TCONS_00060322 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060322
Unique NameTCONS_00060322
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1440

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060322 ID=TCONS_00060322|Name=TCONS_00060322|organism=Clytia hemisphaerica|type=transcript|length=1440bp
caaaatctagctaaaagcataacacgcactgcacacggagctttttaata
gagtgctcatttcaataggaaaacaatggttgttctcttgggagaagtgc
cttctagaggtagttggttatctattatttttacatcgttgcttTCACAG
AATTCAACTGCTGTTAACACAAGTTTCCAGAGCCCTGAGGTGAAGCAACT
CATGACATTTAACGACCCAAGCCAACGTGCAATAATCGAGGTTCCAGGTG
ATGGCCACTGTCTTCTCTATACATGGGAAATTTGCTTGCGCTTCACTGAA
GATACTGAAACGATTAAACTTATTACTTACACTTATTTTGAACTAAAAGG
CTTGCTTTTGAAgcaattcaaatcaaatgagGAGTTGTACAAACAGTTTT
TATGTTATGACGAAGTAAACGTCGACCTTGAAGAAGAGATAAGGAAGTAT
ctttatgaaaaaatgtttgCTAAGTAGCGGACGAGCTGCTATTTGATGCC
TTGACGAATGCAACAAAAGTCAAGGTCTATATGTGGGAAAGAGAAGCTGA
TGGATCGTTTTCTAACACTGGTGAATACCAGTAAACAAATTATTCAATTC
GATTATTCACGTTCACAAATGAAGCAACCAGTTATGAAAACAGTAGACTG
TAAATATACAACTTAGATTCCCAGGCTAGGGATACGTTAAAATGTATTCG
TTTTTTCTTGAACAGCTATTTCGttatcttcaattttcattaagtttTGG
GAATGTTACTACTCTTCACTAATATTTTAATCAACTTATTTAGAAATGGC
GAATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGACTCGACGAA
TGTCAGCAATGAGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGG
AATGAAAAAAGTCAACTTACTCATTCCAATCATGATTCAGACCTGTTTGG
AACTACACTGGATAGTATAGATGACGAATCACTGCTGGGACACGTTGGAG
aaattgatgaTGTTTTGGCTGTATTCGAGactTCTGCTTTGCGTCCTGAT
GTTATTGATTTGAGAGACGAGGCAAGCTGTGAAGATGACGACGACATTGA
CAAATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGTACTGTAA
CTCATTCAACAAAATGCTTCATTAACCTTTCACCGGAAGATACCTTCGAA
CGAGTTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGC
AATCGAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTA
AGGACATCATCATACATGGCTTCATTTTGCATTTACTGAGCATCCATGGC
GAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTC
GACTTTTCCATCCACTAATAAATTGCCTGATGGCGTCAAG
Run BLAST on NCBI

protein sequence of TCONS_00060322-protein

>TCONS_00060322-protein ID=TCONS_00060322-protein|Name=TCONS_00060322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
MANVLSSTHGMSLQQTRRMSAMSPFEVRNSTEKSRNEKSQLTHSNHDSDL
FGTTLDSIDDESLLGHVGEIDDVLAVFETSALRPDVIDLRDEASCEDDDD
IDKSNPETISITRQKCTVTHSTKCFINLSPEDTFERVVNEPERNIVMVKT
GAIEVKDVNLKALAKGKLKDIIIHGFILHLLSIHGESNVGLIDCTVLGQA
ISTFPSTNKLPDGVK
Run BLAST on NCBI

transcript from alignment at scaffold_340:41841..47724-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060322 ID=TCONS_00060322|Name=TCONS_00060322|organism=Clytia hemisphaerica|type=transcript|length=5884bp|location=Sequence derived from alignment at scaffold_340:41841..47724- (Clytia hemisphaerica)
CAAAATCTAGCTAAAAGCATAACACGCACTGCACACGGAGCTTTTTAATA
GAGTGCTCATTTCAATAGGAAAACAATGGTTGTTCTCTTGGGAGAAGTGC
CTTCTAGAGGTAGTTGGTTATCTATTATTTTTACATCGTTGCTTTCACAG
AATTCAACTGCTGTTAACACAAGTTTCCAGAGCCCTGAGGTGAAGCAACT
CATGTAAGTCCCTTTTTGTTTTATTTTCATTTTTCGTGAAGTTTATTTTA
GCTTTGTTACCTTGAACTTGACAGTAAAGGGCTTAAATTTTAAATTTTTC
TCAGATATACAGTTTTTTACGCGATTACAATAATAGCTGTATGTGACTGA
AGTAAATTTCGCAATTATTATTTCAAAACTAATTGACAGCTCTAAAATAC
TAAAATTGTATTGTAATTGTATTGTAGGATAAAGAAACGCTTGGGTAGTT
TTTCATTCTATTACATTAATTTCTTCCATCATTCCAGGACATTTAACGAC
CCAAGCCAACGTGCAATAATCGAGGTTCCAGGTGATGGCCACTGTCTTCT
CTATACATGGGAAATTTGCTTGCGCTTCACTGAAGATACTGAAACGATTA
AACTTATTACTTACACTTATTTTGAACTAAAAGGCTTGCTTTTGAAGCAA
TTCAAATCAAATGAGGAGTTGTACAAACAGTTTTTATGTTATGACGAAGT
AAACGTCGACCTTGAAGAAGAGATAAGGAAGTATCTTTATGAAAAAATGT
TTGCTAAGTAGCGGACGAGCTGCTATTTGATGCCTTGACGAATGCAACAA
AAGTCAAGGTCTATATGTGGGAAAGAGAAGCTGATGGATCGTTTTCTAAC
ACTGGTGAATACCAGTAAACAAATTATTCAATTCGATTATTCACGTTCAC
AAATGAAGCAACCAGTTATGAAAACAGTAGACTGTAAATATACAACTTAG
ATTCCCAGGCTAGGGATACGTTAAAATGTATTCGTTTTTTCTTGAACAGC
TATTTCGTTATCTTCAATTTTCATTAAGTTTTGGGAATGTTACTACTCTT
CACTAATATTTTAATCAACTTATTTAGAAATGGCGAATGTTTTATCGTCG
ACTCATGGTATGTCATTACAGCAGACTCGACGAATGTCAGCAATGAGTAA
GATTATTGATTATCATTATTTTCATTCATAGAATTTTATTTCACAGGTCT
ATTTCACTTGACCTCTACAAAATAATTATGAAATTNAAATTTTATTTCAC
ATGTCTATTTCACTTGACCTCAACAAAATAATTATGAATTTTTTAATGAG
CCATTCCCAATTTCACAGTACTAGAGCGCTGATACTAACAAATGCATGCA
TGGCTTAATCTTTGAGATAGGTATATGACTATACTGGCAGGATCAACCAG
TAAAACGGTCCGAAATTCAATATTCATTATAAACACTTTAATTTCTCTAC
TTTAGGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAA
AAAGTCAACTTACTCATTCCGTATTTTGATTTCGTTAGAATTTATTTATT
TGGGTAATTAAAGTGCCTCAAAAAGTATATGTAATACTTTAATCCCTGAA
TATATTTAAATGGTCTTGGGTCTACTTTTTTAAGTAAATATAATGCTCCT
TCAATCTTGCAAGTTCAATAATCAGGAACTTTCCTACTGATGGTCAGTCC
TACGTGGCCAAATTGATTTGTTGTTTTACAGATCAAGAAAAGCCAAAATG
AGAAAGCAAATGATAAAACAAACATGAAAAAATAAATTCCTCAAGAACTA
GAGTCGGGAGGAAAATAATCAAGGCCAAGCGATTCGTTATCATGACTCAG
CAACGGGAGCCGTAAAACAACTAATCAAATTGGTCTTGCCTGTAAAGTGT
AGCTTTTCATTCAATCAACTGTCACATGAATATTTTTATTTTTCCATTTC
ATTAAGAATCATGATTCAGACCTGTTTGGAACTACACTGGATAGTATAGA
TGACGAATCACTGCTGGGACACGTTGGAGGTATGTGTGCAATTTGAATAG
ACCGAATTGATATATTTCTGAATAGAAAGTGTAAATGTAAAATCATCTTT
TTCGTGTATTGTAACTGATTCAGTATGTCTGTTAGAAATCTCTCCGGTGG
AAGTAGGTCTGTAAGTTGTACTGTAATGTCACAGAAACGTTCAATAAAAG
CAATCCCTTCAAAATGTTTCTCTTAAAAGTCGTTAATAATATTGCCTATA
TCAAATTTGACTTATTATATTTTCTCTTCGGATCTTTGTTTAGAAATTGA
TGATGTTTTGGCTGTATTCGAGGTAAAATTGTGCTTTAATTTATTTACTC
CGTATATTAATTTGTTGAACGCTCGGATTGTTTCAAATTTTTCTTAGGTC
CAGCCTTAGTTATGTTCCTGTGAAAATGTTCAATAATAACAAGAACGTTC
TTTTTTACTTTTTAGACTTCTGCTTTGCGTCCTGATGTTATTGATTTGTA
AGATATTTTACATATTTATTATCTAAAGATTATCTGACATTCAAACATCC
AACACCCTGTCGTTCCATGAAATTCAGCCGCTAACTGACCAGCGCAACTG
TGCACATTGTATAGATCACTCTTCCTACTTGAACCCCATTGAAAATGTCG
AAGAATCCACCCATACTCTACTAAAAGTAATATCAGAGAAAAAATAGTGA
GAATCAAGAATATTTTCGTCAACCACTTATTCTGTTGTACAGAATATTTT
TTTCGAATACTAGATGCTCCACACCCACTACAGTACAGACTCTTCTTTCT
CAATTGGAATTTCTCATATTTTGACAAACCTGATGTTTTATAGGAGAGAC
GAGGCAAGCTGTGAAGATGACGACGACATTGACAAATCAAACCCCGAGAC
AATTAGTATTACTCGACAGAAATGTACTGGTAAGAATAAATAGGGTAAAA
GGGTGACAAAAACCAGTTTGCTGAATCCGATTCTCCTAATTTTTATGATG
GCGATGACTTCATCGACGGGTTTGGTCGCTACCTAGCGTAGATTCCTGCG
CTGTGATTGGCTTAGAAATTTCGTGAAATGTTGTAATGACTTTCGGGAAT
TCTCCATATCAAGTCAAAAGACAAAGAATGTTTCAGAAATAAAAACGCAA
ACACTTTTTCAACAAAAAAGGTTAAGTTTATATTTGTGTCAATTAATAGC
GTGACGAGACACGACTGCACACCCCACAGGTGTAATCTGGCTCGAAAGAG
CCATCACAAAAATAATTTTGATTTCTAGTAACTCATTCAACAAAATGCTT
CATTAACCTTTCACCGGAAGATAGTAAGTGCGATATTTGATTCAGGTAAA
AGGGGGTGATGATGCTTAGGATCCTACTCTTAGAATCATACTCTATACTC
AGGGAAATAATATTATATATGAAAGCGTTGCCGCGCTAAAGGCAAATGGC
ACGATATTTCTTAAAACAGGTTTTGTCGGTAGGACTGGGTTATTTTTCCC
TGAATCCTAAAACAATGGAAACACTTAAAAAGGTTTTACATTAAAATGAT
AGTATATAAGCTAGTTGAAAGGAATTTTAATTTGATTGATTCACAAAATT
TGAAAGAATAGACAAAATTAAACGATTACCACATCGATAAGGATTAAAAC
TTAGATTTCCAACTGTAAACGAGAAACCTGGAAATGAAAACCCGTTTGCT
CAGGTTTGCATCCAAATAGTCTGCACTTTAATATAATCCCAGACACTTCC
AGGCAGTGTGTTCAGAAAACAAGTGTGATAGACTCTCTACTTTTCGCTGA
TAAACAGTATTACATCTTAGCTGAGAGTTCAGAGTTCAGCAGGAATATTT
TATCTGGGAATCTCTGTATTTTGATCGTAATTCGATTGCAATTCTTGAAA
AATTACGTGGATCATAAGGGTTGATTCCATTGATAGCAAACGGGGATAGC
AATTACAGTAAATATTAATAGACCGATTCCTAGTGACGTCAATTTCGTCA
ACGATTAGCCATTCTTCTGAAAAATAGTATGAAGAATATAGGGTGATTAC
ACCTTTCTCTACAAAGGTTGTAAATTATTCCTATTTGGACCTGCGCTTAG
TAGTTTGTTTGTTTTTGTTTAGTCTTCGTTTTATTCGCTTAGAACAGATC
ATCGATTTATTATAGAGAACTATAATAAATCAATGAACAGATTAAAGCAC
ACTTAAAGCGAATGGTCTTTGTGTCTATGTGGTGTCGCTAATTTAGATAA
TTGGTAATTTTTCAGTTCGTTTCACTATTTAGCCTTCGAACGAGTTGTTA
ATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATCGAGGTC
AAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCAT
CATACATGGCTTCATTTTGCATTTACTGAGCATCCATGTAAGTTTTTTTA
TCTTAAGTCTGTTCTTAAAATTATATTGAAATGATTTTGACGCCTTGCTC
TGAGAAGAGACAAGATTTCAGGGCACTCTACGTGTCCACCAAAGCAAAGG
TCATTACATCTGACGGAGACACTGATATTTTTGACATTCATGCTGGAGTT
CTACAAGGTGACACCTTAGCTCCCTTTCTTTTTATCATTGTTTTAGATTA
TGTTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTGGGCACTGCAATGGCTGATCGAGAGCTGTGGAGGGATGGTTATTGT
TTGTTTCCGACCTAGGTCCATTCGGACCTAGGTCGAAGGATGATGATGAT
GATGATGACAAGATTTATCAAAAAGGAATACCTCACCGAAAAAATAATTT
CGAGCGCATCATTTTAAAGGCTTACAATCTTTAGCCTACTTAGCGGCTAA
CTTAGAGAAGTTTTTGAAGTTTCAGAAAAGCATAAATCAAGGATATTTAG
TCCAGTAAATAAAATCTTCATTTTTTTCTTCTTCACTTTTCATCTTCATT
TACGAAGTTTTTAAACGAATTTTAAGCCTTAAAATAATGCACTCAAGGAG
ATAATCAAATAATGCTTAATTTAATGTTGTCAGTACCACCATAAGCTCCA
AATTCATGATCCAGTATACATGAAACCTTTCATATACAAAGGGCGAAAGT
AATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTCGACTTT
TCCATCCACTAATAAATTGCCTGATGGCGTCAAG

Coding sequence (CDS) from alignment at scaffold_340:41841..47724-

>TCONS_00060322 ID=TCONS_00060322|Name=TCONS_00060322|organism=Clytia hemisphaerica|type=CDS|length=5805bp|location=Sequence derived from alignment at scaffold_340:41841..47724- (Clytia hemisphaerica)
GGCGAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTAT
TTCGACTTTTCCATCCACTAATAAATTGCCTGATGGCGTCAAGCCTTCGA
ACGAGTTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAG
CAATCGAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTT
AAGGACATCATCATACATGGCTTCATTTTGCATTTACTGAGCATCCATTA
ACTCATTCAACAAAATGCTTCATTAACCTTTCACCGGAAGATAGAGAGAC
GAGGCAAGCTGTGAAGATGACGACGACATTGACAAATCAAACCCCGAGAC
AATTAGTATTACTCGACAGAAATGTACTGACTTCTGCTTTGCGTCCTGAT
GTTATTGATTTAAATTGATGATGTTTTGGCTGTATTCGAGAATCATGATT
CAGACCTGTTTGGAACTACACTGGATAGTATAGATGACGAATCACTGCTG
GGACACGTTGGAGGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCG
GAATGAAAAAAGTCAACTTACTCATTCCATGGCGAATGTTTTATCGTCGA
CTCATGGTATGTCATTACAGCAGACTCGACGAATGTCAGCAATGAGGCGA
AAGTAATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTCGA
CTTTTCCATCCACTAATAAATTGCCTGATGGCGTCAAGCCTTCGAACGAG
TTGTTAATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATC
GAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGA
CATCATCATACATGGCTTCATTTTGCATTTACTGAGCATCCATTAACTCA
TTCAACAAAATGCTTCATTAACCTTTCACCGGAAGATAGAGAGACGAGGC
AAGCTGTGAAGATGACGACGACATTGACAAATCAAACCCCGAGACAATTA
GTATTACTCGACAGAAATGTACTGACTTCTGCTTTGCGTCCTGATGTTAT
TGATTTAAATTGATGATGTTTTGGCTGTATTCGAGAATCATGATTCAGAC
CTGTTTGGAACTACACTGGATAGTATAGATGACGAATCACTGCTGGGACA
CGTTGGAGGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATG
AAAAAAGTCAACTTACTCATTCCATGGCGAATGTTTTATCGTCGACTCAT
GGTATGTCATTACAGCAGACTCGACGAATGTCAGCAATGAGGCGAAAGTA
ATGTTGGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTCGACTTTT
CCATCCACTAATAAATTGCCTGATGGCGTCAAGCCTTCGAACGAGTTGTT
AATGAACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATCGAGGT
CAAAGACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCA
TCATACATGGCTTCATTTTGCATTTACTGAGCATCCATTAACTCATTCAA
CAAAATGCTTCATTAACCTTTCACCGGAAGATAGAGAGACGAGGCAAGCT
GTGAAGATGACGACGACATTGACAAATCAAACCCCGAGACAATTAGTATT
ACTCGACAGAAATGTACTGACTTCTGCTTTGCGTCCTGATGTTATTGATT
TAAATTGATGATGTTTTGGCTGTATTCGAGAATCATGATTCAGACCTGTT
TGGAACTACACTGGATAGTATAGATGACGAATCACTGCTGGGACACGTTG
GAGGTCCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAAAA
AGTCAACTTACTCATTCCATGGCGAATGTTTTATCGTCGACTCATGGTAT
GTCATTACAGCAGACTCGACGAATGTCAGCAATGAGGCGAAAGTAATGTT
GGTTTAATCGATTGCACAGTGTTGGGTCAAGCTATTTCGACTTTTCCATC
CACTAATAAATTGCCTGATGGCGTCAAGCCTTCGAACGAGTTGTTAATGA
ACCTGAGAGAAATATTGTCATGGTTAAAACAGGAGCAATCGAGGTCAAAG
ACGTCAACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCATCATA
CATGGCTTCATTTTGCATTTACTGAGCATCCATTAACTCATTCAACAAAA
TGCTTCATTAACCTTTCACCGGAAGATAGAGAGACGAGGCAAGCTGTGAA
GATGACGACGACATTGACAAATCAAACCCCGAGACAATTAGTATTACTCG
ACAGAAATGTACTGACTTCTGCTTTGCGTCCTGATGTTATTGATTTAAAT
TGATGATGTTTTGGCTGTATTCGAGAATCATGATTCAGACCTGTTTGGAA
CTACACTGGATAGTATAGATGACGAATCACTGCTGGGACACGTTGGAGGT
CCCTTTGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAAAAAGTCA
ACTTACTCATTCCATGGCGAATGTTTTATCGTCGACTCATGGTATGTCAT
TACAGCAGACTCGACGAATGTCAGCAATGAGGCGAAAGTAATGTTGGTTT
AATCGATTGCACAGTGTTGGGTCAAGCTATTTCGACTTTTCCATCCACTA
ATAAATTGCCTGATGGCGTCAAGCCTTCGAACGAGTTGTTAATGAACCTG
AGAGAAATATTGTCATGGTTAAAACAGGAGCAATCGAGGTCAAAGACGTC
AACTTAAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCATCATACATGG
CTTCATTTTGCATTTACTGAGCATCCATTAACTCATTCAACAAAATGCTT
CATTAACCTTTCACCGGAAGATAGAGAGACGAGGCAAGCTGTGAAGATGA
CGACGACATTGACAAATCAAACCCCGAGACAATTAGTATTACTCGACAGA
AATGTACTGACTTCTGCTTTGCGTCCTGATGTTATTGATTTAAATTGATG
ATGTTTTGGCTGTATTCGAGAATCATGATTCAGACCTGTTTGGAACTACA
CTGGATAGTATAGATGACGAATCACTGCTGGGACACGTTGGAGGTCCCTT
TGAAGTCAGGAATTCAACAGAAAAGTCTCGGAATGAAAAAAGTCAACTTA
CTCATTCCATGGCGAATGTTTTATCGTCGACTCATGGTATGTCATTACAG
CAGACTCGACGAATGTCAGCAATGAGGCGAAAGTAATGTTGGTTTAATCG
ATTGCACAGTGTTGGGTCAAGCTATTTCGACTTTTCCATCCACTAATAAA
TTGCCTGATGGCGTCAAGCCTTCGAACGAGTTGTTAATGAACCTGAGAGA
AATATTGTCATGGTTAAAACAGGAGCAATCGAGGTCAAAGACGTCAACTT
AAAAGCCCTCGCCAAGGGGAAACTTAAGGACATCATCATACATGGCTTCA
TTTTGCATTTACTGAGCATCCATTAACTCATTCAACAAAATGCTTCATTA
ACCTTTCACCGGAAGATAGAGAGACGAGGCAAGCTGTGAAGATGACGACG
ACATTGACAAATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGT
ACTGACTTCTGCTTTGCGTCCTGATGTTATTGATTTAAATTGATGATGTT
TTGGCTGTATTCGAGAATCATGATTCAGACCTGTTTGGAACTACACTGGA
TAGTATAGATGACGAATCACTGCTGGGACACGTTGGAGGTCCCTTTGAAG
TCAGGAATTCAACAGAAAAGTCTCGGAATGAAAAAAGTCAACTTACTCAT
TCCATGGCGAATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGAC
TCGACGAATGTCAGCAATGAGGCGAAAGTAATGTTGGTTTAATCGATTGC
ACAGTGTTGGGTCAAGCTATTTCGACTTTTCCATCCACTAATAAATTGCC
TGATGGCGTCAAGCCTTCGAACGAGTTGTTAATGAACCTGAGAGAAATAT
TGTCATGGTTAAAACAGGAGCAATCGAGGTCAAAGACGTCAACTTAAAAG
CCCTCGCCAAGGGGAAACTTAAGGACATCATCATACATGGCTTCATTTTG
CATTTACTGAGCATCCATTAACTCATTCAACAAAATGCTTCATTAACCTT
TCACCGGAAGATAGAGAGACGAGGCAAGCTGTGAAGATGACGACGACATT
GACAAATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGTACTGA
CTTCTGCTTTGCGTCCTGATGTTATTGATTTAAATTGATGATGTTTTGGC
TGTATTCGAGAATCATGATTCAGACCTGTTTGGAACTACACTGGATAGTA
TAGATGACGAATCACTGCTGGGACACGTTGGAGGTCCCTTTGAAGTCAGG
AATTCAACAGAAAAGTCTCGGAATGAAAAAAGTCAACTTACTCATTCCAT
GGCGAATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGACTCGAC
GAATGTCAGCAATGAGGCGAAAGTAATGTTGGTTTAATCGATTGCACAGT
GTTGGGTCAAGCTATTTCGACTTTTCCATCCACTAATAAATTGCCTGATG
GCGTCAAGCCTTCGAACGAGTTGTTAATGAACCTGAGAGAAATATTGTCA
TGGTTAAAACAGGAGCAATCGAGGTCAAAGACGTCAACTTAAAAGCCCTC
GCCAAGGGGAAACTTAAGGACATCATCATACATGGCTTCATTTTGCATTT
ACTGAGCATCCATTAACTCATTCAACAAAATGCTTCATTAACCTTTCACC
GGAAGATAGAGAGACGAGGCAAGCTGTGAAGATGACGACGACATTGACAA
ATCAAACCCCGAGACAATTAGTATTACTCGACAGAAATGTACTGACTTCT
GCTTTGCGTCCTGATGTTATTGATTTAAATTGATGATGTTTTGGCTGTAT
TCGAGAATCATGATTCAGACCTGTTTGGAACTACACTGGATAGTATAGAT
GACGAATCACTGCTGGGACACGTTGGAGGTCCCTTTGAAGTCAGGAATTC
AACAGAAAAGTCTCGGAATGAAAAAAGTCAACTTACTCATTCCATGGCGA
ATGTTTTATCGTCGACTCATGGTATGTCATTACAGCAGACTCGACGAATG
TCAGCAATGAGGCGAAAGTAATGTTGGTTTAATCGATTGCACAGTGTTGG
GTCAAGCTATTTCGACTTTTCCATCCACTAATAAATTGCCTGATGGCGTC
AAGCCTTCGAACGAGTTGTTAATGAACCTGAGAGAAATATTGTCATGGTT
AAAACAGGAGCAATCGAGGTCAAAGACGTCAACTTAAAAGCCCTCGCCAA
GGGGAAACTTAAGGACATCATCATACATGGCTTCATTTTGCATTTACTGA
GCATCCATTAACTCATTCAACAAAATGCTTCATTAACCTTTCACCGGAAG
ATAGAGAGACGAGGCAAGCTGTGAAGATGACGACGACATTGACAAATCAA
ACCCCGAGACAATTAGTATTACTCGACAGAAATGTACTGACTTCTGCTTT
GCGTCCTGATGTTATTGATTTAAATTGATGATGTTTTGGCTGTATTCGAG
AATCATGATTCAGACCTGTTTGGAACTACACTGGATAGTATAGATGACGA
ATCACTGCTGGGACACGTTGGAGGTCCCTTTGAAGTCAGGAATTCAACAG
AAAAGTCTCGGAATGAAAAAAGTCAACTTACTCATTCCATGGCGAATGTT
TTATCGTCGACTCATGGTATGTCATTACAGCAGACTCGACGAATGTCAGC
AATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037950XLOC_037950Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060322-proteinTCONS_00060322-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060322-exon-scaffold_340-1575043694:47522..47724TCONS_00060322-exon-scaffold_340-1575043694:47522..47724Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:46579..47237TCONS_00060322-exon-scaffold_340-1575043694:46579..47237Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:46205..46269TCONS_00060322-exon-scaffold_340-1575043694:46205..46269Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:45696..45768TCONS_00060322-exon-scaffold_340-1575043694:45696..45768Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:45403..45431TCONS_00060322-exon-scaffold_340-1575043694:45403..45431Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:45228..45259TCONS_00060322-exon-scaffold_340-1575043694:45228..45259Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:44796..44881TCONS_00060322-exon-scaffold_340-1575043694:44796..44881Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:44402..44446TCONS_00060322-exon-scaffold_340-1575043694:44402..44446Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:43288..43442TCONS_00060322-exon-scaffold_340-1575043694:43288..43442Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1575043694:41841..41933TCONS_00060322-exon-scaffold_340-1575043694:41841..41933Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:47522..47724TCONS_00060322-exon-scaffold_340-1510915933:47522..47724Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:46579..47237TCONS_00060322-exon-scaffold_340-1510915933:46579..47237Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:46205..46269TCONS_00060322-exon-scaffold_340-1510915933:46205..46269Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:45696..45768TCONS_00060322-exon-scaffold_340-1510915933:45696..45768Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:45403..45431TCONS_00060322-exon-scaffold_340-1510915933:45403..45431Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:45228..45259TCONS_00060322-exon-scaffold_340-1510915933:45228..45259Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:44796..44881TCONS_00060322-exon-scaffold_340-1510915933:44796..44881Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:44402..44446TCONS_00060322-exon-scaffold_340-1510915933:44402..44446Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:43288..43442TCONS_00060322-exon-scaffold_340-1510915933:43288..43442Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1510915933:41841..41933TCONS_00060322-exon-scaffold_340-1510915933:41841..41933Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:47522..47724TCONS_00060322-exon-scaffold_340-1491911889:47522..47724Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:46579..47237TCONS_00060322-exon-scaffold_340-1491911889:46579..47237Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:46205..46269TCONS_00060322-exon-scaffold_340-1491911889:46205..46269Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:45696..45768TCONS_00060322-exon-scaffold_340-1491911889:45696..45768Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:45403..45431TCONS_00060322-exon-scaffold_340-1491911889:45403..45431Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:45228..45259TCONS_00060322-exon-scaffold_340-1491911889:45228..45259Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:44796..44881TCONS_00060322-exon-scaffold_340-1491911889:44796..44881Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:44402..44446TCONS_00060322-exon-scaffold_340-1491911889:44402..44446Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:43288..43442TCONS_00060322-exon-scaffold_340-1491911889:43288..43442Clytia hemisphaericaexon
TCONS_00060322-exon-scaffold_340-1491911889:41841..41933TCONS_00060322-exon-scaffold_340-1491911889:41841..41933Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_340supercontigscaffold_340:41841..47724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14285	0.225142	0.0395615	0.206242	0.952408	1.00107	1.03622	1.53283	0.991764	0.776766	1.44236	1.00385	1.43558	1.30179	0.176663	0.341316	0.398638	0.486164	0.23347	0.379259	0.423568	0.317696	0.297968	0.27693	8.23797	12.9859	0.171673	0.13363	0.0876652	0.130805
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060322 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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