TCONS_00060240 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060240
Unique NameTCONS_00060240
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1409

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060240 ID=TCONS_00060240|Name=TCONS_00060240|organism=Clytia hemisphaerica|type=transcript|length=1409bp
ctAGATTCTCTTAAAGGTATCTATTAGCATCTATTTGAGAGTGGacacag
aaaaaatttaaaatgacaGATGATGGCATTGTGGCACATTTTAAAGAACT
TCAGCAAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCA
GAAGGAAAGATTTAGAATCAAAACAAGGCTCAGtcACAGACAAAAACAGA
TTACTCCAACAGAAGCATGATAATATGTCAAGAACAATTGAAATAGCTAA
AAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAattACAGAATGAGA
ATGACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCAAAAA
GAAGAGGATACAAAAGACACCTACCTgatAAAATTACAGAATCAGTTTGA
TGAACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGAGGATGAGG
AGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAAAG
ATCAGTATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAatt
gaaagaaatgaatttaTCAAAGActGACTCAGACGAAAAACCTGCGAAGA
GTTCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTTACGAGCTTATTT
CAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAA
ATCCCAACATTTAGGGGAACGTATAACAGTCGTAATGGAGCAACTGAAGA
CCAAACAAGACGAACTGaaaaaaatacacaacacaaatGTCTGAAGCAGG
AATAAACTCTCTTTTCTTCTGAGTTGTCTCACTATCATTGGTCGGTGGTA
AGTCAGGGTGGCTTCTCTGTGAGACAAATTTCATCTGGTATAGTATACAT
AATACCATGTTTAATTATTGTATATAGATTTTTTTGGCTCCACGAACTAT
GTTATCCTTGTGTATGTTTGTATAGTTTGTGTTATATTACAATTCTTTAA
TCCATCGAATCTCTGATATCGCTTCAtttcatcttttgttttaaaattct
gGGAAAATTCATCTATAAGGCTCAAAATTGTAGTTTATGATTTAACAGAA
CATATATCTTTTGCAGCTAGtcagtcaatcaatcaattCTAGAGACGAAA
CGTAACCAGCTGTCGCTTGCACTGAATACAATTTGGTTGAATGCATAAAG
GTTTCCTCTACTGATCCATATGACATTATTTCAGCTTCCATCGAACTGTT
AGTATCATTTTTAAGGTCTGTGTTCATTGTTTGGCCTCATGGGGCGGCCT
ATTTCCTTATGGATATACATTAACACTGTTGATGAGGCTTTCGATTTCTT
CCGCTTCGCTCTCTTCAAGTTGTCGCACGACATCCACAACTGACAAAGGG
TGTGGtact
Run BLAST on NCBI

protein sequence of TCONS_00060240-protein

>TCONS_00060240-protein ID=TCONS_00060240-protein|Name=TCONS_00060240-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
MTDDGIVAHFKELQQEKKKLQNRLDHFRFRRKDLESKQGSVTDKNRLLQQ
KHDNMSRTIEIAKRKLQESQLQVEKLQNENDEHQAYIKLVKTSLQKEEDT
KDTYLIKLQNQFDELSNDFRGAKKFYEDEELEKEVEHWKNTCQRRKISIE
TGAELVNQISSQLKEMNLSKTDSDEKPAKSSWKEVNTHQDFLTSLFQEDF
SKLESLITQEQNKSQHLGERITVVMEQLKTKQDELKKIHNTNV
Run BLAST on NCBI

transcript from alignment at scaffold_339:189800..194674+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060240 ID=TCONS_00060240|Name=TCONS_00060240|organism=Clytia hemisphaerica|type=transcript|length=4875bp|location=Sequence derived from alignment at scaffold_339:189800..194674+ (Clytia hemisphaerica)
ctAGATTCTCTTAAAGGTATCTATTAGCATCTATTTGAGAGTGGacacag
aaaaaatttaaaatgacaGATGATGGCATTGTGGCACATTTTAAAGAACT
TCAGCAAGGTGGGTAGCATTATCTTGATTTATcaactaacttttttttgc
aACTCTAGTCATCTCTATCATGCGTTTTTTGCTAATAAtatgaaattcaa
aatatagAACTTCTCCTCATTCCACCATACTCTGGTTTTGAGCTAtgttt
ttttaaacataatCCAATCAGAATCAAGTTAAGTTCAGTTCTTCTTTATC
GACAAAGATTTGTAATAACATTTTTATAGGGGGGGGGACATTCAAGTCCT
GGAGCCATACAGTAATATGTTGTGATATTATTCATTTTAGTCTTTTTTCT
TAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGG
AAAGATTTAGAATCAAAACAAGGCTCAGGTATCATTTCGAAGAGTATAGT
TGTATTATATATTCTGGtactattattatttttttaaatttccataAGCG
AAACCAACTCTGGATTGCTCAGAAATTTAGTATTTAATAGATTCTGTTTT
GTTTACTCCGATTTGTGTTCACTTGCCTGAtaaaatgggctgttccatta
aatttccatataggggggtggacaaacctttttaaggcaaaaaaggttCT
TAGAAATTACCTACCTCTTagaaaccccctggaaaatggcaaaagttGTA
AAAGAAgccttgaaaaattcttttcatacatTTAacgtgagggtggacga
actaaaatcagtcttttacccctggaaattttagaataaacttctacctc
ctggaaaaatgaaaaatactcGTTTAgacccccctggaaatgtttgtcca
ccccctgtatggatataaaatggaatagcccaatgacTAGCCCTTTTTGC
AATAACTTTGAAAGTTTTATTGTgtactttttcttattttagtcACAGAC
AAAAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGTTAGTGTTT
TTTCAGACAAAACTTTTAGCTTTTAAGTACataatgtttcatttttttca
tgtttcaaattttaatgtatATGTGTTTACCAGTTGATGCCGTGCAATTT
TGAGTTTGTTAAAGAAGCACACTTTTACTTAGTGTATATACAACACTTTG
TCTTTAGTCTAGTTTCAGTTTCAATACAGTCATTTCTTTGCTTTTGTATT
ATACAGGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTA
CAAGTTGAGAAGTAGGTTTTTTGCAGTTTCTTTAGTCGTTTTTCAGAAAG
ACTAAATCGCATATTCAGTATCAAGACTTGATTGTTTATTGTCTTGCTCA
GGGTATCAGAAAATAAATTATCAGTCGATTTGAGGACATGAAGTATCTGT
TAAAAATGCCCTTGCCTTTGTTAATGACCTTGAAAATTCAAGATTACTTT
TCCAATGGGCTATTctagaaatagtctgtaccccctatgttagGTGTGAC
ATTCaaggtggtctggaaaataaaaaatccaggtctggatttttgaatga
taaaatccagttggtcagtaaaatcgggttaaaaatccagggtgaccagt
ataacgaggtcgaaaatccagcGTGGTCCAAAGAATTGGGATAAAAAAAT
CCATGGGGGTCCTgaataaaatccaaaaaaaagatCTCAACAtaaggggt
acaaattttttctggaatagcccattgatATATGTAtgttttcttctttg
tttttagattACAGAATGAGAATGACGAACATCAGGCATACATCAAACTC
GTTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTGta
cattttttttaacaaagttgTGAATGAGCTTTTtattgggaaaatgtttt
tcaaaacaaaagcaagGGATTTAATTTATTACATACTTTGTCAAATATTG
ATAAAAAGCCATTACCACCCCTTTTCCATTGCATTGTTGATGTGATAGAC
ACCCTTACTCAGTTTTCCAATTTAATATTGTCTTTTTATGATGaatagtt
tttttgttttcaggatAAAATTACAGAATCAGTTTGATGAACTATCAAAT
GATTTTAGAGGTGCAAAAAAGTTTTACGTGAGTGtaataaatcatttttg
agaaGCGATTTTCTTTGTTAGGAGGATGTTTTTGTTACTGATTATACCTT
CAGGATTAATAATTTCTTGCTTTTAATTTTGCTGATCGATTTTGCTTTGT
TGTCAGAACATGATTCAACGATTTCATGTGAAGTCGAGCATTTGATTGAG
CAGTATTACTTCTTTTCTCATAAATTATTCACTTTTCCTCGTATAGGAGG
ATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGG
AGAAAGATCAGTAGTAAGAACCATTTTTCTAAATCAACCCCTAAAAATGA
GGGTTGCCACTTTTTGATAATGAAGACAGGGAAAGTTCTcttattaaaat
aataactcaCATTTAGAACCTTCAAATTCTTTGGGAAAGTATCATTTATT
CCTACTGATAATTATCTTTTATCGTAGAATTTATATATATGATGGCTGAC
AAAATGTGTTTGGAGTAATGCCGTTTTTCCCTATTTTGCAATTAATTTTG
TGACGTGTAAATAATTTTCAACAGGGGGATTCGACCATTcgtaatttgaa
taaaaaagacaGAAAACAGTTGCTTCTGAATGAAACAATTCCCCCTAATA
AAGGTGCCGCAAGctaaaatcgctagcgaaaaaaaAAACGCTGCAAATAT
GACTTCAGACACGTACGGCTATTATTATATAGATAAAAATAgatataaaa
aaatccaaaatcatTGGCGCTTTTCGagatttcttcatttctttctttaa
cCAAATACTGCTCTAACGGTACTTATTCTAATACTTATTTCTACCCTAGA
TAAGAACTTTAATCGTCTAGCTCCTGTTGATGCGTTTAAGTAAGAAAACC
AATTATTGTGGATTTATTTTTAGTTGAAACTGGTGCCGAATTGGTGAATC
AGATTTCTTCTCAattgaaagaaatgaatttaTCAAAGAGTAAGAAATCA
CTGCTTTTTATACATTAATCTCCCataattttcaataaagactTTTTAGT
CGAATTTTGATTTCTGTTTATTcgtttgtttcgaattttaaaggttttgg
ttGCACAAGTTTATAGTTCTTCTCCTCATAAATCAGTTATGTAATGaagt
aaatttatttttagctGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGA
AAGAAGTGAATACCCATCAAGACTTTCTTACGTAGGTGGTCTGTCCTTAT
ATCTGAATAACGCGATTAAGAAATTTTATCAACAAATGCTCTAAAATTTC
TTCGAAAATGGTTTGAAGCCTTAcatgatgtttttgaaaatgtgttcTAT
TTTTGCCAGAAAGGGATTTATTAGGCCAAAATAAAAATAGTGTTGAAGGT
CAGAGTCCTCACGTTGAAATAGTTTTTATTGTGGGAACTCCATGGGGGGT
ATCGACTTTCTTCGTTTAATACGAGAGTTGAATCCTGATTAAGATGCAAT
AGAGTTTGACGGTTGGTTTTAATAGTTTTTATTTAAGATCGTTCTAGGGG
ATTTCGATTATCCCTTGTTTAGTTCTGATTGAAGCTTTTGGGTTCATTTT
CTGAGTTCTTTCTTTTGTCTTcttgattttttccttattaCAATAGGAGC
TTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACA
AAACAAATCCCAACATTTAGGGGAACGGTTTGTTATTTATCTTATGTTAA
AATCTTTGTTTCATCATCCAAAACTTGACTTTATATCCATTATGTTTTCC
TTTTTGATCAAAAAAGatccaaaaaattataaaaagtaaagtgtgaaaac
aaaagaatgaaaaacttataagaaaaaataatgtcaaaaaaatacaaaag
gcAGTATTTACATAATTCATGAGGcatcttttccttttttttattatttg
caatattttcacttttaatGTAAGGAGAGGAAAATCAATATACCATATTT
CCCTCGGCTACTTTGTCCCTTTCTTTTCTCCCCTCAGTATAACAGTCGTA
ATGGAGCAACTGAAGACCAAACAAGACGAACTGaaaaaaatacacaacac
aaatGTCTGAAGCAGGAATAAACTCTCTTTTCTTCTGAGTTGTCTCACTA
TCATTGGTCGGTGGTAAGTCAGGGTGGCTTCTCTGTGAGACAAATTTCAT
CTGGTATAGTATACATAATACCATGTTTAATTATTGTATATAGATTTTTT
TGGCTCCACGAACTATGTTATCCTTGTGTATGTTTGTATAGTTTGTGTTA
TATTACAATTCTTTAATCCATCGAATCTCTGATATCGCTTCAtttcatct
tttgttttaaaattctgGGAAAATTCATCTATAAGGCTCAAAATTGTAGT
TTATGATTTAACAGAACATATATCTTTTGCAGCTAGtcagtcaatcaatc
aattCTAGAGACGAAACGTAACCAGCTGTCGCTTGCACTGAATACAATTT
GGTTGAATGCATAAAGGTTTCCTCTACTGATCCATATGACATTATTTCAG
CTTCCATCGAACTGTTAGTATCATTTTTAAGGTCTGTGTTCATTGTTTGG
CCTCATGGGGCGGCCTATTTCCTTATGGATATACATTAACACTGTTGATG
AGGCTTTCGATTTCTTCCGCTTCGCTCTCTTCAAGTTGTCGCACGACATC
CACAACTGACAAAGGGTGTGGtact

Coding sequence (CDS) from alignment at scaffold_339:189800..194674+

>TCONS_00060240 ID=TCONS_00060240|Name=TCONS_00060240|organism=Clytia hemisphaerica|type=CDS|length=8052bp|location=Sequence derived from alignment at scaffold_339:189800..194674+ (Clytia hemisphaerica)
atgacaGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGAGAA
AAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATT
TAGAATCAAAACAAGGCTCAGtcACAGACAAAAACAGATTACTCCAACAG
AAGCATGATAATATGTCAAGAACAATTGAAATAGCTAAAAGAAAATTGCA
AGAGTCCCAATTACAAGTTGAGAAattACAGAATGAGAATGACGAACATC
AGGCATACATCAAACTCGTTAAAACTTCTCTCCAAAAAGAAGAGGATACA
AAAGACACCTACCTgatAAAATTACAGAATCAGTTTGATGAACTATCAAA
TGATTTTAGAGGTGCAAAAAAGTTTTACGAGGATGAGGAGCTGGAAAAAG
AGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGTATTGAA
ACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAattgaaagaaatgaa
tttaTCAAAGActGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGAAAG
AAGTGAATACCCATCAAGACTTTCTTACGAGCTTATTTCAAGAAGATTTC
TCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAAATCCCAACATTT
AGGGGAACGTATAACAGTCGTAATGGAGCAACTGAAGACCAAACAAGACG
AACTGaaaaaaatacacaacacaaatGTCTGAatgacaGATGATGGCATT
GTGGCACATTTTAAAGAACTTCAGCAAGAGAAAAAGAAGCTTCAAAACCG
TCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGAATCAAAACAAGGCT
CAGtcACAGACAAAAACAGATTACTCCAACAGAAGCATGATAATATGTCA
AGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGT
TGAGAAattACAGAATGAGAATGACGAACATCAGGCATACATCAAACTCG
TTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTgatA
AAATTACAGAATCAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAA
AAAGTTTTACGAGGATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAA
ACACCTGCCAAAGGAGAAAGATCAGTATTGAAACTGGTGCCGAATTGGTG
AATCAGATTTCTTCTCAattgaaagaaatgaatttaTCAAAGActGACTC
AGACGAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCCATCAAG
ACTTTCTTACGAGCTTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTG
ATAACACAAGAACAAAACAAATCCCAACATTTAGGGGAACGTATAACAGT
CGTAATGGAGCAACTGAAGACCAAACAAGACGAACTGaaaaaaatacaca
acacaaatGTCTGAatgacaGATGATGGCATTGTGGCACATTTTAAAGAA
CTTCAGCAAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATT
CAGAAGGAAAGATTTAGAATCAAAACAAGGCTCAGtcACAGACAAAAACA
GATTACTCCAACAGAAGCATGATAATATGTCAAGAACAATTGAAATAGCT
AAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAattACAGAATGA
GAATGACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCAAA
AAGAAGAGGATACAAAAGACACCTACCTgatAAAATTACAGAATCAGTTT
GATGAACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGAGGATGA
GGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAA
AGATCAGTATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAa
ttgaaagaaatgaatttaTCAAAGActGACTCAGACGAAAAACCTGCGAA
GAGTTCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTTACGAGCTTAT
TTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAAC
AAATCCCAACATTTAGGGGAACGTATAACAGTCGTAATGGAGCAACTGAA
GACCAAACAAGACGAACTGaaaaaaatacacaacacaaatGTCTGAatga
caGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGAGAAAAAG
AAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGA
ATCAAAACAAGGCTCAGtcACAGACAAAAACAGATTACTCCAACAGAAGC
ATGATAATATGTCAAGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAG
TCCCAATTACAAGTTGAGAAattACAGAATGAGAATGACGAACATCAGGC
ATACATCAAACTCGTTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAG
ACACCTACCTgatAAAATTACAGAATCAGTTTGATGAACTATCAAATGAT
TTTAGAGGTGCAAAAAAGTTTTACGAGGATGAGGAGCTGGAAAAAGAGGT
CGAACATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGTATTGAAACTG
GTGCCGAATTGGTGAATCAGATTTCTTCTCAattgaaagaaatgaattta
TCAAAGActGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGAAAGAAGT
GAATACCCATCAAGACTTTCTTACGAGCTTATTTCAAGAAGATTTCTCAA
AGCTAGAAAGCCTGATAACACAAGAACAAAACAAATCCCAACATTTAGGG
GAACGTATAACAGTCGTAATGGAGCAACTGAAGACCAAACAAGACGAACT
GaaaaaaatacacaacacaaatGTCTGAatgacaGATGATGGCATTGTGG
CACATTTTAAAGAACTTCAGCAAGAGAAAAAGAAGCTTCAAAACCGTCTT
GACCACTTTCGATTCAGAAGGAAAGATTTAGAATCAAAACAAGGCTCAGt
cACAGACAAAAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGAA
CAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAG
AAattACAGAATGAGAATGACGAACATCAGGCATACATCAAACTCGTTAA
AACTTCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTgatAAAAT
TACAGAATCAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAAAAAG
TTTTACGAGGATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACAC
CTGCCAAAGGAGAAAGATCAGTATTGAAACTGGTGCCGAATTGGTGAATC
AGATTTCTTCTCAattgaaagaaatgaatttaTCAAAGActGACTCAGAC
GAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCCATCAAGACTT
TCTTACGAGCTTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAA
CACAAGAACAAAACAAATCCCAACATTTAGGGGAACGTATAACAGTCGTA
ATGGAGCAACTGAAGACCAAACAAGACGAACTGaaaaaaatacacaacac
aaatGTCTGAatgacaGATGATGGCATTGTGGCACATTTTAAAGAACTTC
AGCAAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGA
AGGAAAGATTTAGAATCAAAACAAGGCTCAGtcACAGACAAAAACAGATT
ACTCCAACAGAAGCATGATAATATGTCAAGAACAATTGAAATAGCTAAAA
GAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAattACAGAATGAGAAT
GACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCAAAAAGA
AGAGGATACAAAAGACACCTACCTgatAAAATTACAGAATCAGTTTGATG
AACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGAGGATGAGGAG
CTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAAAGAT
CAGTATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAattga
aagaaatgaatttaTCAAAGActGACTCAGACGAAAAACCTGCGAAGAGT
TCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTTACGAGCTTATTTCA
AGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAAAT
CCCAACATTTAGGGGAACGTATAACAGTCGTAATGGAGCAACTGAAGACC
AAACAAGACGAACTGaaaaaaatacacaacacaaatGTCTGAatgacaGA
TGATGGCATTGTGGCACATTTTAAAGAACTTCAGCAAGAGAAAAAGAAGC
TTCAAAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGAATCA
AAACAAGGCTCAGtcACAGACAAAAACAGATTACTCCAACAGAAGCATGA
TAATATGTCAAGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCC
AATTACAAGTTGAGAAattACAGAATGAGAATGACGAACATCAGGCATAC
ATCAAACTCGTTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAGACAC
CTACCTgatAAAATTACAGAATCAGTTTGATGAACTATCAAATGATTTTA
GAGGTGCAAAAAAGTTTTACGAGGATGAGGAGCTGGAAAAAGAGGTCGAA
CATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGTATTGAAACTGGTGC
CGAATTGGTGAATCAGATTTCTTCTCAattgaaagaaatgaatttaTCAA
AGActGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAAT
ACCCATCAAGACTTTCTTACGAGCTTATTTCAAGAAGATTTCTCAAAGCT
AGAAAGCCTGATAACACAAGAACAAAACAAATCCCAACATTTAGGGGAAC
GTATAACAGTCGTAATGGAGCAACTGAAGACCAAACAAGACGAACTGaaa
aaaatacacaacacaaatGTCTGAatgacaGATGATGGCATTGTGGCACA
TTTTAAAGAACTTCAGCAAGAGAAAAAGAAGCTTCAAAACCGTCTTGACC
ACTTTCGATTCAGAAGGAAAGATTTAGAATCAAAACAAGGCTCAGtcACA
GACAAAAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGAACAAT
TGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAat
tACAGAATGAGAATGACGAACATCAGGCATACATCAAACTCGTTAAAACT
TCTCTCCAAAAAGAAGAGGATACAAAAGACACCTACCTgatAAAATTACA
GAATCAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTT
ACGAGGATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGC
CAAAGGAGAAAGATCAGTATTGAAACTGGTGCCGAATTGGTGAATCAGAT
TTCTTCTCAattgaaagaaatgaatttaTCAAAGActGACTCAGACGAAA
AACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTT
ACGAGCTTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACA
AGAACAAAACAAATCCCAACATTTAGGGGAACGTATAACAGTCGTAATGG
AGCAACTGAAGACCAAACAAGACGAACTGaaaaaaatacacaacacaaat
GTCTGAatgacaGATGATGGCATTGTGGCACATTTTAAAGAACTTCAGCA
AGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTTTCGATTCAGAAGGA
AAGATTTAGAATCAAAACAAGGCTCAGtcACAGACAAAAACAGATTACTC
CAACAGAAGCATGATAATATGTCAAGAACAATTGAAATAGCTAAAAGAAA
ATTGCAAGAGTCCCAATTACAAGTTGAGAAattACAGAATGAGAATGACG
AACATCAGGCATACATCAAACTCGTTAAAACTTCTCTCCAAAAAGAAGAG
GATACAAAAGACACCTACCTgatAAAATTACAGAATCAGTTTGATGAACT
ATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGAGGATGAGGAGCTGG
AAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAAGGAGAAAGATCAGT
ATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCTTCTCAattgaaaga
aatgaatttaTCAAAGActGACTCAGACGAAAAACCTGCGAAGAGTTCTT
GGAAAGAAGTGAATACCCATCAAGACTTTCTTACGAGCTTATTTCAAGAA
GATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAACAAAACAAATCCCA
ACATTTAGGGGAACGTATAACAGTCGTAATGGAGCAACTGAAGACCAAAC
AAGACGAACTGaaaaaaatacacaacacaaatGTCTGAatgacaGATGAT
GGCATTGTGGCACATTTTAAAGAACTTCAGCAAGAGAAAAAGAAGCTTCA
AAACCGTCTTGACCACTTTCGATTCAGAAGGAAAGATTTAGAATCAAAAC
AAGGCTCAGtcACAGACAAAAACAGATTACTCCAACAGAAGCATGATAAT
ATGTCAAGAACAATTGAAATAGCTAAAAGAAAATTGCAAGAGTCCCAATT
ACAAGTTGAGAAattACAGAATGAGAATGACGAACATCAGGCATACATCA
AACTCGTTAAAACTTCTCTCCAAAAAGAAGAGGATACAAAAGACACCTAC
CTgatAAAATTACAGAATCAGTTTGATGAACTATCAAATGATTTTAGAGG
TGCAAAAAAGTTTTACGAGGATGAGGAGCTGGAAAAAGAGGTCGAACATT
GGAAAAACACCTGCCAAAGGAGAAAGATCAGTATTGAAACTGGTGCCGAA
TTGGTGAATCAGATTTCTTCTCAattgaaagaaatgaatttaTCAAAGAc
tGACTCAGACGAAAAACCTGCGAAGAGTTCTTGGAAAGAAGTGAATACCC
ATCAAGACTTTCTTACGAGCTTATTTCAAGAAGATTTCTCAAAGCTAGAA
AGCCTGATAACACAAGAACAAAACAAATCCCAACATTTAGGGGAACGTAT
AACAGTCGTAATGGAGCAACTGAAGACCAAACAAGACGAACTGaaaaaaa
tacacaacacaaatGTCTGAatgacaGATGATGGCATTGTGGCACATTTT
AAAGAACTTCAGCAAGAGAAAAAGAAGCTTCAAAACCGTCTTGACCACTT
TCGATTCAGAAGGAAAGATTTAGAATCAAAACAAGGCTCAGtcACAGACA
AAAACAGATTACTCCAACAGAAGCATGATAATATGTCAAGAACAATTGAA
ATAGCTAAAAGAAAATTGCAAGAGTCCCAATTACAAGTTGAGAAattACA
GAATGAGAATGACGAACATCAGGCATACATCAAACTCGTTAAAACTTCTC
TCCAAAAAGAAGAGGATACAAAAGACACCTACCTgatAAAATTACAGAAT
CAGTTTGATGAACTATCAAATGATTTTAGAGGTGCAAAAAAGTTTTACGA
GGATGAGGAGCTGGAAAAAGAGGTCGAACATTGGAAAAACACCTGCCAAA
GGAGAAAGATCAGTATTGAAACTGGTGCCGAATTGGTGAATCAGATTTCT
TCTCAattgaaagaaatgaatttaTCAAAGActGACTCAGACGAAAAACC
TGCGAAGAGTTCTTGGAAAGAAGTGAATACCCATCAAGACTTTCTTACGA
GCTTATTTCAAGAAGATTTCTCAAAGCTAGAAAGCCTGATAACACAAGAA
CAAAACAAATCCCAACATTTAGGGGAACGTATAACAGTCGTAATGGAGCA
ACTGAAGACCAAACAAGACGAACTGaaaaaaatacacaacacaaatGTCT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037895XLOC_037895Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060240-proteinTCONS_00060240-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060240-exon-scaffold_339-1491911889:189800..189907TCONS_00060240-exon-scaffold_339-1491911889:189800..189907Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:189800..189907TCONS_00060240-exon-scaffold_339-1510915933:189800..189907Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:189800..189907TCONS_00060240-exon-scaffold_339-1575043694:189800..189907Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:190203..190277TCONS_00060240-exon-scaffold_339-1491911889:190203..190277Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:190203..190277TCONS_00060240-exon-scaffold_339-1510915933:190203..190277Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:190203..190277TCONS_00060240-exon-scaffold_339-1575043694:190203..190277Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:190792..190839TCONS_00060240-exon-scaffold_339-1491911889:190792..190839Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:190792..190839TCONS_00060240-exon-scaffold_339-1510915933:190792..190839Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:190792..190839TCONS_00060240-exon-scaffold_339-1575043694:190792..190839Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:191056..191110TCONS_00060240-exon-scaffold_339-1491911889:191056..191110Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:191056..191110TCONS_00060240-exon-scaffold_339-1510915933:191056..191110Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:191056..191110TCONS_00060240-exon-scaffold_339-1575043694:191056..191110Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:191607..191696TCONS_00060240-exon-scaffold_339-1491911889:191607..191696Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:191607..191696TCONS_00060240-exon-scaffold_339-1510915933:191607..191696Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:191607..191696TCONS_00060240-exon-scaffold_339-1575043694:191607..191696Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:191913..191976TCONS_00060240-exon-scaffold_339-1491911889:191913..191976Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:191913..191976TCONS_00060240-exon-scaffold_339-1510915933:191913..191976Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:191913..191976TCONS_00060240-exon-scaffold_339-1575043694:191913..191976Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:192196..192262TCONS_00060240-exon-scaffold_339-1491911889:192196..192262Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:192196..192262TCONS_00060240-exon-scaffold_339-1510915933:192196..192262Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:192196..192262TCONS_00060240-exon-scaffold_339-1575043694:192196..192262Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:192873..192938TCONS_00060240-exon-scaffold_339-1491911889:192873..192938Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:192873..192938TCONS_00060240-exon-scaffold_339-1510915933:192873..192938Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:192873..192938TCONS_00060240-exon-scaffold_339-1575043694:192873..192938Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:193114..193180TCONS_00060240-exon-scaffold_339-1491911889:193114..193180Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:193114..193180TCONS_00060240-exon-scaffold_339-1510915933:193114..193180Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:193114..193180TCONS_00060240-exon-scaffold_339-1575043694:193114..193180Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:193596..193676TCONS_00060240-exon-scaffold_339-1491911889:193596..193676Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:193596..193676TCONS_00060240-exon-scaffold_339-1510915933:193596..193676Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:193596..193676TCONS_00060240-exon-scaffold_339-1575043694:193596..193676Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1491911889:193987..194674TCONS_00060240-exon-scaffold_339-1491911889:193987..194674Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1510915933:193987..194674TCONS_00060240-exon-scaffold_339-1510915933:193987..194674Clytia hemisphaericaexon
TCONS_00060240-exon-scaffold_339-1575043694:193987..194674TCONS_00060240-exon-scaffold_339-1575043694:193987..194674Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:189800..194674 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.39977	1.48153	1.84085	2.57824	0.501991	0.635551	0	0.876156	0.484967	0.278848	0	0.165511	0.150839	0.445524	0.489963	0	1.7898	1.62097	0	0	3.05108	2.68337	0.927513	1.74914	74.7595	64.9778	0	0	0.699892	0.238311
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060240 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top