TCONS_00060380 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060380
Unique Name	TCONS_00060380
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3562

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:308935..325216+

transcript sequence

>TCONS_00060380 ID=TCONS_00060380|Name=TCONS_00060380|organism=Clytia hemisphaerica|type=transcript|length=3562bp
TGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAG
CCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGATCAGTCCAAAC
AGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCAC
TGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGATTTTTCGGACG
GCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTGATCGGATTCTC
ACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCACTAGCCAGACT
TTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATACTAAAAAGCTAT
ATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGAGATCTACAAAT
AGagtaATCAAACTACATAGCCCGGACGGAGATTCGGATGAGCAGATACG
ACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTTCGTCTACAAAT
GCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACATCAAGTATTAC
CAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGCGTTCCTGA
TTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTT
CAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAATCG
TATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGATAT
CGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCCAACCAtcgaaa
tcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATAatagtgtcaaa
aatttcacCCAATATAAAAAGATCCTAAGTCCACctgctaaaatctcaaa
aggTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAACGAGTTGT
ATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTATGAAGTAC
GATTCGACAAACGGACAACCAACAACTCTTCAAGAATACAATACACCAGG
TGGATGGATAGACGATGATTACACCAAACCAAAGTTTGCCAAAGACAATT
CCAATTATATCACGCTATTGCCACACGAAGATTTTCGACATTTGGCTAAA
GTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTTTTGACGGATGG
AAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGATGATCAAATTT
TatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTCATGTCTATCGA
ATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGTGACTTGTTGAA
AGACAGTGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCAAGA
AGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTATCT
TACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAATGA
ACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAATTTT
ATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGCCCT
GCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTATGG
TGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTACGGATTCGATC
ACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGA
GGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTCTACAAACAACT
TGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTACTTAAAAA
CACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGTCGTAT
GGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGACGTCATCAC
GACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTATGATACTG
TTTACACTGAAAGATATATGGGACTGCCTACACCAGAAGATAATATTGCT
GGGTATCAGAGTACAAGTGTCTTGAGCATGACAAAGAACTTCAGAGGAAA
GAACTTTCTACTGATACATGGTACAGCAGATGATAACGTCCACTTTCAAA
ATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGA
GGACAGTTTTACACGGACAAGAGACATTCAATACAAACGAGCCATGTTTA
TTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAATGTTGAAATCC
CCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCAAATGAAGAAGA
AGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAATTAAGAACTTAA
AAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGACAATGGAAA
GTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATCTAAAGATAAAG
AGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCATACTGAATGCAG
AATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAATTAAGAAAGAGG
ACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGCAAATCTGCAAA
TTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAACGAATGTTGTT
TTTCGaaggttaaattttgattttcttataaaataatgtAATCGAGATCA
AGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAAAAAGAAAGTGA
TATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTTATATACACATT
TTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAAAATGTGAAACT
TTaaggaaagtttatttttgagTTAAGTACTTCTGGTGTTCTCAAACAAA
GTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGTCATGTTCA
TAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAAATTACTCA
GAAAacatgattttttaaaaagaataaaagaatcGTACCAAACCTTTGTG
ATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCACGTacgta
gacgatgctatcgtccgtttagagggtcagtaaacgTGAGAAAGTACAGA
GTCAGGAcatcagggcggtttacggggaaaaagtggcggtagagttttgg
aacaatgTTAGACAATAATTTTTACACTGTAAACACCTCTGCCACTGTTT
ACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCGCTTCCTGGATT
ATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcgtcagCACGTAC
TTTGTGACATTATCTtgtataattttgattttttaattttgtttaataat
tgtttattatttactatgtgtaaaagaaaattatattGTGTAAATTGAAT
TTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAGAAATTATCGTC
Actaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:308935..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060380 ID=TCONS_00060380|Name=TCONS_00060380|organism=Clytia hemisphaerica|type=transcript|length=16282bp|location=Sequence derived from alignment at scaffold_341:308935..325216+ (Clytia hemisphaerica)
TGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAG
CCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTCTGCAATTT
ATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTC
GTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGA
TCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGAT
TCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAG
ACAGTAAGTATTTTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCA
TTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTC
ACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTCT
GCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAAT
CACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTATT
TTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTTGTCC
TCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCTC
AAAAAAGACAGTAAGTATTTTCTGGATCAGTCTGGTCTGCAATTTATACT
ACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCT
CGTCTTCATACTAGCACTCAAAAAAGACATTAAGTATTTTACTGACCAGT
ATGGTCTGTAATTTATACTTCATGTAGTTCCCGGACCAACATAATTGTTC
TTGTCCTTTTGATCTTATTTAATCAACCTCATCCTTGTTGCTTCAAATTA
GCTCTAAACAGaaagtaaatattttaatgagtagtctggtctgtaattta
taGTTTATCTTATTCCAAGACCAACATCATTATTCtagtcatttttgttt
ttatctcaATCACCCTCGTCCTCGTTTTAATACTAGCTCTCAAAAAAGAC
AGAAAATCTTTTACGGGCCAATctgtcaaaacaaacaaaagagaTTCCAA
CAAATCAACCTCGTACCCAGAGTCCATTgaaccactttttgattttactc
atGAACGTGTTCGTTCAACTGTGAGAGCTATCATCGTAATCATAAAGTGA
ACAAAGGGAATGGGTTCGAGTTTGTCTAATAAACAAAACTctaattctca
aattttcagaagaattGAGTTCGGAAACGTTGATCAGTCCAAACAGACGA
TTTACATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCACTGCAAG
CATTTATTGGGTGTCAGGTAAGATAATAATCTAAGTCCTGGAAATTCTAC
CTATGATAATAATTATTAGGACAATCGCTCCATGGACAATCttatattgt
aattttttttcataagatgGAGAGGTGATAAcactaaaaagttaaaatat
ttattttctctgtctttggaaatattttatgaaagGAGCTGCTTCAGATA
ACAAAATTCCGGAGTAGTTTCCCGGGCGAAGACAGTCAATCGGGATGACG
ATCCTTATTATCTGGGAAAATGATTTGACtcattttggctttttttaaat
atcaacTGCAACAGCTAAACAATCTTAATTTCAAAATCCTTTCTTTCAGA
TGACAATTACTTAGATTTTTCGGACGGCATTGTCCGAAAATCGATCACCA
ATTCAACTTACTCTGATCGGATTCTCACACGACAAGAAATGGTAAGTTAA
CTTCTTAAGGTCGGAATCCTGATAGAGATTGAGATTTGAAAACTAGTCGA
AGTCTCTCGGTTTACGCTACCATCTTAAATGAATTGATATGCACTCCTTG
AAAGGAGCACAAAAAAAATGGCCTTggtttttaacatattttttctGTGG
AGATTGTTGGAGCATTAAGTAGAAAAGATGAAGGGCCCGAGTCAAATTTC
GAAAACCTACACTGAATTTAGGCTTTTCGACATGTTTTCATAGCTATATT
TCAATAAATCTTCAACAACATTTTCACTATTATTGTTAAATTGTTAAATT
CAGTTGTGGACAGTAAATGTGAAAGCAATTAAAAGAACAATCTTCACATT
GTTTCAAATCAtcttattttatgttttagGTTGACAATAGAATCAGTCGT
TCACTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAA
TACTAAAAAGGTGAGTGAGGACTTCAATCCCATTATTTGGACTCGAGATA
TTTATACCCATCACGTGACTCAATGAGCTACAGGCTACCCTGAAGGAATG
ACAGACACCCCGAAAAGAATTCGGTTTTTCTTCTAGAacaaagaaatgaa
atgaaactcGTTTTCGGAGCAAGTCAGCATCATTTTTATGGCGTTTATGT
AATGACTTATAATTGATTGCCTTCTTTACAGCTATATCGACATTCCTTCT
ACGCTGACTATTATGTAAAAGAGAGATCTACAAATAGgtaatattatttt
gttttcacaaaAACAAGTTATTAGTTAAATACACGATTAATCAAAAGGTC
ATCCTTTCATTTAAGCATGGGCTTAACTCGGTTGTTcggttgaaactttt
tttttcttttttagagtaATCAAACTACATAGCCCGGACGGAGATTCGGA
TGAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTAA
GAATGTGTTATTTATTTTAATTCCAATCTCTCATCATTAAGCATTGTATT
ATAGTCTCTGTAGTATCTTTATTAACAGTTACATTTGTCCCTTATTTATA
AATGCACTCCAGCATTATAGCAAAGCTTAAATCAAACTTATATGGTACTC
GATGTTTTTTTTCCGACACGCTGAAGgtcggaaaaacttttcatATCTGG
ATATTTTGCCTGGTCATGCAACAGAATTGTTATTTGGAAGTCTTAGCCCT
TGTTTTGGGGATCGTTGAGTCCAACCGCAATTTTCCGACCTTAACACGGG
CAGTTGAATTACCCTCCCCCACCGTTTGGCACACTCCTTCAGCTTCTGTT
TGGATGGCTACTAATACACCATTGGAGTATCAGATGTATTTGGAATTTGA
ATTCAACGAATGTAGTGAGCCCCATTGCAAGCACAAGCTGCAGTGAAATA
CTGCGACgtaaaattttacaattttaaaattcaaagtcGTTAGGTTAGAT
AGTTAAAGCGTCCCCTCCTGAACATATAAGCTTTGTCTTCGCAGGTTTTC
GTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACAT
CAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAATG
GCGTTCCTGATTGGGTTTACGAAGGTAAATAAAGGTTACcgtattatttt
ttattaaaagattTAGTCGGCTTCAGAAAGACGAAATTACGTTAGGTTTC
TTTTATCAAGATCCCGAGTCTCCTTGCATGGGTAGATTTTAACTATTTTG
TCTACAGCCTGtccagaaaaaaagttgaacatatTGATGaagtaaaatct
ttaaaactcattttttcattctataataaattgctcaaaaaaataaattt
tgctcTGTTGGCACAATTTTGTAAGTCCGTGACAGTGATATCGTTGAATA
CCGAAACGCGCATGTGTCGTTGGTATCCTTTGGGATGGTGATTTTATTCA
TCCTACGCTACACGTGGTTTCTGGAGTGATCGAGACCCGACGCTGTTCCC
GAGTGGGCTTCCAGTGTGGCGTTATGGAGCGCCAAACCAGTTAAGGCTGG
GTCCATGTCAACATATTTATTTAAGTTTTACCCCGAATATCGGCCTGGCT
GACGTCAGAGAGGAGAGACAATGACTAAAGTTAATTTCGATCAATATCTC
ATAAATCCAATATGTTAGACATGTCGAGAAGTCGGGAACGAactattagc
gagtttatgtatttgcgcttttgaggacggtaaagtgactgaagtgattt
ggaataacccgtaATTCTGCCCCGCAAAATCATGGACGATAatagtgctg
atttaccgtcgtcctcagttggtcatgatctagtcaaattagaaccttac
cgtctccgtcgctgaaaaacacacatacataaactcggtatcgACTCTGC
CTGGCCGGTGCCATTTCCGAACGAACTCTTTACTCTCTCCTCTTGGTAGC
AGGATCTCTTTTCTCATTCCGATCAACACGATACTTCCCGACGAGAGGAC
TTGCCTCGTCCAAGTGTTTTCTCTCCTAATGAATTCCCTATCTAACGTGC
TCAAAGTGAGCTTCCATCCAAAGGTTTCCATTACAATAAATGTGAATATA
AAAATTGTGTACCGTGCCCTCATGACAGTGGGCTTGAAAGCTCAGTCGAT
AGAGTCGTGTTGGCGCATAGATTCTATTCCACTTTTTTCCGTACACAAAA
GATTTAAAATACAGAGGAGAATTTTTCTGCTCTTCTcacttttccatttt
ttctcatttcagaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTTCA
GCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAATCGTA
TTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGATATCG
ATCGAATCGCTTATCCGAAGGTAATCAGGTCAACATTAAtgcatttttgg
acctaccgggaggtcctttaatttgaccgttgtccgttcgtctgttacaa
gcttttctcgggattggctcattagttttttttaattttttgcacaatga
tacaaaatagtaatgcttaaaaagtgacggagcccgattttgaaaaagaa
atttggggGAAACTTGGGCCaaaaaaactacctaaaaatcaggttttttg
gactttgtgcaaaattgcttcattagtttttcctgacttttggcagaaag
atgaagtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaa
attttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaact
acctaaaaataaggttttttggacttggtgcaaaattgcttcattagttt
ttcctgacttttggcagaaagatgaagtgcaaggcaccctaacatgtggc
tgaagtaatttttctcggaaaattttttttcgtcgtcaaatacggatttt
cgcaaatttgggccaaaaactacctaaaaataaggttttttggacttggt
gcaaaattgcttcattagtttttcctgacttttggcagaaagatgaagtg
caaggcaccctaacatgtggctgaagtaatttttctcggaaaattttttt
tcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacctaaaa
ataaggttttttggacttggtgcaaaattgcttcattagtttttcctgac
ttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaagtaa
tttttctcggaaaattttttttcgtcgtcaaatacggattttcgcaaatt
tgggccaaaaactacctaaaaataaggttttttggacttggtgcaaaatt
gcttcattagtttttcctgacttttggcagaaagatgaagtgcaaggcac
cctaacatgtggctgaagtaatttttctcggaaaattttttttcgtcgtc
aaatacggattttcgcaaatttgggccaaaaactacctaaaaataaggtt
ttttggacttggtgcaaaattgcttcattagtttttcctgacttttggca
gaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttctc
ggaaaatttttttttttgtcgtaaaatacgaattttcttttttgggggaa
attctgttttaccattttcctgttagcagcttttctcgggatcggcttat
tatttttttttcattttttgcacaatgatacaaaatagtaatgcctaaaa
agtgacggagcccgattttgaaaaagaaatttggggTAAACTTGGGCCaa
aaaaactacctaaaaataaggttttttggactttgtgcaaaattgcttca
ttagttttttctgatttttgtcagaaagatagagtgcaaggtaccttaaa
atgtggctgaagtaatttttttcggaagattttttttcgtcataaaANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgacgaccaagttacacaatgataaaagaaaataaatcagac
gtttttgcattgttctaaaacttattgtgtttgctcaataccaatagtaa
aatgtagaacgcctacttttatctgattttgatcaacaggtaggtccatt
cagcatgttgcttgtctTCCTAATTTTAATGCATCGTatcaatggaaaaa
atttcactctCTCAAGCTCTCTGGATATTGAATAGATCTTTCCCTTATGG
AAGTTTTTATAGCCCTGTCTTTCAGTAAGGATGAAACTACTCACATGGTA
CtgcttttgaaaacttttgctTTTCTCGGCAAATGACCTTATTGTTGTAG
CTTCTATGCAatctattgagtttaaagccctaAAGTGGCTGGAGAGAAAT
CTTTAACCtatctcaagcaagaaaaagtgaaactttaAGATTTGAGCCGC
ATTTAGAATGACGAATTGAATCTagccctttctttgtttttgcgCAACCG
GGcctttagaccatgttcacacacTACTGTTCCATTTCGCTCAGggatga
ttttcgttacggatcgagggTATTcgtattggtttcggaacggaGCAGTT
TCGTTCCGAtgaaaaagtggagcgaaacctttttgatctgttttgctttg
tgaCGTCTTCTTTCTTgatgtttcgaattttgacgttcacacttgtttcg
gaactgtttcgtttcggaacggaaagaaaccgtaacgtctgaacatggtc
ttaaagTCAATGATATAATCCTGTAGTATCTTTAACTTCCTTTTTTGACG
ATCGGCGTGGTGTTCAATGTTAGTTTTATTATTGTTCTTCCAGGCTGGTT
TTCCGAACCCAACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTG
CAAGAAGATAatagtgtcaaaaatttcacCCAATATAAAAAGATCCTAAG
TCCACctgctaaaatctcaaaagggTGAGTCCGTGATTGAAGATTAACTC
AAATTCAACACGAGAACATACCGATGTTGCAGGGGAGGATAGTGTCCTTT
cctttttatatcaattttcaaCAACAGCCCTCCTCCTTGCATGATTTGAA
ACTGAAAGATTAAAATGTCTTCCCTCTAAGCTATTAATAGAAGAAATGAT
ATGGAAATATTACAGAGGATTAATTGAGATGAGTGTTTCCTTTTCATTTC
TACCAGTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAACGAGT
TGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTATGAAG
TACGATTCGACAAACGGACAACCAACAACTGTAAGTTTATGAAAGTActt
cccagctggtacacaacgttgactcaacgttcatctaacgttatatggac
gttgtgaacgttgtGTGCTTACAGTTgattctcgctaattcgaactcgaa
aggGGAATATTGGTTTTTTCGAATTAAGGAGAAATTCGAGTTaaagcatg
attatttcatagaggtcgatagacctgggaaatatattactgtaaattaa
GTTGAGAAATTAAATTAAGAGGGTTTCGCCTTGACGGAAATtgggaataa
gttcgaattatagaaagattcgaataagagaagttcgaataagcgagtcC
AGTGTATTAGCCAGGGcccaaaacatttcaaattcaacGTTGAGTGATTC
TGATTTAAACGATAAGAGTTAAAAATGGAATAAATCTTTTTCAGCTTCAA
GAATACAATACACCAGGTGGATGGATAGACGATGATGTAGGTGACATTAC
taattcatcatttttcaatCTGCTGCTTTTTTCCAGTACTAGAAATTGTT
TTCTAACAATCTCGTTTTGCAACGGGGGAAAGTGCTTCGTATGTTTTGTA
TGTTCAGGTTTCCAAGTTTCCAACTGTTTTAAAGAATAAGAAAAACAATG
AACATCCAGAAATGTTTATCTAAGGgtcgtaattttcaaaaaagcaacaa
aaatgttaaaaaactcTTTTGGAGAACGTCTCCGTAAGTAGCAGACTCTG
CCTCTTGTCCGGCATCCTTCAAACCTAATAAATTCCGGGTATTTTGCATT
CCTTATTGTAAACAAACTTAAAGAGGTCAACGTGCATTCTTTCAGTACAC
CAAACCAAAGTTTGCCAAAGACAATTCCAATTATATCACGCTATTGCCAC
ACGAAGATTTTCGACATTTGGCTAAAGTCTCGATGAATCCCaaggtatga
acttaatttttccTTCTATCAGGAGGCTAATTAGCTAGAGGGATGCTAGC
AACCTAACCGTTAGGATTTTTAGGGTTTTAACCGTTTGATTTTTACCAGA
ACCTTTTTTGACGGCCGTTAGTCACAGAGGATTGCTttacttaggcaaaa
agagATACAGGGATAAACGAATGACCTGGGGAACCGTTTCAAATCCGTCA
GACTCGAGCATAGCTTttgaaaaacacaaattaaaaaattagcCTCTTTT
AGCCTACCTTTTTATGAAAAACCCATCAGAAACACACCCCTTGAATCGAC
AAGGATAGTCCCTTAAGCCCCCCGTAAAGGCCGTAAAATCCGAAAGGAGA
AGTTTGTATTTCACTAGCCTATAATAATTGTTTCCGCGTTTCGTTTAGAA
TGGCCCTGAAGTGGAGTTTTTGACGGATGGAAAATTCATGGTTGTGGATA
TCAACTGTTACAACGCGGATGATCAAATTTTGTAAGTTGGACTCATTTCC
AAACCACCTTCAATATATTACTTCAAGAGAAGCATGAGAAAAATTGTAAA
TCATTTTCCGCTGTctcattttttttcagatattaTCGAAGCACCCAAGA
ATCTCCTGCACAACGTCATGTCTATCGAATCAATTTACAAACCAAAGAAA
ACAGTTGTATCACTTGTGACTTGTTGAAAGGTAAGACATGCAACTTTACA
GAACTCTTCTAACTGGTGGAACAACTTTAACACGGAGGGCTTAAAATGCT
TAATACATTCGCTTAAACTTCTAGACTGATTCCCTGACCTCTAAGGATAA
ATTCCTAAATAGAAATTATAACCGTGAAGTTTTTTCGTTAGAGAATGGAT
AAACTAATTTTTAGCTCAAATAGTTGGATAGAGTGTCGTCCAACAGCCTT
CTTATTTCTGCcgagaaaatttgaagaatacTGAAAGCAGAACAGAAAGC
TCAACCCACTTTTCGTACTTTTGGTTAATTTTTTGAGCTTTGTGAGTTAT
GATAACGCGCTTAACATGTCTATGTGAAAATTAGGTTGTTAGGTTATACA
AGTTCATCTGTGCATTCATTGAGCAGagtcttttagtgagttaaagcATG
GTGTTTGTTTTTCCTTTCTGGTAGTTTACATATCTCGTTTGCAGGCTTGA
TTACTTCCGCGATGAAGAATAAATGTTTCACCATTTCTGGTCTGTATTAC
AAAGGGACGAGATTTCTGGATTTCTAATATATTTCTATTGCATTATTGTA
GACAGTGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCAAGAA
GTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTATCTT
ACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAATGAA
CATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAATTTTA
TACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGCCCTG
CGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTATGGT
GGTCCAAGCACGCAAAAggtaaaagaaattttctttggaaGTTATTCCCT
TTAGGTGTTGATTGGCTTAATAATTATATGGAGAAGTAGAAAATCCCTTT
GAAGCTATTTCCTTACAGGGATGCTAGAAAGCCTGTAAAGTATACAGAAA
AATACATTTTGGCTTTCGGAAAGAAAATTAACCTCACGGTCTGTAAAACA
AATGGTTCTCTACCAGCCAGTCGGTCTGATGACAATAGCttgaaaaattt
agcaaaaaaaaatttagcctTTTCTTATTCAAAAAGTTCTCAATACACGT
CTTGAAGGTTGTACTGTAAATGCAAGGTGTTTCTGATGGACTGATTCTTT
ACAATCCTCGCAGGTGACAGATCGGTACAGTTACGGATTCGATCACTTTT
TGGTATCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGAGGAGCT
GGTTACTATGGTTACAAGTATGTTCGTTTAACATTAGCGAGGTTAATTTT
GACtgtaaagtgcgataccgtaggcctgtatataacttgccaaagcaaat
catacaagtgaaatcttatgtaaAGGCCTACGATATCTCATTGAAAGGTC
TAAATAAAAACTACTCAATTCTGAAAGGAAATAACTGTTTCACGCTGAAA
TATTGTGGTAGCATGACATGCATGTCgtttattttcattcagtttattca
aaacaatctcAGTACTACAGTTAAGCAAATAAAGACTAAAGTCAGACTAG
ATCCCGATTCCATATTCCTCCTTCTATTGGTATAAGTCGTACCAGCGTac
tttacaaatttgaaatctATTTTCGATTTATAATTGGATGCTCTGACGTT
TTTCCCGGACAATTCAACTTTACGCTCCCTTTTCAGTAGAAGTTTTCCTG
AGCTAAATTTAATGTGTAAAAGTTTACTTTCTGTTCCTTTCTTTAGGTTT
ATGTACGCAGTCTACAAACAACTTGGTCATTATGAAGCCGTCGATGCCGT
TAACGTTGGCAAGTAAGTCCACTTGTGCTTGTATATCGTTGCTTGGGGCT
CGAAAAAAGATCCCGATCATTTATCTATTGGAACTTTAGTAAAGCAGGGT
TACTAAAACCCAAGTATTTGATCATTGACACGGGCAATTATTCATGAAGA
AATAGATAAAAATCAGCTTCCATTCGATGTTAAGTTTGGAGATGTATACC
CAGCATTCTATTTTTTGCGTGTCCCTGAATTTTATACATGACAGTCCACA
AATCTCAGAATTTTAGTTCTCACTTTTGTAACAAAATAAAGGTTAAGGCC
ACTGGACTTTCATATTTCATTTATTCACTTTCCAGGTACTTAAAAACACA
ACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGGTGAGTAAAA
ATGTGCTTGTTAATCCTACTGGCATCAAACATTAAAGAACGGTCATCTCA
GGTCCatcgaaaatatcaaaaaacgtTCTTCTAACATCAGCAAACCCGAA
CTAACGTTGAAACACAATCTCGTTCCCTGTGCCATCAGTAAGCaccaaaa
agctgataatacactAGCGTCAaccagtaacgtaaataaagcctgggatg
cacggggacgaggttggccGAAACACTGTTATGAAACAAGTTTatagaaa
agtgaaaaagttttcaatctTGATAATATTTCTTTTGTTCATTTCAGTCG
TATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGACGTCAT
CACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTATGGTA
ATTCTTATTTCATTATTATGATAACGCTACTGTAGCAACCAATTTTACGA
TGTTTTTTGGTCGAAAGAGTAAGATTTCTTTAGATTACAGATTCTTTCGT
TTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCCGATT
TcctcaattcaaaatttcctctACTGACCTTACATACCTTAAATTTCCGG
GAAATTGTATATTGATGACCTAACGAAAACTTCCTATCCAGTGGTGATTT
ACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGctcacacttttttg
aaaaataacctttTTTGGCCTTATATAGTGATCATGACCTATTGACAAAT
GGCCGGTTTGAATAAATGTTTGACGCGCATGATCCATTAACAATCAATCC
CAGGATCTTATACTTTTGTTTCTACTTTAGATACTGTTTACACTGAAAGA
TATATGGGACTGCCTACACCAGAAGATAATATTGCTGGGTATCAGGTTAG
TAGAGTGGCTCAGTCCGGAAGAAGCCATATAATCCTATTAACTTTCGTCT
ATAAAACCGAACTGACCAAACTAAATCTAAAGGTGATGTCTAAGTTTTCT
TGAGTGGAGTTTAACTCTTGCATGATTAGAATAACCGTCGTAATATTACG
TATTTTCGAATCTATGATAACAGGAACATTGATATCTTGATTTTTACTAG
AGTACGAGTGTCTTGAGCATGACAAAGAACTTCAGAGGGAAGAACTTTCT
ACTGATACATGGCACAGCAGATGGTGAGAAACCATTTCATTGTATAGTGC
TAATTAGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCACTGATTAC
GCAATCACACCAAAATAATCCAATGACGATCTtgtatcgttttttttttc
atcaaaaatctCTTACATCAAATTTCTTGTCCATTGAACTACTTTTAATT
CAAAACTTTTATGCACttctaaattttctttcgtAGATAACGTCCACTTT
CAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATT
TCGAGGACAGGTGTGTTTCACTTTTGCCAGCATCGACTGGTATTTTTAAT
GGTTATTTCAATTGTTAATTTGCGATCTTTTCTCTTATGGAGTTAAATTT
agaccaaaaaaattgaaatgaaaattttaattctccTACATAGAGGTTAC
TAGCTTTATCATTTCCTTTTTGGTTTTTGGTGAGTTGACTATTTTATAAG
AAGCTTTTCAATGTTCATCATTTTCAGTTTTACACGGACAAGAGACATTC
AATACAAACGAGTNGCAACCAATTTTACGATGTTTTTTGGTATTTAGTGC
TACCTTGGACTCTGATAGAGTTCAATCCTCCCAGCTtagaaaaacataaa
ataagcaaatttctttttcgtatagtctatttgatttgattttttttttt
aacaaagttaATCTTTGGACGATTTTTTGTTAGTCGTTTACCGTCTAGTG
GTAGCTTTATTACCAATCATTTGTTACTCAATTTTATCGTGAAAGATTAA
CGGACAGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAAACTTTC
TGCGTAGGCCTCCGATTTcctcaattcaaaatttcctctACTGACCTTAC
ATACCTTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAAAGCTTG
CTAACCAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTTCAAAAT
ATGctcacacttttttgaaaaataacctttTTTGGCCTTATATAGTGATC
ATGACCTATTGACAATAATAGCCGGTAAATGGGCGTTTTTCTTCGAGTAA
ATGTTTGACGCACATGACCCATTTACAATCAATCCCAGGATCTTATACCT
TCGTTTCTACTTTAGATACTGTTTACACCGAAAGATATATGGGACTGCCT
ACACTTGAAGATAATATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGTC
CGGATGAAGCCATACAATCCTATTACCTTTCGTCTATAAAACCGAACTGA
CCAAACTAAATCTAAAGGTGGTGTCTAAGTTTTCTTGAGTGGAGTTTAAC
CCTCGCATGATTAGAATAACCGTCGTAATATTACGTATTTTCGAATCTAT
GATAACAGGAACATTGATATCTTGATCTTTACTAGAGTACAAGTGTCTTG
AGCATGACAAAGAACTTCAGAGGAAAGAACTTTCTACTGATACATGGTAC
AGCAGATGGTGAGAAAGCGTTTCATTGTATAGTATACTTAGTTTCATACT
CGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCAATCACACCAAAAT
AATCCAATCACGATCCTGTACCgttttttataaataagaaatgaattaaa
attaaatcaaaaatcttgTACATCAAATTTCTTGTACATTGAACTACTTT
TGTGAACATTGAACACGTCGCTCCCCTCGTATACTACGAACTAGTGTAAT
AGCAACGAATCGATAGCGcagttgggagagcaatcgcccggcaagcgaga
ggtcgtgggttcaatccccactcgatttgttacctttgagaaaactggga
agtacattagtgcatgatccgttgattcattactgAACTACTTTTAATTC
AAAACTTTTATGTACTTCTAAATTTTCCTTCGTAGATAACGTCCACTTTC
AAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTT
CGAGGACAGGTGTGATTCACTTTTGCCAGCATCGACTGGTATTTTTAATG
GTTATTTTAATTGTTAATTTGCGATCTTCTCTCTTATGGAGTTAAATTTA
gaccaaaaaatttgaaatgaaaattttaattctccTACATAGAGGTTACT
AACTTTATCATTTCCTTTTTGGTTTTCGGTGAGTTGACTATTTTATAAGA
AGCTTTTCAATCTTCATCATTTTCAGTTTTACACGGACAAGAGACATTCA
ATACAAACGAGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGCA
TCTGAGAAATGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATT
ACCCACTCAAATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTT
TTGTCAAATTAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTC
TCCGTGGTGGACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGC
CAGGACATCTAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGA
GGTTATCATACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTAT
TCACTTAATTAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTT
AATGACTGCAAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGA
GGAAACCAACGAATGTTGTTTTTCGaaggttaaattttgattttcttata
aaataatgtAATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTTG
AAACGAAAAAAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAA
TCCTACGTTATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAACT
GCATTGCAAAATGTGAAACTTTaaggaaagtttatttttgagTTAAGTAC
TTCTGGTGTTCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTG
ATAGTGACAAGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACA
AGCGAGGGGTAAATTACTCAGAAAacatgattttttaaaaagaataaaag
aatcGTACCAAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGA
AATGTTTTGGCACGTacgtagacgatgctatcgtccgtttagagggtcag
taaacgTGAGAAAGTACAGAGTCAGGAcatcagggcggtttacggggaaa
aagtggcggtagagttttggaacaatgTTAGACAATAATTTTTACACTGT
AAACACCTCTGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAA
TTTATCCCGCTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacg
ataggatcgtcagCACGTACTTTGTGACATTATCTtgtataattttgatt
ttttaattttgtttaataattgtttattatttactatgtgtaaaagaaaa
ttatattGTGTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAATA
TAATGAAAGAAATTATCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:308935..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12358	1.64105	0.674934	0	0	1.36069	0.0467363	0.301071	2.60313	2.39106	3.36737	1.12529	1.76157	4.11903	1.94667	2.47493	2.02337	2.46497	5.35425	6.04592	1.79473	1.90091	4.09629	2.53955	8.72332	4.5918	6.62328	6.00467	0.681457	0.280477

Blast

[Close]

BLAST of TCONS_00060380 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 2.852e-120
Identity = 247/749 (32.98%), Postives = 413/749 (55.14%), Query Frame = 2

Query:  101 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2272
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060380 vs. Swiss-Prot (Human)

BLAST of TCONS_00060380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	2.852e-120	32.98	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

You are here

TCONS_00060380 (transcript) - C. hemisphaerica