|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060287 ID=TCONS_00060287|Name=TCONS_00060287|organism=Clytia hemisphaerica|type=transcript|length=882bp
CTGCTTCATTCATCCTGAGGCTTACCATAATGGAAaactaccctgaaaat
ttcaattcgaTAGCTTTcctcaatcctgagaaaaggctGACAAGGTGCGC
GAAAACCCCCTAAAACGTGTTTTGAGAAAACGGCGCAGAAAGATGAAAAT
AGaggtttttctaaatttttctgcgatacatagaccgttttacaaaattt
ttgctgtggttGACTAAAATGGATTGACACATTacttttaatgttgaaaa
ggtactggaaatactaaaatagtccaaattttttgaaaaaaatggccttC
CCCGTGCTCCGGGAATCTCCAAGTATTTTGCGTTTTAACTCTGCGTACGA
CGCAAACATGGctttaagtcaataaaagtgcattttctcatcaaaaaaca
TATTGCCAACAAAATATATCATCCTTGTGCTCTCTCAAATCTGTTTATAT
CATTTACAGGTGAATTTCAGTGTTGATCTTAGGGAAACGTGTCTTCGGCG
GTCGGGTTGAACGTCAATCAATCATGATGCAATGGCAtagttttactcaa
ttttctGGGATCGCCTCTGGCGCCATGATTCATCaaagactagatttcca
ctggaTTTAAGACTCACAatggatacatcattgaataCGTTTGGTTCCTN
AATGCTATGTTTAGAGCAGCCATACGGAAATGAGGCCTTAGCAACGGATG
CGATTTCCCGTTGCTAAGGAGAAAATTGTATACCAGGGCTCATAAGAAAC
CCAATATCTCGGCAGATATTTATGCTACggtcttgaaattttcagggtat
gttcaggaaggataaaggatcctaaaaagccctaaatctcgaaattgata
aatttttcaccaaatttcaaaatctcatatga Run BLAST on NCBI transcript from alignment at scaffold_339:58374..59255 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060287 ID=TCONS_00060287|Name=TCONS_00060287|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at scaffold_339:58374..59255 (Clytia hemisphaerica)
tcatatgagattttgaaatttggtgaaaaatttatcaatttcgagattta
gggctttttaggatcctttatccttcctgaacataccctgaaaatttcaa
gaccGTAGCATAAATATCTGCCGAGATATTGGGTTTCTTATGAGCCCTGG
TATACAATTTTCTCCTTAGCAACGGGAAATCGCATCCGTTGCTAAGGCCT
CATTTCCGTATGGCTGCTCTAAACATAGCATTNAGGAACCAAACGtattc
aatgatgtatccatTGTGAGTCTTAAAtccagtggaaatctagtctttGA
TGAATCATGGCGCCAGAGGCGATCCCagaaaattgagtaaaactaTGCCA
TTGCATCATGATTGATTGACGTTCAACCCGACCGCCGAAGACACGTTTCC
CTAAGATCAACACTGAAATTCACCTGTAAATGATATAAACAGATTTGAGA
GAGCACAAGGATGATATATTTTGTTGGCAATAtgttttttgatgagaaaa
tgcacttttattgacttaaagCCATGTTTGCGTCGTACGCAGAGTTAAAA
CGCAAAATACTTGGAGATTCCCGGAGCACGGGGaaggccatttttttcaa
aaaatttggactattttagtatttccagtaccttttcaacattaaaagtA
ATGTGTCAATCCATTTTAGTCaaccacagcaaaaattttgtaaaacggtc
tatgtatcgcagaaaaatttagaaaaacctCTATTTTCATCTTTCTGCGC
CGTTTTCTCAAAACACGTTTTAGGGGGTTTTCGCGCACCTTGTCagcctt
ttctcaggattgaggAAAGCTAtcgaattgaaattttcagggtagttTTC
CATTATGGTAAGCCTCAGGATGAATGAAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060287-exon-scaffold_339-1491911889:58374..59255 | TCONS_00060287-exon-scaffold_339-1491911889:58374..59255 | Clytia hemisphaerica | exon |
| TCONS_00060287-exon-scaffold_339-1510915933:58374..59255 | TCONS_00060287-exon-scaffold_339-1510915933:58374..59255 | Clytia hemisphaerica | exon |
| TCONS_00060287-exon-scaffold_339-1575043694:58374..59255 | TCONS_00060287-exon-scaffold_339-1575043694:58374..59255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:58374..59255 . |
Blast
The following BLAST results are available for this feature:
|
