TCONS_00060307 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060307
Unique NameTCONS_00060307
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060307 ID=TCONS_00060307|Name=TCONS_00060307|organism=Clytia hemisphaerica|type=transcript|length=112bp
AGTCACTTCCGTTAGCTTGCGCTTAGGGTTTGGCGGTGGACTTGGGGGTG
CGGGTTACTACGTAAACCCCATCTAGTTCTATTTCATCAAATCAGATAGG
CTCAGATCCACG
Run BLAST on NCBI

transcript from alignment at scaffold_339:462938..463049

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060307 ID=TCONS_00060307|Name=TCONS_00060307|organism=Clytia hemisphaerica|type=transcript|length=112bp|location=Sequence derived from alignment at scaffold_339:462938..463049 (Clytia hemisphaerica)
CGTGGATCTGAGCCTATCTGATTTGATGAAATAGAACTAGATGGGGTTTA
CGTAGTAACCCGCACCCCCAAGTCCACCGCCAAACCCTAAGCGCAAGCTA
ACGGAAGTGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037940XLOC_037940Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060307-exon-scaffold_339-1491911889:462938..463049TCONS_00060307-exon-scaffold_339-1491911889:462938..463049Clytia hemisphaericaexon
TCONS_00060307-exon-scaffold_339-1510915933:462938..463049TCONS_00060307-exon-scaffold_339-1510915933:462938..463049Clytia hemisphaericaexon
TCONS_00060307-exon-scaffold_339-1575043694:462938..463049TCONS_00060307-exon-scaffold_339-1575043694:462938..463049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:462938..463049 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060307 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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