TCONS_00060294 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060294
Unique NameTCONS_00060294
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060294 ID=TCONS_00060294|Name=TCONS_00060294|organism=Clytia hemisphaerica|type=transcript|length=363bp
TTTATCATGCCCAATAAAAGCATGCGATCCACGTGCAaaaaccacttttg
ttttccccCACCAATTAAAATGCGGGATATGAGTTATTTGAGGAAACTCA
GGGCAAACACACACAAAATGGCAGCAAAATTCAACCTAttctaaatgata
tttcatgaTTGGAAAGTCTATGAGCTTGTTTTTTAGTCAGtattttcttt
ctattgttgtcatttttttcctgtTTTCAATTTCTCTATAAAAATCCGAT
TACACATTCAAAAAGCTAAATTTGGgcatttaccttgccaatgctgTTAA
TATTGCCaaaccaatttcaagaaaaagattTATAGGTTTTCTCAAAATTA
ACTTTCAAATTAG
Run BLAST on NCBI

transcript from alignment at scaffold_339:243673..244035

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060294 ID=TCONS_00060294|Name=TCONS_00060294|organism=Clytia hemisphaerica|type=transcript|length=363bp|location=Sequence derived from alignment at scaffold_339:243673..244035 (Clytia hemisphaerica)
CTAATTTGAAAGTTAATTTTGAGAAAACCTATAaatctttttcttgaaat
tggtttGGCAATATTAAcagcattggcaaggtaaatgcCCAAATTTAGCT
TTTTGAATGTGTAATCGGATTTTTATAGAGAAATTGAAAacaggaaaaaa
atgacaacaatagaaagaaaataCTGACTAAAAAACAAGCTCATAGACTT
TCCAAtcatgaaatatcatttagaaTAGGTTGAATTTTGCTGCCATTTTG
TGTGTGTTTGCCCTGAGTTTCCTCAAATAACTCATATCCCGCATTTTAAT
TGGTGggggaaaacaaaagtggttttTGCACGTGGATCGCATGCTTTTAT
TGGGCATGATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037929XLOC_037929Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060294-exon-scaffold_339-1491911889:243673..244035TCONS_00060294-exon-scaffold_339-1491911889:243673..244035Clytia hemisphaericaexon
TCONS_00060294-exon-scaffold_339-1510915933:243673..244035TCONS_00060294-exon-scaffold_339-1510915933:243673..244035Clytia hemisphaericaexon
TCONS_00060294-exon-scaffold_339-1575043694:243673..244035TCONS_00060294-exon-scaffold_339-1575043694:243673..244035Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:243673..244035 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060294 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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