TCONS_00060381 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060381
Unique Name	TCONS_00060381
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3557

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:308940..325216+

transcript sequence

>TCONS_00060381 ID=TCONS_00060381|Name=TCONS_00060381|organism=Clytia hemisphaerica|type=transcript|length=3557bp
TCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTC
AAAAAAGACAaagaattGAGTTCGGAAACGTTGATCAGTCCAAACAGACG
ATTTACATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCACTGCAA
GCATTTATTGGGTGTCAGATGACAATTACTTAGATTTTTCGGACGGCATT
GTCCGAAAATCGATCACCAATTCAACTTACTCTGATCGGATTCTCACACG
ACAAGAAATGGTTGACAATAGAATCAGTCGTTCACTAGCCAGACTTTCGC
CAGATAATAAATGGGTTTTACTAGCCAACAATACTAAAAAGCTATATCGA
CATTCCTTCTACGCTGACTATTATGTAAAAGAGAGATCTACAAATAGagt
aATCAAACTACATAGCCCGGACGGAGATTCGGATGAGCAGATACGACTTT
GTACTTGGGCAAACAATGGAAGTGCTATTGTTTTCGTCTACAAATGCAAT
GTGTATTACATTGCGACTTTGGAAACAGAAGACATCAAGTATTACCAGTT
AACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGCGTTCCTGATTGGG
TTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTTCAGCT
GATGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAATCGTATTT
TAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGATATCGATC
GAATCGCTTATCCGAAGGCTGGTTTTCCGAACCCAACCAtcgaaatcaaa
atcatcaatcTGCAGAGTGTCTTGCAAGAAGATAatagtgtcaaaaattt
cacCCAATATAAAAAGATCCTAAGTCCACctgctaaaatctcaaaaggTG
ATTATTATTATTGCATTATGACTTGGAGTCCTGGGAACGAGTTGTATGTC
CAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTATGAAGTACGATTC
GACAAACGGACAACCAACAACTCTTCAAGAATACAATACACCAGGTGGAT
GGATAGACGATGATTACACCAAACCAAAGTTTGCCAAAGACAATTCCAAT
TATATCACGCTATTGCCACACGAAGATTTTCGACATTTGGCTAAAGTCTC
GATGAATCCCaagAATGGCCCTGAAGTGGAGTTTTTGACGGATGGAAAAT
TCATGGTTGTGGATATCAACTGTTACAACGCGGATGATCAAATTTTatat
taTCGAAGCACCCAAGAATCTCCTGCACAACGTCATGTCTATCGAATCAA
TTTACAAACCAAAGAAAACAGTTGTATCACTTGTGACTTGTTGAAAGACA
GTGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCAAGAAGTGT
ACGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTATCTTACAT
GGTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAATGAACATG
TTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAATTTTATACT
ATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGCCCTGCGGG
ATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTATGGTGGTC
CAAGCACGCAAAAgGTGACAGATCGGTACAGTTACGGATTCGATCACTTT
TTGGTATCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGAGGAGC
TGGTTACTATGGTTACAAGTTTATGTACGCAGTCTACAAACAACTTGGTC
ATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTACTTAAAAACACAA
CCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGTCGTATGGAGG
ATTCTATTCATCAACTGTGATGGGAATGGACAGTGACGTCATCACGACGG
CCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTATGATACTGTTTAC
ACTGAAAGATATATGGGACTGCCTACACCAGAAGATAATATTGCTGGGTA
TCAGAGTACGAGTGTCTTGAGCATGACAAAGAACTTCAGAGGGAAGAACT
TTCTACTGATACATGGCACAGCAGATGATAACGTCCACTTTCAAAACGCA
GCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGAGGACA
GTTTTACACGGACAAGAGACATTCAATACAAACGAGCCATGTTTATTATT
TGATTGCTGACTACCTTATGGCGCATCTGAGAAATGTTGAAATCCCCGCT
GATTCAGTATTCGGACTAAAAAATTACCCACTCAAATGAAGAAGAAGGCT
AGTCAAACCTGAATTAAAGCATCTTTTGTCAAATTAAGAACTTAAAAGCA
GATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGACAATGGAAAGTGTT
GGCGGGTAAGAGACCATGGTGAAGCCAGGACATCTAAAGATAAAGAGCTC
CCACGCATTTGCTTCGATGCTGGGAGGTTATCATACTGAATGCAGAATCG
ATGAATGCGCTTCCAGGTTGGTTATTCACTTAATTAAGAAAGAGGACGAA
TATATTTGAAAATCCAATTTTGGTTAATGACTGCAAATCTGCAAATTGAC
ATTTTGTTGGGTTGGCAATAATTGAGGAAACCAACGAATGTTGTTTTTCG
aaggttaaattttgattttcttataaaataatgtAATCGAGATCAAGTgc
taaaaatcattcaaaatctGCTTTGAAACGAAAAAAAGAAAGTGATATTT
CGTTTCAGCTTAACTCATGCGGAAATCCTACGTTATATACACATTTTTGC
TTTTAGATAAAAATACTTCAAAACTGCATTGCAAAATGTGAAACTTTaag
gaaagtttatttttgagTTAAGTACTTCTGGTGTTCTCAAACAAAGTATC
TCTCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGTCATGTTCATAATC
CTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAAATTACTCAGAAAa
catgattttttaaaaagaataaaagaatcGTACCAAACCTTTGTGATTGA
TCTCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCACGTacgtagacga
tgctatcgtccgtttagagggtcagtaaacgTGAGAAAGTACAGAGTCAG
GAcatcagggcggtttacggggaaaaagtggcggtagagttttggaacaa
tgTTAGACAATAATTTTTACACTGTAAACACCTCTGCCACTGTTTACTCC
ACCCCAAACTAAACTCGTTCTCAAATTTATCCCGCTTCCTGGATTATTCC
CTTTTTCAGTGAtaatgtgtagacgataggatcgtcagCACGTACTTTGT
GACATTATCTtgtataattttgattttttaattttgtttaataattgttt
attatttactatgtgtaaaagaaaattatattGTGTAAATTGAATTTTAG
ATGCCCGAACAATACCCGCTAAATATAATGAAAGAAATTATCGTCActaa
atcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:308940..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060381 ID=TCONS_00060381|Name=TCONS_00060381|organism=Clytia hemisphaerica|type=transcript|length=16277bp|location=Sequence derived from alignment at scaffold_341:308940..325216+ (Clytia hemisphaerica)
TCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTC
AAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTCTGCAATTTATACT
ACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCT
CGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGT
CTTGTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCA
TCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGT
AAGTATTTTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCATTGTT
CTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACT
AGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTCTGCAAT
TTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCC
TCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTA
GATCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTG
ATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAA
AGACAGTAAGTATTTTCTGGATCAGTCTGGTCTGCAATTTATACTACTAT
CATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTCT
TCATACTAGCACTCAAAAAAGACATTAAGTATTTTACTGACCAGTATGGT
CTGTAATTTATACTTCATGTAGTTCCCGGACCAACATAATTGTTCTTGTC
CTTTTGATCTTATTTAATCAACCTCATCCTTGTTGCTTCAAATTAGCTCT
AAACAGaaagtaaatattttaatgagtagtctggtctgtaatttataGTT
TATCTTATTCCAAGACCAACATCATTATTCtagtcatttttgtttttatc
tcaATCACCCTCGTCCTCGTTTTAATACTAGCTCTCAAAAAAGACAGAAA
ATCTTTTACGGGCCAATctgtcaaaacaaacaaaagagaTTCCAACAAAT
CAACCTCGTACCCAGAGTCCATTgaaccactttttgattttactcatGAA
CGTGTTCGTTCAACTGTGAGAGCTATCATCGTAATCATAAAGTGAACAAA
GGGAATGGGTTCGAGTTTGTCTAATAAACAAAACTctaattctcaaattt
tcagaagaattGAGTTCGGAAACGTTGATCAGTCCAAACAGACGATTTAC
ATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCACTGCAAGCATTT
ATTGGGTGTCAGGTAAGATAATAATCTAAGTCCTGGAAATTCTACCTATG
ATAATAATTATTAGGACAATCGCTCCATGGACAATCttatattgtaattt
tttttcataagatgGAGAGGTGATAAcactaaaaagttaaaatatttatt
ttctctgtctttggaaatattttatgaaagGAGCTGCTTCAGATAACAAA
ATTCCGGAGTAGTTTCCCGGGCGAAGACAGTCAATCGGGATGACGATCCT
TATTATCTGGGAAAATGATTTGACtcattttggctttttttaaatatcaa
cTGCAACAGCTAAACAATCTTAATTTCAAAATCCTTTCTTTCAGATGACA
ATTACTTAGATTTTTCGGACGGCATTGTCCGAAAATCGATCACCAATTCA
ACTTACTCTGATCGGATTCTCACACGACAAGAAATGGTAAGTTAACTTCT
TAAGGTCGGAATCCTGATAGAGATTGAGATTTGAAAACTAGTCGAAGTCT
CTCGGTTTACGCTACCATCTTAAATGAATTGATATGCACTCCTTGAAAGG
AGCACAAAAAAAATGGCCTTggtttttaacatattttttctGTGGAGATT
GTTGGAGCATTAAGTAGAAAAGATGAAGGGCCCGAGTCAAATTTCGAAAA
CCTACACTGAATTTAGGCTTTTCGACATGTTTTCATAGCTATATTTCAAT
AAATCTTCAACAACATTTTCACTATTATTGTTAAATTGTTAAATTCAGTT
GTGGACAGTAAATGTGAAAGCAATTAAAAGAACAATCTTCACATTGTTTC
AAATCAtcttattttatgttttagGTTGACAATAGAATCAGTCGTTCACT
AGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATACTA
AAAAGGTGAGTGAGGACTTCAATCCCATTATTTGGACTCGAGATATTTAT
ACCCATCACGTGACTCAATGAGCTACAGGCTACCCTGAAGGAATGACAGA
CACCCCGAAAAGAATTCGGTTTTTCTTCTAGAacaaagaaatgaaatgaa
actcGTTTTCGGAGCAAGTCAGCATCATTTTTATGGCGTTTATGTAATGA
CTTATAATTGATTGCCTTCTTTACAGCTATATCGACATTCCTTCTACGCT
GACTATTATGTAAAAGAGAGATCTACAAATAGgtaatattattttgtttt
cacaaaAACAAGTTATTAGTTAAATACACGATTAATCAAAAGGTCATCCT
TTCATTTAAGCATGGGCTTAACTCGGTTGTTcggttgaaacttttttttt
cttttttagagtaATCAAACTACATAGCCCGGACGGAGATTCGGATGAGC
AGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTAAGAATG
TGTTATTTATTTTAATTCCAATCTCTCATCATTAAGCATTGTATTATAGT
CTCTGTAGTATCTTTATTAACAGTTACATTTGTCCCTTATTTATAAATGC
ACTCCAGCATTATAGCAAAGCTTAAATCAAACTTATATGGTACTCGATGT
TTTTTTTCCGACACGCTGAAGgtcggaaaaacttttcatATCTGGATATT
TTGCCTGGTCATGCAACAGAATTGTTATTTGGAAGTCTTAGCCCTTGTTT
TGGGGATCGTTGAGTCCAACCGCAATTTTCCGACCTTAACACGGGCAGTT
GAATTACCCTCCCCCACCGTTTGGCACACTCCTTCAGCTTCTGTTTGGAT
GGCTACTAATACACCATTGGAGTATCAGATGTATTTGGAATTTGAATTCA
ACGAATGTAGTGAGCCCCATTGCAAGCACAAGCTGCAGTGAAATACTGCG
ACgtaaaattttacaattttaaaattcaaagtcGTTAGGTTAGATAGTTA
AAGCGTCCCCTCCTGAACATATAAGCTTTGTCTTCGCAGGTTTTCGTCTA
CAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACATCAAGT
ATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGCGTT
CCTGATTGGGTTTACGAAGGTAAATAAAGGTTACcgtattattttttatt
aaaagattTAGTCGGCTTCAGAAAGACGAAATTACGTTAGGTTTCTTTTA
TCAAGATCCCGAGTCTCCTTGCATGGGTAGATTTTAACTATTTTGTCTAC
AGCCTGtccagaaaaaaagttgaacatatTGATGaagtaaaatctttaaa
actcattttttcattctataataaattgctcaaaaaaataaattttgctc
TGTTGGCACAATTTTGTAAGTCCGTGACAGTGATATCGTTGAATACCGAA
ACGCGCATGTGTCGTTGGTATCCTTTGGGATGGTGATTTTATTCATCCTA
CGCTACACGTGGTTTCTGGAGTGATCGAGACCCGACGCTGTTCCCGAGTG
GGCTTCCAGTGTGGCGTTATGGAGCGCCAAACCAGTTAAGGCTGGGTCCA
TGTCAACATATTTATTTAAGTTTTACCCCGAATATCGGCCTGGCTGACGT
CAGAGAGGAGAGACAATGACTAAAGTTAATTTCGATCAATATCTCATAAA
TCCAATATGTTAGACATGTCGAGAAGTCGGGAACGAactattagcgagtt
tatgtatttgcgcttttgaggacggtaaagtgactgaagtgatttggaat
aacccgtaATTCTGCCCCGCAAAATCATGGACGATAatagtgctgattta
ccgtcgtcctcagttggtcatgatctagtcaaattagaaccttaccgtct
ccgtcgctgaaaaacacacatacataaactcggtatcgACTCTGCCTGGC
CGGTGCCATTTCCGAACGAACTCTTTACTCTCTCCTCTTGGTAGCAGGAT
CTCTTTTCTCATTCCGATCAACACGATACTTCCCGACGAGAGGACTTGCC
TCGTCCAAGTGTTTTCTCTCCTAATGAATTCCCTATCTAACGTGCTCAAA
GTGAGCTTCCATCCAAAGGTTTCCATTACAATAAATGTGAATATAAAAAT
TGTGTACCGTGCCCTCATGACAGTGGGCTTGAAAGCTCAGTCGATAGAGT
CGTGTTGGCGCATAGATTCTATTCCACTTTTTTCCGTACACAAAAGATTT
AAAATACAGAGGAGAATTTTTCTGCTCTTCTcacttttccattttttctc
atttcagaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTTCAGCTGA
TGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAATCGTATTTTA
GTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGATATCGATCGA
ATCGCTTATCCGAAGGTAATCAGGTCAACATTAAtgcatttttggaccta
ccgggaggtcctttaatttgaccgttgtccgttcgtctgttacaagcttt
tctcgggattggctcattagttttttttaattttttgcacaatgatacaa
aatagtaatgcttaaaaagtgacggagcccgattttgaaaaagaaatttg
gggGAAACTTGGGCCaaaaaaactacctaaaaatcaggttttttggactt
tgtgcaaaattgcttcattagtttttcctgacttttggcagaaagatgaa
gtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaaatttt
ttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactaccta
aaaataaggttttttggacttggtgcaaaattgcttcattagtttttcct
gacttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaag
taatttttctcggaaaattttttttcgtcgtcaaatacggattttcgcaa
atttgggccaaaaactacctaaaaataaggttttttggacttggtgcaaa
attgcttcattagtttttcctgacttttggcagaaagatgaagtgcaagg
caccctaacatgtggctgaagtaatttttctcggaaaattttttttcgtc
gtcaaatacggattttcgcaaatttgggccaaaaactacctaaaaataag
gttttttggacttggtgcaaaattgcttcattagtttttcctgacttttg
gcagaaagatgaagtgcaaggcaccctaacatgtggctgaagtaattttt
ctcggaaaattttttttcgtcgtcaaatacggattttcgcaaatttgggc
caaaaactacctaaaaataaggttttttggacttggtgcaaaattgcttc
attagtttttcctgacttttggcagaaagatgaagtgcaaggcaccctaa
catgtggctgaagtaatttttctcggaaaattttttttcgtcgtcaaata
cggattttcgcaaatttgggccaaaaactacctaaaaataaggttttttg
gacttggtgcaaaattgcttcattagtttttcctgacttttggcagaaag
atgaagtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaa
atttttttttttgtcgtaaaatacgaattttcttttttgggggaaattct
gttttaccattttcctgttagcagcttttctcgggatcggcttattattt
ttttttcattttttgcacaatgatacaaaatagtaatgcctaaaaagtga
cggagcccgattttgaaaaagaaatttggggTAAACTTGGGCCaaaaaaa
ctacctaaaaataaggttttttggactttgtgcaaaattgcttcattagt
tttttctgatttttgtcagaaagatagagtgcaaggtaccttaaaatgtg
gctgaagtaatttttttcggaagattttttttcgtcataaaANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNgacgaccaagttacacaatgataaaagaaaataaatcagacgtttt
tgcattgttctaaaacttattgtgtttgctcaataccaatagtaaaatgt
agaacgcctacttttatctgattttgatcaacaggtaggtccattcagca
tgttgcttgtctTCCTAATTTTAATGCATCGTatcaatggaaaaaatttc
actctCTCAAGCTCTCTGGATATTGAATAGATCTTTCCCTTATGGAAGTT
TTTATAGCCCTGTCTTTCAGTAAGGATGAAACTACTCACATGGTACtgct
tttgaaaacttttgctTTTCTCGGCAAATGACCTTATTGTTGTAGCTTCT
ATGCAatctattgagtttaaagccctaAAGTGGCTGGAGAGAAATCTTTA
ACCtatctcaagcaagaaaaagtgaaactttaAGATTTGAGCCGCATTTA
GAATGACGAATTGAATCTagccctttctttgtttttgcgCAACCGGGcct
ttagaccatgttcacacacTACTGTTCCATTTCGCTCAGggatgattttc
gttacggatcgagggTATTcgtattggtttcggaacggaGCAGTTTCGTT
CCGAtgaaaaagtggagcgaaacctttttgatctgttttgctttgtgaCG
TCTTCTTTCTTgatgtttcgaattttgacgttcacacttgtttcggaact
gtttcgtttcggaacggaaagaaaccgtaacgtctgaacatggtcttaaa
gTCAATGATATAATCCTGTAGTATCTTTAACTTCCTTTTTTGACGATCGG
CGTGGTGTTCAATGTTAGTTTTATTATTGTTCTTCCAGGCTGGTTTTCCG
AACCCAACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGA
AGATAatagtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCAC
ctgctaaaatctcaaaagggTGAGTCCGTGATTGAAGATTAACTCAAATT
CAACACGAGAACATACCGATGTTGCAGGGGAGGATAGTGTCCTTTccttt
ttatatcaattttcaaCAACAGCCCTCCTCCTTGCATGATTTGAAACTGA
AAGATTAAAATGTCTTCCCTCTAAGCTATTAATAGAAGAAATGATATGGA
AATATTACAGAGGATTAATTGAGATGAGTGTTTCCTTTTCATTTCTACCA
GTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAACGAGTTGTAT
GTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTATGAAGTACGA
TTCGACAAACGGACAACCAACAACTGTAAGTTTATGAAAGTActtcccag
ctggtacacaacgttgactcaacgttcatctaacgttatatggacgttgt
gaacgttgtGTGCTTACAGTTgattctcgctaattcgaactcgaaaggGG
AATATTGGTTTTTTCGAATTAAGGAGAAATTCGAGTTaaagcatgattat
ttcatagaggtcgatagacctgggaaatatattactgtaaattaaGTTGA
GAAATTAAATTAAGAGGGTTTCGCCTTGACGGAAATtgggaataagttcg
aattatagaaagattcgaataagagaagttcgaataagcgagtcCAGTGT
ATTAGCCAGGGcccaaaacatttcaaattcaacGTTGAGTGATTCTGATT
TAAACGATAAGAGTTAAAAATGGAATAAATCTTTTTCAGCTTCAAGAATA
CAATACACCAGGTGGATGGATAGACGATGATGTAGGTGACATTACtaatt
catcatttttcaatCTGCTGCTTTTTTCCAGTACTAGAAATTGTTTTCTA
ACAATCTCGTTTTGCAACGGGGGAAAGTGCTTCGTATGTTTTGTATGTTC
AGGTTTCCAAGTTTCCAACTGTTTTAAAGAATAAGAAAAACAATGAACAT
CCAGAAATGTTTATCTAAGGgtcgtaattttcaaaaaagcaacaaaaatg
ttaaaaaactcTTTTGGAGAACGTCTCCGTAAGTAGCAGACTCTGCCTCT
TGTCCGGCATCCTTCAAACCTAATAAATTCCGGGTATTTTGCATTCCTTA
TTGTAAACAAACTTAAAGAGGTCAACGTGCATTCTTTCAGTACACCAAAC
CAAAGTTTGCCAAAGACAATTCCAATTATATCACGCTATTGCCACACGAA
GATTTTCGACATTTGGCTAAAGTCTCGATGAATCCCaaggtatgaactta
atttttccTTCTATCAGGAGGCTAATTAGCTAGAGGGATGCTAGCAACCT
AACCGTTAGGATTTTTAGGGTTTTAACCGTTTGATTTTTACCAGAACCTT
TTTTGACGGCCGTTAGTCACAGAGGATTGCTttacttaggcaaaaagagA
TACAGGGATAAACGAATGACCTGGGGAACCGTTTCAAATCCGTCAGACTC
GAGCATAGCTTttgaaaaacacaaattaaaaaattagcCTCTTTTAGCCT
ACCTTTTTATGAAAAACCCATCAGAAACACACCCCTTGAATCGACAAGGA
TAGTCCCTTAAGCCCCCCGTAAAGGCCGTAAAATCCGAAAGGAGAAGTTT
GTATTTCACTAGCCTATAATAATTGTTTCCGCGTTTCGTTTAGAATGGCC
CTGAAGTGGAGTTTTTGACGGATGGAAAATTCATGGTTGTGGATATCAAC
TGTTACAACGCGGATGATCAAATTTTGTAAGTTGGACTCATTTCCAAACC
ACCTTCAATATATTACTTCAAGAGAAGCATGAGAAAAATTGTAAATCATT
TTCCGCTGTctcattttttttcagatattaTCGAAGCACCCAAGAATCTC
CTGCACAACGTCATGTCTATCGAATCAATTTACAAACCAAAGAAAACAGT
TGTATCACTTGTGACTTGTTGAAAGGTAAGACATGCAACTTTACAGAACT
CTTCTAACTGGTGGAACAACTTTAACACGGAGGGCTTAAAATGCTTAATA
CATTCGCTTAAACTTCTAGACTGATTCCCTGACCTCTAAGGATAAATTCC
TAAATAGAAATTATAACCGTGAAGTTTTTTCGTTAGAGAATGGATAAACT
AATTTTTAGCTCAAATAGTTGGATAGAGTGTCGTCCAACAGCCTTCTTAT
TTCTGCcgagaaaatttgaagaatacTGAAAGCAGAACAGAAAGCTCAAC
CCACTTTTCGTACTTTTGGTTAATTTTTTGAGCTTTGTGAGTTATGATAA
CGCGCTTAACATGTCTATGTGAAAATTAGGTTGTTAGGTTATACAAGTTC
ATCTGTGCATTCATTGAGCAGagtcttttagtgagttaaagcATGGTGTT
TGTTTTTCCTTTCTGGTAGTTTACATATCTCGTTTGCAGGCTTGATTACT
TCCGCGATGAAGAATAAATGTTTCACCATTTCTGGTCTGTATTACAAAGG
GACGAGATTTCTGGATTTCTAATATATTTCTATTGCATTATTGTAGACAG
TGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCAAGAAGTGTA
CGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTATCTTACATG
GTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAATGAACATGT
TAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAATTTTATACTA
TAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGCCCTGCGGGA
TTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTATGGTGGTCC
AAGCACGCAAAAggtaaaagaaattttctttggaaGTTATTCCCTTTAGG
TGTTGATTGGCTTAATAATTATATGGAGAAGTAGAAAATCCCTTTGAAGC
TATTTCCTTACAGGGATGCTAGAAAGCCTGTAAAGTATACAGAAAAATAC
ATTTTGGCTTTCGGAAAGAAAATTAACCTCACGGTCTGTAAAACAAATGG
TTCTCTACCAGCCAGTCGGTCTGATGACAATAGCttgaaaaatttagcaa
aaaaaaatttagcctTTTCTTATTCAAAAAGTTCTCAATACACGTCTTGA
AGGTTGTACTGTAAATGCAAGGTGTTTCTGATGGACTGATTCTTTACAAT
CCTCGCAGGTGACAGATCGGTACAGTTACGGATTCGATCACTTTTTGGTA
TCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGAGGAGCTGGTTA
CTATGGTTACAAGTATGTTCGTTTAACATTAGCGAGGTTAATTTTGACtg
taaagtgcgataccgtaggcctgtatataacttgccaaagcaaatcatac
aagtgaaatcttatgtaaAGGCCTACGATATCTCATTGAAAGGTCTAAAT
AAAAACTACTCAATTCTGAAAGGAAATAACTGTTTCACGCTGAAATATTG
TGGTAGCATGACATGCATGTCgtttattttcattcagtttattcaaaaca
atctcAGTACTACAGTTAAGCAAATAAAGACTAAAGTCAGACTAGATCCC
GATTCCATATTCCTCCTTCTATTGGTATAAGTCGTACCAGCGTactttac
aaatttgaaatctATTTTCGATTTATAATTGGATGCTCTGACGTTTTTCC
CGGACAATTCAACTTTACGCTCCCTTTTCAGTAGAAGTTTTCCTGAGCTA
AATTTAATGTGTAAAAGTTTACTTTCTGTTCCTTTCTTTAGGTTTATGTA
CGCAGTCTACAAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACG
TTGGCAAGTAAGTCCACTTGTGCTTGTATATCGTTGCTTGGGGCTCGAAA
AAAGATCCCGATCATTTATCTATTGGAACTTTAGTAAAGCAGGGTTACTA
AAACCCAAGTATTTGATCATTGACACGGGCAATTATTCATGAAGAAATAG
ATAAAAATCAGCTTCCATTCGATGTTAAGTTTGGAGATGTATACCCAGCA
TTCTATTTTTTGCGTGTCCCTGAATTTTATACATGACAGTCCACAAATCT
CAGAATTTTAGTTCTCACTTTTGTAACAAAATAAAGGTTAAGGCCACTGG
ACTTTCATATTTCATTTATTCACTTTCCAGGTACTTAAAAACACAACCTT
ACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGGTGAGTAAAAATGTG
CTTGTTAATCCTACTGGCATCAAACATTAAAGAACGGTCATCTCAGGTCC
atcgaaaatatcaaaaaacgtTCTTCTAACATCAGCAAACCCGAACTAAC
GTTGAAACACAATCTCGTTCCCTGTGCCATCAGTAAGCaccaaaaagctg
ataatacactAGCGTCAaccagtaacgtaaataaagcctgggatgcacgg
ggacgaggttggccGAAACACTGTTATGAAACAAGTTTatagaaaagtga
aaaagttttcaatctTGATAATATTTCTTTTGTTCATTTCAGTCGTATGG
AGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGACGTCATCACGA
CGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTATGGTAATTCT
TATTTCATTATTATGATAACGCTACTGTAGCAACCAATTTTACGATGTTT
TTTGGTCGAAAGAGTAAGATTTCTTTAGATTACAGATTCTTTCGTTTGAT
GCGACTTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCCGATTTcctc
aattcaaaatttcctctACTGACCTTACATACCTTAAATTTCCGGGAAAT
TGTATATTGATGACCTAACGAAAACTTCCTATCCAGTGGTGATTTACCTC
ATCTTTCATAAGTACGAGCTTTCAAAATATGctcacacttttttgaaaaa
taacctttTTTGGCCTTATATAGTGATCATGACCTATTGACAAATGGCCG
GTTTGAATAAATGTTTGACGCGCATGATCCATTAACAATCAATCCCAGGA
TCTTATACTTTTGTTTCTACTTTAGATACTGTTTACACTGAAAGATATAT
GGGACTGCCTACACCAGAAGATAATATTGCTGGGTATCAGGTTAGTAGAG
TGGCTCAGTCCGGAAGAAGCCATATAATCCTATTAACTTTCGTCTATAAA
ACCGAACTGACCAAACTAAATCTAAAGGTGATGTCTAAGTTTTCTTGAGT
GGAGTTTAACTCTTGCATGATTAGAATAACCGTCGTAATATTACGTATTT
TCGAATCTATGATAACAGGAACATTGATATCTTGATTTTTACTAGAGTAC
GAGTGTCTTGAGCATGACAAAGAACTTCAGAGGGAAGAACTTTCTACTGA
TACATGGCACAGCAGATGGTGAGAAACCATTTCATTGTATAGTGCTAATT
AGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCAAT
CACACCAAAATAATCCAATGACGATCTtgtatcgttttttttttcatcaa
aaatctCTTACATCAAATTTCTTGTCCATTGAACTACTTTTAATTCAAAA
CTTTTATGCACttctaaattttctttcgtAGATAACGTCCACTTTCAAAA
CGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGAG
GACAGGTGTGTTTCACTTTTGCCAGCATCGACTGGTATTTTTAATGGTTA
TTTCAATTGTTAATTTGCGATCTTTTCTCTTATGGAGTTAAATTTagacc
aaaaaaattgaaatgaaaattttaattctccTACATAGAGGTTACTAGCT
TTATCATTTCCTTTTTGGTTTTTGGTGAGTTGACTATTTTATAAGAAGCT
TTTCAATGTTCATCATTTTCAGTTTTACACGGACAAGAGACATTCAATAC
AAACGAGTNGCAACCAATTTTACGATGTTTTTTGGTATTTAGTGCTACCT
TGGACTCTGATAGAGTTCAATCCTCCCAGCTtagaaaaacataaaataag
caaatttctttttcgtatagtctatttgatttgatttttttttttaacaa
agttaATCTTTGGACGATTTTTTGTTAGTCGTTTACCGTCTAGTGGTAGC
TTTATTACCAATCATTTGTTACTCAATTTTATCGTGAAAGATTAACGGAC
AGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCGT
AGGCCTCCGATTTcctcaattcaaaatttcctctACTGACCTTACATACC
TTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAAAGCTTGCTAAC
CAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGct
cacacttttttgaaaaataacctttTTTGGCCTTATATAGTGATCATGAC
CTATTGACAATAATAGCCGGTAAATGGGCGTTTTTCTTCGAGTAAATGTT
TGACGCACATGACCCATTTACAATCAATCCCAGGATCTTATACCTTCGTT
TCTACTTTAGATACTGTTTACACCGAAAGATATATGGGACTGCCTACACT
TGAAGATAATATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGTCCGGAT
GAAGCCATACAATCCTATTACCTTTCGTCTATAAAACCGAACTGACCAAA
CTAAATCTAAAGGTGGTGTCTAAGTTTTCTTGAGTGGAGTTTAACCCTCG
CATGATTAGAATAACCGTCGTAATATTACGTATTTTCGAATCTATGATAA
CAGGAACATTGATATCTTGATCTTTACTAGAGTACAAGTGTCTTGAGCAT
GACAAAGAACTTCAGAGGAAAGAACTTTCTACTGATACATGGTACAGCAG
ATGGTGAGAAAGCGTTTCATTGTATAGTATACTTAGTTTCATACTCGTTT
ACAGGCCTCCCAGAGAAGTCACTGATTACGCAATCACACCAAAATAATCC
AATCACGATCCTGTACCgttttttataaataagaaatgaattaaaattaa
atcaaaaatcttgTACATCAAATTTCTTGTACATTGAACTACTTTTGTGA
ACATTGAACACGTCGCTCCCCTCGTATACTACGAACTAGTGTAATAGCAA
CGAATCGATAGCGcagttgggagagcaatcgcccggcaagcgagaggtcg
tgggttcaatccccactcgatttgttacctttgagaaaactgggaagtac
attagtgcatgatccgttgattcattactgAACTACTTTTAATTCAAAAC
TTTTATGTACTTCTAAATTTTCCTTCGTAGATAACGTCCACTTTCAAAAT
GCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGAGG
ACAGGTGTGATTCACTTTTGCCAGCATCGACTGGTATTTTTAATGGTTAT
TTTAATTGTTAATTTGCGATCTTCTCTCTTATGGAGTTAAATTTAgacca
aaaaatttgaaatgaaaattttaattctccTACATAGAGGTTACTAACTT
TATCATTTCCTTTTTGGTTTTCGGTGAGTTGACTATTTTATAAGAAGCTT
TTCAATCTTCATCATTTTCAGTTTTACACGGACAAGAGACATTCAATACA
AACGAGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGA
GAAATGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCA
CTCAAATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTC
AAATTAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGT
GGTGGACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGA
CATCTAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTA
TCATACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACT
TAATTAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGA
CTGCAAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAA
CCAACGAATGTTGTTTTTCGaaggttaaattttgattttcttataaaata
atgtAATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACG
AAAAAAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTA
CGTTATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATT
GCAAAATGTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTG
GTGTTCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGT
GACAAGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGA
GGGGTAAATTACTCAGAAAacatgattttttaaaaagaataaaagaatcG
TACCAAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGT
TTTGGCACGTacgtagacgatgctatcgtccgtttagagggtcagtaaac
gTGAGAAAGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtg
gcggtagagttttggaacaatgTTAGACAATAATTTTTACACTGTAAACA
CCTCTGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTAT
CCCGCTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgatagg
atcgtcagCACGTACTTTGTGACATTATCTtgtataattttgatttttta
attttgtttaataattgtttattatttactatgtgtaaaagaaaattata
ttGTGTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATG
AAAGAAATTATCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:308940..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.241051	0.177489	0	0	0.397621	0.196715	0.0812497	1.36204	2.39548	2.26535	1.00853	2.35001	8.83083	5.40105	1.23983	0.850639	1.82158	3.14853	1.49398	4.19697	2.78304	3.44503	2.42422	2.59581	6.92406	7.47851	13.5942	6.64412	1.25921	0.0553395

Blast

[Close]

BLAST of TCONS_00060381 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 1.033e-120
Identity = 251/775 (32.39%), Postives = 423/775 (54.58%), Query Frame = 3

Query:   18 ITLVLVFTLALKKDKELSSETLISPNRRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2267
            +T++ V  + L K  +   +      + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   18 VTIITVPVVLLNKGTD---DATADSRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060381 vs. Swiss-Prot (Human)

BLAST of TCONS_00060381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	1.033e-120	32.39	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

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TCONS_00060381 (transcript) - C. hemisphaerica