|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060229 ID=TCONS_00060229|Name=TCONS_00060229|organism=Clytia hemisphaerica|type=transcript|length=1166bp
tcttttccaaaaattaagagGTGTTAAAGgtgatcgaaacaaaaaatatt
cataatgAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAAGGATGT
CTACTGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGATAGTGGT
GATAGACAACGTTTAAATATTGATGATAATGATACATCTATTGATATCAA
AATCCCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAACCGTTA
ACGTATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCCGTTGTG
TTTATATGTTTATATTTccatcaaaaagatttattagACTTTTACAAGAA
TAAGGAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCACCGAACT
GTACGGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCTGCTTTT
ATGCAGGCTGCCATGGACACTACGATAAATCCGTGTGacgatttttattt
atattcgtGCGCCGGATGGATAAAACGTAACCCGATTCCGGACGGCGAGT
CGGCTTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGTATACTT
AAAGACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGTTACTAG
CGTTGCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGAACTTGA
AACGTATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATGAACGAC
GTTACAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCATAAGAC
TTTGATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGCAACCGT
TCTTCAGTATCTCAGTCGGTCATGATGATAAAGACTcttccaaaaatatt
ttacagTTTTACCAATCTGGTATCACAATGGCGCCTTACATTTATGACGA
AAAAACGAACCAAAGTAAACAGATCGTTGAAGAATCCATCAAATATATGG
TAGCATTGGGATCAAAGATTGATCATGATTTCGCGACGGTGGAAGAACTC
CGCGAGATGGCCAACGATGTGTATGAATTTGAGAAGAGCTTGAAACAGAT
ATACGTTCCACCTGAGAAATTGGTGACCATCGACCAAATGTATCATAAAA
CGACACTCAAGGAGNN Run BLAST on NCBI protein sequence of TCONS_00060229-protein >TCONS_00060229-protein ID=TCONS_00060229-protein|Name=TCONS_00060229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MNSKPWRGGRGSRRMSTEDSTEDLISKQNDSGDRQRLNIDDNDTSIDIKI
PRDNTYNRPWRKKTVNVSFLVLSIVFLLIAVVFICLYFHQKDLLDFYKNK
EKSSSSHVKPTHAPNCTDNVCVTPGCVEAAAFMQAAMDTTINPCDDFYLY
SCAGWIKRNPIPDGESAWDTISVVMKRNQRILKDILEDPRVKKATDVTSV
AEHNAYKIFRSCKNLKRINKQGIQPLVSLMNDVTNFVTLNSTDTLRHKTL
MSLFTTLYKQTRMQPFFSISVGHDDKDSSKNILQFYQSGITMAPYIYDEK
TNQSKQIVEESIKYMVALGSKIDHDFATVEELREMANDVYEFEKSLKQIY
VPPEKLVTIDQMYHKTTLKE Run BLAST on NCBI transcript from alignment at scaffold_339:7558..16801+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060229 ID=TCONS_00060229|Name=TCONS_00060229|organism=Clytia hemisphaerica|type=transcript|length=9244bp|location=Sequence derived from alignment at scaffold_339:7558..16801+ (Clytia hemisphaerica)
tcttttccaaaaattaagagGTGTTAAAGGTAATGAATGGGAGTGaacct
ttaaattttttgatttggcatttttctattcttttcatTGGCTTTATAAT
GTAGACTTTCTTATCTTTCTTTTCGTTTTCACTGTCTGCTCTTCTCTGTT
CTTCTTTAATTCTCTATTTTTTTTCGACAGCTAGAAAGACAGAAACATTC
CTTTATCATAACTTCTCTCACAACAAGATGGTTTTTCTCGCTATGAACTC
ACTATTACAGCCCACACACGAGTAAGCAGATGTACTGTAGTCTGTTCCTG
CTAAGCTTTGAGCTTTTTTTCACAGAATAAGAACAAAGTACTTTATGTTT
TCTTCAACGAAGGCAAGGGAAGATTTATTGCCATTTGAGTCTTTATATTG
TAGAAAGACAATCTCTGGTTTGTTTATTATGTAAATGAAAATCGAGTAAA
ATAGGGgttatttttgctttttgccaGTTCTACTACTGTTTAGTCTACCT
TCCTTAACTTTGGAAAGTCCTTCCCcattttttccccatttttatGTTAA
ACTGTAAGTCTATCTACTTGAAAACGACTCTTTTTTTGTGCAAACCTTGT
GTCTTTAACTTTATAAGACGATTTTTACAAATCTAGGACAATTTTATTCA
AAGATTGGACCTTCTGTTTAATTTTATATAGTTAAAGAATACCAACAGCT
TGATTTCATGCAGACTGAATAACTCCTGGTATTTTGTTCCCGTTTTGCTC
CATTAATGTTTCGTTTATATTATTaagtctgttcttataaaaagcataAT
ATTAAAATTAATTTAAGAATGGGCTACTAGACTAATGCTGCTCTAGGGAA
TCAAGAAAAATTGTACCCTGTCAAAAAAAAAGATGGAAGGGGATTTCGAC
ATTTTAAAAACAagtcttttcttattttcttgaatCTGCTAACCCTAAAT
ATGGttaaattttctcctttttaacCAGATATCTCGAAGATAAAGTCAAA
GTTGTAATGTAATTTCATTTTGCTGAGGTCAGGCTGTAGAGAGAAAGGTT
TCTTCTGTAgtctttttgcttttgttttgttttattattatGATAAACGG
AATGAAAATTCTTATTCATGAAGaatattatttttcatgattgaATNAAA
TTGTATCCTGTCAAAGAAAAAGATGGAAGggaatttcaacattttaaaaa
caagtctgttcttattttcttgaatCTGCTAACCCTAATATGGTTAAATT
CTCTCCTTTTTTCCAGATATTTCGAAAGATAAAGTCAAAGTTGTAATGTA
ATTTCATTTTGCTGAGGTCAGGCTGTAGAGAGAAAGGTTTCTTCTGTatt
atttttgcttttgttttgttttattattatGATAAACGGAATGAAAATTC
TTATTCATGAAGAATATTTACTTATTTTTAATGATTGAATGTTCGTTTTA
TGTTCAAGTATGATGTCGAGTGTTTGAGGCGGCTACCAGTCATCATAATC
AAGATTATTCAAAGGTCTATTGTTATAACGTGTTTAAGAGTCTCAAATAT
TTCTACTACTTTATCAATTTCTAAAGAGGTCTCTCATCAATTTTACGTTT
TCTGCTGTTTGCTACTGAAagctatgatttttttctattttctttgtcGT
TTTTTGAAATCGTCTTCGTCCGCTTGGTGCTTTTCAAGGCTACTTTACAT
CTTAAAATGGTTCGAAATATTCGTTTGGTTTCGCGGAATTTCAAGCTTTC
TTGGATTAAATACTTTTGTGAGAGAAAAAGAAGACTGGATTAATTCATAT
ACTAGCTTTTTTTCTTAATcgtttgttttcttttgatataaTATGTACGT
CTTtctctttgtgttttacaggtCTTTTCAATTATCATTGTTTGCTGTTT
ATGTTTTCTCAAATTAATCTGATAAATTTGattatctaattttttttgct
caataTTTGACTTCTCACGAACTACTCTCTCACGAATAAAATTAAAATAG
GATAAAGAATTGTATTTGAAACATGTTACTTCAGTCACATAACTTGCTGA
AATAGTTAAAGAAGAGAAGTCTTGTTTTAGTTGTATATTTTGAATTGATG
TCTATCGTCTATCGTACATGTTTAAAAGAAGCATTgaggattttaatttt
tgttcttttaaattaaataaatatttcGAATCTTCAACTCGAACTAAAGC
ATATAGAACAAGTTCTacaatttgaatctttctctcATCTTACGAAACGT
TTGGTTTGGTCCTTTGGTCCTTTGGTGGTGGGAGAGTCTtaattttaata
tttcaatatttgtcCCTTTGGCGAAGAAAGCTATTCAAATTCATGGTGAC
ACATTCATTATGACATCCTCTAATTGCAATTTTCGAAATTATCGGCATTC
CGATTTTCGAAATTCCATCTGCATTCcaattttcatgatttataGTCTAT
GCAATCCTCTATAAAATCTGATTTTCATTAATGATTAATGCTCAATTACT
TTATACATATTTACTGAaatgttttatttgaaaatcattaGGGTATTATC
TGTAGtagagcatttttaaggcgattTACATCTTGAGATAAAGCTCTGTA
AGGTCACTATTAGATAGCAATACTATAAAATAGTAGATTGCTTCATGCTT
GataaaaatctttcgttttcaaagGGTTTGAATAAACCATTGAATCTTAG
TAAAATCGGAAGTATTTTATCTCTTCACTATTATTTCAGATTTCAATCTA
TTTCCCCCTCCCCAGAAAAAGATATCCCGCCCCACCTTTTGGCTTAACTT
TTGCACACTGGTTCCTTCGGTCATTTTCTGAGGGTTTTATTTTGGGGCTT
TGGGCGAGTTTGATCTGGGATGAATAATCCGGGGtggttttcttttcact
tgttttttatttagattCCAGGGTTTTGGAaacaagaaataaaatattcc
aGGGCAGGTGGATAATGCTTCATATATGGCATGCTTCATATAATTCGAAT
TTTATGTTTTGGAAGAATCTTTTTTTGGAAGAATCttttttggaagaaat
ttttttggaagaatttttttctcatttcccAGCCTCATTTTCGAGTTTTC
AATCGAAATTCTATTAGAAGATTGCGACATACTATATCATTTTTTTCGTT
AAGTAAAGTAAACAACACTCGTAGATTCATGGAAACAGCTGTTTGCTGTA
TTTATTTTCCTCGAGATTCTTTGCTTTGCTACCGTAAGTAATAACCTGTG
ATAATTGGACACTTTTtcacaaataatttttttgtgaattttgataATCT
TAAATGTTAGCAGAAGTTTAAATCTTTACTAATTGCTACCTGGGTGGCTG
ATTTTTGCTTTATGGAGATTCTCCGATTTTCCTTCTACAAATTGGGGTGA
ACATCTGTGTGTGCAACAACACATTGAATTCTAAGCACTGAAGGGCTAAA
AGACCTCTTctagatgggaaatgaagccacatATTTCCCATCCGAAATGC
GAGACTCGCGTGGCTTTCACACAAAtaccggattgaaagtaaaattcatc
accagattttgaaaaatttgccaagtgaaaataaaataagCGCTTAATTC
GATACGCCATCATTCTAGATGCGGCGCAAAGCTTCACTTTTCTTTGCTTA
GGATAGGTTGCAGATTCTATTGCCCACTTGGGATTTAACATAGTAAATGT
ATTGTATGAGAGAAATCACTTTACACCttaatttttaagcaaaagtaAAG
ACAGGATAAGACTTCACTGTGGATTTGAAACTAAAACAATGACGCtatta
acaaaaataatttgatttggGAGTtacaagattttcaaaagaagaTCCTT
TTTGACCCAGTGTTTGAATTTGCTTAAAAATTAGGAAGCCTTTTGACGCT
AATTACCTGTGTCTACGACCTTAGCACGCTCTAATTTGAACGTCTTTAGT
ATGTCAGGTTTTGAACTCATAAAGGGAAGCTATAAGGTTCTCTGGCAAAC
TTATCATAGAAATATCCGGCTCTGTTCGGTGTAAGTTACTTGGAATCACA
ATGAACATCATTTCGACACCTAGGTATTTACAAACAAACTGTCTCATTGG
CTTTAAAAAAACCCGAAAGGGTTTCAAGTTAAATCTCTATTGTTTCCAAC
CTTGAAAACATTAACCGCTGTTATTCATctacactcattttgttttataa
gcataacgtttataagcatactgaagctcaaatttctagaaaaattaagc
atatgctaagcatgccttgaggctcagccaaagaaatttttagaatcata
attaccaaaacttcagaaaataacagaagaaagaatatatcatatatcat
atggtaaacattcgaaaacaatagaatgtcttcatttctctCAAGATTAA
AGAGAGGGGAAAATGCGCGAAAAATCTTACCCCCccccttcataattttt
ttaccaagcatagggttaagcatagtcgaggctcaaaattgagctttact
taagcatattgagcttcagccgaaatttagcgtatgcttataaaacaaaa
tgagtgtatgTCCTTTCCTGTAGCCAAAGGGACATTCTTGCTATTGCTAG
ATAAGCATCATTCTGATGATGTAGTGTTCGATTAcgtcatttataaaatc
aatcaaaaattcCTGTAATGGTTTCaaggaagaaaaattttattgagGAA
ATACTTTTAATCGAACAAGTCAACAGTCAGACTCTAAGAGAAGAGGAAGC
GATAGGAAAGCTTATAATTTGTTTATAAAGATTCGAGTAATTCGATGAGC
GAAATTTCTTGGCGACTTTATTTGCTTCTCATTTTTAAGGATCAAATAAT
AGTTTTTTAGAAGAGGTCATTTTTCCCAGAAAATAACATCGTGTAGAGAA
TAACATTTGAAGATATTCCCATACGGGTTCCCTTTACGCTTTGAAAGTAA
CTTTTGTCCATGCCTCCACGTTTCAAACTTTTCTGATACTCCCCGCATGG
CACGAATTCACTCTACAGgccatggctccgtaagagaatctgccaAGGTT
TTAATCCCATTTGGGATGAATACTATATTGACCTTTTGAGCGTGCTGATT
GGCTCAAAATTGCACCAAAATCAACTGTTAATAAATAGTACATACATAAA
CATAAGAACCCAgtcactttcgctttcgctttcaAGAAAAAGTTGACGCG
CTTCTGAATGTTTTGGCTGAGCAACCAAACCATAACCCTTTGAATAAGAA
CGGGGTATGCGTCAGAATGGACGATCTGTTATCAGATTAAGTTTCAACCA
TGTAAAGGGCTAGAAATTTACGAAGATCtgttttcgagttaaaaaaaact
aaactcaGGAAAGATTGTTGTCCATGATTTCCGTTGTTTTACTCCATTCC
ACTCCATTCCGTCTGGTGTCATAAATATTCTGTAGATTTTTTGTTAGAAG
AATTTTAATCACATCTTTAAAAACGagaatacaataaaaaaagagcGCGC
GCTTCGATACGGGAAAAGATCTAAAgtaattagaattttttattgtttgt
acTAGATTAGCCGTTCAGATTAGAAAagttcatttttagttttcttttgt
ATTGTCTGTCTCTCTATCTCGTGAatcgttgtttttttattcaaataggt
gatcgaaacaaaaaatattcataatgAATAGTAAACCTTGGCGAGGAGGT
CGAGGTTCAAGAAGGATGTCTACTGAGGATTCGACTGAGGATTTGATCTC
CAAACAGAATGATAGTGGTGATAGACAACGTTTAAATATTGATGATAATG
ATACATCTATTGATATCAAAATCCCAAGAGACAATACGTATAATCGACCG
TGGCGTAAGAAAACCGTTAACGTATCGTTCCTGGTTTTATCGATTGTGTT
TTTATTAATAGCCGTTGTGTTTATATGTTTATATTTccatcaaaaagatt
tattagACTTTTACAAGAATAAGGAGAAGTCGTCGTCGTCGCACGTTAAG
CCGACGCATGCACCGAACTGTACGGACAATGTTTGCGTGACGCCGGGCTG
CGTTGAAGCGGCTGCTTTTATGCAGGCTGCCATGGACACTACGATAAATC
CGTGTGacgatttttatttatattcgtGCGCCGGATGGATAAAACGTAAC
CCGATTCCGGACGGCGAGTCGGCTTGGGATACGATATCGGTGGTAATGAA
GCGTAACCAACGTATACTTAAAGACATTTTAGAAGATCCACGCGTTAAGA
AGGCGACAGACGTTACTAGCGTTGCCGAACACAACGCATATAAAATCTTC
CGTAGCTGTAAGAACTTGAAACGTATAAATAAACAGGGTATACAGCCTCT
CGTATCTCTAATGAACGACGTTACAAATTTCGTCACGCTAAACTCTACAG
ACACGTTACGGCATAAGACTTTGATGAGTTTGTTCACAACCCTTTACAAA
CAAACTCGTATGCAACCGTTCTTCAGTATCTCAGTCGGTCATGATGATAA
AGACTcttccaaaaatattttacaggTAATTAACATTTTGGTAAAAATCT
ACTTTGTCTAAACAGTCGTAAAAGGCTTTATCTTAGAAAAAGGTCTTTCA
AAATACTTTAATCCTAATTTTACTGCTTTTGGGTATTTTCACCACTTCAC
CAAGAGCTGTACAACTTTCCATTATAACGTTTGTTCTAATAATAATACTT
ACGTTTTGGCTTTAATTTTGGACTTGCCAatctttttgaacttttgagaA
CTTAATCAACCATTGTTTCTCTTAAACCTTCGAGGATCTTATAGCTTGCG
ATCTGTGCAatttttaaagtcgaaaaatgtcTCTCTCTCTTAATAGTTTT
ACCAATCTGGTATCACAATGGCGCCTTACATTTATGACGAAAAAACGAAC
CAAAGTAAACAGATCGTTGAAGAATCCATCAAATATATGGTAGCATTGGG
ATCAAAGATTGATCATGATTTCGCGACGGTGGAAGAACTCCGCGAGATGG
CCAACGATGTGTATGAATTTGAGAAGAGCTTGAAACAGGTaagatttgtt
tattttgcatcgaaattttgattttctctgACATTGGCCTATTCTTTTTA
GTAATTTATGAGTATCGTCCCTAGGGTAGTTCTCCGCTCCGCTTCATATT
GCTAAGCCTAATGATTCACTACACTGGGAATCATGTCTGCACCCAATAGC
ATTTCATCGAGTCTCTATAGGAAATTGTTTTTCTGTTAGAATCGTCCCTA
GGGTAGTTCTCCGTTCCGCTTCATATTGCTAAGCCTAATGATTCACTACA
CTGGGAATCATGTTTGCATCCAATAGCATTTCATCGAGTCTCTATAGGAA
ATTGTTTTTCTGTGAGCATCGTACCTAGGGTAGTCCTCCGTTTTGCTTCA
TAATCTTAAACTTGCTGAAGCACTACATTGGGAGTCATGTTAGCATTTCT
ACGAGTCTCTAcagaaaattgtatttttccCATATCATAGTTGTTGACTT
TGCAAAGTTGTTTTGTCGAAGGTGTACAGTATCATTATCTCGTAATTAGT
ATGCTAAATAGAACGGATTATCCTTCGTTCATCTGCGAGGAGTCTGTCAG
CTCATCCCTTCAAATTGTCAGGTTGTCTAAAATCGTTGTTTACGCGTTTA
TGAGAATATACAGCTggtgctctctaattcgacattcataattcgatacg
ctccataattccccttaaaaatcaaatcagagagcgtcaactatGTTATT
TTACTTAAGCCGTGACACATTCTGCTTTTTAAAGTGACTTGCTGCTCGCA
TGCGGCATCTATAAAGAGGAATAGGCCCCTAGTCAGCCCTGTTTTTATCA
AATTCAATGTTCTTTTACAATGGTTAATAAGAGAGTTCTGTAAACTGGAG
GTGCTATCAGTCATAACTTAGGCTGGAAATCACCACTTTTTTTAGTGTCA
AAAACATGAAACTTTCGTTAACTCTGCTTGTAGAAACTTGGCTCGGCTCC
TGGATATAAATATCACTTTGCACTGGAATACTAGACATCAATCAAAGTTA
CATAGCGCAACCCTCCCCCCAAATGTCACCCAAAAAATTACAAACGTAAA
CTGGGAGCTAAAATACAGCCAAATATTTGGGTGGGGGGCTGGAATTTTAA
TGGCAAGGCTGGGGCTGACTATTTcttctattatttttctttatattacc
acatttttatccaaaaacctttcattttacagtctattaattctgtttgt
tttcacttatgtctaccattttgaattaaCTATTATAGTCAATAGAATAT
AAATGTGATTTTCCTAAAAACGATATTAAATCAACACATGTTTTATACTA
GATATAGGACTAGAGctgcttaaaaaacttttaatatttGGGGGACCTAA
ATCTTTGCGGGGGTCCTATTTTTTTGCCTGGGGCCTAGACATGGGGTGAC
CCTATGAAGTTAAATATTCTTGTTAAGCATTTCATGTACAACATTTAACT
CCGTTGTCAGTGACATTATGTACATAGAGACAAATTATGAGATCACAAGC
TGACTCATCCGTCAATCAAAAGACAGTGATAAGCATCTCAAATACCTTCC
TTTATCACGTCTcattaagagtaattaagactTATTAAGCCTGATTAATG
ATGTGCCATATGAATTCACTATAAATATATCTAGTAGTTCTGgaaataag
tatttctttaacTGGGAAGGCTATTTTTAACGTGTTTTCATATTTTAAAT
TAACTTTGTCAGAGACCCTCCTTTTTTCGAGTAAACAACCTTTTTTAAtc
ttttggctgaaatttcattaattcCGAGTGTATAGGTCCTTCATTTCGAC
TATTTGTGTACATAAAATAGTGCCACGCGACCCCTTCTTTTTAAGATCGC
GTCGAGAATACCTTTGATCCCTTTTTGTAAAACTACGGACTTTTATATTA
TGAAAGAATTTTCCCACCGGCCTTGAAACGAGGAAGTGTCTGAGAACGTT
TGtgcaattttgaaaagattgaaaagagctcaaaaattaaattcaaatgc
AATTAACTGCCCATTGAAAACAGACATAGAATTAATACACAAATCATAAA
ATGAATATTATGATCCTCCTACTTCCATTTTGTTTCGAGAtttcttcaat
ttcattttcaacaaATCTTTCTACAGATATACGTTCCACCTGAGAAATTG
GTGACCATCGACCAAATGTATCATAAAACGACACTCAAGGAGNN Coding sequence (CDS) from alignment at scaffold_339:7558..16801+ >TCONS_00060229 ID=TCONS_00060229|Name=TCONS_00060229|organism=Clytia hemisphaerica|type=CDS|length=3330bp|location=Sequence derived from alignment at scaffold_339:7558..16801+ (Clytia hemisphaerica)
atgAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAAGGATGTCTAC
TGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGATAGTGGTGATA
GACAACGTTTAAATATTGATGATAATGATACATCTATTGATATCAAAATC
CCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAACCGTTAACGT
ATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCCGTTGTGTTTA
TATGTTTATATTTccatcaaaaagatttattagACTTTTACAAGAATAAG
GAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCACCGAACTGTAC
GGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCTGCTTTTATGC
AGGCTGCCATGGACACTACGATAAATCCGTGTGacgatttttatttatat
tcgtGCGCCGGATGGATAAAACGTAACCCGATTCCGGACGGCGAGTCGGC
TTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGTATACTTAAAG
ACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGTTACTAGCGTT
GCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGAACTTGAAACG
TATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATGAACGACGTTA
CAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCATAAGACTTTG
ATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGCAACCGTTCTT
CAGTATCTCAGTCGGTCATGATGATAAAGACTcttccaaaaatattttac
agTTTTACCAATCTGGTATCACAATGGCGCCTTACATTTATGACGAAAAA
ACGAACCAAAGTAAACAGATCGTTGAAGAATCCATCAAATATATGGTAGC
ATTGGGATCAAAGATTGATCATGATTTCGCGACGGTGGAAGAACTCCGCG
AGATGGCCAACGATGTGTATGAATTTGAGAAGAGCTTGAAACAGATATAC
GTTCCACCTGAGAAATTGGTGACCATCGACCAAATGTATCATAAAACGAC
ACTCAAGGAGatgAATAGTAAACCTTGGCGAGGAGGTCGAGGTTCAAGAA
GGATGTCTACTGAGGATTCGACTGAGGATTTGATCTCCAAACAGAATGAT
AGTGGTGATAGACAACGTTTAAATATTGATGATAATGATACATCTATTGA
TATCAAAATCCCAAGAGACAATACGTATAATCGACCGTGGCGTAAGAAAA
CCGTTAACGTATCGTTCCTGGTTTTATCGATTGTGTTTTTATTAATAGCC
GTTGTGTTTATATGTTTATATTTccatcaaaaagatttattagACTTTTA
CAAGAATAAGGAGAAGTCGTCGTCGTCGCACGTTAAGCCGACGCATGCAC
CGAACTGTACGGACAATGTTTGCGTGACGCCGGGCTGCGTTGAAGCGGCT
GCTTTTATGCAGGCTGCCATGGACACTACGATAAATCCGTGTGacgattt
ttatttatattcgtGCGCCGGATGGATAAAACGTAACCCGATTCCGGACG
GCGAGTCGGCTTGGGATACGATATCGGTGGTAATGAAGCGTAACCAACGT
ATACTTAAAGACATTTTAGAAGATCCACGCGTTAAGAAGGCGACAGACGT
TACTAGCGTTGCCGAACACAACGCATATAAAATCTTCCGTAGCTGTAAGA
ACTTGAAACGTATAAATAAACAGGGTATACAGCCTCTCGTATCTCTAATG
AACGACGTTACAAATTTCGTCACGCTAAACTCTACAGACACGTTACGGCA
TAAGACTTTGATGAGTTTGTTCACAACCCTTTACAAACAAACTCGTATGC
AACCGTTCTTCAGTATCTCAGTCGGTCATGATGATAAAGACTcttccaaa
aatattttacagTTTTACCAATCTGGTATCACAATGGCGCCTTACATTTA
TGACGAAAAAACGAACCAAAGTAAACAGATCGTTGAAGAATCCATCAAAT
ATATGGTAGCATTGGGATCAAAGATTGATCATGATTTCGCGACGGTGGAA
GAACTCCGCGAGATGGCCAACGATGTGTATGAATTTGAGAAGAGCTTGAA
ACAGATATACGTTCCACCTGAGAAATTGGTGACCATCGACCAAATGTATC
ATAAAACGACACTCAAGGAGatgAATAGTAAACCTTGGCGAGGAGGTCGA
GGTTCAAGAAGGATGTCTACTGAGGATTCGACTGAGGATTTGATCTCCAA
ACAGAATGATAGTGGTGATAGACAACGTTTAAATATTGATGATAATGATA
CATCTATTGATATCAAAATCCCAAGAGACAATACGTATAATCGACCGTGG
CGTAAGAAAACCGTTAACGTATCGTTCCTGGTTTTATCGATTGTGTTTTT
ATTAATAGCCGTTGTGTTTATATGTTTATATTTccatcaaaaagatttat
tagACTTTTACAAGAATAAGGAGAAGTCGTCGTCGTCGCACGTTAAGCCG
ACGCATGCACCGAACTGTACGGACAATGTTTGCGTGACGCCGGGCTGCGT
TGAAGCGGCTGCTTTTATGCAGGCTGCCATGGACACTACGATAAATCCGT
GTGacgatttttatttatattcgtGCGCCGGATGGATAAAACGTAACCCG
ATTCCGGACGGCGAGTCGGCTTGGGATACGATATCGGTGGTAATGAAGCG
TAACCAACGTATACTTAAAGACATTTTAGAAGATCCACGCGTTAAGAAGG
CGACAGACGTTACTAGCGTTGCCGAACACAACGCATATAAAATCTTCCGT
AGCTGTAAGAACTTGAAACGTATAAATAAACAGGGTATACAGCCTCTCGT
ATCTCTAATGAACGACGTTACAAATTTCGTCACGCTAAACTCTACAGACA
CGTTACGGCATAAGACTTTGATGAGTTTGTTCACAACCCTTTACAAACAA
ACTCGTATGCAACCGTTCTTCAGTATCTCAGTCGGTCATGATGATAAAGA
CTcttccaaaaatattttacagTTTTACCAATCTGGTATCACAATGGCGC
CTTACATTTATGACGAAAAAACGAACCAAAGTAAACAGATCGTTGAAGAA
TCCATCAAATATATGGTAGCATTGGGATCAAAGATTGATCATGATTTCGC
GACGGTGGAAGAACTCCGCGAGATGGCCAACGATGTGTATGAATTTGAGA
AGAGCTTGAAACAGATATACGTTCCACCTGAGAAATTGGTGACCATCGAC
CAAATGTATCATAAAACGACACTCAAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060229-exon-scaffold_339-1491911889:7558..7586 | TCONS_00060229-exon-scaffold_339-1491911889:7558..7586 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1510915933:7558..7586 | TCONS_00060229-exon-scaffold_339-1510915933:7558..7586 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1575043694:7558..7586 | TCONS_00060229-exon-scaffold_339-1575043694:7558..7586 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1491911889:13206..14082 | TCONS_00060229-exon-scaffold_339-1491911889:13206..14082 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1510915933:13206..14082 | TCONS_00060229-exon-scaffold_339-1510915933:13206..14082 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1575043694:13206..14082 | TCONS_00060229-exon-scaffold_339-1575043694:13206..14082 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1491911889:14404..14595 | TCONS_00060229-exon-scaffold_339-1491911889:14404..14595 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1510915933:14404..14595 | TCONS_00060229-exon-scaffold_339-1510915933:14404..14595 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1575043694:14404..14595 | TCONS_00060229-exon-scaffold_339-1575043694:14404..14595 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1491911889:16734..16801 | TCONS_00060229-exon-scaffold_339-1491911889:16734..16801 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1510915933:16734..16801 | TCONS_00060229-exon-scaffold_339-1510915933:16734..16801 | Clytia hemisphaerica | exon |
| TCONS_00060229-exon-scaffold_339-1575043694:16734..16801 | TCONS_00060229-exon-scaffold_339-1575043694:16734..16801 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:7558..16801 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008753 | Peptidase_M13_N |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
Blast
BLAST of TCONS_00060229 vs. Swiss-Prot (Human)
Match: ECE1 (Endothelin-converting enzyme 1 OS=Homo sapiens GN=ECE1 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.535e-39 Identity = 81/254 (31.89%), Postives = 131/254 (51.57%), Query Frame = 1
Query: 403 TDNVCVTPGCVEAAAFMQAAMDTTINPCDDFYLYSCAGWIKRNPIPDGESAWDTISVVMKRNQRILKDILEDPRVKKATDVTSVAEHNAYKIFRSCKNLKRINKQGIQPLVSLMNDVTNFVTLNSTDTLRHKTLMSLFTTLYKQTRMQPFFSISVGHDDKDSSKNILQFYQSGITMAPYIYDEKTNQSKQIVEESIKYMVALGSKIDHDFATVEELREMANDVYEFEKSLKQIYVPPEKLVTIDQMYHKTTLKE 1164
+ +VC++ CV + + ++MD T++PC DF+ Y+C GWIK NP+PDG S W T S + + NQ I+K +LE+ +T S AE A +R+C N RI + +PL+ L+ + + N T + R PFFS+ V D K+S+ N++Q QSG+ + Y ++++++ + YMV LG + E +R + +FE +L I +P EK + +YHK T E
Sbjct: 95 SPSVCLSEACVSVTSSILSSMDPTVDPCHDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAIIKHLLEN-----STASVSEAERKAQVYYRACMNETRIEELRAKPLMELIERLGGW---NITGPWAKDNFQDTLQVVTAHYRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNKTENEKVLTGYLNYMVQLGKLLGG--GDEEAIRPQMQQILDFETALANITIPQEKRRDEELIYHKVTAAE 338
The following BLAST results are available for this feature:
|
