TCONS_00060387 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060387
Unique Name	TCONS_00060387
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3573

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:309281..325216+

transcript sequence

>TCONS_00060387 ID=TCONS_00060387|Name=TCONS_00060387|organism=Clytia hemisphaerica|type=transcript|length=3573bp
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGA
TCAGTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATAT
ACACCACGCACTGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGA
TTTTTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTG
ATCGGATTCTCACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCA
CTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATAC
TAAAAAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGA
GATCTACAAATAGagtaATCAAACTACATAGCCCGGACGGAGATTCGGAT
GAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTT
CGTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACA
TCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAAT
GGCGTTCCTGATTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGC
TTTGGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACG
CGAACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGC
TACCCAGATATCGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCC
AACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATA
atagtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgct
aaaatctcaaaaggTGATTATTATTATTGCATTATGACTTGGAGTCCTGG
GAACGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTT
GTATGAAGTACGATTCGACAAACGGACAACCAACAACTCTTCAAGAATAC
AATACACCAGGTGGATGGATAGACGATGATTACACCAAACCAAAGTTTGC
CAAAGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGAC
ATTTGGCTAAAGTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTT
TTGACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGA
TGATCAAATTTTatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTC
ATGTCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGT
GACTTGTTGAAAGACAGTGATGGCACCAAATGTACATATCACGATATTGT
CTTCAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACG
TACCCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTA
ACGTCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGAC
AGAGAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAG
AGACACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTG
AGTGTTTATGGTGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTA
CGGATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACT
TCGATGCTAGAGGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTC
TACAAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAA
GTACTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGG
GCTGGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGT
GACGTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTA
CTATGATACTGTTTACACTGAAAGATATATGGGACTGCCTACACCAGAAG
ATAATATTGCTGGGTATCAGAGTACAAGTGTCTTGAGCATGACAAAGAAC
TTCAGAGGAAAGAACTTTCTACTGATACATGGTACAGCAGATGATAACGT
CCACTTTCAAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAG
TCAAATTTCGAGGACAGTTTTACACGGACAAGAGACATTCAATACAAACG
AGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAA
TGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCA
AATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAAT
TAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTG
GACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATC
TAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCAT
ACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAAT
TAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGC
AAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAA
CGAATGTTGTTTTTCGaaggttaaattttgattttcttataaaataatgt
AATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAA
AAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTT
ATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAA
AATGTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGT
TCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACA
AGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGG
TAAATTACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACC
AAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTG
GCACGTacgtagacgatgctatcgtccgtttagagggtcagtaaacgTGA
GAAAGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcgg
tagagttttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTC
TGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCG
CTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcg
tcagCACGTACTTTGTGACATTATCTtgtataattttgattttttaattt
tgtttaataattgtttattatttactatgtgtaaaagaaaattatattGT
GTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAG
AAATTATCGTCActaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:309281..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060387 ID=TCONS_00060387|Name=TCONS_00060387|organism=Clytia hemisphaerica|type=transcript|length=15936bp|location=Sequence derived from alignment at scaffold_341:309281..325216+ (Clytia hemisphaerica)
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTT
GTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCT
CAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAG
TATTTTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTT
GTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGC
CCTCAAAAAAGACAGTAAGTATTTTCTGGATCAGTCTGGTCTGCAATTTA
TACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCG
TCCTCGTCTTCATACTAGCACTCAAAAAAGACATTAAGTATTTTACTGAC
CAGTATGGTCTGTAATTTATACTTCATGTAGTTCCCGGACCAACATAATT
GTTCTTGTCCTTTTGATCTTATTTAATCAACCTCATCCTTGTTGCTTCAA
ATTAGCTCTAAACAGaaagtaaatattttaatgagtagtctggtctgtaa
tttataGTTTATCTTATTCCAAGACCAACATCATTATTCtagtcattttt
gtttttatctcaATCACCCTCGTCCTCGTTTTAATACTAGCTCTCAAAAA
AGACAGAAAATCTTTTACGGGCCAATctgtcaaaacaaacaaaagagaTT
CCAACAAATCAACCTCGTACCCAGAGTCCATTgaaccactttttgatttt
actcatGAACGTGTTCGTTCAACTGTGAGAGCTATCATCGTAATCATAAA
GTGAACAAAGGGAATGGGTTCGAGTTTGTCTAATAAACAAAACTctaatt
ctcaaattttcagaagaattGAGTTCGGAAACGTTGATCAGTCCAAACAG
ACGATTTACATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCACTG
CAAGCATTTATTGGGTGTCAGGTAAGATAATAATCTAAGTCCTGGAAATT
CTACCTATGATAATAATTATTAGGACAATCGCTCCATGGACAATCttata
ttgtaattttttttcataagatgGAGAGGTGATAAcactaaaaagttaaa
atatttattttctctgtctttggaaatattttatgaaagGAGCTGCTTCA
GATAACAAAATTCCGGAGTAGTTTCCCGGGCGAAGACAGTCAATCGGGAT
GACGATCCTTATTATCTGGGAAAATGATTTGACtcattttggcttttttt
aaatatcaacTGCAACAGCTAAACAATCTTAATTTCAAAATCCTTTCTTT
CAGATGACAATTACTTAGATTTTTCGGACGGCATTGTCCGAAAATCGATC
ACCAATTCAACTTACTCTGATCGGATTCTCACACGACAAGAAATGGTAAG
TTAACTTCTTAAGGTCGGAATCCTGATAGAGATTGAGATTTGAAAACTAG
TCGAAGTCTCTCGGTTTACGCTACCATCTTAAATGAATTGATATGCACTC
CTTGAAAGGAGCACAAAAAAAATGGCCTTggtttttaacatattttttct
GTGGAGATTGTTGGAGCATTAAGTAGAAAAGATGAAGGGCCCGAGTCAAA
TTTCGAAAACCTACACTGAATTTAGGCTTTTCGACATGTTTTCATAGCTA
TATTTCAATAAATCTTCAACAACATTTTCACTATTATTGTTAAATTGTTA
AATTCAGTTGTGGACAGTAAATGTGAAAGCAATTAAAAGAACAATCTTCA
CATTGTTTCAAATCAtcttattttatgttttagGTTGACAATAGAATCAG
TCGTTCACTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCA
ACAATACTAAAAAGGTGAGTGAGGACTTCAATCCCATTATTTGGACTCGA
GATATTTATACCCATCACGTGACTCAATGAGCTACAGGCTACCCTGAAGG
AATGACAGACACCCCGAAAAGAATTCGGTTTTTCTTCTAGAacaaagaaa
tgaaatgaaactcGTTTTCGGAGCAAGTCAGCATCATTTTTATGGCGTTT
ATGTAATGACTTATAATTGATTGCCTTCTTTACAGCTATATCGACATTCC
TTCTACGCTGACTATTATGTAAAAGAGAGATCTACAAATAGgtaatatta
ttttgttttcacaaaAACAAGTTATTAGTTAAATACACGATTAATCAAAA
GGTCATCCTTTCATTTAAGCATGGGCTTAACTCGGTTGTTcggttgaaac
tttttttttcttttttagagtaATCAAACTACATAGCCCGGACGGAGATT
CGGATGAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATT
GTAAGAATGTGTTATTTATTTTAATTCCAATCTCTCATCATTAAGCATTG
TATTATAGTCTCTGTAGTATCTTTATTAACAGTTACATTTGTCCCTTATT
TATAAATGCACTCCAGCATTATAGCAAAGCTTAAATCAAACTTATATGGT
ACTCGATGTTTTTTTTCCGACACGCTGAAGgtcggaaaaacttttcatAT
CTGGATATTTTGCCTGGTCATGCAACAGAATTGTTATTTGGAAGTCTTAG
CCCTTGTTTTGGGGATCGTTGAGTCCAACCGCAATTTTCCGACCTTAACA
CGGGCAGTTGAATTACCCTCCCCCACCGTTTGGCACACTCCTTCAGCTTC
TGTTTGGATGGCTACTAATACACCATTGGAGTATCAGATGTATTTGGAAT
TTGAATTCAACGAATGTAGTGAGCCCCATTGCAAGCACAAGCTGCAGTGA
AATACTGCGACgtaaaattttacaattttaaaattcaaagtcGTTAGGTT
AGATAGTTAAAGCGTCCCCTCCTGAACATATAAGCTTTGTCTTCGCAGGT
TTTCGTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAG
ACATCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTC
AATGGCGTTCCTGATTGGGTTTACGAAGGTAAATAAAGGTTACcgtatta
ttttttattaaaagattTAGTCGGCTTCAGAAAGACGAAATTACGTTAGG
TTTCTTTTATCAAGATCCCGAGTCTCCTTGCATGGGTAGATTTTAACTAT
TTTGTCTACAGCCTGtccagaaaaaaagttgaacatatTGATGaagtaaa
atctttaaaactcattttttcattctataataaattgctcaaaaaaataa
attttgctcTGTTGGCACAATTTTGTAAGTCCGTGACAGTGATATCGTTG
AATACCGAAACGCGCATGTGTCGTTGGTATCCTTTGGGATGGTGATTTTA
TTCATCCTACGCTACACGTGGTTTCTGGAGTGATCGAGACCCGACGCTGT
TCCCGAGTGGGCTTCCAGTGTGGCGTTATGGAGCGCCAAACCAGTTAAGG
CTGGGTCCATGTCAACATATTTATTTAAGTTTTACCCCGAATATCGGCCT
GGCTGACGTCAGAGAGGAGAGACAATGACTAAAGTTAATTTCGATCAATA
TCTCATAAATCCAATATGTTAGACATGTCGAGAAGTCGGGAACGAactat
tagcgagtttatgtatttgcgcttttgaggacggtaaagtgactgaagtg
atttggaataacccgtaATTCTGCCCCGCAAAATCATGGACGATAatagt
gctgatttaccgtcgtcctcagttggtcatgatctagtcaaattagaacc
ttaccgtctccgtcgctgaaaaacacacatacataaactcggtatcgACT
CTGCCTGGCCGGTGCCATTTCCGAACGAACTCTTTACTCTCTCCTCTTGG
TAGCAGGATCTCTTTTCTCATTCCGATCAACACGATACTTCCCGACGAGA
GGACTTGCCTCGTCCAAGTGTTTTCTCTCCTAATGAATTCCCTATCTAAC
GTGCTCAAAGTGAGCTTCCATCCAAAGGTTTCCATTACAATAAATGTGAA
TATAAAAATTGTGTACCGTGCCCTCATGACAGTGGGCTTGAAAGCTCAGT
CGATAGAGTCGTGTTGGCGCATAGATTCTATTCCACTTTTTTCCGTACAC
AAAAGATTTAAAATACAGAGGAGAATTTTTCTGCTCTTCTcacttttcca
ttttttctcatttcagaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGT
TTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAAT
CGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGAT
ATCGATCGAATCGCTTATCCGAAGGTAATCAGGTCAACATTAAtgcattt
ttggacctaccgggaggtcctttaatttgaccgttgtccgttcgtctgtt
acaagcttttctcgggattggctcattagttttttttaattttttgcaca
atgatacaaaatagtaatgcttaaaaagtgacggagcccgattttgaaaa
agaaatttggggGAAACTTGGGCCaaaaaaactacctaaaaatcaggttt
tttggactttgtgcaaaattgcttcattagtttttcctgacttttggcag
aaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttctcg
gaaaattttttttcgtcgtcaaatacggattttcgcaaatttgggccaaa
aactacctaaaaataaggttttttggacttggtgcaaaattgcttcatta
gtttttcctgacttttggcagaaagatgaagtgcaaggcaccctaacatg
tggctgaagtaatttttctcggaaaattttttttcgtcgtcaaatacgga
ttttcgcaaatttgggccaaaaactacctaaaaataaggttttttggact
tggtgcaaaattgcttcattagtttttcctgacttttggcagaaagatga
agtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaaattt
tttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacct
aaaaataaggttttttggacttggtgcaaaattgcttcattagtttttcc
tgacttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaa
gtaatttttctcggaaaattttttttcgtcgtcaaatacggattttcgca
aatttgggccaaaaactacctaaaaataaggttttttggacttggtgcaa
aattgcttcattagtttttcctgacttttggcagaaagatgaagtgcaag
gcaccctaacatgtggctgaagtaatttttctcggaaaattttttttcgt
cgtcaaatacggattttcgcaaatttgggccaaaaactacctaaaaataa
ggttttttggacttggtgcaaaattgcttcattagtttttcctgactttt
ggcagaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttt
tctcggaaaatttttttttttgtcgtaaaatacgaattttcttttttggg
ggaaattctgttttaccattttcctgttagcagcttttctcgggatcggc
ttattatttttttttcattttttgcacaatgatacaaaatagtaatgcct
aaaaagtgacggagcccgattttgaaaaagaaatttggggTAAACTTGGG
CCaaaaaaactacctaaaaataaggttttttggactttgtgcaaaattgc
ttcattagttttttctgatttttgtcagaaagatagagtgcaaggtacct
taaaatgtggctgaagtaatttttttcggaagattttttttcgtcataaa
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNgacgaccaagttacacaatgataaaagaaaataaatc
agacgtttttgcattgttctaaaacttattgtgtttgctcaataccaata
gtaaaatgtagaacgcctacttttatctgattttgatcaacaggtaggtc
cattcagcatgttgcttgtctTCCTAATTTTAATGCATCGTatcaatgga
aaaaatttcactctCTCAAGCTCTCTGGATATTGAATAGATCTTTCCCTT
ATGGAAGTTTTTATAGCCCTGTCTTTCAGTAAGGATGAAACTACTCACAT
GGTACtgcttttgaaaacttttgctTTTCTCGGCAAATGACCTTATTGTT
GTAGCTTCTATGCAatctattgagtttaaagccctaAAGTGGCTGGAGAG
AAATCTTTAACCtatctcaagcaagaaaaagtgaaactttaAGATTTGAG
CCGCATTTAGAATGACGAATTGAATCTagccctttctttgtttttgcgCA
ACCGGGcctttagaccatgttcacacacTACTGTTCCATTTCGCTCAGgg
atgattttcgttacggatcgagggTATTcgtattggtttcggaacggaGC
AGTTTCGTTCCGAtgaaaaagtggagcgaaacctttttgatctgttttgc
tttgtgaCGTCTTCTTTCTTgatgtttcgaattttgacgttcacacttgt
ttcggaactgtttcgtttcggaacggaaagaaaccgtaacgtctgaacat
ggtcttaaagTCAATGATATAATCCTGTAGTATCTTTAACTTCCTTTTTT
GACGATCGGCGTGGTGTTCAATGTTAGTTTTATTATTGTTCTTCCAGGCT
GGTTTTCCGAACCCAACCAtcgaaatcaaaatcatcaatcTGCAGAGTGT
CTTGCAAGAAGATAatagtgtcaaaaatttcacCCAATATAAAAAGATCC
TAAGTCCACctgctaaaatctcaaaagggTGAGTCCGTGATTGAAGATTA
ACTCAAATTCAACACGAGAACATACCGATGTTGCAGGGGAGGATAGTGTC
CTTTcctttttatatcaattttcaaCAACAGCCCTCCTCCTTGCATGATT
TGAAACTGAAAGATTAAAATGTCTTCCCTCTAAGCTATTAATAGAAGAAA
TGATATGGAAATATTACAGAGGATTAATTGAGATGAGTGTTTCCTTTTCA
TTTCTACCAGTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAAC
GAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTAT
GAAGTACGATTCGACAAACGGACAACCAACAACTGTAAGTTTATGAAAGT
Acttcccagctggtacacaacgttgactcaacgttcatctaacgttatat
ggacgttgtgaacgttgtGTGCTTACAGTTgattctcgctaattcgaact
cgaaaggGGAATATTGGTTTTTTCGAATTAAGGAGAAATTCGAGTTaaag
catgattatttcatagaggtcgatagacctgggaaatatattactgtaaa
ttaaGTTGAGAAATTAAATTAAGAGGGTTTCGCCTTGACGGAAATtggga
ataagttcgaattatagaaagattcgaataagagaagttcgaataagcga
gtcCAGTGTATTAGCCAGGGcccaaaacatttcaaattcaacGTTGAGTG
ATTCTGATTTAAACGATAAGAGTTAAAAATGGAATAAATCTTTTTCAGCT
TCAAGAATACAATACACCAGGTGGATGGATAGACGATGATGTAGGTGACA
TTACtaattcatcatttttcaatCTGCTGCTTTTTTCCAGTACTAGAAAT
TGTTTTCTAACAATCTCGTTTTGCAACGGGGGAAAGTGCTTCGTATGTTT
TGTATGTTCAGGTTTCCAAGTTTCCAACTGTTTTAAAGAATAAGAAAAAC
AATGAACATCCAGAAATGTTTATCTAAGGgtcgtaattttcaaaaaagca
acaaaaatgttaaaaaactcTTTTGGAGAACGTCTCCGTAAGTAGCAGAC
TCTGCCTCTTGTCCGGCATCCTTCAAACCTAATAAATTCCGGGTATTTTG
CATTCCTTATTGTAAACAAACTTAAAGAGGTCAACGTGCATTCTTTCAGT
ACACCAAACCAAAGTTTGCCAAAGACAATTCCAATTATATCACGCTATTG
CCACACGAAGATTTTCGACATTTGGCTAAAGTCTCGATGAATCCCaaggt
atgaacttaatttttccTTCTATCAGGAGGCTAATTAGCTAGAGGGATGC
TAGCAACCTAACCGTTAGGATTTTTAGGGTTTTAACCGTTTGATTTTTAC
CAGAACCTTTTTTGACGGCCGTTAGTCACAGAGGATTGCTttacttaggc
aaaaagagATACAGGGATAAACGAATGACCTGGGGAACCGTTTCAAATCC
GTCAGACTCGAGCATAGCTTttgaaaaacacaaattaaaaaattagcCTC
TTTTAGCCTACCTTTTTATGAAAAACCCATCAGAAACACACCCCTTGAAT
CGACAAGGATAGTCCCTTAAGCCCCCCGTAAAGGCCGTAAAATCCGAAAG
GAGAAGTTTGTATTTCACTAGCCTATAATAATTGTTTCCGCGTTTCGTTT
AGAATGGCCCTGAAGTGGAGTTTTTGACGGATGGAAAATTCATGGTTGTG
GATATCAACTGTTACAACGCGGATGATCAAATTTTGTAAGTTGGACTCAT
TTCCAAACCACCTTCAATATATTACTTCAAGAGAAGCATGAGAAAAATTG
TAAATCATTTTCCGCTGTctcattttttttcagatattaTCGAAGCACCC
AAGAATCTCCTGCACAACGTCATGTCTATCGAATCAATTTACAAACCAAA
GAAAACAGTTGTATCACTTGTGACTTGTTGAAAGGTAAGACATGCAACTT
TACAGAACTCTTCTAACTGGTGGAACAACTTTAACACGGAGGGCTTAAAA
TGCTTAATACATTCGCTTAAACTTCTAGACTGATTCCCTGACCTCTAAGG
ATAAATTCCTAAATAGAAATTATAACCGTGAAGTTTTTTCGTTAGAGAAT
GGATAAACTAATTTTTAGCTCAAATAGTTGGATAGAGTGTCGTCCAACAG
CCTTCTTATTTCTGCcgagaaaatttgaagaatacTGAAAGCAGAACAGA
AAGCTCAACCCACTTTTCGTACTTTTGGTTAATTTTTTGAGCTTTGTGAG
TTATGATAACGCGCTTAACATGTCTATGTGAAAATTAGGTTGTTAGGTTA
TACAAGTTCATCTGTGCATTCATTGAGCAGagtcttttagtgagttaaag
cATGGTGTTTGTTTTTCCTTTCTGGTAGTTTACATATCTCGTTTGCAGGC
TTGATTACTTCCGCGATGAAGAATAAATGTTTCACCATTTCTGGTCTGTA
TTACAAAGGGACGAGATTTCTGGATTTCTAATATATTTCTATTGCATTAT
TGTAGACAGTGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCA
AGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTA
TCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAA
TGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAAT
TTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGC
CCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTA
TGGTGGTCCAAGCACGCAAAAggtaaaagaaattttctttggaaGTTATT
CCCTTTAGGTGTTGATTGGCTTAATAATTATATGGAGAAGTAGAAAATCC
CTTTGAAGCTATTTCCTTACAGGGATGCTAGAAAGCCTGTAAAGTATACA
GAAAAATACATTTTGGCTTTCGGAAAGAAAATTAACCTCACGGTCTGTAA
AACAAATGGTTCTCTACCAGCCAGTCGGTCTGATGACAATAGCttgaaaa
atttagcaaaaaaaaatttagcctTTTCTTATTCAAAAAGTTCTCAATAC
ACGTCTTGAAGGTTGTACTGTAAATGCAAGGTGTTTCTGATGGACTGATT
CTTTACAATCCTCGCAGGTGACAGATCGGTACAGTTACGGATTCGATCAC
TTTTTGGTATCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGAGG
AGCTGGTTACTATGGTTACAAGTATGTTCGTTTAACATTAGCGAGGTTAA
TTTTGACtgtaaagtgcgataccgtaggcctgtatataacttgccaaagc
aaatcatacaagtgaaatcttatgtaaAGGCCTACGATATCTCATTGAAA
GGTCTAAATAAAAACTACTCAATTCTGAAAGGAAATAACTGTTTCACGCT
GAAATATTGTGGTAGCATGACATGCATGTCgtttattttcattcagttta
ttcaaaacaatctcAGTACTACAGTTAAGCAAATAAAGACTAAAGTCAGA
CTAGATCCCGATTCCATATTCCTCCTTCTATTGGTATAAGTCGTACCAGC
GTactttacaaatttgaaatctATTTTCGATTTATAATTGGATGCTCTGA
CGTTTTTCCCGGACAATTCAACTTTACGCTCCCTTTTCAGTAGAAGTTTT
CCTGAGCTAAATTTAATGTGTAAAAGTTTACTTTCTGTTCCTTTCTTTAG
GTTTATGTACGCAGTCTACAAACAACTTGGTCATTATGAAGCCGTCGATG
CCGTTAACGTTGGCAAGTAAGTCCACTTGTGCTTGTATATCGTTGCTTGG
GGCTCGAAAAAAGATCCCGATCATTTATCTATTGGAACTTTAGTAAAGCA
GGGTTACTAAAACCCAAGTATTTGATCATTGACACGGGCAATTATTCATG
AAGAAATAGATAAAAATCAGCTTCCATTCGATGTTAAGTTTGGAGATGTA
TACCCAGCATTCTATTTTTTGCGTGTCCCTGAATTTTATACATGACAGTC
CACAAATCTCAGAATTTTAGTTCTCACTTTTGTAACAAAATAAAGGTTAA
GGCCACTGGACTTTCATATTTCATTTATTCACTTTCCAGGTACTTAAAAA
CACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGGTGAGT
AAAAATGTGCTTGTTAATCCTACTGGCATCAAACATTAAAGAACGGTCAT
CTCAGGTCCatcgaaaatatcaaaaaacgtTCTTCTAACATCAGCAAACC
CGAACTAACGTTGAAACACAATCTCGTTCCCTGTGCCATCAGTAAGCacc
aaaaagctgataatacactAGCGTCAaccagtaacgtaaataaagcctgg
gatgcacggggacgaggttggccGAAACACTGTTATGAAACAAGTTTata
gaaaagtgaaaaagttttcaatctTGATAATATTTCTTTTGTTCATTTCA
GTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGACG
TCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTAT
GGTAATTCTTATTTCATTATTATGATAACGCTACTGTAGCAACCAATTTT
ACGATGTTTTTTGGTCGAAAGAGTAAGATTTCTTTAGATTACAGATTCTT
TCGTTTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCC
GATTTcctcaattcaaaatttcctctACTGACCTTACATACCTTAAATTT
CCGGGAAATTGTATATTGATGACCTAACGAAAACTTCCTATCCAGTGGTG
ATTTACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGctcacacttt
tttgaaaaataacctttTTTGGCCTTATATAGTGATCATGACCTATTGAC
AAATGGCCGGTTTGAATAAATGTTTGACGCGCATGATCCATTAACAATCA
ATCCCAGGATCTTATACTTTTGTTTCTACTTTAGATACTGTTTACACTGA
AAGATATATGGGACTGCCTACACCAGAAGATAATATTGCTGGGTATCAGG
TTAGTAGAGTGGCTCAGTCCGGAAGAAGCCATATAATCCTATTAACTTTC
GTCTATAAAACCGAACTGACCAAACTAAATCTAAAGGTGATGTCTAAGTT
TTCTTGAGTGGAGTTTAACTCTTGCATGATTAGAATAACCGTCGTAATAT
TACGTATTTTCGAATCTATGATAACAGGAACATTGATATCTTGATTTTTA
CTAGAGTACGAGTGTCTTGAGCATGACAAAGAACTTCAGAGGGAAGAACT
TTCTACTGATACATGGCACAGCAGATGGTGAGAAACCATTTCATTGTATA
GTGCTAATTAGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCACTGA
TTACGCAATCACACCAAAATAATCCAATGACGATCTtgtatcgttttttt
tttcatcaaaaatctCTTACATCAAATTTCTTGTCCATTGAACTACTTTT
AATTCAAAACTTTTATGCACttctaaattttctttcgtAGATAACGTCCA
CTTTCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCA
AATTTCGAGGACAGGTGTGTTTCACTTTTGCCAGCATCGACTGGTATTTT
TAATGGTTATTTCAATTGTTAATTTGCGATCTTTTCTCTTATGGAGTTAA
ATTTagaccaaaaaaattgaaatgaaaattttaattctccTACATAGAGG
TTACTAGCTTTATCATTTCCTTTTTGGTTTTTGGTGAGTTGACTATTTTA
TAAGAAGCTTTTCAATGTTCATCATTTTCAGTTTTACACGGACAAGAGAC
ATTCAATACAAACGAGTNGCAACCAATTTTACGATGTTTTTTGGTATTTA
GTGCTACCTTGGACTCTGATAGAGTTCAATCCTCCCAGCTtagaaaaaca
taaaataagcaaatttctttttcgtatagtctatttgatttgattttttt
ttttaacaaagttaATCTTTGGACGATTTTTTGTTAGTCGTTTACCGTCT
AGTGGTAGCTTTATTACCAATCATTTGTTACTCAATTTTATCGTGAAAGA
TTAACGGACAGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAAAC
TTTCTGCGTAGGCCTCCGATTTcctcaattcaaaatttcctctACTGACC
TTACATACCTTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAAAG
CTTGCTAACCAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTTCA
AAATATGctcacacttttttgaaaaataacctttTTTGGCCTTATATAGT
GATCATGACCTATTGACAATAATAGCCGGTAAATGGGCGTTTTTCTTCGA
GTAAATGTTTGACGCACATGACCCATTTACAATCAATCCCAGGATCTTAT
ACCTTCGTTTCTACTTTAGATACTGTTTACACCGAAAGATATATGGGACT
GCCTACACTTGAAGATAATATTGCTGGGTATCAGGTTAGTAGAGTGGCTC
AGTCCGGATGAAGCCATACAATCCTATTACCTTTCGTCTATAAAACCGAA
CTGACCAAACTAAATCTAAAGGTGGTGTCTAAGTTTTCTTGAGTGGAGTT
TAACCCTCGCATGATTAGAATAACCGTCGTAATATTACGTATTTTCGAAT
CTATGATAACAGGAACATTGATATCTTGATCTTTACTAGAGTACAAGTGT
CTTGAGCATGACAAAGAACTTCAGAGGAAAGAACTTTCTACTGATACATG
GTACAGCAGATGGTGAGAAAGCGTTTCATTGTATAGTATACTTAGTTTCA
TACTCGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCAATCACACCA
AAATAATCCAATCACGATCCTGTACCgttttttataaataagaaatgaat
taaaattaaatcaaaaatcttgTACATCAAATTTCTTGTACATTGAACTA
CTTTTGTGAACATTGAACACGTCGCTCCCCTCGTATACTACGAACTAGTG
TAATAGCAACGAATCGATAGCGcagttgggagagcaatcgcccggcaagc
gagaggtcgtgggttcaatccccactcgatttgttacctttgagaaaact
gggaagtacattagtgcatgatccgttgattcattactgAACTACTTTTA
ATTCAAAACTTTTATGTACTTCTAAATTTTCCTTCGTAGATAACGTCCAC
TTTCAAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAA
ATTTCGAGGACAGGTGTGATTCACTTTTGCCAGCATCGACTGGTATTTTT
AATGGTTATTTTAATTGTTAATTTGCGATCTTCTCTCTTATGGAGTTAAA
TTTAgaccaaaaaatttgaaatgaaaattttaattctccTACATAGAGGT
TACTAACTTTATCATTTCCTTTTTGGTTTTCGGTGAGTTGACTATTTTAT
AAGAAGCTTTTCAATCTTCATCATTTTCAGTTTTACACGGACAAGAGACA
TTCAATACAAACGAGCCATGTTTATTATTTGATTGCTGACTACCTTATGG
CGCATCTGAGAAATGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAA
AATTACCCACTCAAATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCA
TCTTTTGTCAAATTAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAA
AGTCTCCGTGGTGGACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTG
AAGCCAGGACATCTAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCT
GGGAGGTTATCATACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGG
TTATTCACTTAATTAAGAAAGAGGACGAATATATTTGAAAATCCAATTTT
GGTTAATGACTGCAAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAA
TTGAGGAAACCAACGAATGTTGTTTTTCGaaggttaaattttgattttct
tataaaataatgtAATCGAGATCAAGTgctaaaaatcattcaaaatctGC
TTTGAAACGAAAAAAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCG
GAAATCCTACGTTATATACACATTTTTGCTTTTAGATAAAAATACTTCAA
AACTGCATTGCAAAATGTGAAACTTTaaggaaagtttatttttgagTTAA
GTACTTCTGGTGTTCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGC
AGTGATAGTGACAAGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGA
AACAAGCGAGGGGTAAATTACTCAGAAAacatgattttttaaaaagaata
aaagaatcGTACCAAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACA
TAGAAATGTTTTGGCACGTacgtagacgatgctatcgtccgtttagaggg
tcagtaaacgTGAGAAAGTACAGAGTCAGGAcatcagggcggtttacggg
gaaaaagtggcggtagagttttggaacaatgTTAGACAATAATTTTTACA
CTGTAAACACCTCTGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCT
CAAATTTATCCCGCTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgta
gacgataggatcgtcagCACGTACTTTGTGACATTATCTtgtataatttt
gattttttaattttgtttaataattgtttattatttactatgtgtaaaag
aaaattatattGTGTAAATTGAATTTTAGATGCCCGAACAATACCCGCTA
AATATAATGAAAGAAATTATCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:309281..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0290858	0.025961	0.00754541	0	0	0.021176	0.703699	0.750282	0.0197729	0.0506274	0.0701413	0.0180958	0.569205	0.0221101	0.107915	0.134277	0.0272631	0.0249782	0.0946804	0.244783	0.16281	0.0292941	0.0516942	0.248351	0.121055	0.662121	0.490498	0.957453	0.0089739	0.705853

Blast

[Close]

BLAST of TCONS_00060387 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 3.049e-120
Identity = 247/749 (32.98%), Postives = 413/749 (55.14%), Query Frame = 1

Query:  112 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2283
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060387 vs. Swiss-Prot (Human)

BLAST of TCONS_00060387 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	3.049e-120	32.98	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

You are here

TCONS_00060387 (transcript) - C. hemisphaerica