TCONS_00060266 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060266
Unique NameTCONS_00060266
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060266 ID=TCONS_00060266|Name=TCONS_00060266|organism=Clytia hemisphaerica|type=transcript|length=1310bp
taGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAACCCT
TCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCAT
CACTGGACAAGAGGCTATCATACAAgagCTGAAAGAAGGCTATTCGCAAG
AAGCTTTTGAAAGAGCATTGTTGACATTTGGTTTATCTGAAGAAAATTAC
GAAGCATCTGAAAAACGTTTGAAGAAGCTGAGagaggaagaagaaaaatt
gtGCGAAGAACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAG
AGCGAGAGGAATTCGAAAAGGAGCGTGTTGAATTTTATATGCATTGTATA
TCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGGAAT
CTCAACCAAGCATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCCCGCAC
CTTCAATTTTTGCATCATCTAAGAAGGAGAGATTACCAACTTCAAAACAA
ATGCCCTCCACCGCAGAACTGTACCGTTTCATGTCATTGAATTACGATGG
ATCTGTGTCAAGGAATCTTGATCGaAATTTGAACGGTTCATTCGTCCAAG
CAGATACCTCACCTGATGGTTCACCCTCTCCCAAAAAGTTACACGAGCAC
GCGGAAAATATTCGTCGCGCGGTCGAAGAGCATCACAATAAAAGTATTGA
AGAGAGTGTCACTGAACTGCAAAAAACTCCTAGATCGCACACAAGTTCCA
ACACTGGATTTAGTGGTGGCGAAATTCCGTTCTATTTAATGGAGTAGGTA
CTGATGATCACGTATGGTTTATAGTCAAATAAATCTCAATGGGTTGTTGC
TGAGCAACGGGAGAGCACTTTCATTTGTCATATATTTGATATGACCAAGA
ATGAATGCAGAGTCAAACATTGGATTGAAAAGGGAATGGTTTCAATCAGT
ACATCGGGATTTCTGTCATTTGCTTCACTGGAAAGAAATCAATTCTcata
ttaacttatttattcatTCGAGGAGGATACGAAAAAGTCTTCTTCCAGAA
GATTCGATTATACAACCATGCGCCTAAGGATGCATGAAAGAGGAGTGGAA
CCGAGTTTATCAGGGTcgaatgacgtcaatttttagaATTCAATATGATG
AAGAACTTGCAGgcaataaagatatttcatgCCATTCGACTCTGGTCAAG
TAGATGCTCTGGTTGTGATAGGGTTGGTGTCATACGTATCGAATTgccaa
attcatgatatgcaccactgcaatgacttcacgaaattatgcaactttct
gttttttgtt
Run BLAST on NCBI

transcript from alignment at scaffold_339:174887..186360-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060266 ID=TCONS_00060266|Name=TCONS_00060266|organism=Clytia hemisphaerica|type=transcript|length=11474bp|location=Sequence derived from alignment at scaffold_339:174887..186360- (Clytia hemisphaerica)
TAGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAACCCT
TCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCAT
CACTGGACAAGAGGCTATCATACAAGTAGGTTCCAAACCTCTCCGTTCAA
ATTAGGTGTATTATAAATTCAATTCGATTTTCGGAGGGAAACATATTTTC
ATTGAATAAGGGTTCGAATAGTAGAGTGTATTGAATTGTAGAGAGTCGTT
TATGATAGTTTCTTGTTGACGGCGACATCATTATTGAATCGAATATTAGA
CTTCGGTCGATTTAGAAAGGGTCAAATGTATTTGAAATTTGGAAAGTCGC
CGAATCCAATCCTCAGGTGCGAAGAGGGAAAAATGGCTCAACATTTGTTG
CTTTCTTTTTATTTTGTAGGAGCTGAAAGAAGGCTATTCGCAAGAAGCTT
TTGAAAGAGCATTGTTGGTAAGTCTCTTAACAGATCTCATTCACTTTCCA
TGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCT
CATTCACTTTTCATGCCCCTTTGAAACTGTTGTAAAATCAATTGTAAGTC
TCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTATTAAAA
TCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCCTTTG
AAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTT
TCATGCCCCTTTGAAACCGTATTAAAATCAATTGTAAGTCTCTTAACAGA
TCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAA
GTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTA
AAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTT
TGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACT
TTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACA
GATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGT
AAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTG
TAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCC
TTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCA
CTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAA
CAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATT
GTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGT
TGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCC
CCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATT
CACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTT
AACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAA
TTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACC
GTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATG
CCCCTTTGAAACCGTTGTAAAATTAATTGTAAGTCTCTTCACAGATCTCA
TTCACTTTTCATGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCTC
TTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATT
AATTGCAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCATTGAAA
CCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCA
TGCCCCATTGAAACCGTAATAAAATCAATTGTAAGTCTCTTAACAGATCT
CATTCACTTTTCGTGCCCCATTGAAACCGTAGTAAAATTAATTGTAAGTC
TCTTAACAGATCTCATTCACTTTTCATGCCCCATTGAAACCGTAGTAAAA
TCAATTGTAAGTCTCTTAACGATCTCATTCACTTTTCATGCCCCATTGAA
ACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTC
ATGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCCCTTAACAGATC
TCATTTACTTTTCATGCCCCATTGAAACCGTAGTAAAATCAATTGTAAGT
CTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAA
ATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTG
AAATCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTT
TCATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAATCCCTTAAAAGA
TCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAA
GTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACATTAGTA
AAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTT
TGAAACCGTTGTAAAATCAATTGTAAGTCTCTTCACAGATCTCATTCACT
TTTTCATGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCTCTTAAC
AGATATCATTCACTTTTCCATGCCCCATTGAAACCGTAGTAAAATCAATT
GTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGT
AGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCC
CCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATT
CACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTT
AACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAA
TTGTAAGTCTCTTAACAGACCTCATTCACTTTTCATGCCCCATTGAAACC
GTAGTAAAATCAATTGTAAGTCTCTTAACAGATATCATTCACTTTTCCAT
GCCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTC
ATTCACTTTTCATGCCCCATTGAAACCGTAGTAAAATCAATTGTAAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGATGTTTACTTCTACAGATTTGAGGAAAATTATACAAATCTTTTTATGA
ATCGTTGGAAAATGAGCACTTTCAAATGAATGTGACTAATAGCTTAAAAA
TATTCTCCTAATCCATTATGCTCTTCTCTACTCTCTAAGAATATTCAATA
AAAAGTTCAATAATCGTTTTTGCTCGGGAAAGTTTGTCTGCCTTAAAAGC
ATTAGTTCGATTCGCAAACCTCTATAGATATATCTCCTGTATAGGTTTGC
TTAATAGTGTACGGCTTGCCTTCCCGCTATGGTGGCTCTTATGGTGGCCG
ATTTTACCTTTTTTGGCGAGTTCACTCGAATTATCGAGTTTGCATGGGGA
ACGGAAGTCGATGTGATGTGATATGAACTTTCACTTTTGAAAAACAAAAT
ATGCAAAATGGCGGATGAGAGTGGCAGTAAAAATCGTGGGGCTCATTGTG
AAGATAAATGTTACCTGTGTCATAAAGTATCGAAGAACAAACATGACAAG
AACATCCTCAGTGAAAAAAGAATCAATATCATTAATCAAAACAAATATTT
TCACCTGGCAGCAAGCTCCTTAAACAAGCTAAACCTGTGTCAACGATGCT
GCAGGGACATCGCACAGCTAGAGAAGAATTATAATTTTGAAAAGGGCCTA
TTAGAAAAGATTCCAGAACATCATAAAGTTAATGTAAGTTAACTGTTAGT
TCATTTTTCCAATGCAGAACTGTTTTGAGGTATTTAGTCCAGGCTATAAA
ATCATGATTTTTTCATCATTTAACTATCACACTATATTTGGTATATCCCA
GCAGGGTCAAGCGCTGTGTCCAGACGATCTCAATCGAACGGAATCGACGA
TCGAACCAGTGGAACCAAATCGAATGCAATCGACCGATTGAAATTCGATT
GTATCTCAATCGAATATTACCGCAATTTTCAGATTCGATTGATATTCAAT
TGCGTTCGATTGATGTTCGATTGCGTTCGATCGTCGATTCATTGACCCCC
GGATTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCGAAAGTAATTTCATTCGGCTTGTGATGTTTGAGAGCTTGGAT
GTTGGAAAGCTGCAAGAATAAAGCCAGACAATCTCAATCGAACGGAATTG
ACGATCGAAACAGTCGAACAACGATCGAACCAATCGAATATTACCCAGAA
TTTGTTCGATTGAGATTCGATTGCGTTCAACAATCCAATTTCAATTGGTC
GATTGCGTTCAATTTGGTTTGACTGGTTCGATCGTCGATTCCGTTCGATT
GAGATCGTCTGGCTGTGTCAGGCTCGATTATAGGATCAATTATCAGAACA
GATTGATAAAGAATCAGTATTTGATTGATGAATTACTTATAAAATTTCGA
TAAGTGATAAAGCAGGGATTTGATACCCAAGATTTTTTAGCCTATGATCA
TTTTATTGTTGTTCATTTATCCCTTGCTGGTCTATCCCCCATCAATTGAT
CGATAAAAAAATTGATTTTTTGGAAAGATATTTTTGTTCTTGAAATTTTT
AATCTGATATATAACACCGAATTGATAGCTGGTTCGAGACCGGCCTCTTT
TTTAAAAGAAGAGAAGCTACTGGAGCATCTAACTGGTGTTAATGTCAGTC
ACTGTCACTAACCTGAATAAAAAATGTTCATATCCATTTAGTAAAAATTG
AATTAAAAACTTTATTTTTTAAATTTTAGCGTCAACCAGTCCCCTTGCTT
GAAGAAACTAAAACGTCAACAATTGGAACGCAAACCGAAACAAAAATAAT
TTGCATCCCAGAAACAACAGAAAAAGAAACTAGATCTTTTGTATATATAA
GTTGGCCAAGCTGTACTAGATTTGCTGAAGTAAGGAGTTTACTATTTTGT
AACATAGAAAGCATCTCTGATTTTTCTACTCGTTACAGTACAGAAATTTA
TCATAAAACGAAATTGTTAATGCTGGTTAATGTCCAGTTTTTAAAACTAA
TATTCTAAGAGAGCAAAAATAGAAAAATAGATACCAGTTCTTATGACTCA
TGGCATATGTATAATGATATTTCTTTGTTTTTAGAACAACCTCTGAATCA
TCATAGAATATTATAATTACAATAGTATTCTACCATCTTTTTTAGCTACC
CAAATCCTTAAATCCAATCTGCTTAAGATTACTACGTCAGGACTATAAAA
GCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AAGCAATGTATGAGAAAGTGCCGTCTGACGGATCGAAATGATGTTTTCGG
TACCGTAGAAAACGCACATCAAGTTTTCCTTGGCGCTCCCCAGGTATATA
GAATCCAAAGGTACATGCACACGATAGCAAAACTGCTTCGCTCATGTATA
TTCGCTTCGCAAAAAGATTGCAAAGAAGTTTTCGAATAAATTCACTTAAT
AGAATGTCTTCATTTAAAAATAGAAGCACTCGATTTCATTCAAAAAGAAA
AAGACATTCTTTTTTTTATGTAAGTCTTTTTTAAGTGTTGTTGAACATTA
TAGTAAATTATATTCACTTTTTTGAATATATTTTTTGGAATAAAGTCACT
TTTGGTTTTTGTTATGAACCAGCACTCCTAAATACTCCTCCGTATGGATG
TTTGTGCCAATGCTAGATCAGCATTTCATAAATATACCATGCGTCGTTCC
CTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTCGAAAAAAAAAAATTTTCCGGCCGAAAATGCCGGAAATATG
CCAGAAAAACCGGTTTTTTGACATTTTCTCGAGATTTCATCATTATTTTT
TTCTGATTTTTTGCTTAAAGATGCGTATTAACAATGCCCAGAACATGGCC
GGGTCCGATTTTTGAGAAAAAATTTTTTCCGGCCGAAAATGTGGGAAATA
TGCCGGAAATCACCGTTTTTCTGAATTTTCATTAGACTTTTTCCTTATAA
TTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAAATGCCCACCATC
AAGCATGTTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACTATTA
AAAAATCGCCGGAACAACCTATATTCGCTGGAAAGACAGTATTTCTTGAA
TTTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGATGC
AAAATGACAATACCTAAAATGTGACAGAGTCCAATTTTAGAAAAACATTT
TTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGAC
ATTTTCTCGAATTTTCATCTTTAGTTTTTTCTGATTTTTTACAGAATTCG
CAATGCTCAAAACATGACAGAGCTCGATTTTTTGAGAACATTTTTTTTCC
GGCCAAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTGCAGATTTAA
ATTGGGCTTTTTCCTAACATTTCTTTGTTTTTTCTCCAAAAAAAACATCA
TTGATAGCAATTCCCACCATCAATCATGATTCGATTGTCAATAAAACTGA
TTTCTGCAACCGGAACTTTCTATATCTTTTTTCCCTTCTCCCTTTCCCTC
TCCCCATCAAGAATCAATGATGAAATTTAACGCATTTTGCCTTTTCGCTA
AAAATTATATTTTCTAACGGATTGTTTCCGTTTTTTTCCTTAATGCTATC
TAACTTTCATCATCAGGTAGGTTGAAAAACGAATCTTTATCTTATAAGAA
TCACTATATATAAGCATAGATCAATATTATTATTTTTCTAAAAGAAGAAA
ATGTCACGGTAGAGCGCGATGGTTTGAGTTTTCTAGAAACCTTTTTTATT
AAAGCTGTGCGTTTTTCTGATAGTGTATTGTTTTTATAAAGAAAAGCGTT
TAATAACCTTTTTAAGTCTTTTTCAATAGTGTTGATAGTTTCTCCCAATA
GATATGCTTTCATTATATATGTGTTTCATTGTTTCAATGTTCATTGATTA
GTTTTGGTAACCAGGTAGGTCCATAAAAGTATCACTTGTTTTTTTGTTTT
TTTCTTCAAAAATGTATATTGGGTTTTTTGTTACAGATTGTCATGGTTAG
TCGCTAGTTTTTAGCTTCTCCAGTGTATATAACTTCACTTTACTTCTTTT
ATTTCTTACCTACAGACATTTGGTTTATCTGAAGAAAATTACGAAGCATC
TGAAAAACGTTTGAAGAAGCTGAGAGAGGAAGAAGAAAAATTGTGCGAAG
AACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAGAGGTACGT
GGGTGGGTGGGTGTGGGTGGTTGTGGGTGTAGGCTCATATTTCTAAGTTC
TTTCAAGCTAGTAAATTTAGCGTGCATAAAATTTTCGTGAATGGATTTAA
ATGTCTGCGAAAAAGAGGTTAATTCGTGAAAATAATTGAAATTGAAAATT
TTTGATGCAGCAAAAAATCTATTCCCGCGAGATAAACTTTTTCTGACGAG
TTTTAAACTATATTCCATCAATAAAAAAGCGAAATTTCGGGAATCCACAG
ACCCACGAAATTAACAGGGCTCCCACAGCTCCTCTAATCTCCTCAATTCT
CCTTAAATTTCAAATGTCTCCTAAAATCTCCTACTTTTTCTCGAATTTCT
CCAATATTTTCTTCAAATCTCCTCAATTAAGTTTGACCAAAAATAAAAAA
CGTTCAACGTAGTATCGCTGGCCCTCTAGATGTTTCGAAAATTGATTATC
AAGAATAAAATGAAAAATTTTTTGCTCGCTTCGCTCTCACATTTCTTTAC
TCTAATATCATGTTTCCATTTCCTCATTGCTCTTCAATAACTCGAAATTA
GTGACGTTCTGCTAAGGACAGGGGGCCACGACCCCACAACAGAGTTTTTT
TAAAAGGGCGAAATCAATTACGAAGTAAAAGTTTAGAAACTCTGGGGGTG
GGGGTGTTATTTAAAAAATAGACTATTGCCGCTATTGGTTCATGCTGTTA
TAACATGTCTACATTTAAAAATGTTTTCAGGTTTTTGTAGTTTTACACTT
AGAGCCACTGCTCCCCTCTAAGGATAATTACCTATCCCCCCCCCCCAGAA
GGAGACTTTGGTAAACCTTTCCTTTGTTTAATTCGTAAAAAGTTCATTTT
TACAATAAAGGAGACAATCTCAAAAGATTTTTGTGCTTCTTTAAAGGTCA
TTTTCAGGAAGAGCCACGCCCCTATGGCATGTGTGGATCATGCCGATGTA
AAACATTATCCAATTTTTTTATTGGACAGTGCAGTGTTGCTTTTTTAACA
ACAAAAAGTATCATTTTAACTTGGAAAGAAAATCTCCTCAATTTTTCTAA
AAATATATGAAAAACTCCTCAAATTTTTACAGAAATCTCCTCAAAAAAGT
GGAAAATCCTCCTTAATTCTCCTCAATTCGCCTTAAATTTGAAATTTTGA
AAGCTGTGGGAACCCTGATTAATCAGGATTTGTAACAGTTAAATCCTATT
AGCCCCAACAAAAATCGAAAAAGCTTAAAAGGGGTTAAAGTATTCTGATT
TTATTTCTCAAAACCATGTTTGATCTTTTCTTTCCAGCGAGAGGAATTCG
AAAAGGAGCGTGTTGAATTTTATATGCATTGTATATCCACGCCCGTCCTT
AACAAAGATAAGAAATTAAACCCAAGAAGTGGTAAGTTTTATATGCATTG
TATATCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTG
GTGAGTTTAACCATCATTGGTTGTACATGACCGAAATCTTAAGGGGCGTA
CGGGGTTTGCTAATTCCGAAATACCGAATGATTTTGCTAAAATTTCCGAA
ATTCCGTAAAAAGATACTTGCAATTCCGATACCGACTTTTTTGGGTATAT
TTCCTTGTTTTGACTAATTTTTCATCAAATTTGTTTTTCATGTATAAATT
CCGAAAAAGGGGGATAAAAACTTTATAATACCGAAATTCCGAAGCAAAAA
TTCCTGGATTTCCAATACCGAAGCAATTTCAGCATTCCGAAATACCGAAG
GAATTTTGCCCGATTTTCGAAATTCTGAAGAGAAAAGGCTCGATTTCCGC
AATTCCAAAATACCGTACGCCCCCACCTTGAGGTTTTGCTCAAATCTCGA
ACTTGTCGCAAAATTCGACGTCCCTTGATAGAGGATGACTTATAAATTTA
TTGTTCTCGTTCTTGTTTTTAACTTTATTTTGATTTAATTCATATTCATT
TATTACAGTAGCCCCTGGCGGAGACAATGGCTGAGCTGCTTAAAAAATGC
CACTCAAAATATTAGTTATTGTTATTGTTGTTATAGGAATCTCAACCAAG
CATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCCCGCACCTTCAATTTT
TGCATCATCTAAGAAGGAGAGATTACCAACTTCAAAACAAATGCCCTCCA
CCGCAGAACTGTACCGTTTCATGTCATTGAATTACGATGGATCTGTGTCA
AGGAATCTTGATCGGTAATTACCTTATCGGCCAAAACTTAGTCGGTCCTA
AGTGGCGAAATTTTGGCTTGGTGACTAAAATTAGGGCCGGCTAAAAATTA
GGGCCGACTAAAAATTTGGGCCAAATTAAAAGTTTATAATTAAGCTTTCC
TCAACCAACTTTTTTGAGTACCACATCATGGTAATTTATTATTTCGTCCG
CTATTATTCATTATATATTAGTCGGCGCTAGTGACTAAATTTAGACGAGG
TGACTAAAATTAGGGCCGAACGAAAAATGTTATGTTGATACATCACGCTG
AAAAAAAAAGTGGTCACGTCTAGTATAGGCTAGCTTTTTGTTTTAGATAT
TGATGTCGAAGCCAGAGCCCACGCCATGAAATTGAAAGTGGAGGCCAATG
AACAAAGAGTCTATAAATAGGCGCAACCAAAAGATTCTACTTCTAAAAAA
AGTGGGCCCTGGAAACTCAATTGTCTTTTCTTCTTTCTAGAAATTTGAAC
GGTTCATTCGTCCAAGCAGATACCTCACCTGATGGTTCACCCTCTCCCAA
AAAGTTACACGAGCACGCGGAAAATATTCGTCGCGCGGTCGAAGAGCATC
ACAATAAAAGTATTGAAGAGAGTGTCACTGAACTGCAAAAAACTCCTAGA
TCGCACACAAGTTCCAACACTGGATTTAGTGGTGGCGAAATTCCGTTCTA
TTTAATGGAGTAGGTACTGATGATCACGTATGGTTTATAGTCAAATAAAT
CTCAATGGGTTGTTGCTGAGCAACGGGAGAGCACTTTCATTTGTCATATA
TTTGATATGACCAAGAATGAATGCAGAGTCAAACATTGGATTGAAAAGGG
AATGGTTTCAATCAGTACATCGGGATTTCTGTCATTTGCTTCACTGGAAA
GAAATCAATTCTCATATTAACTTATTTATTCATTCGAGGAGGATACGAAA
AAGTCTTCTTCCAGAAGATTCGATTATACAACCATGCGCCTAAGGATGCA
TGAAAGAGGAGTGGAACCGAGTTTATCAGGGTCGAATGACGTCAATTTTT
AGAATTCAATATGATGAAGAACTTGCAGGCAGCATGAACATATAAACCAA
AGGATGCATAAAAGAGGATTGGGTCCGAGTTTATAAGGGTCGAATGACGT
CAATTTTTGTAATGAAGAACTTGCAGGCAATAAAGATATTTCATGCCATT
CGACTCTGGTCAAGTAGATGCTCTGGTTGTGATAGGGTTGGTGTCATACG
TATCGAATTGCCAAATTCATGATATGCACCACTGCAATGACTTCACGAAA
TTATGCAACTTTCTGTTTTTTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037908XLOC_037908Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060266-exon-scaffold_339-1575043694:186236..186360TCONS_00060266-exon-scaffold_339-1575043694:186236..186360Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:185894..185941TCONS_00060266-exon-scaffold_339-1575043694:185894..185941Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:178417..178545TCONS_00060266-exon-scaffold_339-1575043694:178417..178545Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:177030..177123TCONS_00060266-exon-scaffold_339-1575043694:177030..177123Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:176197..176374TCONS_00060266-exon-scaffold_339-1575043694:176197..176374Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:175133..175720TCONS_00060266-exon-scaffold_339-1575043694:175133..175720Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1575043694:174887..175034TCONS_00060266-exon-scaffold_339-1575043694:174887..175034Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:186236..186360TCONS_00060266-exon-scaffold_339-1510915933:186236..186360Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:185894..185941TCONS_00060266-exon-scaffold_339-1510915933:185894..185941Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:178417..178545TCONS_00060266-exon-scaffold_339-1510915933:178417..178545Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:177030..177123TCONS_00060266-exon-scaffold_339-1510915933:177030..177123Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:176197..176374TCONS_00060266-exon-scaffold_339-1510915933:176197..176374Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:175133..175720TCONS_00060266-exon-scaffold_339-1510915933:175133..175720Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1510915933:174887..175034TCONS_00060266-exon-scaffold_339-1510915933:174887..175034Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:186236..186360TCONS_00060266-exon-scaffold_339-1491911889:186236..186360Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:185894..185941TCONS_00060266-exon-scaffold_339-1491911889:185894..185941Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:178417..178545TCONS_00060266-exon-scaffold_339-1491911889:178417..178545Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:177030..177123TCONS_00060266-exon-scaffold_339-1491911889:177030..177123Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:176197..176374TCONS_00060266-exon-scaffold_339-1491911889:176197..176374Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:175133..175720TCONS_00060266-exon-scaffold_339-1491911889:175133..175720Clytia hemisphaericaexon
TCONS_00060266-exon-scaffold_339-1491911889:174887..175034TCONS_00060266-exon-scaffold_339-1491911889:174887..175034Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:174887..186360 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.2229	17.6674	44.2326	47.7889	5.95076	1.41112	0.173338	3.58072	5.84463	6.09781	5.24235	3.9537	6.48579	4.23339	6.02606	7.73374	15.8714	11.4118	7.22989	11.5848	16.8742	17.5824	16.6554	17.9576	1.33337e-05	4.77889	3.92434	4.46936	8.65611	11.3452
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060266 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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