttttcaaaatctttgt
gtTGATATGCTTCTTTTGCTGACCCTTTATACGAAGGTTAAGGAACAAAG
GAAAGTGGTCGTGCACGTCACGCAAAAAGATGTTTAAGACCAtcttcaga
cgttacggttctaTATTGTTCCGAAACAAAACGTTTCCGAAATAAGCGTG
AACGTCCAAAATTCGACACGTCAAAGAAAaaagatcgaaacggtttcgct
ctcCACTATTTTTATTGGAACGGAACTGtctgttttcttgctccgaaacg
ttccgaaaccaatatgaacactctcgatccgtaacggaAATCATACCGGA
CCGATacgaaccgtaacgtctgaacatggtttATTTAAGTCTTGACCGAA
CTCACCTGTGATTGATTTTGATCAAATCTATAAGGTAATAACAATTTGAC
ACACTGTTAAACAACGGTTTAAAGCAAAACCATACATAAGCTTAATGGTC
CGGCTAGACTTTTTTTCATAAACTTATAAACAAGACGAAAGGAAGCTTCT
ATACGTCTTTTAACAAACCGATtattttggatgaaatttctATGGTCTAG
TGTTAAACCGAAAACTAAGGAACTTGAttgcaaaaatttaaaatgaatgA
AACTTGTGGTATAAGATTTTTGTTTTTCGTACTTATCATAAACGGTACCA
TTTGCAACGTTGCCAACATTGATAATGTTGTTGATAAAAAATGCAAATCG
AACGAGTTCAGATGTCGTTTGTGTGAATTATTGTACCAAAGAATTTGTCA
ATTATCTTCAGGTATAGATTTTACTGCTTTTTAAAATCGGTCAATACTTT
GGGATATGTTAATGAATGGGTCTCTCTCAACAACACGGCCGGTGTTAACA
GAAGAAGGATATTCTCTATATCTATATCTATAGTGTAGGTATAAGCCCCA
ACAAAATACAAATGGTGTACATCACTAATCCTAACTAACCTCCCACAAAA
GGACCACCAACACCAtatcataccgccaggaggaaggaaccccAAATAAG
ATAACAAAATGAGAATAATGAGTCAACTGATGCCTGCTGAACTTATGCTC
ACGAAGATGACTGAAGTGAAACCAACCCTTTATCGTATTCTTAGCATCAT
AGTTCAATTTAGCGGCGTTTAAAAAggcgttgtggtatagtggacatcaa
ccttgattcctgtacagaCGACCAAGGtccgattcccactcacaacggtt
cacttggcaagtgagcAAACCTTCGctcgggtcaacccatgccatgtgag
gggagttgggtagtcagttcaaggtgctgacgggatgcttactcaaagca
tctatagttgcaaGAATGGActcccagagcctcctgtaactcaaactcaa
ccataatagataGAATAGCCAATAGCGGCGTCCAATACATCGAGTTTCAA
CGGGCTCTACAGTCTACACACGGAGATACGGTCGCTTATGGGCGGAGGCG
GTTAGAAAAAGGGTGGAGTAGTTTTGGCTCCGCCCGAATTCAAAGAATTC
TCAGGTGTTTATCACTGGCCGTATTTACCCTGGATCCAATACTATTAAAA
ATTCATAGGAACGTGTGAGCAAtgctaaattttttgttttgaaagtcgcg
cactttcgtttttgttcattcacttttttgattttttttgctgtagACGC
AGAGGGGTACAGCGACAGAACTTGGTTGGTTTGGACCTTATAAAAACTTC
TATACTCAGACAGATGCCTGCTTCGTATCTTGTGTTCGTTGTAGACTTCT
TCCATTGGATTATCACATAATACATTAgtacatttttatgacactgGCAA
TATTCACAGTTTAGTCTTGAGGgctgatgttttttataaaaaatgtacag
AAGCTTCTTGTCAACTGCTCTTGTTAGGATGATTGATCGCGTTAAAtttc
tttgacaacaaatttgattcgataactccaccaagtttatcaatcatact
ttctgtcgtaacaactttcactgatagcgggcgcggcgccctttttaact
tttttgttttcattcaaaatgaaaaatgaccgGACTCCGATTGGAGGTTC
ACAgaagtagtagtagtagtagtagtagtattttatttttcatgattgta
GTAGTAAATATGATACAAGGTTTTATGTTAAATTATATAATAAAACTAAA
CAATGCTAGAATGGAGACTTCATATTAGCAAGCTATTCGAGAATGGGCCA
CCTTTTTGTAATTCCAAGGAATACTAGTATAATTAGGAAGAATTTCTTAA
ACTACTGAACACGTAAAAGTCTTAAAACagacaaataaaaatgaaggNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTGAAAGAGGGC
CTGAAAAGAAGACGCACTGATTTCCCTCTGgttctttgtttatgttgatA
AAAGTTTAGAGAGAAGAGATTCTTGAGTCTAATTGGAGAAAAACCACATA
AGATCCTGTGAGCAAGAGTTATATTTAGTAGATTTATGTGATcagaaatt
ttaagaagattaaGTTCATAAAAGATTTTACTAGAGTGAGCattgaaatc
agaaaaagtCATGATTCGTTTGCATCGTTTTTGAAGTTTAAAGACTCTTT
CCACATTATAGTTATGTTTTTGACCCCAGATTTGGCAAGCATAATTAAGA
TGCGAAAAAAATAGAGCATAATAAATCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGAAAACTGGGATTACTTTAATAGTTTTAAGG
GAGTTTGGAAAAATTCCAGTTTGAAAAGTGAGATTTaggattttttctaa
aatagttGCAAGGGAGTCTGGAACTATGTCAAAAATTTTACCAGGAATAC
TAAAATCACCTGAGCTTTTACTGTGATTTAgggatttgaaaatgtttacc
tTGTTAACTAGGGTAAAGAAAAATGAGTTGCCTGATGTTGGTCTTTTTAT
GTATTCTTTAAAATCTCCAATGTTTGGTATCTCAGCTTGAATTTTAGTTG
CTATGGTAGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGATTGAGTTTCtataaaatttgtatttttgacgTAGGTTA
GCTTCATTGATTGGATCTTTAGCATTGatggatttttttaaaagtttatc
tCTGACTGACAGAATGCCCAGAACGCCCGCTGCCTAACTGCCTATccccc
gatgggattaacaaataccgtgaagtcgggtaacttgcatcagtggaggc
taacatagccctcaaatgaatgacctggctagtcatgcattaaaataaaa
ttaatcaataacaaaaatggtagagtagagctgcgagcggagctgcatag
ttcatttgttttgaaattttgctgctttgattggtcagtcatttgatggc
gatgcatgttagcctccactgatgcaagttacccgacttcatggTAACAA
GTGTGTAACTTACCGAGctcaagtgacgtcaaacgctccatcgttttgcc
acttatttggtcttcttcgttccagacattcgcgtgtgttccactacgga
ttttttcatttttcgatttAAAACCCTACTGTAAgtaaagaaattaaaaa
gacaacttatgtgagaatgttgagttttgtttatatggcagtTTGTGATG
GACTGATCagtgatagaccttttttcaaagaggccatcctgttgaataat
tatgtactccagcagaaaaacaatgatacaaccATGCATTAATtattaaa
atatgcatgatacagtaattatgcatggctgtatcattgtttttctgctg
gagtacataattattcaacagggtggcctctttgaaaaaaggtctatcac
tGATCAGTCCATCACAAactgccatataaacaaaactcaacattctcaca
taAGTTGTCTTTTTAATTTCCCAAATTTCGTCgtaagcgttcacttccac
aataatttatgtaattgcaatttcgaTCAGTCCACAGTCAGGTTCAACAT
ATACGCGTGTTTTTATTCATGTGACCGAAGTGAAAGCAATCCGGGGGTga
gtggcgaagcaacacagcagattaatcataaagtaaagaaatatcttttg
gcattgacaataaAGTATAATATATTACAGCTTACATTATAtctccttaa
ttcaaaaatcaaaaattcatttcgcATTcgctaaaaaagaaaataataat
aatgaattGATATTATATACTAAGACGCCCCTGTCTTTTACTCTCGTCTA
ATTTCCCATCTTGGAACGTgaaaaacgcccgtccgcccaatatccaccta
ATCACCTTGAATttactttaattgtcctttgacttccaaaaaatagtatt
taaaaactatgaatttataataattacaaaaaacaaaaagtttgatactt
cattagtgaaaaatacaataaattcctagtttcaattctcaatgggcgtt
tttctagcgcttcgtttatcgcgcaatttttgcgtcacacaaactttctc
gaccgctcgtaataattctccattgtcaagtcaggatcgatggtgacgtc
acctaagcataaaaaagaaagaatttcgtcagttttatgcatatattaat
ttgcgagatattctattcgccgtgCGAttgcacttttcgtagactagtcg
gaatacctTCTTTTACttgcgggattgatggtaacttttcatcttcgtta
ttttttaaatgaagcacaaccgaaaaaaagcaaaacttcAGAAAGCTGca
tatttccagtgagtaaaagattctgacaattaacataattgatgatgatg
atttttttcggtcaggcaaatgtctcgtattgggggttctagtcttgacc
cctaagcctacgcaagattgaagcgtttgggtaaacgagacaaaactcca
aaaaagctggtgttttgaagcgcttctgTGCGATCGAAATATTGCTCTTT
GTGACGCACTGCTGATAtatagagaaaatttttttcctctctgaagctaa
gaaaagaaaattagtttcaatcagagattctgaccttcctatattattcc
tatctgcaaagaagggtgtcgaaattagaagagggatgtcgttgaccaac
ttacggtactcggtgcgaaagagaaattgtgtaccattcattaactcaaa
tcgaatgactttggaggtttgttgaaatggtggccaaattgccgtcccat
gttttatcaaattgtcccaagttagagcagttgactgTAGCTATACATTG
GGCTaatccatttttaaaccatacatgGGTATTATTGACGATTTGTTCCA
GGGGGggtctgagccttgattttccaaggggtttttgctcatttttcaga
ttttccaaggggctTATTAAAGGTTTCCACGGGGTTCTCTCCTCATAAAC
TGATATCAATAGTCATTTTCcaggccctttttcacaaaatttcactttcc
agggACATGTCAGCTCCTAATTTCCAAGGGATTagtttgttatccaaaat
ttccagggagggggtagtgaaaaaagttcgtcaatacccctgtacaattt
ttttttggaatactGTAGCccaatttttttacatttttatcatcatcaag
GGGTTCAAGATTGCCACATTTTACACAGCCTTTCTTTTATGGCGATTGAG
GCCTTTCAGTGTCTTGCCTGaagggcggctgtaaaatctcaCCCTTCATA
AAACACCTCTTTTACATTAATTTGGTCtgatgtcgacatccctcttctaa
tttcgacatccttcttccGTCACCTAATGCAATGTAAAAATTATGgtagt
tttcagtttttgagacatgccatttAACCTCCCCGAGAAGGGAACTAGAC
CtcacgagttaggctaactgttatgatcACAAATCCTCAAAAGGAGCCCC
ATCCATGAATAAATCCTGGGATGGTGCACCAACGACTGGGTGTATAGGGG
TCACTCTCCTTTGTTCCAGGAACAAGCTCACTAATTCTTAGGGGTGTGTC
TACTATAGGCTCTGCCTCCCCTGCTGCATGAAATTTGCATCTTCTTTATT
AAAGAATTTACCTGCTTCTAGATTGATATTGACACCTGCCCTTATGCcta
aaattgttgtttttggCAATCTTTTTCTGTTTATTGCAAGGTAGGAAAAG
CCAAATGTATTCTTTAACTTGCCAGATGGCATTTGTTgatgactttaaaa
tttggtcaattgCCTATAAAGGTCTATGGTTAGCTATCGAAAAATAATTC
TAACATTTTTCTGAATGAGCCGACTCTGGATTTTTGACCTGGAggtaaaa
aaagttagaaagtctctgtaagggtcaacaggtttttttccttttttggt
tctctttcagaaaaaccaaatcCAATTAAATCATTCTTGAGATTGTTGTT
GAGGCACTAGATATTGGAGACTTTTTATAGCATTATTTAGCTGTTCACCT
GATTTTTTGTGTTCAACAAATTTGTTAACATAAATCTAAAGTATAATGAG
ATTCCAGACAAAATTCAATCTGTCTGTAACTTAGGCTAGACTTTCCTATC
CTAGCTTGCTAAATTTTATCATatgcaatgaaaaatgcaaAGACTTAATT
ATCACAACAAACTTTTACCTCTACAACAATGATCAAATCATTTAAAATGT
CTAAACATATTATCAGTTGCTTATCGTTTATTGAATAAACATCAAATCTC
AAATGATATCCCTCTTTCAGATAatcatatatttttaaaaaggaaatcAT
CTATGTTGATCCAAATCTGAAATACAAACAAGATTTTGTAAAATCATGGG
AAATCCATCAATTAAGACACAAATCTATACATTTATGAGCTGACATTGTT
GCAAAGTGTGTTTTCATTATGgcagaaaaatatgaaattgaagagaattc
ttcatTGACATTTCAAGACTCTCCACGTCACAAGAAAGGATTTTTTATTA
GCAAAGGCCAACTTATAGTCTGCCTTTTAGCTGTGATATGCTTGATAATA
ATTATAGCTGTACTGTCTGCTACATTCAGTTGGTATGCAGCCAAGAATGA
TAATACTAATGGGAAGTCAGGTACTGTATAACTAGTTTCATAAGACctgt
attttttttatttttttggtctATGAACATTTGCAGATGatctttcattt
caaatttaatcATCATTTGCTTATaatgattaaatttttaaaacaattgc
gtgattgtgtgaatgggaaagctttgcgtgaacaaaaatttcgtaaattg
tgaaaaaacattgtgtgaatgtgtgaatttgggaaaaaaatttgcttgat
tgcatgaattgaaggtccgctaggggggggggctcataaAGGAAGCATGT
TAGATAGAATTATGGTCATACCGTAAAATCGATAATCAATTAAATAGTTT
CTGTTGGGTAATGTGTCAAAGTTACGGTGAAAggaattaaattaaagaga
aaatgtttttagctATAATAACTATTTTCCTTCCTtaataaaataaagtt
ttgtgAAACAATTTCTCATTCATTGAAAATCAGACAGGGTCTTTGCAAAT
AacaattttatctcatttttgcAAATAACAATTTAATctcatttttgcaa
aaaacaatGTTTTCTGTTATCCATAAAGTACAAAAGTATGCCTTAACTCA
TTTAAAGTCATGATTTAAAGAATTTCTATTTACAATACTATCTGTATAAA
TAATTtgttctattttgaaaatatttgttttaacGCACATTTCAATGTCT
AAAAGTGTTAAAAACCAGACTCCAAGTGATTTATGCTAATAttgttataa
aaatataaataataagATTTATGCATCCATTACAATTTCCAATTTCAATT
TCtatatccaattttttttcttttcagatatGAAGAAAGGCGGCTCAAAT
AAAACTACCATGGCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGT
TTATCATAATATTCGTTTACCCAAATACATTAGACCCATTCATTATGTAG
TGGGTAAGTTTTTTCATTAAAGTGTCAAAATGTGCTCCAATGAAAAATTT
GCTGGAATACTCTCTTTACAGATTCTGTTATTAGtttaagaatttaaaat
ttcaagctTCTTGCCATCAATTACATTCATACATTAGGACTTTTCCGTAA
CTTACTTTTAATTCTCTCTCAGCTTTGGAAATTGATATGCAGCTAGAGTT
TGTAGATGGTACAACAAACATCAAGACCGAAGTCTCAAAACGCTCAAAAT
ATATCATGGTGCACGCTATGAAATTTAATAATGTTAAAGTCgttgtaaaa
aaatttgatactcAAGAAAAATACCCCCTTGAGAAAGAGCATGGTGATAA
CGGCGGCTTTTTATAcaaacaaaatctttattttgttattgaaGCTCATG
ATTATTTTGAAGTTGGAAATTATTCTTTGGAATTCAAATTCGATTATAAA
TTGCGAAAAGATTTGGCTGGATTTTATTTGTCTACTTACAATAATACAAA
GGGTCAAATTGTGTAAgaaatcattttatttgaaaatgttgttataaaaa
agaaTCTTATTTCCAATCAAGCTATTATTATAATAACAATTAcaacttaa
aataattttcagataAGATTGATAGAGAGTAAGGCACTATAAAAGGTAGC
TAAAGTAATTTACCAGGAAATTTTTGTTCACCTTGACCAATTAAGTATGG
CACTCCGCAACCTCAAATTTTTGCTCCTACTGGTGGTACAGGACTGAAAA
AAATTCAGCAATTTCATATGATACCAGTGGGACTTTATGAAAACTTCTCT
GTGAAAACTATAAGTTGAAGGTTAAGTGTTGCTACGATAGTGCTCTTACC
AACAAAAGAAGtatgataaaatttcaaaagaaaaacacatAATTTGCTAT
ACacaaggattttttaagcacttTGTGCTGGAGCCGTTTTTGTAAACTTA
GATTGAATTTCTAATATGCCTGAAAGAGAATTTCCTCAGCAAAACTGTAC
ATTTAGGAAGCTGGGGAACTTGTGGGTGTTCAGAGGGCAAAGCTCCCAAA
AATTCTTGAATATATAGATAATAATTAGTTATTGTTGCTCATAAACAACT
CACTgaggaatttctttttttttcacaggAAAGTCGCCGCTACGCAATTT
GAGCCTGTGGATGCCCGTTCAgcattcccatgttttgacgaACCAGCTAT
GAAAGCGACTTTTGATATCTCAATGAAACGAGATAAAAGTTATCTTGCAT
TGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGATGAAGTGACC
AATTATTTCCAAACAACTCCCATTGTATCCACTTACTTGATCGTCTTTGT
GATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATACTAAGGTTCCTA
CTAAcgtaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060403-exon-scaffold_341-1491911889:479595..479756 | TCONS_00060403-exon-scaffold_341-1491911889:479595..479756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1510915933:479595..479756 | TCONS_00060403-exon-scaffold_341-1510915933:479595..479756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1575043694:479595..479756 | TCONS_00060403-exon-scaffold_341-1575043694:479595..479756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1491911889:491122..491247 | TCONS_00060403-exon-scaffold_341-1491911889:491122..491247 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1510915933:491122..491247 | TCONS_00060403-exon-scaffold_341-1510915933:491122..491247 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1575043694:491122..491247 | TCONS_00060403-exon-scaffold_341-1575043694:491122..491247 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1491911889:491417..491756 | TCONS_00060403-exon-scaffold_341-1491911889:491417..491756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1510915933:491417..491756 | TCONS_00060403-exon-scaffold_341-1510915933:491417..491756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1575043694:491417..491756 | TCONS_00060403-exon-scaffold_341-1575043694:491417..491756 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1491911889:492373..492654 | TCONS_00060403-exon-scaffold_341-1491911889:492373..492654 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1510915933:492373..492654 | TCONS_00060403-exon-scaffold_341-1510915933:492373..492654 | Clytia hemisphaerica | exon |
| TCONS_00060403-exon-scaffold_341-1575043694:492373..492654 | TCONS_00060403-exon-scaffold_341-1575043694:492373..492654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_341 | supercontig | scaffold_341:479595..492654 + |
Blast
BLAST of TCONS_00060403 vs. Swiss-Prot (Human)
Match: ERAP1 (Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.480e-30 Identity = 74/230 (32.17%), Postives = 128/230 (55.65%), Query Frame = 3
Query: 237 YHNIRLPKYIRPIHYVVALEIDMQLEFVDGTTNIKTEVSKRSKYIMVHA--MXXXXXXXXXXXXDTQEKYPLE-KEHGDNGGFLYKQNLYFVIEAHDYFEVG-NYSLEFKFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAMKATFDISMKRDKSYLALSNMPVIR--TEADGDEVTNYFQTTPIVSTYLIVFVICDFEKRMVVANTKVPTNV 908
++ IRLP+Y+ P+HY + + ++ GTT ++ S+ + I++H+ ++ + + + + PL+ EH + + A + VG Y++ + L + GFY STY +G++ +A+TQFEP AR AFPCFDEPA KA+F I ++R+ +LA+SNMP+++ T A+G + ++F T +STYL+ F+I DFE + + V +V
Sbjct: 49 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQVLEH--------PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEG-LIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSV 269
The following BLAST results are available for this feature:
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