TCONS_00060169 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060169
Unique Name	TCONS_00060169
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1677

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_336:87830..101094-
coding sequence from alignment at scaffold_336:87830..101094-

transcript sequence

>TCONS_00060169 ID=TCONS_00060169|Name=TCONS_00060169|organism=Clytia hemisphaerica|type=transcript|length=1677bp
CAACAATGTACTCAAAACTCTACAGCAATCTGTAATATGCTGTGGTAATG
AAGATTTTGATGATCTGGTGTCTAAGAAGCTAGGGGATTTGAATGActtt
caatttttatcaattgAAAACACAAGTCATTTAGAGACATCTGATGGCAA
AACTATGTCTGACATGAAGATAATCAGACATGAAAATTGTGACATCCTTA
TTGACTCAAGTAAagGAGCTAGATGTGAAACTTGTACTCACTATCGAAGT
GTCCTACATGCAATGAGATCAAGAAAAAGACGATCTGATGAAGGTGTTAT
GTCACCAAACACCAACAACAGATGGATGAACCGCGAACATTTAATTAATA
AACTTGAATTGTACCAAAAAGATAGAGCTAACCTTGCCAGGAGACTTAAC
CagacaaaaaaatgtcagaaaacatgtttttgaagacGGGGTGGCTTTAG
ATAAAGTTTCGGAGGACGTTTGCAGCGCTGTTCTTCAGAAAAGTGACAAT
CCTTTTAGCGAGGACAGTCCACCACACTTGTTGCGGAGTCAGCAAAAGAA
GTTTGCCATGACCGATCCGAGTGGAATGAGATGGCACCCCCTTATTGTTA
GATGGAGTTTGACCATTTATTTGAAATCACCTGCAACCTACAAACACATC
CAATCAGGACCAAACTATATTACTAAAGTACATCAATTTCACAACTCCCG
GATGCGGTTTTAATCCAGACATTATCAAGCGTCTCTTTGACAAAGTTATA
GTGACTTGCAAACAAGAATTTCAACGGAATGTTGGCTTAGTTTTCGATGA
GATGAAAATTAAAAGTGGTTTGGTTTTTGATAAATTAACAGGCCGATTGG
TTGGATTCACTGAAATGGGTGATATGAACGATGAGCTTGAGCACTTCGAG
AGGTTTTGCTCTGAGGATACTATGAAAGAAAAATCTGTTGCTAAATATTT
TATGGTTTTCATGGTCCGTGGCTTATGTTCAGGTCTTGAGTACGTCTTTG
GACATTTTGCTAGTGAGGGCTTCACATCTGATCAAATCTTCCACTGTGCA
CACGAAGCGATTGGTATCCTTGAAAGTATAGGATTGAAAGTACGGGCTGT
AACAGCTGATGGAGCAAGTCCAAATAGAAAATACTTTAAGTTACACAAGC
TTCCAGAAAATACCAAGGAAACCAATTTATTTCATGGAAATGTTTACTGG
GCTTACAGCCCTTGGGCATTCTCATCCAAAAGAAAGATCTACTTTTTTTC
TGATCCACCCCATCTAATGAAAACTACACGCAACAACCTGGAAAATCCGC
ATGCAAACAAAAAAAGCAGGAATGTAGTTTTCGATGGAAAAGAGATGGGC
TGGCACCAAATCCTGGACTTGTACGACTGGGATCTTGGGCCCTCGCGCTA
CTGTTTCGGCATCAGATTTGGTCATAAGTTGAGGCATGAGCATATCAAGT
TGGACCCCAGAAGCAGGATGCGTGTTAATCTAGCAGCTCAAGTTTTAAGC
TGCACTGTTGCTGACATTGCTGGATGAGCAAAAAGCATCTGGTACTGAAT
CGTTATCAAAATTTGTTCGTTTAATGGACAcattttttgattgtttgaat
gTTTCCAGGCTAACAAACACATCAGGAAAGAAAGCCAAGGATAAATATAC
TGGTTCAAAAATGATTGGAGGTTTGAG

Run BLAST on NCBI

protein sequence of TCONS_00060169-protein

>TCONS_00060169-protein ID=TCONS_00060169-protein|Name=TCONS_00060169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MKIKSGLVFDKLTGRLVGFTEMGDMNDELEHFERFCSEDTMKEKSVAKYF
MVFMVRGLCSGLEYVFGHFASEGFTSDQIFHCAHEAIGILESIGLKVRAV
TADGASPNRKYFKLHKLPENTKETNLFHGNVYWAYSPWAFSSKRKIYFFS
DPPHLMKTTRNNLENPHANKKSRNVVFDGKEMGWHQILDLYDWDLGPSRY
CFGIRFGHKLRHEHIKLDPRSRMRVNLAAQVLSCTVADIAG

Run BLAST on NCBI

transcript from alignment at scaffold_336:87830..101094-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060169 ID=TCONS_00060169|Name=TCONS_00060169|organism=Clytia hemisphaerica|type=transcript|length=13265bp|location=Sequence derived from alignment at scaffold_336:87830..101094- (Clytia hemisphaerica)
CAACAATGTACTCAAAACTCTACAGCAATCTGTAATATGCTGTGGTAATG
AAGATTTTGATGATCTGGTGTCTAAGAAGCTAGGGGATTTGAATGACTTT
CAATTTTTATCAATTGAAAACACAAGTCATTTAGAGACATCTGATGGCAA
AACTATGTCTGACATGAAGATAATCAGACATGAAAATTGTGACATCCTTA
TTGACTCAAGTAAAGGTTTGGAAAATATTTTTTTCTTATTTCTATAAACT
CGTACAGTTTTGAGAAAACCGGAAGTCAAACTGCCAAGCCTTTTAAAAAC
ATTNCTTATTTCTATAAACTTGTACAGTTTTGAGAAAACCTGAAGTCAAA
CTGCCAAGCCTTTTAAAAACATTTTGTATATAATTGTATCTGCCTTCATT
AAACATATTTTAGCAAGAACTTTGTTACAATAAATTTTGGGCTGGCTTTC
CTGAAAACATGTTGTTGGCTATTTTTCTTGCCAATTATTTGAAAATTTAC
CCTTCCTGGACAAAAGTCATTCGTTGATTACTTTTTAGTGATTTTATTGT
AATTTTTAGAATGTTTGGATCTAAAATATACAAGGATAAAACTATAAAAT
ATGAAGGGAACAATGATGCCATAATCCATGGCTAATGGACAACGGTCCAA
GACAGTTCATGTTTCTGTAGCATCATACAGTTCATAAGAATACTAATGGG
CATTTCATAATGTCTCATACAGTTGATTCTCTCCAACCTCTATTGAATAG
TAATATTTTTGACACATTTCACTGATTACTCAAATAAACAGCAATCATCT
CGTTAAAAATTTCAAATTGATGTAGAAAAAAACGAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGAAAAT
TGACGAAGGTGCTTACGATTTCGCCTTGTGAGCCGGCCAGATCCATCAAC
CTTTAGGGTGTAGCTCTCGAATCCGTGAACTTCGACAACTGTTCCAGAGC
GGTCCCAACGTTTGGGGTAGTTGCCTGATTGATTCTGGATGTAGCAACGA
TTGCCGAGTTGGAGTGATGGAAGTTTGCGAGTCTTTTCGTCCAGTTTATC
GATCGAATGAAAGAATCGTTCCTTCATAGCTGATTCCTTCTGTGCCCATG
CATCCCGCCACAAGGGACGAATGTGCTGGTTGTTGAACTTAACGAGACGA
TTCGAGAAGGAAAAGGCATCTCTGATTGGTCTGCCGAAGACAATTTGGGC
TGGGGAGATGTTGCAATCTGGGTCTGGCGTGTTTCTCATCTGCATCATAG
CGCGTAGAAACTTGTCTGTGTCGAGTGATCCTGAGGGACCTGTGTTGGCA
CGAAGGAGACGCTTGGTAGATTTAACTGCTACTTCGGCACGTCCGTTTGA
TTGAGGGAAGTAGGCAGAAGACAATCTGTGAGATACACCCCAGCGTTTGA
AGAATTCGGCAGTAGCAGAGGCGATAAACTCAGGTCCACCGTCGCTGGTG
ATTTCTTCGGGAACTCCAAATCGAGAGAAGTAGTTTCTTAGGCACGATAT
CAGACCAGCAGCGCCTGATTGCGGTGAGCCATGCGGGGAGGTGAAAACGT
CGCACCACGCAGACAAACGATCTCCAACGACGAGGTAATGTTGGCCCGCA
CTTTGGAAGAAGTCAGCAAACACCTTCTCGAACGGTGTTGATGGTGGTGG
AGAAGGCACGACAGTTGAAGCTGGTTGTGATGGGGCGTTGACGATGCATT
CCCGACAATTCTTTCTCGTTCGTTCAATGTCAGCTGTCATTCCTGGCCAG
AACACGATTGCACGAGCGCGAGATCCCATCATTGTTACACCTTGGTGGGC
AGCGTGAAGTGCGTCGAGGACAGCAGGGCGAAGGGAGGATGGGATGACAG
CACGATCATCGTAAATGACTACGCCATCTGACACGTGGAGACTTTCGCGG
TATTGCCAAAATTGTGAGATGGTAGGAGAATCGCGGCACTCTGGTGGGAA
TCCGTCGTGAATGGCTTCAATCAGGGACCGCATGGCATTGTCTTTCTGGG
TCTCCTTGACAAGTTGATCCCAGGTGATGGAGGTGACTGTATTGGTTTGG
CGTTGAATGGCAGCAAGAACCAACGATTCAGTTAGGTCTTCTTGGTCGTN
AGGGAGGTGAAAACGTCGCACCACGCGGACAAACGATCTCCAACGACGAG
GTAATGTTGGCCCGCACTTTGGAAGAAGTCAGCAAACACCTTCTCGAACG
GTGTTGATGGTGGTGGAGAAGGCACGACAGTTGAAGCTGGTTGTGATGGG
GCGTTGACGATGCATTCCCGACAATTCTTTCTCGTTCGTTCAATGTCAGC
TGTCATTCCTGGCCAGAACACGATTGCACGAGCGCGAGATCCCATCATTG
TTACACCTTGGTGGGCAGCGTGAAGTGCGTCGAGGACAGCAGGGCGAAGG
GAGGATGGGATGACAGCACGATCATCGTAAATGACTACGCCATCTGACAC
GTGGAGACTTTCGCGGTATTGCCAAAATTGTGAGATGGTAGGAGAATCGC
GGCACTCTGGTGGGAATCCGTCATGGATGGCTTCAATCAGGGACCGCATG
GCATTGTCTTTCTGGGTCTCCTCGACAAGTTGATCCCAGGTGATGGAGGC
GACTGTATTGGTTTGGCGTTGAATGGCAGCAAGAACCAACGATTCAGTTA
GGTCTTCTTGGTCGTCTGATGGGGATGGGTAGCGGGATGTTGCGTCACAA
GCTGGGTTGGTTTTTCCCGGAAGATGGATGATTTTGAAATACCAGGGAAG
TGTTCTTTGTTTCAACCGAAGGAGTCTAGTGTTCCTGATCTCGTCAAGCC
TCTTGTCACCATATATCTTCACGAGAGGTTTGTGATCGGTAATGACTGTC
AAGTCGGGACATCCGAGGGTAAAGAATTTGGATTGCTCAAGACCCCACGT
TATGGCAAGGGCCTCCCCTTCAATTGCGACATAATGTTTCTCAGCCGGGG
AGAGAAATCTTGAACTTGCGAGTGTGATACGCCAGCCACTGGGACAACAG
TCGGGATCGGTGACCTGACAAGAACAGTGTTTCTGCAGCAGGAGGTATCC
AATTCCTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGCGAAAATTGACGAAGGTGCTTACGATTTCGCCTTGTGAGC
CGGCCAGATCCATCAACCTTTAGGGTGTAGCTCTCGAATCCGTGAACTTC
GACAACTGTTCCAGAGCGGTCCCAACGTTTGGGGTAGTTGCCTGATTGAT
TCTGGATGTAGCAACGATTGCCGAGTTGGAGTGATGGAAGTTTGCGAGTC
TTTTCGTCCAGTTTATCGATCGAATGAAAGAATCGTTCCTTCATAGCTGA
TTCCTTCTGTGCCCATGCATCCCGCCACAAGGGACGAATGTGCTGGTTGT
TGAACTTAACGAGACGATTCGAGAAGGAAAAGGCATCTCTGATTGGTCTG
CCGAAGACAATTTGGGCTGGAGAGATGTTGCAATCTGGGTCTGGCGTGTT
TCTCATCTGCATCATAGCGCGTAGAAACTTGTCTGTGTCGAGTGATCCTG
AGGGACCTGTGTTGGCCCGAAGGAGACGCTTGGTAGATTTAACTGCTACT
TCGGCACGTCCGTTTGATTGAGGGAAGTAGGCAGAAGACAATCTGTGAGA
TACACCCCAGCGTTTGAAGAATTCGGCAGTAGCAGAGGCGATAAACTCAG
GTCCACCGTCGCTGGTGATTTCTTCGGGAACTCCAAATCGAGAGAAGTAG
TTTCTTAGGCACGATATCAGACCAGCAGCGCCTGATTGCGGTGAGCCATG
CGGGGAGGTGAAAACGTCGCACCACGCAGACAAACGATCTCCAACGACGA
GGTAATGTTGGCCCGCACTTTGGAAGAAGTCAGCAAACACCTTCTCGAAC
GGTGTTGATGGTGGTGGAGAAGGCACGACAGTTGAAGCTGGTTGTGATGG
GGCGTTGACGATGCATTCCCGACAATTCTTTCTCGTTCGTTCAATGTCAG
CTGTCATTCCTGGCCAGAACACGATTGCACGAGCGCGAGATCCCATCATT
GTTACACCTTGGTGGGCAGCGTGAAGTGCGTCGAGGACAGCAGGGCGAAG
GGAGGATGGGATGACAGCACGATCATCGTAAATGACTACGCCATCTGACA
CGTGGAGACTTTCGCGGTATTGCCAAAATTGTGAGATGGTAGGAGAATCG
CGGCACTCTGGTGGGAATCCGTCATGGATGGCTTCAATCAGGGACCGCAT
GGCATTGTCTTTCTGGGTCTCCTCGACAAGTTGATCCCAGGTGATGGAGG
CGACTGTATTGGTTTGGCGTTGAATGGCAGCAAGAACCAACGATTCAGTT
AGGTCTTCTTGGTCGTCTGATGGGGATGGGTAGCGGGATGTTGCGTCACA
AGCTGGGTTGGTTTTTCCCGGAAGATGGATGATTTTGAAATACCAGGGAA
GTGTTCTTTGTTTCAACCGAAGGAGTCTAGTGTTCCTGATCTCGTCAAGC
CTCTTGTCACCATATATCTTCACGAGAGGTTTGTGATCGGTAATGACTGT
CAAGTCGGGACATCCGAGGGTGAAGAATTTGGATTGCTCGAGACCCCACG
TTATGGCAAGGGCCTCCCCTTCAATTGCGACATAATGTTTCTCAGCCGGG
GAGAGAAATCTTGAACTTGCGAGTGTAATACGCCAGCCACTGGGACAACA
GTCGGGATCGGTGACCTGGCAAGAACAGTGTTTCTGCAGCAGGAGGTATC
CAATTCCTTTCTTTGACCAGTCTGTTCGGAGACCAGTGGGGCGTCCAAGG
TCAAATATTTCAACACCCTCTTTGATTGCATCGATAATTGCTTCTTTGGA
CAATTTGAAGGCTGTGTCAAGCCCGTCATTCCACTCAAACGGTGTTCGTG
GGGAGAGGAACTTTCGGAATGGTTCCATGTGGTCTCGGAGTTGGGCGTAG
TTGGACACCTGATTCACTAACCCAAACCAGCTACGAATGTCAGTTGTCGA
TGAAGGTGTTGGAAAATTGCGAATGGCGTTGAAATATTTTGGAAGAGGAT
CAATCCTGTCTGGCGTAATACGAAAGCCAGCAAAATCAACCTGCTTCTGT
GCGAATTGGAATTTATCAGGATTAGCGACAATACCCGAGTTTCCAATGAG
AGTCAATAAGTCTATGGTTCGCCACCAATGTTCAGTTAAATCCTCGTCAT
GGTGAAGGGTGTCGTCAACAATACGTTCTTTGCGATGGAAGTCTGTCAGG
ATGGTGTCGAAACGTCTGTTGTAGCCATCTCCTGAAGATAAGAAGCCTTG
TGGTGCACGCTTGTAACGAAACCGGCCAATAGGTGTGATAAATGTTGTTA
AGTGGCGGTCAGATTGGCGCAAGGGAAGACTGTGATAGCCATTCCAAGCA
TCTATGACGGTTTTCCAGGTATTTCGAGGAATGCGTCGTACTATATGAAA
AGGTTGTTCGGAATTGTGGGTCTCCCTCTTACAAAACTTATTCAGTGGTG
ATAGGTCGACGGTTCTACGAGGGGAGCCATCGTGTTTTCTTGCGACGACC
ATGTGGTGACACCAGTCCGATGGTTCTCCCAATGGCACCGGCTCGATTAC
GTCAAGGGCAACATCGCGAGCAAGGTCTGCGTATACTTTGTCTTTCCAGT
GGATTGGTACAGGTATGGCTTTGTGATGGGCGACTGGTACCGCATCATCT
TTGATGTGGATCTCGACGGGAGGACCGTCCATGCAAGGAAGCTGTTGGTG
TGGACAGGTGTTGAATGTAGAGCTCCAATAGTAGTCGAGGAGCCAATCAC
GCATGCGAGTGCTGTTCTCAGGGATGCAGGAAAAGGGCAGTTCTTTAGGG
CGGGAAGGTGGTGCAGTTCTTATGGGGCAGTCACAAATGCCCCCATCGCT
CTTGGTTGCACCACAGATTGATCCAACAGGTATGTTTGCGTTTGCCTGAG
GGGAAGAAGATGATTCTTTGCTGGTTGGATTGTTATTAAATGCTCCAACA
GTTGGAAAGTCACGATTAATTATACCGAGCAGAAGCATGGAGTCGTATGA
AAGGTATAAATGCTTAACATCGCGACTGACGTAAACCATCGAGCGGCAAG
ATACTTTGTTCCTGCTTTCCACTGCACCTGTCATTCTGGCACGGAAGACT
CCATCGATCCTAATCGGTGATTTGTTGGCTGCGTCCAGGGAGAGGGCGGC
AGGTGATAGATCTGACATCTCGAATCCAGCCTTCAGGAAGAGTTCTAGGG
ACCAGATATCGGATTGTGCGCCAGAGTCGGCTACAGCTTCGATATCGACA
CATGTAGCTTTCTGGTTGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGCAAGGTCTGCGTATACTTTGTCTTTCCAGTGGATTGGTACAGGTATGG
CTTTGTGATGGGCGACTGGTACCGCATCATCTTTGATGTGGATCTCGACG
GGAGGACCGTCCATGCAAGGAAGCTGTTGGTGTGGACAGGTGTTGAATGT
AGAGCTCCAATAGTAGTCGAGGAGCCAATCACGCATGCGAGTGCTGTTCT
CAGGGATGCAGGAAAAGGGCAGTTCTTTAGGGCGGGAAGGTGGTGCAGTT
CTTATGGGGCAGTCACAAATGCCCCCATCGCTCTTGGTTGCACCACAGAT
TGATCCAACAGGTATGTTTGCGTTTGCCTGAGGGGAAGAAGATGATTCTT
TGCTGGTTGGATTGTTATTAAATGCTCCAACAGTTGGAAAGTCACGATTA
ATTATACCGAGCAGAAGCATGGAGTCGTATGAAAGGTATAAATGCTTAAC
ATCGCGACTGACGTAAACCATCGAGCGGCAAGATACTTTGTTCCTGCTTT
CCACTGCACCTGTCATTCTGGCACGGAAGACTCCATCGATCCTAATCGGT
GATTTGTTGGCTGCGTCCAGGGAGAGGGCGGCAGGTGATAGATCTGACAT
CTCGAATCCAGCCTTCAGGAAGAGTTCTAGGGACCAGATATCGGATTGTG
CGCCAGAGGCTACAGCTTCTATATCGACACATGTAGCTTTCTGGTTGTCT
AAGGTAATGCGAAGGTTGACCGTTGGATGGGACATTACACGAGCTCGTCT
CCATGCTCCTTTGGTGAATATTTGATGCTCGAGTGGTATTGATGGCTTCG
AACGGGAGGTGGACGCAACCTTGGGTGGCGCTGGTAAGGGACCGTAGGTG
ATCGAAGAGATCTGGCCAAGTGGGTCGAAGGTACCGCTGATGGCGTTGGA
CTGACTGGTCTGGCGTCGTTGCTCATCTCTGTTTTTCTTCCAGCACAACT
CACACCGTGTGTGAGGTTTTTGGTTCCATCCTCTTGGTTTCTTCGTGAAT
ATGTTGAAGACTTTGTGGCAATCAGGGCAGCTAGCAGTCTTTGCTTTGTC
GATCTCGCTTGGAGAGGGCATACGGTTGCGACGACGTCCGTCAGTTGCTC
GTCTGTGGTCAGGTTGATTGCCTCGCCGATACGCTGATAACCCTGTGACT
GATGATATCGGGTTGGCGTTACGCGCGGTCTCTTTGTTCTCCACGAATGC
CATCACATCAGTTACAGGTTTCTCCTGGATGTCATCAGCACTCAGGGCGT
CGCGACGAATGTCAACATCTGCGATTCCGTTCAGCAGAACGTCCCTGATA
ACTTCGTCTGTGTAATATACTTCACCATTATAGGCGGTCTCACAGTTATT
ACATGAACCGTCGAATATTGTCTTAAATTCGCATGTCTCTGCTTTTCCTT
GAACCCTAGCGGCGAAGGTTCCGAAGGGCTCATCTGGATCCTGGCGCATA
GCTAACAGTTCAGAACGTACAACACCGAGTGCTACGGGAATCACTGCTAA
CTTCTTCAATGTCACGAGCGCCTCATCAAGCGCAAGGGTGGTAAAGTTAG
GTTTAGCTCTGAGCACAATGTTACCAAGCTGTTCCTCTGTGCATTCAAGG
AGCTGACCAGATGCAACTGCATTAGGTATGGAGGAACCAGTGCGATAAGT
CTCCCAACGTCGGGTGAATGCGTTCCAGTCCTCAGTGGTGGCGTTCATTT
GAAGCTTCGGACGCTCAAGCCTGGGAGCACGCATTGGTGCGGCACGGCCT
TGGAAGGCGTTGGTAGCGTGTGTATGGGAGTGCACATTCAATATAGCAGC
TGCACCAATCACGTCTACATCATCAGTCATGAAACCACAGTCAGGGATGG
GACACGAGAGTACAGTCATTGTGTCAATGATACAAAACACTCATCCAATA
ATGTGATGTTGATCCAAACATGGACAAAAGTCATTCGTTGATTACTTTTT
AGTGATTTTATTGTAATTTTTAGAATGTTTGGATCTAAAATATACAAGGA
TAAAACTATAAAATATGAAGGGAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAACCATGGCTAATGGACAACGGTCCAAGACAGTTCATGTTTCT
GTAGCATCATACAGTTCATAAGAATACTAATGGGCATTTCATAATGTCTC
ATACAGTTGATTACTCTCCACTTCCACTTACCAAAATGAGGTGTTCCTAA
ATGAGATTATATCCCTCAAAAGTATCCTTTTATTAAAAAGGTGTAACTAG
AGGATGCAGTATTTAAAATTTAAGAATGCGGGTTAATTGCTTTTTCAGGA
GCTAGATGTGAAACTTGTACTCACTATCGAAGTGTCCTACATGCAATGAG
ATCAAGAAAAAGACGATCTGATGAAGGTGTTATGTCACCAAACACCAACA
ACAGGTTATGATTTTCAGGTTTTGAATTTTAGTTTGAAAATTCAACGAAT
TACTTGTGACTGATAAATTATTTTGTTTCTTTACCATTCTTTTGAATTTT
CATAATTTAAAAATTGATAACGGAACAGAAAAGTACCCTAGTTTGAATGA
AATTTCCACGAATGTGACGATTATTGCTATGGTGTATTTAAAAATTGTTG
GCAGAATCATTTTATTTTGAATATCGAAAAGTATTTATTTTAAGTAGAAC
ATGTTTTGTTTTCAGATGGATGAACCGCGAACATTTAATTAATAAACTTG
AATTGTACCAAAAAGATAGAGCTAACCTTGCCAGGAGACTTAACCAGACA
AAAAAATGTCAGAAAACATGTTTTTGAAGACGGGGTGGCTTTAGATAAAG
TTTCGGAGGACGTTTGCAGCGCTGTTCTTCAGAAAAGTGACAATCCTTTT
AGCGAGGACAGTCCACCACACTTGTTGCGGAGTCAGCAAAAGAAGTTTGC
CATGACCGATCCGAGTGGAATGAGATGGCACCCCCTTATTGTTAGATGGA
GTTTGACCATTTATTTGAAATCACCTGCAACCTACAAACACATCCAATCA
GGACCAAACTATATTACTAAAGTACATCAATTTCACAACTCCCGGATGCG
GTTTTAATCCAGACATTATCAAGCGTCTCTTTGACAAAGTTATAGTGACT
TGCAAACAAGAATTTCAACGGAATGTTGGCTTAGTTTTCGATGAGATGAA
AATTAAAGTGAGTTAAAAAGTGTGATTTCTGAAATAAGTTTTTTGCTTTT
GACTAATTTTGAACATTTTTACTGAACTAATCTTTTGTCTATTTATGTCA
ACTTTCTACCAAGCCTTTCTATTCAATTCAGTAGTGTTTTTACAGATAAG
GTTTTTATTGTGTCTTTAGAGTGGTTTGGTTTTTGATAAATTAACAGGCC
GATTGGTTGGATTCACTGAAATGGGTGATATGAACGATGAGCTTGAGCAC
TTCGAGAGGTTTTGCTCTGAGGATACTATGAAAGAAAAATCTGTTGCTAA
ATATTTTATGGTTTTCATGGTCCGTGGCTTATGTTCAGGTCTTGAGTACG
TCTTTGGACATTTTGCTAGTGAGGGCTTCACATCTGATCAAATCTTCCAC
TGTGCACACGAAGCGATTGGTATCCTTGAAAGTATAGGATTGAAAGTACG
GGCTGTAACAGCTGATGGAGCAAGTCCAAATAGAAAATACTTTAAGTTAC
ACAAGCTTCCAGAAAATACCAAGGAAACCAATTTATTTCATGGAAATGTT
TACTGGGCTTACAGCCCTTGGGCATTCTCATCCAAAAGAAAGATCTACTT
TTTTTCTGATCCACCCCATCTAATGAAAACTACACGCAACAACCTGGAAA
ATCCGCATGCAAACAAAAAAAGCAGGAATGTAGTTGTAAATCTATTGATT
TTCTTTTTATTTTCCACTGCATTTATATTCAAACAACAAAATAGTACCCA
AAATCATGCCTCTAGTTACTCTGAAATTTATGTTTTTGAAATTATGGTGT
ATGTTGTTTAGTATGTATGTTGTCGTTTTATGTTTGTCTCTAAAAGTTTT
CATTTTGATAATTTAGTTCGATGGAAAAGAGATGGGCTGGCACCAAATCC
TGGACTTGTACGACTGGGATCTTGGGCCCTCGCGCTACTGTTTCGGCATC
AGATTTGGTCATAAGTTGAGGCATGAGCATATCAAGTTGGACCCCAGAAG
CAGGATGCGTGTTAATCTAGCAGCTCAAGTACAAACTGAATCATATTGTA
CATATTTGCATAAATAAACTTTCCCACAAGATATTACAGTCTTNGTCTAG
CAGCTCAAGTACAAAGTGAATCATATTGTACATATTTGCATAAATAAACT
TTCCCACAAGAAATTACAGTCTTGCAATACAGCTGTTAATCATTTTTAAG
AAAATAGACTAGATGATAAATATCACATAGGCAGTCAATACAAATTGTAA
AATTGACAACAGTAAAATGTTATAATTTTTTCAGATGTAGAACAATAGAC
ATGTTTTTGTTGATGTTAATTAGCATGGCTTTAACCCTATTCGTACTAGA
GGGGGGGGGCTCTTTCTGTTCGGAGGTCAAACTATTGCTAATAGCTCCTG
AAATAATAAAGCTTTTGCCGTGAAATTTTCTGTAAATTCCTAACTTTTAT
TTAGCTTCAAAATAAAAAAAAATTTGACACCTAAATATTTTCACACCTTG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGTAAGGTGTCACAAAAATTGACACTTTTCCAATACAAAT
TTATTTTCATTGTCAAATATATCGTTTAAACCGTAATTTATTGAATATTT
AGGATAAAAACAGCATTTTAAACTCAGACAACTTTTTTCTAAAGCCTTTG
TTAGAATACAATAGCTATTTATAAGAACAAAGGAAATTTTCGGTTTTTGC
TCCCTTTGGGCATGATGAGTGACGTCATCAAAAATTTTTTTTGTTTAAAG
TTACCTTACGTCACAAAGATCTTGTGTGCCAAATTTTATCTAAAAAGACC
CACTAGATCAAAAGTTAAGGGGTGGTACAGGAAAAGCCCCCCCCCCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCTAGTTCTGAACCGCCCCTAAAAGCCTAGGTTGAATAGGGT
TAAATGGTAACTAGCCATAGTAAAATGTTTCTCTGTAAGATTTTGCCAGA
GAGGCTTAATAATCCATTTGTGTAAAAATTGCAGGACTATGATTTTGTAG
CAGAATTTTTTTCTCTTTTCTTTATTTAGGTTTTAAGCTGCACTGTTGCT
GACATTGCTGGATGAGCAAAAAGCATCTGGTACTGAATCGTTATCAAAAT
TTGTTCGTTTAATGGACACATTTTTTGATTGTTTGAATGTTTCCAGGCTA
ACAAACACATCAGGAAAGAAAGCCAAGGATAAATATACTGGTTCAAAAAT
GATTGGAGGTTTGAG

Coding sequence (CDS) from alignment at scaffold_336:87830..101094-

>TCONS_00060169 ID=TCONS_00060169|Name=TCONS_00060169|organism=Clytia hemisphaerica|type=CDS|length=2904bp|location=Sequence derived from alignment at scaffold_336:87830..101094- (Clytia hemisphaerica)
GTTTTAAGCTGCACTGTTGCTGACATTGCTGGATGATTCGATGGAAAAGA
GATGGGCTGGCACCAAATCCTGGACTTGTACGACTGGGATCTTGGGCCCT
CGCGCTACTGTTTCGGCATCAGATTTGGTCATAAGTTGAGGCATGAGCAT
ATCAAGTTGGACCCCAGAAGCAGGATGCGTGTTAATCTAGCAGCTCAAAG
TGGTTTGGTTTTTGATAAATTAACAGGCCGATTGGTTGGATTCACTGAAA
TGGGTGATATGAACGATGAGCTTGAGCACTTCGAGAGGTTTTGCTCTGAG
GATACTATGAAAGAAAAATCTGTTGCTAAATATTTTATGGTTTTCATGGT
CCGTGGCTTATGTTCAGGTCTTGAGTACGTCTTTGGACATTTTGCTAGTG
AGGGCTTCACATCTGATCAAATCTTCCACTGTGCACACGAAGCGATTGGT
ATCCTTGAAAGTATAGGATTGAAAGTACGGGCTGTAACAGCTGATGGAGC
AAGTCCAAATAGAAAATACTTTAAGTTACACAAGCTTCCAGAAAATACCA
AGGAAACCAATTTATTTCATGGAAATGTTTACTGGGCTTACAGCCCTTGG
GCATTCTCATCCAAAAGAAAGATCTACTTTTTTTCTGATCCACCCCATCT
AATGAAAACTACACGCAACAACCTGGAAAATCCGCATGCAAACAAAAAAA
GCAGGAATGTAGTTATGAAAATTAAAGTTTTAAGCTGCACTGTTGCTGAC
ATTGCTGGATGATTCGATGGAAAAGAGATGGGCTGGCACCAAATCCTGGA
CTTGTACGACTGGGATCTTGGGCCCTCGCGCTACTGTTTCGGCATCAGAT
TTGGTCATAAGTTGAGGCATGAGCATATCAAGTTGGACCCCAGAAGCAGG
ATGCGTGTTAATCTAGCAGCTCAAAGTGGTTTGGTTTTTGATAAATTAAC
AGGCCGATTGGTTGGATTCACTGAAATGGGTGATATGAACGATGAGCTTG
AGCACTTCGAGAGGTTTTGCTCTGAGGATACTATGAAAGAAAAATCTGTT
GCTAAATATTTTATGGTTTTCATGGTCCGTGGCTTATGTTCAGGTCTTGA
GTACGTCTTTGGACATTTTGCTAGTGAGGGCTTCACATCTGATCAAATCT
TCCACTGTGCACACGAAGCGATTGGTATCCTTGAAAGTATAGGATTGAAA
GTACGGGCTGTAACAGCTGATGGAGCAAGTCCAAATAGAAAATACTTTAA
GTTACACAAGCTTCCAGAAAATACCAAGGAAACCAATTTATTTCATGGAA
ATGTTTACTGGGCTTACAGCCCTTGGGCATTCTCATCCAAAAGAAAGATC
TACTTTTTTTCTGATCCACCCCATCTAATGAAAACTACACGCAACAACCT
GGAAAATCCGCATGCAAACAAAAAAAGCAGGAATGTAGTTATGAAAATTA
AAGTTTTAAGCTGCACTGTTGCTGACATTGCTGGATGATTCGATGGAAAA
GAGATGGGCTGGCACCAAATCCTGGACTTGTACGACTGGGATCTTGGGCC
CTCGCGCTACTGTTTCGGCATCAGATTTGGTCATAAGTTGAGGCATGAGC
ATATCAAGTTGGACCCCAGAAGCAGGATGCGTGTTAATCTAGCAGCTCAA
AGTGGTTTGGTTTTTGATAAATTAACAGGCCGATTGGTTGGATTCACTGA
AATGGGTGATATGAACGATGAGCTTGAGCACTTCGAGAGGTTTTGCTCTG
AGGATACTATGAAAGAAAAATCTGTTGCTAAATATTTTATGGTTTTCATG
GTCCGTGGCTTATGTTCAGGTCTTGAGTACGTCTTTGGACATTTTGCTAG
TGAGGGCTTCACATCTGATCAAATCTTCCACTGTGCACACGAAGCGATTG
GTATCCTTGAAAGTATAGGATTGAAAGTACGGGCTGTAACAGCTGATGGA
GCAAGTCCAAATAGAAAATACTTTAAGTTACACAAGCTTCCAGAAAATAC
CAAGGAAACCAATTTATTTCATGGAAATGTTTACTGGGCTTACAGCCCTT
GGGCATTCTCATCCAAAAGAAAGATCTACTTTTTTTCTGATCCACCCCAT
CTAATGAAAACTACACGCAACAACCTGGAAAATCCGCATGCAAACAAAAA
AAGCAGGAATGTAGTTATGAAAATTAAAGTTTTAAGCTGCACTGTTGCTG
ACATTGCTGGATGATTCGATGGAAAAGAGATGGGCTGGCACCAAATCCTG
GACTTGTACGACTGGGATCTTGGGCCCTCGCGCTACTGTTTCGGCATCAG
ATTTGGTCATAAGTTGAGGCATGAGCATATCAAGTTGGACCCCAGAAGCA
GGATGCGTGTTAATCTAGCAGCTCAAAGTGGTTTGGTTTTTGATAAATTA
ACAGGCCGATTGGTTGGATTCACTGAAATGGGTGATATGAACGATGAGCT
TGAGCACTTCGAGAGGTTTTGCTCTGAGGATACTATGAAAGAAAAATCTG
TTGCTAAATATTTTATGGTTTTCATGGTCCGTGGCTTATGTTCAGGTCTT
GAGTACGTCTTTGGACATTTTGCTAGTGAGGGCTTCACATCTGATCAAAT
CTTCCACTGTGCACACGAAGCGATTGGTATCCTTGAAAGTATAGGATTGA
AAGTACGGGCTGTAACAGCTGATGGAGCAAGTCCAAATAGAAAATACTTT
AAGTTACACAAGCTTCCAGAAAATACCAAGGAAACCAATTTATTTCATGG
AAATGTTTACTGGGCTTACAGCCCTTGGGCATTCTCATCCAAAAGAAAGA
TCTACTTTTTTTCTGATCCACCCCATCTAATGAAAACTACACGCAACAAC
CTGGAAAATCCGCATGCAAACAAAAAAAGCAGGAATGTAGTTATGAAAAT
TAAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037854	XLOC_037854	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060169-protein	TCONS_00060169-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_336	supercontig	scaffold_336:87830..101094 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0309297	0.230658	0.236989	0	2.87494	2.07622	3.91294	3.26261	1.00779	1.61932	1.74249	2.269	2.54304	3.96496	1.6182	1.64865	1.10675	1.24863	3.08936	2.12276	0.882838	0.630118	0.281124	1.60954	12.7575	11.0357	0.565177	0	0.285836	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00060169 vs. Swiss-Prot (Human)

BLAST of TCONS_00060169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00060169 (transcript) - C. hemisphaerica