TCONS_00060402 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060402
Unique NameTCONS_00060402
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1214

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060402 ID=TCONS_00060402|Name=TCONS_00060402|organism=Clytia hemisphaerica|type=transcript|length=1214bp
CTTCGTCTAAAACAAACAATGTAATtagatacaaaataaaaacaaaagga
aaaagaCGACACTGAACGTTAGAACAACATCCATTGGACGTACAGAACAT
CCAtagaacgttgaaacaacgttgcgtaCCTGCTGACAATTTGTCTCGAT
TCCATCCGTGTGTCAATTCAAAGATCAGTTGTGTAAATAAAAAGTCTCAT
TCAGGAAAAGGCTCTGGCATTCTCAGCGtgaaagaaaaaataacattCGA
CCAAGATGTCGAAAGCAATGGTCAACATGTCAACGGAGCAGTTGACAGTC
GACAGCTCCGGTAAATCAGGAAGTGGTAGAAAGAATATGATTCTTATGAT
TGTCCTAGTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGGCATTGTATG
CAAGCAGTAACAAGAAAAATGGTAACCTCAAAgtggaaattggaaaattg
aatAATGAACTAAAAGatatGAAGAAAGGCGGCTCAAATAAAACTACCAT
GGCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATA
TTCGTTTACCCAAATACATTAGACCCATTCATTATGTAGTGGCTTTGGAA
ATTGATATGCAGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACCGA
AGTCTCAAAACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAATA
ATGTTAAAGTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCCTT
GAGAAAGAGCATGGTGATAACGGCGGCTTTTTATAcaaacaaaatcttta
ttttgttattgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTTGG
AATTCAAATTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATTTG
TCTACTTACAATAATACAAAGGGTCAAATTGTgAAAGTCGCCGCTACGCA
ATTTGAGCCTGTGGATGCCCGTTCAgcattcccatgttttgacgaACCAG
CTATGAAAGCGACTTTTGATATCTCAATGAAACGAGATAAAAGTTATCTT
GCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGATGAAGT
GACCAATTATTTCCAAACAACTCCCATTGTATCCACTTACTTGATCGTCT
TTGTGATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATACTAAGGTT
CCTACTAAcgtaag
Run BLAST on NCBI

protein sequence of TCONS_00060402-protein

>TCONS_00060402-protein ID=TCONS_00060402-protein|Name=TCONS_00060402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MSKAMVNMSTEQLTVDSSGKSGSGRKNMILMIVLVLVVVLAIIFVALYAS
SNKKNGNLKVEIGKLNNELKDMKKGGSNKTTMAPTTVPTTPGTEVYHNIR
LPKYIRPIHYVVALEIDMQLEFVDGTTNIKTEVSKRSKYIMVHAMKFNNV
KVVVKKFDTQEKYPLEKEHGDNGGFLYKQNLYFVIEAHDYFEVGNYSLEF
KFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAM
KATFDISMKRDKSYLALSNMPVIRTEADGDEVTNYFQTTPIVSTYLIVFV
ICDFEKRMVVANTKVPTNV
Run BLAST on NCBI

transcript from alignment at scaffold_341:473683..492654+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060402 ID=TCONS_00060402|Name=TCONS_00060402|organism=Clytia hemisphaerica|type=transcript|length=18972bp|location=Sequence derived from alignment at scaffold_341:473683..492654+ (Clytia hemisphaerica)
CTTCGTCTAAAACAAACAATGTAATtagatacaaaataaaaacaaaagga
aaaagaCGACACTGAACGTTAGAACAACATCCATTGGACGTACAGAACAT
CCAtagaacgttgaaacaacgttgcgtaCCTGCTGACAATTTGTCTCGAT
TCCATCCGTGTGTCAATTCAAAGATCAGTTGTGTAAATAAAAAGTCTCAT
TCAGGAAAAGGCTCTGGCATTCTCAGCGGTAGGgattaaaagaattttta
cGGTCACATTTTAATCTTTAATCAAACAAGACTTAATTgttacttttcaa
atttcatttttaattaattgtaTGTTGGTATTCTACTTAGTTTTAAAGAT
TTAGGCAAAGGTTGAAGTCTATATCTTGTTTATATAGTGTTTTTATGAAA
TGGATGGATTGGTAGTGAAATATTGCTATTAAAGTCTATTTGCTGAAACT
TCCTTCAATACCGTTGGGCCAAACTAAAATTTAAAGATTCTCATGGTAAG
TCATGGTAAGCGAACTtgcaatacacgggttgcaaaattatatcaatgca
tcagtcaaaacatgtgattactcgaaaaagttcacgtgattcttttccca
tgttacttgctttacaacttacagctgatactTTTATTAGTTTCAATAAA
TTCGAActaatcagaaataaatgtcatgtgaCAAGCATATAAAGATAAca
agtaaaagcgtgatttgtcttcagactttaattttgcaacctgtgtattt
tCTCGGTTTTAGCTAAAAGCAAAATGGGTCACGTTTGAGTGCGTTGGAAG
ACTGGGTTTCTAACCCCTTTAAAGCTCTTTTCAAGATCTATATTTTTAGC
Gtgctactttttgaaaatatagcgcacacttaaagcgaattgaacacctc
tgtctcacagcTCCGGTAAAACATTTTGCTACAGTGGCGGTGAAAATTTC
GATTGAattctcaatggggataaaaatcatattgttccaaggttaacaAT
TCCACTTGGGATGgctttggagtgcaatttctaaacaatgaatttcgaaC
GGGGATGAgaccaaagtcaatttctcagtggggctgaaattctaaggtat
tttttccaccgggggcgAAATTATTGCCAAATTTTCGAGTGGGGCCGTAG
AACTACGAAGCAATAGACGTGAGAtgcactctggtacagagtactcCACC
CCAGGCTAACCTCCGTTTCGAATTTATCCCTCCTAGattattcccttttt
agtgacCTCGTGTAGACGATATAGGATCGTCTGTCACATGATTTGAAATG
TAAGCATATTTGAAATAGCACTTTACTTTATCAATTTAACACTTGTAAAT
TGACGTTTTCAAGTGGTGGGGCGGTTTAATATTGTCAACTgggtcaaaaa
cattcaataaaCATTCAGTCATATAGCATAGTAGAGTCTtcgaaatgaat
ttaaattggtGAATTTTATGAAAGAATTAATATTTTGTGGTTTCATAGGA
TAATAAATTCTTGATATTCTTGCACCCCCAAAAACACTGGGCGTTTTCAA
ccagttttgattttaaacaaTGAAACTTGTGGCAAACGCCCGGGCGTTCt
acgggtgcttccgtataaaagattacgtcaagAATACCAAGAACTGTACC
AGTAATTGTTaacaatttaaatttggcgggatgTTAGCGAGAGCTTCcaa
tgtttttgaaatattttcaatgtgTACGATTTTATGATAATCTGTTTCTT
GACCTTTttaaaattcgtttttttactCTATTTCACATTATAGCAACCCA
GTGATTGAGTGATAATGTTTGAGCCATGAAGATTGAATAACCCGAAGGAG
CTAAATGGGCCCCCATAGTGGTTTGCGTAAAGCGTGAATGGgttttttca
cttgcgtgaatacgtgaatttgggaaaaaacttgcgtgattgcgtgaatt
gaaggtccactGGGGGGCCTCctaaatgccaatggggatagcaAATATTC
GGATATACTAATAGTATTAGTCCATTCAGGATAACAACATTATTTTTAAC
AGATCAGAATGAGATGAAAAGGTATTTTCACAACGGGGACGAAGTTTAAG
GGCCCGGATGGTTTTTACCAATTTTTAACAGGGTGTCTTCTCCCCTGGTC
TGTGAGATGAAAAATGCACCAGTTCGCTTTTGACTGGGGTTACTGAGACA
TGATGTGATACGTTTTTAAAACAATTCTTAGAATTTAGGAGAAAACCAGA
CTGtgaaaaagttcttgaaaaaaaactCCTACCTTTTATAATTCAAAACA
ACTAAGAAAGGATacacatttttcataagaacaaactatatgagaacata
cAATTCTTCGATGACCAAAGTCAAAGCTAAAGGCTAAGAACAAAAACATG
GCGAGACAAAAACACATTGAGAACATTCTTAGGCCTAAAAActtaaaaag
ctaagaacatctgaaaacttaataatttttggatgttcttacaaaaaacg
tgtagtagagCTCTTATAATATCGCAAGTGTTGAAATGTTTATGGACTTA
GATATTGACAGAGAAGATTAAAATTAGACTTAACAAACAAACGATAAAGG
TTAAGCTTTTCTCAACAGCGCGTGGGTAGTATTTCGATCAATCTAGTACC
GTACCCATGGGGGGTtatacttttacggtgtgatgGAATAAGCCcttttt
ttagtacggtattacgggatttgacgaaaaaagagacgggaaaatgGTAT
TCTAAAGTTAAACAGTGACGGTGATTAGTTTTTTATGCCTGTATTCCGGT
ATTTTAGTCTTTAAAACCCGGTGCGGTGACGCTGATATTTGCAAGGTATG
GACGGAATTTTTACGGGAAAGCGGTGTGATGTCTTATTATTTCCAAAGTA
TTTTAAGAGTATTTTcgtccatttttttcaaaaatcggttttttttttat
ttcgcaAAACTCGTTCTTAATATGTTGGCAATCGCATGTAACCGCTTTCG
AATCTACACGTTAAAAAATCGTAAAATTTCCTTTTCAAAGAGATTATTTT
TCTAGTACCAGGAAGTTTTTTGTGTTCAATTTtgaacaatagacgatatc
ggctttccgaattctccccgaatgattacccatgatgcattgcgcaaaat
aattcacggacgatattgactttcaATGCAATGCANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcgtcggcgcaaaccatggttgtgcctccttagtcactatatttt
ggttggccccctcactttcaaaatcgtggcgcgggccctgagggggggtt
tcaggggtcttaaataccgtcgtaccgtaaaagtgaaaccaCCCCCCCCC
ACCCAGAGAAATGTAATTACATTCCTCTGCCCCACCGTAGTTTATGATAG
TTTCTTGTTGTGACTTCTTTCAATGTGTTATCGAATAATATATATATAGG
CGGTAAGCATGCATTATTATTGGAGCTTGGAGTGTATCAAAAAGAGTAGA
ACGTCAAATAAGAGAGCGTCAGCTATAGACTCAAGATATGTAGCCTAACC
AGCTGGCGCACAACGTCAATTTAATGTTCACAagcgtccatttaacgtta
gatgaacgttgaaacaacgttgtgtggcaGCTCAGTGTATCATCTTCAAT
CTTCTTGATTttagtgaaagaaaaaataacattCGACCAAGATGTCGAAA
GCAATGGTCAACATGTCAACGGAGCAGTTGACAGTCGACAGCTCCGGTAA
ATCAGGAAGTGGTAGAAAGAATATGATTCTTATGATTGTCCTAGTCCTCG
TTGTTGTCTTGGCAATAATCTTTGTGGCATTGTATGCAAGCAGTAACAAG
AAAAATGGTAACCTCAAAgtggaaattggaaaattgaatAATGAACTAAA
AGGTAAGTGTGCCCAGTTGTTTATGTCATGGCCCGGTGGGGTACGAGGTT
TGCAGAGTGGGGTATGTTCAAgctgaatttcgaaaatggACACTGTGAGA
GACTAAACTTCGAAAAATTTTTACCCCTTTTTAATGATGTTTCCCAATCC
TGTGAGAGTATTTGTTTATTTCGATGGTATCTGGGGAAATGAAGAGTACG
GGTGTTTTTTATTTATGTATATTTAGAAAATCGCACACAAAACCTAGTTA
AAAGGAACTAGAAAATCCTATTGATTCGGTTTCACCAAACGACTGTGCCA
TAAACATAAAAACTATCCTCTCGTAAACTTAGCACCTTGGGCTACCTTAT
CGGTCGGTAGAAAATTCGTCGTCAAAAACTTCGTTAAAAATTTCGCCGGT
CAAAAATATTCGTCggtaaaaaatttcgtcaccaagtgattttttcgtca
ctttttgccgacgaattttctaccgataaggtGCAATATTTTCTGGAGTT
ATGTTTCTGTTTTTCAAATGATTCCAATTTGAAAGAACAGTTGCTTCACA
CAAGAATTTTGTCCACCAGTATTGTTGGTTAGCAATCATGAcctgaaaat
atcaaattcaaaactAAACCTTTGGGGTCACCTAATCATTGTCAACTCAA
TGTTTAAAAAGCAAGCATAATCGCTGTAAACTATAGATAAACTaacaaaa
ttgaataaaatagcAAAATGAATGAAATAGCTCGCCGAAATTTGCTAAAA
AGAGCTTTTAGCTATGGTTATTCTTACTGAATTAAAAGGACACAGGCTTT
CcagaaaaagtctaaaaatgtgACGTTGGAGAGACTTGATATGTAAAATG
TCacgattttacaaattattgtttttggtaattttgatgTTTCCGTTATC
ATGCAGCAGTGATGATGATCGCAGAAAACTCGACCAGTTTTGCATGACAT
GGTGTTCTTGTAGACCTCATACAGGTAAAAATGATGAGAATTCAATAGAT
AGAGTTCCTATCAAGGCAATCTggtacaccccttctcacagaccagaTAG
GTTTTTTAGCcaatgggggtaaaaataaggGAGCAAAACTCGATGGACAT
TGATATTCCCGTGTTTTTTATGGCTCGGgatataaatttcatttttttca
agttagaaaattcagtggggatggaaaaaacagcacaatattttgcagtt
aggatttgcttatctgattttTCAGCGTAGACAAAAactagagtataatt
ttccactaaGGACAacatttggccaatttttcctgTGGGAAGTGgtccta
gtgggtctgtgagaagagcaACTCGATCCGCTTTTTTATCTTACTGATGA
ACGTGAAACAATCCTTTTCGCAAAATGAACGCTTAATCATAATCATAAAA
AAAGCGACGTTAGGGTTTGGGTTTGAGTTTGGTTTAACATCCCTTTTTTA
AGAGTCTTATAATAAGTTATTAGCCAGAAAGCATGAAGAAATTCTCCTCA
TTTCATCCATCCCTAACAATTCTTAGTCTCTGGATACGTTTTAAAGTTTG
GCGTTAACGAGATGGTTTATCGTGGCGCGATGGTGCGAATTTTCAAAGAA
TAATTGATTCTTCGTTCGAGCCCAGAGGGTCTCGTTAGTTTTACGCCTCA
ACCCTTCAAACCCGAGTGACGTGTATACACGTTCTAAATTAGCCAATATA
CCGAGTCCCACACTTAAGGCTATAACTCCTGATCACTCGATTTAAATGGG
cataaaccaattttttttataaagatataaaaatgcCTTTTCAATGGTGC
CAAAATCATTGTTTAACTCTCaagttacaagcttttatgtaaagttgaaa
tttggaattaaaaaaaaaagttaagaaatttcaaatttttcaaaaaattt
gctgGAACTAAGTTAAgttttaaacatgtttttttgaCGACTAAACCGCA
GGTGgatttcgcaaaaaaaaaaaattagccgATTTGGATGTTTTGAAATG
CGTcgcaaaaacacgtcaaaagGTTTtaattcaaatgacgtcatcactga
aaaaattaatttctattAATCAATAAAAATGCAATcaataccaaattttg
actggataTGAATTTTTCGACATTTTAATATTAGCtgaatttaaactttt
caaaatctttgtgtTGATATGCTTCTTTTGCTGACCCTTTATACGAAGGT
TAAGGAACAAAGGAAAGTGGTCGTGCACGTCACGCAAAAAGATGTTTAAG
ACCAtcttcagacgttacggttctaTATTGTTCCGAAACAAAACGTTTCC
GAAATAAGCGTGAACGTCCAAAATTCGACACGTCAAAGAAAaaagatcga
aacggtttcgctctcCACTATTTTTATTGGAACGGAACTGtctgttttct
tgctccgaaacgttccgaaaccaatatgaacactctcgatccgtaacgga
AATCATACCGGACCGATacgaaccgtaacgtctgaacatggtttATTTAA
GTCTTGACCGAACTCACCTGTGATTGATTTTGATCAAATCTATAAGGTAA
TAACAATTTGACACACTGTTAAACAACGGTTTAAAGCAAAACCATACATA
AGCTTAATGGTCCGGCTAGACTTTTTTTCATAAACTTATAAACAAGACGA
AAGGAAGCTTCTATACGTCTTTTAACAAACCGATtattttggatgaaatt
tctATGGTCTAGTGTTAAACCGAAAACTAAGGAACTTGAttgcaaaaatt
taaaatgaatgAAACTTGTGGTATAAGATTTTTGTTTTTCGTACTTATCA
TAAACGGTACCATTTGCAACGTTGCCAACATTGATAATGTTGTTGATAAA
AAATGCAAATCGAACGAGTTCAGATGTCGTTTGTGTGAATTATTGTACCA
AAGAATTTGTCAATTATCTTCAGGTATAGATTTTACTGCTTTTTAAAATC
GGTCAATACTTTGGGATATGTTAATGAATGGGTCTCTCTCAACAACACGG
CCGGTGTTAACAGAAGAAGGATATTCTCTATATCTATATCTATAGTGTAG
GTATAAGCCCCAACAAAATACAAATGGTGTACATCACTAATCCTAACTAA
CCTCCCACAAAAGGACCACCAACACCAtatcataccgccaggaggaagga
accccAAATAAGATAACAAAATGAGAATAATGAGTCAACTGATGCCTGCT
GAACTTATGCTCACGAAGATGACTGAAGTGAAACCAACCCTTTATCGTAT
TCTTAGCATCATAGTTCAATTTAGCGGCGTTTAAAAAggcgttgtggtat
agtggacatcaaccttgattcctgtacagaCGACCAAGGtccgattccca
ctcacaacggttcacttggcaagtgagcAAACCTTCGctcgggtcaaccc
atgccatgtgaggggagttgggtagtcagttcaaggtgctgacgggatgc
ttactcaaagcatctatagttgcaaGAATGGActcccagagcctcctgta
actcaaactcaaccataatagataGAATAGCCAATAGCGGCGTCCAATAC
ATCGAGTTTCAACGGGCTCTACAGTCTACACACGGAGATACGGTCGCTTA
TGGGCGGAGGCGGTTAGAAAAAGGGTGGAGTAGTTTTGGCTCCGCCCGAA
TTCAAAGAATTCTCAGGTGTTTATCACTGGCCGTATTTACCCTGGATCCA
ATACTATTAAAAATTCATAGGAACGTGTGAGCAAtgctaaattttttgtt
ttgaaagtcgcgcactttcgtttttgttcattcacttttttgattttttt
tgctgtagACGCAGAGGGGTACAGCGACAGAACTTGGTTGGTTTGGACCT
TATAAAAACTTCTATACTCAGACAGATGCCTGCTTCGTATCTTGTGTTCG
TTGTAGACTTCTTCCATTGGATTATCACATAATACATTAgtacattttta
tgacactgGCAATATTCACAGTTTAGTCTTGAGGgctgatgttttttata
aaaaatgtacagAAGCTTCTTGTCAACTGCTCTTGTTAGGATGATTGATC
GCGTTAAAtttctttgacaacaaatttgattcgataactccaccaagttt
atcaatcatactttctgtcgtaacaactttcactgatagcgggcgcggcg
ccctttttaacttttttgttttcattcaaaatgaaaaatgaccgGACTCC
GATTGGAGGTTCACAgaagtagtagtagtagtagtagtagtattttattt
ttcatgattgtaGTAGTAAATATGATACAAGGTTTTATGTTAAATTATAT
AATAAAACTAAACAATGCTAGAATGGAGACTTCATATTAGCAAGCTATTC
GAGAATGGGCCACCTTTTTGTAATTCCAAGGAATACTAGTATAATTAGGA
AGAATTTCTTAAACTACTGAACACGTAAAAGTCTTAAAACagacaaataa
aaatgaaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
CTGAAAGAGGGCCTGAAAAGAAGACGCACTGATTTCCCTCTGgttctttg
tttatgttgatAAAAGTTTAGAGAGAAGAGATTCTTGAGTCTAATTGGAG
AAAAACCACATAAGATCCTGTGAGCAAGAGTTATATTTAGTAGATTTATG
TGATcagaaattttaagaagattaaGTTCATAAAAGATTTTACTAGAGTG
AGCattgaaatcagaaaaagtCATGATTCGTTTGCATCGTTTTTGAAGTT
TAAAGACTCTTTCCACATTATAGTTATGTTTTTGACCCCAGATTTGGCAA
GCATAATTAAGATGCGAAAAAAATAGAGCATAATAAATCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAACTGGGATTACTTTA
ATAGTTTTAAGGGAGTTTGGAAAAATTCCAGTTTGAAAAGTGAGATTTag
gattttttctaaaatagttGCAAGGGAGTCTGGAACTATGTCAAAAATTT
TACCAGGAATACTAAAATCACCTGAGCTTTTACTGTGATTTAgggatttg
aaaatgtttacctTGTTAACTAGGGTAAAGAAAAATGAGTTGCCTGATGT
TGGTCTTTTTATGTATTCTTTAAAATCTCCAATGTTTGGTATCTCAGCTT
GAATTTTAGTTGCTATGGTAGTGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGATTGAGTTTCtataaaatttgtatttt
tgacgTAGGTTAGCTTCATTGATTGGATCTTTAGCATTGatggatttttt
taaaagtttatctCTGACTGACAGAATGCCCAGAACGCCCGCTGCCTAAC
TGCCTATcccccgatgggattaacaaataccgtgaagtcgggtaacttgc
atcagtggaggctaacatagccctcaaatgaatgacctggctagtcatgc
attaaaataaaattaatcaataacaaaaatggtagagtagagctgcgagc
ggagctgcatagttcatttgttttgaaattttgctgctttgattggtcag
tcatttgatggcgatgcatgttagcctccactgatgcaagttacccgact
tcatggTAACAAGTGTGTAACTTACCGAGctcaagtgacgtcaaacgctc
catcgttttgccacttatttggtcttcttcgttccagacattcgcgtgtg
ttccactacggattttttcatttttcgatttAAAACCCTACTGTAAgtaa
agaaattaaaaagacaacttatgtgagaatgttgagttttgtttatatgg
cagtTTGTGATGGACTGATCagtgatagaccttttttcaaagaggccatc
ctgttgaataattatgtactccagcagaaaaacaatgatacaaccATGCA
TTAATtattaaaatatgcatgatacagtaattatgcatggctgtatcatt
gtttttctgctggagtacataattattcaacagggtggcctctttgaaaa
aaggtctatcactGATCAGTCCATCACAAactgccatataaacaaaactc
aacattctcacataAGTTGTCTTTTTAATTTCCCAAATTTCGTCgtaagc
gttcacttccacaataatttatgtaattgcaatttcgaTCAGTCCACAGT
CAGGTTCAACATATACGCGTGTTTTTATTCATGTGACCGAAGTGAAAGCA
ATCCGGGGGTgagtggcgaagcaacacagcagattaatcataaagtaaag
aaatatcttttggcattgacaataaAGTATAATATATTACAGCTTACATT
ATAtctccttaattcaaaaatcaaaaattcatttcgcATTcgctaaaaaa
gaaaataataataatgaattGATATTATATACTAAGACGCCCCTGTCTTT
TACTCTCGTCTAATTTCCCATCTTGGAACGTgaaaaacgcccgtccgccc
aatatccacctaATCACCTTGAATttactttaattgtcctttgacttcca
aaaaatagtatttaaaaactatgaatttataataattacaaaaaacaaaa
agtttgatacttcattagtgaaaaatacaataaattcctagtttcaattc
tcaatgggcgtttttctagcgcttcgtttatcgcgcaatttttgcgtcac
acaaactttctcgaccgctcgtaataattctccattgtcaagtcaggatc
gatggtgacgtcacctaagcataaaaaagaaagaatttcgtcagttttat
gcatatattaatttgcgagatattctattcgccgtgCGAttgcacttttc
gtagactagtcggaatacctTCTTTTACttgcgggattgatggtaacttt
tcatcttcgttattttttaaatgaagcacaaccgaaaaaaagcaaaactt
cAGAAAGCTGcatatttccagtgagtaaaagattctgacaattaacataa
ttgatgatgatgatttttttcggtcaggcaaatgtctcgtattgggggtt
ctagtcttgacccctaagcctacgcaagattgaagcgtttgggtaaacga
gacaaaactccaaaaaagctggtgttttgaagcgcttctgTGCGATCGAA
ATATTGCTCTTTGTGACGCACTGCTGATAtatagagaaaatttttttcct
ctctgaagctaagaaaagaaaattagtttcaatcagagattctgaccttc
ctatattattcctatctgcaaagaagggtgtcgaaattagaagagggatg
tcgttgaccaacttacggtactcggtgcgaaagagaaattgtgtaccatt
cattaactcaaatcgaatgactttggaggtttgttgaaatggtggccaaa
ttgccgtcccatgttttatcaaattgtcccaagttagagcagttgactgT
AGCTATACATTGGGCTaatccatttttaaaccatacatgGGTATTATTGA
CGATTTGTTCCAGGGGGggtctgagccttgattttccaaggggtttttgc
tcatttttcagattttccaaggggctTATTAAAGGTTTCCACGGGGTTCT
CTCCTCATAAACTGATATCAATAGTCATTTTCcaggccctttttcacaaa
atttcactttccagggACATGTCAGCTCCTAATTTCCAAGGGATTagttt
gttatccaaaatttccagggagggggtagtgaaaaaagttcgtcaatacc
cctgtacaatttttttttggaatactGTAGCccaatttttttacattttt
atcatcatcaagGGGTTCAAGATTGCCACATTTTACACAGCCTTTCTTTT
ATGGCGATTGAGGCCTTTCAGTGTCTTGCCTGaagggcggctgtaaaatc
tcaCCCTTCATAAAACACCTCTTTTACATTAATTTGGTCtgatgtcgaca
tccctcttctaatttcgacatccttcttccGTCACCTAATGCAATGTAAA
AATTATGgtagttttcagtttttgagacatgccatttAACCTCCCCGAGA
AGGGAACTAGACCtcacgagttaggctaactgttatgatcACAAATCCTC
AAAAGGAGCCCCATCCATGAATAAATCCTGGGATGGTGCACCAACGACTG
GGTGTATAGGGGTCACTCTCCTTTGTTCCAGGAACAAGCTCACTAATTCT
TAGGGGTGTGTCTACTATAGGCTCTGCCTCCCCTGCTGCATGAAATTTGC
ATCTTCTTTATTAAAGAATTTACCTGCTTCTAGATTGATATTGACACCTG
CCCTTATGCctaaaattgttgtttttggCAATCTTTTTCTGTTTATTGCA
AGGTAGGAAAAGCCAAATGTATTCTTTAACTTGCCAGATGGCATTTGTTg
atgactttaaaatttggtcaattgCCTATAAAGGTCTATGGTTAGCTATC
GAAAAATAATTCTAACATTTTTCTGAATGAGCCGACTCTGGATTTTTGAC
CTGGAggtaaaaaaagttagaaagtctctgtaagggtcaacaggtttttt
tccttttttggttctctttcagaaaaaccaaatcCAATTAAATCATTCTT
GAGATTGTTGTTGAGGCACTAGATATTGGAGACTTTTTATAGCATTATTT
AGCTGTTCACCTGATTTTTTGTGTTCAACAAATTTGTTAACATAAATCTA
AAGTATAATGAGATTCCAGACAAAATTCAATCTGTCTGTAACTTAGGCTA
GACTTTCCTATCCTAGCTTGCTAAATTTTATCATatgcaatgaaaaatgc
aaAGACTTAATTATCACAACAAACTTTTACCTCTACAACAATGATCAAAT
CATTTAAAATGTCTAAACATATTATCAGTTGCTTATCGTTTATTGAATAA
ACATCAAATCTCAAATGATATCCCTCTTTCAGATAatcatatatttttaa
aaaggaaatcATCTATGTTGATCCAAATCTGAAATACAAACAAGATTTTG
TAAAATCATGGGAAATCCATCAATTAAGACACAAATCTATACATTTATGA
GCTGACATTGTTGCAAAGTGTGTTTTCATTATGgcagaaaaatatgaaat
tgaagagaattcttcatTGACATTTCAAGACTCTCCACGTCACAAGAAAG
GATTTTTTATTAGCAAAGGCCAACTTATAGTCTGCCTTTTAGCTGTGATA
TGCTTGATAATAATTATAGCTGTACTGTCTGCTACATTCAGTTGGTATGC
AGCCAAGAATGATAATACTAATGGGAAGTCAGGTACTGTATAACTAGTTT
CATAAGACctgtattttttttatttttttggtctATGAACATTTGCAGAT
GatctttcatttcaaatttaatcATCATTTGCTTATaatgattaaatttt
taaaacaattgcgtgattgtgtgaatgggaaagctttgcgtgaacaaaaa
tttcgtaaattgtgaaaaaacattgtgtgaatgtgtgaatttgggaaaaa
aatttgcttgattgcatgaattgaaggtccgctaggggggggggctcata
aAGGAAGCATGTTAGATAGAATTATGGTCATACCGTAAAATCGATAATCA
ATTAAATAGTTTCTGTTGGGTAATGTGTCAAAGTTACGGTGAAAggaatt
aaattaaagagaaaatgtttttagctATAATAACTATTTTCCTTCCTtaa
taaaataaagttttgtgAAACAATTTCTCATTCATTGAAAATCAGACAGG
GTCTTTGCAAATAacaattttatctcatttttgcAAATAACAATTTAATc
tcatttttgcaaaaaacaatGTTTTCTGTTATCCATAAAGTACAAAAGTA
TGCCTTAACTCATTTAAAGTCATGATTTAAAGAATTTCTATTTACAATAC
TATCTGTATAAATAATTtgttctattttgaaaatatttgttttaacGCAC
ATTTCAATGTCTAAAAGTGTTAAAAACCAGACTCCAAGTGATTTATGCTA
ATAttgttataaaaatataaataataagATTTATGCATCCATTACAATTT
CCAATTTCAATTTCtatatccaattttttttcttttcagatatGAAGAAA
GGCGGCTCAAATAAAACTACCATGGCTCCAACGACTGTCCCAACAACACC
AGGAACAGAAGTTTATCATAATATTCGTTTACCCAAATACATTAGACCCA
TTCATTATGTAGTGGGTAAGTTTTTTCATTAAAGTGTCAAAATGTGCTCC
AATGAAAAATTTGCTGGAATACTCTCTTTACAGATTCTGTTATTAGttta
agaatttaaaatttcaagctTCTTGCCATCAATTACATTCATACATTAGG
ACTTTTCCGTAACTTACTTTTAATTCTCTCTCAGCTTTGGAAATTGATAT
GCAGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACCGAAGTCTCAA
AACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAATAATGTTAAA
GTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCCTTGAGAAAGA
GCATGGTGATAACGGCGGCTTTTTATAcaaacaaaatctttattttgtta
ttgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTTGGAATTCAAA
TTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATTTGTCTACTTA
CAATAATACAAAGGGTCAAATTGTGTAAgaaatcattttatttgaaaatg
ttgttataaaaaagaaTCTTATTTCCAATCAAGCTATTATTATAATAACA
ATTAcaacttaaaataattttcagataAGATTGATAGAGAGTAAGGCACT
ATAAAAGGTAGCTAAAGTAATTTACCAGGAAATTTTTGTTCACCTTGACC
AATTAAGTATGGCACTCCGCAACCTCAAATTTTTGCTCCTACTGGTGGTA
CAGGACTGAAAAAAATTCAGCAATTTCATATGATACCAGTGGGACTTTAT
GAAAACTTCTCTGTGAAAACTATAAGTTGAAGGTTAAGTGTTGCTACGAT
AGTGCTCTTACCAACAAAAGAAGtatgataaaatttcaaaagaaaaacac
atAATTTGCTATACacaaggattttttaagcacttTGTGCTGGAGCCGTT
TTTGTAAACTTAGATTGAATTTCTAATATGCCTGAAAGAGAATTTCCTCA
GCAAAACTGTACATTTAGGAAGCTGGGGAACTTGTGGGTGTTCAGAGGGC
AAAGCTCCCAAAAATTCTTGAATATATAGATAATAATTAGTTATTGTTGC
TCATAAACAACTCACTgaggaatttctttttttttcacaggAAAGTCGCC
GCTACGCAATTTGAGCCTGTGGATGCCCGTTCAgcattcccatgttttga
cgaACCAGCTATGAAAGCGACTTTTGATATCTCAATGAAACGAGATAAAA
GTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGA
GATGAAGTGACCAATTATTTCCAAACAACTCCCATTGTATCCACTTACTT
GATCGTCTTTGTGATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATA
CTAAGGTTCCTACTAAcgtaag

Coding sequence (CDS) from alignment at scaffold_341:473683..492654+

>TCONS_00060402 ID=TCONS_00060402|Name=TCONS_00060402|organism=Clytia hemisphaerica|type=CDS|length=3828bp|location=Sequence derived from alignment at scaffold_341:473683..492654+ (Clytia hemisphaerica)
ATGTCGAAAGCAATGGTCAACATGTCAACGGAGCAGTTGACAGTCGACAG
CTCCGGTAAATCAGGAAGTGGTAGAAAGAATATGATTCTTATGATTGTCC
TAGTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGGCATTGTATGCAAGC
AGTAACAAGAAAAATGGTAACCTCAAAgtggaaattggaaaattgaatAA
TGAACTAAAAGatatGAAGAAAGGCGGCTCAAATAAAACTACCATGGCTC
CAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGT
TTACCCAAATACATTAGACCCATTCATTATGTAGTGGCTTTGGAAATTGA
TATGCAGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACCGAAGTCT
CAAAACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAATAATGTT
AAAGTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCCTTGAGAA
AGAGCATGGTGATAACGGCGGCTTTTTATAcaaacaaaatctttattttg
ttattgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTTGGAATTC
AAATTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATTTGTCTAC
TTACAATAATACAAAGGGTCAAATTGTgAAAGTCGCCGCTACGCAATTTG
AGCCTGTGGATGCCCGTTCAgcattcccatgttttgacgaACCAGCTATG
AAAGCGACTTTTGATATCTCAATGAAACGAGATAAAAGTTATCTTGCATT
GAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGATGAAGTGACCA
ATTATTTCCAAACAACTCCCATTGTATCCACTTACTTGATCGTCTTTGTG
ATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATACTAAGGTTCCTAC
TAAcgtaATGTCGAAAGCAATGGTCAACATGTCAACGGAGCAGTTGACAG
TCGACAGCTCCGGTAAATCAGGAAGTGGTAGAAAGAATATGATTCTTATG
ATTGTCCTAGTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGGCATTGTA
TGCAAGCAGTAACAAGAAAAATGGTAACCTCAAAgtggaaattggaaaat
tgaatAATGAACTAAAAGatatGAAGAAAGGCGGCTCAAATAAAACTACC
ATGGCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAA
TATTCGTTTACCCAAATACATTAGACCCATTCATTATGTAGTGGCTTTGG
AAATTGATATGCAGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACC
GAAGTCTCAAAACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAA
TAATGTTAAAGTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCC
TTGAGAAAGAGCATGGTGATAACGGCGGCTTTTTATAcaaacaaaatctt
tattttgttattgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTT
GGAATTCAAATTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATT
TGTCTACTTACAATAATACAAAGGGTCAAATTGTgAAAGTCGCCGCTACG
CAATTTGAGCCTGTGGATGCCCGTTCAgcattcccatgttttgacgaACC
AGCTATGAAAGCGACTTTTGATATCTCAATGAAACGAGATAAAAGTTATC
TTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGGAGATGAA
GTGACCAATTATTTCCAAACAACTCCCATTGTATCCACTTACTTGATCGT
CTTTGTGATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAATACTAAGG
TTCCTACTAAcgtaATGTCGAAAGCAATGGTCAACATGTCAACGGAGCAG
TTGACAGTCGACAGCTCCGGTAAATCAGGAAGTGGTAGAAAGAATATGAT
TCTTATGATTGTCCTAGTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGG
CATTGTATGCAAGCAGTAACAAGAAAAATGGTAACCTCAAAgtggaaatt
ggaaaattgaatAATGAACTAAAAGatatGAAGAAAGGCGGCTCAAATAA
AACTACCATGGCTCCAACGACTGTCCCAACAACACCAGGAACAGAAGTTT
ATCATAATATTCGTTTACCCAAATACATTAGACCCATTCATTATGTAGTG
GCTTTGGAAATTGATATGCAGCTAGAGTTTGTAGATGGTACAACAAACAT
CAAGACCGAAGTCTCAAAACGCTCAAAATATATCATGGTGCACGCTATGA
AATTTAATAATGTTAAAGTCgttgtaaaaaaatttgatactcAAGAAAAA
TACCCCCTTGAGAAAGAGCATGGTGATAACGGCGGCTTTTTATAcaaaca
aaatctttattttgttattgaaGCTCATGATTATTTTGAAGTTGGAAATT
ATTCTTTGGAATTCAAATTCGATTATAAATTGCGAAAAGATTTGGCTGGA
TTTTATTTGTCTACTTACAATAATACAAAGGGTCAAATTGTgAAAGTCGC
CGCTACGCAATTTGAGCCTGTGGATGCCCGTTCAgcattcccatgttttg
acgaACCAGCTATGAAAGCGACTTTTGATATCTCAATGAAACGAGATAAA
AGTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAGCTGATGG
AGATGAAGTGACCAATTATTTCCAAACAACTCCCATTGTATCCACTTACT
TGATCGTCTTTGTGATTTGTGATTTCGAAAAAAGAATGGTTGTTGCAAAT
ACTAAGGTTCCTACTAAcgtaATGTCGAAAGCAATGGTCAACATGTCAAC
GGAGCAGTTGACAGTCGACAGCTCCGGTAAATCAGGAAGTGGTAGAAAGA
ATATGATTCTTATGATTGTCCTAGTCCTCGTTGTTGTCTTGGCAATAATC
TTTGTGGCATTGTATGCAAGCAGTAACAAGAAAAATGGTAACCTCAAAgt
ggaaattggaaaattgaatAATGAACTAAAAGatatGAAGAAAGGCGGCT
CAAATAAAACTACCATGGCTCCAACGACTGTCCCAACAACACCAGGAACA
GAAGTTTATCATAATATTCGTTTACCCAAATACATTAGACCCATTCATTA
TGTAGTGGCTTTGGAAATTGATATGCAGCTAGAGTTTGTAGATGGTACAA
CAAACATCAAGACCGAAGTCTCAAAACGCTCAAAATATATCATGGTGCAC
GCTATGAAATTTAATAATGTTAAAGTCgttgtaaaaaaatttgatactcA
AGAAAAATACCCCCTTGAGAAAGAGCATGGTGATAACGGCGGCTTTTTAT
AcaaacaaaatctttattttgttattgaaGCTCATGATTATTTTGAAGTT
GGAAATTATTCTTTGGAATTCAAATTCGATTATAAATTGCGAAAAGATTT
GGCTGGATTTTATTTGTCTACTTACAATAATACAAAGGGTCAAATTGTgA
AAGTCGCCGCTACGCAATTTGAGCCTGTGGATGCCCGTTCAgcattccca
tgttttgacgaACCAGCTATGAAAGCGACTTTTGATATCTCAATGAAACG
AGATAAAAGTTATCTTGCATTGAGTAACATGCCGGTCATCAGAACTGAAG
CTGATGGAGATGAAGTGACCAATTATTTCCAAACAACTCCCATTGTATCC
ACTTACTTGATCGTCTTTGTGATTTGTGATTTCGAAAAAAGAATGGTTGT
TGCAAATACTAAGGTTCCTACTAAcgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037994XLOC_037994Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060402-exon-scaffold_341-1491911889:473683..473910TCONS_00060402-exon-scaffold_341-1491911889:473683..473910Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1510915933:473683..473910TCONS_00060402-exon-scaffold_341-1510915933:473683..473910Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1575043694:473683..473910TCONS_00060402-exon-scaffold_341-1575043694:473683..473910Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1491911889:478547..478784TCONS_00060402-exon-scaffold_341-1491911889:478547..478784Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1510915933:478547..478784TCONS_00060402-exon-scaffold_341-1510915933:478547..478784Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1575043694:478547..478784TCONS_00060402-exon-scaffold_341-1575043694:478547..478784Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1491911889:491122..491247TCONS_00060402-exon-scaffold_341-1491911889:491122..491247Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1510915933:491122..491247TCONS_00060402-exon-scaffold_341-1510915933:491122..491247Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1575043694:491122..491247TCONS_00060402-exon-scaffold_341-1575043694:491122..491247Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1491911889:491417..491756TCONS_00060402-exon-scaffold_341-1491911889:491417..491756Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1510915933:491417..491756TCONS_00060402-exon-scaffold_341-1510915933:491417..491756Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1575043694:491417..491756TCONS_00060402-exon-scaffold_341-1575043694:491417..491756Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1491911889:492373..492654TCONS_00060402-exon-scaffold_341-1491911889:492373..492654Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1510915933:492373..492654TCONS_00060402-exon-scaffold_341-1510915933:492373..492654Clytia hemisphaericaexon
TCONS_00060402-exon-scaffold_341-1575043694:492373..492654TCONS_00060402-exon-scaffold_341-1575043694:492373..492654Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060402-proteinTCONS_00060402-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:473683..492654 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	2.85077	3.09025	3.17488	1.83106	4.29386	3.93247	21.6983	18.1026	23.4883	35.6856	29.9734	27.6802	18.5644	19.134	13.9226	13.3622	3.89933	8.60826	11.1082	9.42872	2.07931	1.16653	17.394	16.741
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014782Peptidase_M1_N
Vocabulary: Molecular Function
TermDefinition
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00060402 vs. Swiss-Prot (Human)
Match: ERAP1 (Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 4.151e-30
Identity = 74/230 (32.17%), Postives = 128/230 (55.65%), Query Frame = 1 
Query:  541 YHNIRLPKYIRPIHYVVALEIDMQLEFVDGTTNIKTEVSKRSKYIMVHA--MXXXXXXXXXXXXDTQEKYPLE-KEHGDNGGFLYKQNLYFVIEAHDYFEVG-NYSLEFKFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAMKATFDISMKRDKSYLALSNMPVIR--TEADGDEVTNYFQTTPIVSTYLIVFVICDFEKRMVVANTKVPTNV 1212
            ++ IRLP+Y+ P+HY + +  ++      GTT ++   S+ +  I++H+  ++ +   +     +   + PL+  EH         +     + A +   VG  Y++   +   L +   GFY STY   +G++  +A+TQFEP  AR AFPCFDEPA KA+F I ++R+  +LA+SNMP+++  T A+G  + ++F  T  +STYL+ F+I DFE    +  + V  +V
Sbjct:   49 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQVLEH--------PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEG-LIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSV 269
The following BLAST results are available for this feature:
BLAST of TCONS_00060402 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERAP14.151e-3032.17Endoplasmic reticulum aminopeptidase 1 OS=Homo sap... [more]
back to top