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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060233 ID=TCONS_00060233|Name=TCONS_00060233|organism=Clytia hemisphaerica|type=transcript|length=494bp
TGAAAACAAGATTTTTAGACATTACAATGCAGTTAGCAGTACACGACTGA
GGCACTTCCCTAACAAAGGGATTCAGAAAGAGAAGGAGAGGATACCAACA
ACAGAATGACAAAGAACTGCACAAATGCATACGCCAGATTAGTGGGAATG
CACTATGGTTACCAAGTTTGGGAATTGAGTGCTTTTAACGAGAATGGCCA
ATGCATCGTCAAAGTAACAGAAGACATGGAAAGTCATATCTTGAAataca
aatatttttgtaataaaGTCACCGCCAGAGGCTATCAACTGACTCCAGCA
CAGAAATCTTTATTGACAAGCACATTGGGTCTTAGTATTCAAGACACttt
gagaagaaagaagaaagttAACTTTTCAGCTCTTTTTGCGAAGAATTAAG
AAGATGTCCTTCGTTTCGAACATAATTGTATACTCATAAAATAACATATT
CGTATTATAACTTGTTGTAACATGTATGGTGGCATCATAACCTG Run BLAST on NCBI transcript from alignment at scaffold_339:91824..92883+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060233 ID=TCONS_00060233|Name=TCONS_00060233|organism=Clytia hemisphaerica|type=transcript|length=1060bp|location=Sequence derived from alignment at scaffold_339:91824..92883+ (Clytia hemisphaerica)
TGAAAACAAGATTTTTAGACATTACAATGCAGTTAGCAGTACACGACTGA
GGCACTTCCCTAACAAAGGTAGGTCAATtgtaataattttaatttttatc
aatataaaaaagtcttttttgaatattttaataaTGTTGTCTAAAGTAAA
CTATTGATGATTTGAATTGGAATTAGACATTTATTTGGTTCGAATCGCAG
ATAGATTCAAATTAcatagttcgaattacagaaaagaTCGAATGACACTT
TCGTTAGAAATTCGAATTATTGTTTAATTataatagcgctccgcaacgca
tacgtcataattattacttttcacttttttttgacatttgtacgagttgc
aatcccacaattcaatgcagctcaattaaagatacgtgcaagttgttata
tatctGTTGTCAAATtttgcaattaacgtgcaaaagagattaaacgcaaa
ggttgatgggattggaactcgtacaaacacatcgagagtaatgattatgt
caaaaataaaatctatttttagattcagcgtgGTGCGCTATTGCCAAAAC
CACCAATCAACAAACATAGCTATGTTTTATAtctcaaaatgttcaaaata
cttttcatgctaaatttacCTGTTTTTCTATTAGGGATTCAGAAAGAGAA
GGAGAGGATACCAACAACAGAATGACAAAGAACTGCACAAATGCATACGC
CAGATTAGTGGGAATGCACTATGGTTACCAAGTTTGGGAATTGAGTGCTT
TTAACGAGAATGGCCAATGCATCGTCAAAGTAACAGAAGACATGGAAAGT
CATATCTTGAAatacaaatatttttgtaataaaGTCACCGCCAGAGGCTA
TCAACTGACTCCAGCACAGAAATCTTTATTGACAAGCACATTGGGTCTTA
GTATTCAAGACACtttgagaagaaagaagaaagttAACTTTTCAGCTCTT
TTTGCGAAGAATTAAGAAGATGTCCTTCGTTTCGAACATAATTGTATACT
CATAAAATAACATATTCGTATTATAACTTGTTGTAACATGTATGGTGGCA
TCATAACCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060233-exon-scaffold_339-1491911889:91824..91891 | TCONS_00060233-exon-scaffold_339-1491911889:91824..91891 | Clytia hemisphaerica | exon |
| TCONS_00060233-exon-scaffold_339-1510915933:91824..91891 | TCONS_00060233-exon-scaffold_339-1510915933:91824..91891 | Clytia hemisphaerica | exon |
| TCONS_00060233-exon-scaffold_339-1575043694:91824..91891 | TCONS_00060233-exon-scaffold_339-1575043694:91824..91891 | Clytia hemisphaerica | exon |
| TCONS_00060233-exon-scaffold_339-1491911889:92458..92883 | TCONS_00060233-exon-scaffold_339-1491911889:92458..92883 | Clytia hemisphaerica | exon |
| TCONS_00060233-exon-scaffold_339-1510915933:92458..92883 | TCONS_00060233-exon-scaffold_339-1510915933:92458..92883 | Clytia hemisphaerica | exon |
| TCONS_00060233-exon-scaffold_339-1575043694:92458..92883 | TCONS_00060233-exon-scaffold_339-1575043694:92458..92883 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:91824..92883 + |
Blast
The following BLAST results are available for this feature:
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