TCONS_00060281 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060281
Unique NameTCONS_00060281
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3678

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060281 ID=TCONS_00060281|Name=TCONS_00060281|organism=Clytia hemisphaerica|type=transcript|length=3678bp
GGAATATATTGTTTAATTCAGGACCAAGTGAAGGTCCCttttattagaaa
aatttcaaattacttCAATCCAATGAAAACGTAGATTGGATTCGATTATC
AAGAGAGATAGTTTTTGTGTTCGAAGTTCTTTTTATTGGACTTGGACAAA
AGCAATCAACATGAAAATGGCGCTTTCAATAGCGTTCTTTATAACCGCCT
GCTACCAACTTGCTTGTGGTGCCAAAACTGCGAATTACGCATGCCCAGAA
ACAACGAGTGACGATGATTCAGTCGTTATTTTCGGATATGTAGTGGAGCA
TGACAATGTTACGGGCACGATACGTTTTCAAACGTTGGAAGTTTTGAAAG
GCGGCAATTGGTCGGATATCGACCAATCAGAGATCGAGGGGCGATTAAGT
GAGAGTTTCACTTCGAAATGTCACACGCCGCGGATGGACGAAGCGTTGGT
TGTTCATTTGAACGATGAGAAAGTGATCAAAAGAATCGCATTCCCTAGTT
CATCACAAGTATCAAGAACTACCCGTGTCCGGCGAAATATTTTCGGACTC
GTTCCCATAAACCGAAAATGCACGAAAAGATGTTCGTTTGGTGGTTCCTG
CGCCTTCCACCCTCTCACCGGGCGGCAGTATTGCTCATGCACCCACATAT
ATTGCTCAAAAGAATACGGGCCAGTGTGTGGCAATGACCAATTCACTTAC
CCTAACGAATGTACCATGCAGCATAATTCGTGTTTCAAACAAAGACGTAT
CACGGTCGCTTATAGAGGGCGTTGTGACGTCAGAAATTgtaaagatttga
aaaagaagGGATACGCCAAGACAGACGGCCATTACTTTTTGCATCCAACG
CCAAAATGTGACAAAGCCATCAAAGTGTATTGTTACGATATGGATTCACC
AGAGCCTAAAGACTTTATCACTTTACCGAGTGGTCCTGAGCATAACATGG
CTTACATTTACGAGAAACGAATGGATCTTAGCAAGAAGTTTGAATGCGAA
GGACCAGTCGGTCCCATCGTTTACAGCAAATCTGGAAGAACTCACTTCTC
TAAGGTAAGGATCAATCTTGCTACGATGACAATCATCCAGGACGATTACA
CATTTGCGACGAGCGATCGCCAAGGTTCGCCAGTACCTTTCGCAACAGGT
GGTGACTGTTTCTCCGCTAAACAAGACGCCAAGTGcagaaaagGAAGCTT
CAAACTAGACATTAGCAACACTGGCTTCAAGATCAGCAGTAAAGTTCGTT
GGACATTGGAAAGTGATACCAACTCGTTAAAAATACAAGACTACCGCAAC
AGTGAAGGTCTTGTGGTGTCCGCTAAGTGTGGTGGCTGGTGTGGCCATTG
TGTACCTCAACCCAAATTGCAAGTGGAATTACAAAGTTGTAATATTAAGA
CTGattcATGTTCAGGCGTGCAATGTCCGTATTACGGGCAATGCTCTGCC
AAAGGGGAGACGTACAAATGTTCATGTCCAAACAAATGCACCAGAGAAGT
GGACCCGGTGTGTGGTAGTGACGGAGTGACGTACTCCAATCGGTGTTCCA
TGAGATATCAATCGTGTGTGGCCAAGAAATTCATTGATGTAAAACACCAA
GGAAGCTGCGgctcACAAGATTGCAGCGAGACattaaaatgtcttttcaa
CTCCAAATGTCAAACCCAGAATGGAGTTTCTCGTTGCAAATGTTCCACAG
TGTGTTCCAACGACATCGAGTTTGTGTGCGGTTCGAACCTTAAGACATAT
CAGAACGAATGCTTCTTGAAGATGGACTCGTGTAAAAACCAACGATCGAT
CAGCGTCAAATATCTCGGTGTTTGCAGGTACAGCCATTCACAGATCTTTG
ATTTCGACATTGCGTTTGCCATCGGTGGAAAATCAATCGACCGTCAAGTG
TTACTTCAACAGCAAAAACAACTCATGTCTTATTTCCTAGACTCGTTTCG
TTTTCCCATTGAGCAAAACGGAATCAGGCTAGCTTTCCTCACCTATGACG
ATAGTGTGAAGATTGTTAAAAATCTCGACCAGAATTTCGTTCTTCCATAC
GTTCGACGTTATCTTGATGAAATGACTTTGGGTGGAGACTCCTCAAAGAT
TGAAAGATCTCTCCAAGGAGCAACCAGTTCTATTTTCACCAGAGCGCGTC
CTGGTGTTCAAAAAATCCTTGTCGTTTTTGCTGATGATAGTTCAGATTCT
GACTTGAACGCTATAAGACAAGCAAAAGAACGACTAGCAGATCAAGGCGT
TCAAGTGATATTGATCTCTTCTGGCAATCGAATGTCCATGTCAATTGCAG
CAGCGATCGCAAGCAGCGGAGATAATTTGATCACTGGGCTGACCTccaaa
aactttttacaaagcTATCAACAGTTCATTGATATCGTtattaatgGTCG
ATGTTCTTTCTTGAAATGTCAATCACCAGAAACGTGCCAGAGCCTCGACA
TGACCAACATCAAATGTGGATGCAACGTGAATTGTCAAAACGCTCTCCAG
CCTGTCTGTTCGTCCACTGGTGTCTCGTATGGAAACCTTTGTTTGATGAA
ACAAGATGCTTGCGTTAAcaagaagaatattttcaagatCAACGATGGCT
TTTGCAAAATTAACAAACCAATGGATGTCTTGGTCACCTTCGATACCTCC
aaccaaatgacgtcacaagacTACGATCGTGTCAAGACATTCTTACGAAA
CGTCGGGAAGTCGTATGACGTCGGTAAAGATAAGGCAAGGATCGGGCTCA
TCAATTTCGGCTCACGTCAAAAAGTAGTGTTGGATCTGAATGAAGGAATC
AGTGAAAAGCGAATCGAAGATGCCGTCCAGAAAGTTACAAATATCGGTGG
CAATCGTGACATTCCAAGAGCAATTCGATTCAGTATCAATCATTTCAGTC
AATACCGCAGAGATTCAGTCCCTAAAGAGTTCATTTTCATTACAAGCAAA
ACAGATGTCGCAAACTCTGGTGTGTTGGAGAGATTGTTCACATCGTTCAG
TCAGAACAATATCAAGCTGAAGTTCGGTATACTTGGTAAACCAACCACTC
GATTTGTGGACTTCTTGACAAAAGGACGGAGCTCTGATCAACTTGTCTCC
ATTGACGATGATGATGAATCCatctttaaattctttaaacttttaaaacc
aACCGTCACTGTTGAAGACAAAATGGACGTCGGCTTCATCTTGACTGGAG
ATAAAAACACATTCCCAAAACAAAGAGATTCCGTTGTTGAGATCATCCGT
AGGCTTCGGATGCAACCAGGAAGTCCGGACATGTCCAATAAAGTTGGGTT
CATCGACCAAGAAAGGTTTTTTCCACTCACCACTGATAAATCATACATCA
TAAGAAATTTACAAAACTCAAAACCAATATCAGACCCAGATCTCAAGAAC
CAGTTCGAGAGAAGCGTACAATTCTTCACACAACAAAATGGTGGACGAAG
CAGTGTACCTAAAGTCTTATTCGCTTTTGttgatgatttgattttgaatt
atGATGCTAATAGTATTGCCTCCTCACTGAAGCGACTTTTAGACCAAGGA
GTGAAGGTTGTCTTGTTGCAGAGTGAAAGTAGTTATAGTTTACAGGTCTT
ACCAACGTTCATCAAAGATCGATTGGATCGTGTAGATATCAACATTGATG
ATTTGAGTGATATCTTGGAGAAAATCCT
Run BLAST on NCBI

transcript from alignment at scaffold_339:369181..380851-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060281 ID=TCONS_00060281|Name=TCONS_00060281|organism=Clytia hemisphaerica|type=transcript|length=11671bp|location=Sequence derived from alignment at scaffold_339:369181..380851- (Clytia hemisphaerica)
GGAATATATTGTTTAATTCAGGACCAAGTGAAGGTCCCTTTTATTAGAAA
AATTTCAAATTACTTCAATCCAATGAAAACGTAGATTGGATTCGATTATC
AAGAGAGATAGTTTTTGTGTTCGAAGTTCTTTTTATTGGACTTGGACAAA
AGCAATCAACATGAAAATGGCGCTTTCAATAGCGTTCTTTATAACCGCCT
GCTACCAACTTGCTTGTGGTGCCAAAACTGCGAATTACGCATGCCCAGAA
ACAACGAGTGACGATGATTCAGTCGTTATTTTCGGATATGTAGTGGAGCA
TGACAATGTTACGGGCACGATACGTTTTCAAACGTTGGAAGTTTTGAAAG
GCGGCAATTGGTCGGATATCGACCAATCAGAGATCGAGGGGCGATTAAGT
GAGAGTTTCACTTCGAAATGTCACACGCCGCGGATGGACGAAGCGTTGGT
TGTTCATTTGAACGATGAGAAAGTGATCAAAAGAATCGCATTCCCTAGTT
CATCACAAGGTATGAAATTCTTTGTATTTCACAAACTGAGGGGATCAAAA
TAGGAACTAATTGGGGAAGAAGATATCTTTTTTCAAACATTTCCTCATTC
AGTTACATTATAATTTTGTTGCCACATTTAATATCACCTTTTGCCTTTTA
AAACAATTTTTGGTCGACGAAAGAAAGTCGTTTTTCATACTTCATTCGAT
TCATCCTAATCCACACGAGGCAAACATTTTATGAAAGAAAAACAGAACAA
TTAAAGATCAAGCTTAATGTTTCTTTTTCCATTTTCAGTATCAAGAACTA
CCCGTGTCCGGCGAAATATTTTCGGACTCGTTCCCATAAACCGAAAATGC
ACGAAAAGATGTTCGTTTGGTGGTTCCTGCGCCTTCCACCCTCTCACCGG
GCGGCAGTATTGCTCATGCACCCACATATATTGCTCAAAAGAATACGGGC
CAGTGTGTGGCAATGACCAATTCACTTACCCTAACGAATGTACCATGCAG
CATAATTCGTGTTTCAAACAAAGACGTATCACGGTCGCTTATAGAGGGCG
TTGTGGTAAGTAGGAATAATACACCTATTTCCTATTAGCGGATTCATGTA
AAAAAGTCACGAAAAACGTCGAGAAAGTCTCTGATTGGCTGAAATATTGC
ATATACAAGCATATTTTTCAAAATGTCCAGTGTATGAGGTAATTTTTGCA
TGCCTCCGCCAATCAAAAGTTTGTTTACTCGACGTTTTTTCGTGACTTTT
GCATGAATCTGCTAATAGGAAATATGTGTATTGCTTTTTCATCAGTTTGA
GTATGAGAAGAATTTATTCTTCAAGACGGTCATAAGTCACAAGATTCGTC
AACAAAGACCTTTATTTCAAAATACTTCTTCTATTTTACATGTCTGACGG
ACCCATGTTCCCTGCCTAATGATGCGAATCTTAGTATACCAAAACATTTA
ACTCTTTGATCGATCTCACAAGCTGTCCTTCAAAGAACCTTGATGATGGT
GTTTTTAATTGCAAAGTATTTTATTCTTCCTTTTCGTAGACGTCAGAAAT
TGTAAAGATTTGAAAAAGAAGGGATACGCCAAGACAGACGGCCATTACTT
TTTGCATCCAACGCCAAAATGTGACAAAGCCATCAAAGTGTATTGTTACG
ATATGGATTCACCAGAGCCTAAAGACTTTATCACTTTACCGAGTGGTCCT
GAGCATAACATGGCTTACATTTACGAGAAACGAATGGATCTTAGCAAGAA
GTTTGAATGCGAAGGACCAGTCGGTCCCATCGTTTACAGCAAATCTGGAA
GAACTCACTTCTCTAAGGTAAGGGATTTTTTGGATTTTAGTATTTCTATT
TAACCAATTTTCAGCTCTCTAAAACGTTTATAAGTGAACTATTATTAGGT
GAACAAAACGCTGTTAAGAAGCTCATATTTACAGTCAACTCTCTTTAATT
CGAATGTTTCTATAATTCGAACTAAAATCTAATTTGTATAAATTTTTTCG
TCCCTTGAGAATCGAATTAGCTTACATAATATAGAGTCAACTGCATGATG
AAATCGTTATATTAAGCCATGAAACTGCGGCTTCTATTCAATTTTGTTGT
ATATTTTAACGTTACTTTTTTCAAAACTTCAGGTAAGGATCAATCTTGCT
ACGATGACAATCATCCAGGACGATTACACATTTGCGACGAGCGATCGCCA
AGGTTCGCCAGTACCTTTCGCAACAGGTGGTGACTGTTTCTCCGCTAAAC
AAGACGCCAAGTGCAGAAAAGGTTAGAAAGTTTGGATAACAAAAGCGGTC
GGTTTTTAGGAAGTATTGTCGAAAAATTGATACTTTTTCTATTCAGAGGG
GGGGGGTATCTTCTGATTCTATTTTACACAATAGAAATACACAATTCGTG
AAGCGCGGACCTCCATGGCTCGACATAACGATTTCAAGTGGGCTGCTTTT
GCTTGAATTTATGATTTTACGGTCGGACAAGGAACAATTTAGGTAGGAGA
ATGTAATGTCCGATGTTCGACCGATTATTTTAAGCCGTGCGTTTTCAAGT
ATTGTTGCCATTTTGATATCGTTAAAGATGATAAATTTGTTGTGCTTTTG
CTTTAAAATTTATAACTTTTTGGTAAATGTGTAAATTTTGCTCGAAGTAA
TTCTATTATGCAAATAATGCCCGCAATGGCTCTTGAAAAGTTTATTATTA
CTTAACATCTAAGATAACATATACAGTTGAACTCATCTAATTCGAATTCT
CAAGGGACCGAGAATTTTGTTCGAATTACATGAGTTTTTTATGAAAAAGT
CTTTCCCACGTTTACTTTTGAGCTTGATGGACATTAGCGACCGCTTGATT
GGACATACCATCCTCCAAGTCACAGAGAGCTCCATATTTCGTTTTTAAAG
TGACTTCTTTATGTTTTCTTTTTCCCATCTTGTCTTGATAAGAAATGGAA
GGCAAAAAGCAGTGGACGAGCTCGCCAATCGAATGTAATAAAAAAGATAA
CATTCGATTGGCAAACAACGTTGAAAACGTTCGATTGACAAAATGTCGAG
TTTGTCAGCTTCAAAAACTCAAAAAATCCGAAAATTCGAAATACATGATT
AAAATTTCTTGATGGTACTAGAAAATCTGTTTGATTTACATGATTTTTCG
AATTACATGGGTTCGAATTATAGGAGTTTTCTTGTAAGGTTTTCAAGGTA
AATTCTGAGGGGACCACAGAATCTGTTCGAATTAAGTGAGTTTTTGAATT
ATAGGAGTTCGAATTACATGAGTTCAACTGTATTAATAACTTTTTAGGAA
GCTTCAAACTAGACATTAGCAACACTGGCTTCAAGATCAGCAGTAAAGTT
CGTTGGACATTGGAAAGTGATACCAACTCGTTAAAAATACAAGACTACCG
CAACAGTGAAGGTCTTGTGGTGTCCGCTAAGTGTGGTGGCTGGTGTGGCC
ATTGTGTACCTCAACCCAAATTGCAAGTGGAATTACAAAGTTGTAATATT
AAGACTGGTATGTTTTTTCAGATACTTTCTGTTTTACTAAATTCAATTTA
AAGTCTCTCAAGCTGACAGTTCATTTTGAAAAAAAAAGACCAGGATTACT
AAATTCCTATACTATAAGAATGAGAAACCAACAGGAAAAAGAGTGACATG
CGAGTGAAGGTAGAGAGTCTATCACCATATTCCCCTAACAGTCTGCCTGG
ATTCGAACACAGTCTATTACGGTGAAAGTCTGTGATCGAAACCTTCACAC
TATGGCAGAATGTTGGTGAAAAAAAGGTTTGCGATACCCTATTTTGAAGT
AAAAATTTTGCCCCATCCGTTTAATTTCCAAATACATTTACTACTCCCTT
TTATATATTTGACCTTCGTCTTCTCCCATCTTTGTTCAATATTATGTGGA
GATTCTAAACAACTATAACTGTATAAAACTTACTTAAAGAGGAGCTTGAA
ATCTCTCTGGGTTTCGCATTTGATTTAAAAAGTGATTAAACTTTCAAAAA
ACTTTCAATTTTTTTTTCTTTCAGATTCATGTTCAGGCGTGCAATGTCCG
TATTACGGGCAATGCTCTGCCAAAGGGGAGACGTACAAATGTTCATGTCC
AAACAAATGCACCAGAGAAGTGGACCCGGTGTGTGGTAGTGACGGAGTGA
CGTACTCCAATCGGTGTTCCATGAGATATCAATCGTGTGTGGCCAAGAAA
TTCATTGATGTAAAACACCAAGGAAGCTGCGGTAAGTGGATTGTTCTCTT
GCTTATTTTGTTGGTTTTAAGCCAAAGTTGACCACATCTGCGAAGTTCAT
TCTGAAAAAATATGTTTAAGGTTTCAATAAGGGTGGGTTAGAGAATATAA
AGATTTGACCATGGTGCGTTATTGGACCTACCCCGGTGGAGGTCCTATAA
ATTAACCTTTGTCCGTCCGTCCGTTAGTTACCAGCTTTTCTCGAGATTGG
CTCATTAGTTTTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTTTAATAACTTTGGAATTCATGACGTAATCATTTA
TTCGCAAATACCCGAAAACAGCAGTTCTTTTTAACCAACTTTTATTGTTT
AAAAGCTATAAGTAGTGGCAAACGCCTGGAGTTTTGGGGTATTTCCGTAA
AAACGTTTCCGTTTTGAAAATCAAGCATGAGTTAAAAACAATGTTAACCC
TTTAGAGGGAAAAAGAGATTTCGTGACGGAGCTTTGACGTTTATGTTTTA
GAATTATCCTTACCTAACCTGCACCTTGTGAACGAAACGACAATCAAGAA
TTCAATTTTTTTTTTCAGGCTCACAAGATTGCAGCGAGACATTAAAATGT
CTTTTCAACTCCAAATGTCAAACCCAGAATGGAGTTTCTCGTTGCAAATG
TTCCACAGTGTGTTCCAACGACATCGAGTTTGTGTGCGGTTCGAACCTTA
AGACATATCAGAACGAATGCTTCTTGAAGATGGACTCGTGTAAAAACCAA
CGATCGATCAGCGTCAAATATCTCGGTGTTTGCAGTAAGTTGCAATATAT
TTCTATCCTTAATCATGGTGTTTTATTACTTGAAGATTTTCACAAAAGTG
ACGGAATTTTCCCGAAGAAGATTTTAATCTACGAAAACCTTAACCCAAAT
AAATTTTCCCCGTTTATGTTTTGAAATTAAATCAAGAAAGGTTTTTAACT
TAAATGTTATCAAGGAAGATCTTGTTGATTATACTTAGTAGTTGAATAAG
TACCTTCGTTGATTAACGGCATATTCTGTAGCTTTTAAATTATGATATTA
ATGTTCTTACCATTTCATTATGCTTCTATCTTTCATTCAGGGTACAGCCA
TTCACAGATCTTTGATTTCGACATTGCGTTTGCCATCGGTGGAAAATCAA
TCGACCGTCAAGTGTTACTTCAACAGCAAAAACAACTCNTTTTTAATAAC
TTTGGAATTCATGACGTAATCATTTATTCGCAAATACCCGAAAACAGCAG
TTCTTTTTAACCAACTTTTATTGTTTAAAAGCTATAAGTAGTGGCAAACG
CCTGGAGTTTTGGGGTATTTCCGTAAAAACGTTTCCGTTTTGAAAATCAA
GCATGAGTTAAAAACAATGTTAACCCTTTAGAGGGAAAAAGAGATTTCGT
GACGGAGCTTTGACGTTTATGTTTTAGAATTATCCTTACCTAACCTGCAC
CTTGTGAACGAAACGACAATCAAGAATTCAATTTTTTTTTTCAGGCTCAC
AAGATTGCAGCGAGACATTAAAATGTCTTTTCAACTCCAAATGTCAAACC
CAGAATGGAGTTTCTCGTTGCAAATGTTCCACAGTGTGTTCCAACGACAT
CGAGTTTGTGTGCGGTTCGAACCTTAAGACATATCAGAACGAATGCTTCT
TGAAGATGGACTCGTGTAAAAACCAACGATCGATCAGCGTCAAATATCTC
GGTGTTTGCAGTAAGTTGCAATATATTTCTATCCTTAATCATGGTGTTTT
ATTACTTGAAGATTTTCACAAAAGTGACGGAATTTTCCCGAAGAAGATTT
TAATCTACGAAAACCTTAACCCAAATAAATTTTCCCCGTTTATGTTTTGA
AATTAAATCAAGAAAGGTTTTTAACTTAAATGTTATCAAGGAAGATCTTG
TTGATTATACTTAGTAGTTGAATAAGTACCTTCGTTGATTAACGGCATAT
TCTGTAGCTTTTAAATTATGATATTAATGTTCTTACCATTTCATTATGCT
TCTATCTTTCATTCAGGGTACAGCCATTCACAGATCTTTGATTTCGACAT
TGCGTTTGCCATCGGTGGAAAATCAATCGACCGTCAAGTGTTACTTCAAC
AGCAAAAACAACTCATGTCTTATTTCCTAGACTCGTTTCGTTTTCCCATT
GAGCAAAACGGAATCAGGCTAGCTTTCCTCACCTATGACGATAGTGTGAA
GATTGTTAAAAATCTCGACCAGAATTTCGTTCTTCCATACGTTCGACGTT
ATCTTGATGAAATGACTTTGGGTGGAGACTCCTCAAAGATTGAAAGATCT
CTCCAAGGAGCAACCAGTTCTATTTTCACCAGAGCGCGTCCTGGTGTTCA
AAAAATCCTTGTCGTTTTTGCTGATGATAGTTCAGATTCTGACTTGAACG
CTATAAGACAAGCAAAAGAACGACTAGCAGATCAAGGCGTTCAAGTGATA
TTGATCTCTTCTGGCAATCGAATGTCCATGTCAATTGCAGCAGCGATCGC
AAGCAGCGGAGATAATTTGATCACTGGGCTGACCTCCAAAAACTTTTTAC
AAAGCTATCAACAGTTCATTGATATCGTTATTAATGGTAAATTTTTTCTT
TTCAAAATGTCGCATCAGTTAGTCATTATGTTCTTATAGTTTTTGGTTTA
ACAGATCATTGAACTATTGATGCTTCATATGCCCCAAACACGCACTCAAT
GAAACATCCACTACGTTACTTTGAAGGAATGGCCGTTTTTGATTCATTAA
ATCATTTTTCAGTTAATTAGTTTGTTTGTTATTTTTCTCCTTAGGTCGAT
GTTCTTTCTTGAAATGTCAATCACCAGAAACGTGCCAGAGCCTCGACATG
ACCAACATCAAATGTGGATGCAACGTGAATTGTCAAAACGCTCTCCAGCC
TGTCTGTTCGTCCACTGGTGTCTCGTATGGAAACCTTTGTTTGATGAAAC
AAGATGCTTGCGTTAACAAGAAGAATATTTTCAAGATCAACGATGGCTTT
TGCAGTAAGTTTTTGCAAACACCAGTACCAGATTCAATTGAGCGTTTTAA
ATCTTCTTTTCTTTGCCCCTCCTCTGTAATACACGTCGTCGAATGTATTC
TGATGGTCGAATGATTACCTAGATTAAGAAGGGAGTATTTCCCTCTTGTT
GTCTTTCTATTACAAACGAAGTCATGCGACAATGGTTAGGTCGTTAAGAT
GGAATTCAAAGCTTTCGTTCAGTAGATTCTCCATAACTCGAACACGCATG
GGGAACACAAAATTGTTCGAGTTATCTATATAGAAATTTTAATTTGTGGA
GTAAGCTTTATAAGGATTAAGGACCTGTTCCAATCAAGGAGACATTCAAA
TTATAGAGGTTGGAGTTAAAGAGTTCTATATACTATATATAAATTCCTTT
AGAAATTAACAAACCAATGGATGTCTTGGTCACCTTCGATACCTCCAACC
AAATGACGTCACAAGACTACGATCGTGTCAAGACATTCTTACGAAACGTC
GGGAAGTCGTATGACGTCGGTAAAGATAAGGCAAGGATCGGGCTCATCAA
TTTCGGCTCACGTCAAAAAGTAGTGTTGGATCTGAATGAAGGAATCAGTG
AAAAGCGAATCGAAGATGCCGTCCAGAAAGTTACAAATATCGGTAAGAGA
ACCTTCTTGAGAGTCTCAAGGTTATTTATTCTTTCTTAGTTGGAAAGGCA
ACTTAAACTCTTTAATTTTGGTGTAGAAAATTTGAAAATGTCGGTCTTTT
AAAAGATGAGGGTATCTTTCAAGAAACACTTACTAATAATATTAGATTAA
TCACGATCCGCTCAGCTATAACTAGCGTTTATATCTTTCTTTCTTTCCAT
CATTCTGCGAGACTCGTCCGTCTTTCAATCTGTGTGGCAAGATTGATAAT
TTCAAAATATCACAGGTAATGTGTATTTCTTCTACCATAATGCTATTTTA
TCTCGATTCTCCTTTATATAGGTGGCAATCGTGACATTCCAAGAGCAATT
CGATTCAGTATCAATCATTTCAGTCAATACCGCAGAGATTCAGTCCCTAA
AGAGTTCATTTTCATTACAAGCAAAACAGATGTCGCAAACTCTGGTGTGT
TGGAGAGATTGTTCACATCGTTCAGTCAGAACAATATCAAGCTGAAGTTC
GGTATACTTGGTAAACCAACCACTCGATTTGTGGACTTCTTGACAAAAGG
ACGGAGCTCTGATCAACTTGTCTCCATTGACGATGATGATGAATCCATCT
TTAAATTCTTTAAACTTTTAAAACCAACCGTCACTGTTGAAGGTACGTAT
ATCTACCCAATTAAATTTTTGTAACATACTTTTTGTATGTTTGACTTGAT
TTAATCACAGAGGTTTAACTTTGAATATTATCTGCGATCCAATGTAAAAC
ATTTACTCTTTGCTGAGATCTTTTTGTGACGATCTAGTTTTTTAGATATT
TCATTTAGAACTGTTAGAACACCACTCTTTAGAACATCATTTTTTCTATG
ACATCTTTAGACAAAATGGACGTCGGCTTCATCTTGACTGGAGATAAAAA
CACATTCCCAAAACAAAGAGATTCCGTTGTTGAGATCATCCGTAGGCTTC
GGATGCAACCAGGAAGTCCGGACATGTCCAATAAAGTTGGGTTCATCGAC
CAAGAAAGGTTTTTTCCACTCACCACTGATAAATCATACATCATAAGAAA
TTTACAAAACTCAAAACCAATATCAGACCCAGATCTCAAGAACCAGTTCG
AGAGAAGCGTACAATTCTTCACACAACAAAATGGTGGACGAAGCAGTGTA
CCTAAAGTCTTATTCGCTTTTGTTGATGATTTGATTTTGAATTATGATGC
TAATAGTATTGCCTCCTCACTGAAGCGACTTTTAGACCAAGGAGTGAAGG
TTGTCTTGTTGCAGAGTGAAAGTAGTTATAGTTTACAGGTCTTACCAACG
TTCATCAAAGATCGATTGGATCGTGTAGATATCAACATTGATGATTTGAG
TGATATCTTGGAGAAAATCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037917XLOC_037917Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060281-exon-scaffold_339-1575043694:380343..380851TCONS_00060281-exon-scaffold_339-1575043694:380343..380851Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:379797..380063TCONS_00060281-exon-scaffold_339-1575043694:379797..380063Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:379035..379312TCONS_00060281-exon-scaffold_339-1575043694:379035..379312Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:378581..378719TCONS_00060281-exon-scaffold_339-1575043694:378581..378719Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:377345..377554TCONS_00060281-exon-scaffold_339-1575043694:377345..377554Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:376621..376827TCONS_00060281-exon-scaffold_339-1575043694:376621..376827Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:372492..372707TCONS_00060281-exon-scaffold_339-1575043694:372492..372707Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:371616..372185TCONS_00060281-exon-scaffold_339-1575043694:371616..372185Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:371198..371407TCONS_00060281-exon-scaffold_339-1575043694:371198..371407Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:370560..370799TCONS_00060281-exon-scaffold_339-1575043694:370560..370799Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:369910..370230TCONS_00060281-exon-scaffold_339-1575043694:369910..370230Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1575043694:369181..369691TCONS_00060281-exon-scaffold_339-1575043694:369181..369691Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:380343..380851TCONS_00060281-exon-scaffold_339-1510915933:380343..380851Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:379797..380063TCONS_00060281-exon-scaffold_339-1510915933:379797..380063Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:379035..379312TCONS_00060281-exon-scaffold_339-1510915933:379035..379312Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:378581..378719TCONS_00060281-exon-scaffold_339-1510915933:378581..378719Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:377345..377554TCONS_00060281-exon-scaffold_339-1510915933:377345..377554Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:376621..376827TCONS_00060281-exon-scaffold_339-1510915933:376621..376827Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:372492..372707TCONS_00060281-exon-scaffold_339-1510915933:372492..372707Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:371616..372185TCONS_00060281-exon-scaffold_339-1510915933:371616..372185Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:371198..371407TCONS_00060281-exon-scaffold_339-1510915933:371198..371407Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:370560..370799TCONS_00060281-exon-scaffold_339-1510915933:370560..370799Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:369910..370230TCONS_00060281-exon-scaffold_339-1510915933:369910..370230Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1510915933:369181..369691TCONS_00060281-exon-scaffold_339-1510915933:369181..369691Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:380343..380851TCONS_00060281-exon-scaffold_339-1491911889:380343..380851Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:379797..380063TCONS_00060281-exon-scaffold_339-1491911889:379797..380063Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:379035..379312TCONS_00060281-exon-scaffold_339-1491911889:379035..379312Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:378581..378719TCONS_00060281-exon-scaffold_339-1491911889:378581..378719Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:377345..377554TCONS_00060281-exon-scaffold_339-1491911889:377345..377554Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:376621..376827TCONS_00060281-exon-scaffold_339-1491911889:376621..376827Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:372492..372707TCONS_00060281-exon-scaffold_339-1491911889:372492..372707Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:371616..372185TCONS_00060281-exon-scaffold_339-1491911889:371616..372185Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:371198..371407TCONS_00060281-exon-scaffold_339-1491911889:371198..371407Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:370560..370799TCONS_00060281-exon-scaffold_339-1491911889:370560..370799Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:369910..370230TCONS_00060281-exon-scaffold_339-1491911889:369910..370230Clytia hemisphaericaexon
TCONS_00060281-exon-scaffold_339-1491911889:369181..369691TCONS_00060281-exon-scaffold_339-1491911889:369181..369691Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:369181..380851 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.00566443	0.0068959	0.00544923	0.0328713	0.0615475	0.0258545	0.0480374	0.0207228	0.0374615	0.0408103	0.102423	0	0	0.053742	0.0393456	0.0761013	0.12514	0.2917	0.09405	0.00586308	0.0053304	0.214117	0.137196	0	0.0224492	0	0.00578257
Blast
[Close]
BLAST of TCONS_00060281 vs. Swiss-Prot (Human)
Match: ATS9 (A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens GN=ADAMTS9 PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 8.588e-28
Identity = 71/209 (33.97%), Postives = 114/209 (54.55%), Query Frame = 2 
Query:  782 RNCKDLKKKGYAKTDGHYFLHPTPKCDKAIKVYCYDMDSPEPKDFITLPSGPEHNMAYIYEKRM--------DLSKKFECEGPVGPIVYSKSGRTHFSKVRINLATMTIIQDDYTFATSDRQGSPVPFATGGDCFSAKQDAKCRKGSFKLDISNTGFKISSKVRWTLESDTNSLKIQDYRNSEGLVVSAKCGGWCGHCVPQPKLQVELQ 1384
            +NCK++K+   A  DG YFL       K +K++C  M S  PK+++TL  G   N + +Y  R+        + S++ +C+       Y+ +G + F K+RI+L +M II  D  FA +  +G PVPFAT GDC+SA   AKC +G F +++  TG  ++   RW  + +     I+  ++ +G  V  KCGG+CG C P     +E++
Sbjct: 1737 QNCKEVKRLKGASEDGEYFLMIR---GKLLKIFCAGMHSDHPKEYVTLVHGDSENFSEVYGHRLHNPTECPYNGSRRDDCQCRKD---YTAAGFSSFQKIRIDLTSMQIITTDLQFARTS-EGHPVPFATAGDCYSA---AKCPQGRFSINLYGTGLSLTESARWISQGNYAVSDIK--KSPDGTRVVGKCGGYCGKCTPSSGTGLEVR 1933
The following BLAST results are available for this feature:
BLAST of TCONS_00060281 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATS98.588e-2833.97A disintegrin and metalloproteinase with thrombosp... [more]
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