TCONS_00060339 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060339
Unique NameTCONS_00060339
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060339 ID=TCONS_00060339|Name=TCONS_00060339|organism=Clytia hemisphaerica|type=transcript|length=135bp
cctTCAGCGATAGTTGATGTGCTGTTGTTGTTACCCATCTTGATCTCTGA
ATGAAATGGCTGGAAATGATTTGCTCATTTGCTCATCGACCTTTTATACA
TGCAACATtgagctaaaaagaaaaatgcaacATTA
Run BLAST on NCBI

transcript from alignment at scaffold_340:34817..34951

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060339 ID=TCONS_00060339|Name=TCONS_00060339|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at scaffold_340:34817..34951 (Clytia hemisphaerica)
TAATgttgcatttttctttttagctcaATGTTGCATGTATAAAAGGTCGA
TGAGCAAATGAGCAAATCATTTCCAGCCATTTCATTCAGAGATCAAGATG
GGTAACAACAACAGCACATCAACTATCGCTGAagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037962XLOC_037962Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060339-exon-scaffold_340-1491911889:34817..34951TCONS_00060339-exon-scaffold_340-1491911889:34817..34951Clytia hemisphaericaexon
TCONS_00060339-exon-scaffold_340-1510915933:34817..34951TCONS_00060339-exon-scaffold_340-1510915933:34817..34951Clytia hemisphaericaexon
TCONS_00060339-exon-scaffold_340-1575043694:34817..34951TCONS_00060339-exon-scaffold_340-1575043694:34817..34951Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:34817..34951 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060339 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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