TCONS_00060166 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060166
Unique Name	TCONS_00060166
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1657

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_336:47398..60656-

transcript sequence

>TCONS_00060166 ID=TCONS_00060166|Name=TCONS_00060166|organism=Clytia hemisphaerica|type=transcript|length=1657bp
gtcggagttttgacaagctgacgatgattttgcctctgttatctttgtta
tgatatagataaaagacttgagaagagtagaacaacagagacttttgtcg
aagttttgacgttgttagcaaggtactcccaagtgctatatcatcaaaat
ctattgtttcattttatgcttttaacgaggcggcaacgaagctagcagcc
ctttctacaaaaagacaaaggagatggatatccagtcgtttatatgttca
tggtcaAATCCAGATGAACTTTGATGTTATTTTTGGCCAAGAGAGAAATA
GAAAGTGAAAGGGGGGACTCAAGCGTGGAAGGGAAAATGTTGAATTGCAA
TCCAAGATGGTGAGGGCACAGCAGAACATTGAGTGTGCAGACGGCCAGAA
TTGTGCAGTGAAGTGCTGTTATTTCGAGTAGATTCAAATTTGAAGTGGTA
TGCATATCTTGCTTCTCTCAATCGTACTGCTGATCCTATCTTTGGATATA
AAGGCTGATGCATTGGCTAATTATGATGATTTACCACGTCTATCAAAGCA
AAGGAACCAATGTATCCCAGTTGAAATTCCACAATGTAAACGTTGGTATG
ACCAAAGAAGACCACCAAACATTTATACAGCTACCACAGCTGAATACCGG
AATGTGAAAAGTCTTGTTTCACAGTTATCTTTATTACCAAAAAATTATAG
AGAATGTGTAAATGACGCTACATTTTTACTGTGTGCACTTTATTCACCAG
TCTGTATTAAAGGAAGTAAACCGTTGAAACCTTGTAGAGAGTTATGCGTT
AAATGGCGAAAGAATTGTCGAAGATTGGATATTTTTAGTAATGTCGCTCT
TCCTGACAAGCTGAGAGATTGTAATGAATTGCCAGAGTTTCATAATTCAA
TGTGTATACAACCAAGCAGTTTCATAACCAAAGAACAAGAAGAAAAGAAA
TCGAATAAAGATTCTTCAAAACACAAAACGTGCGATTGTAAAGACTTCAA
GCAACCAACGCCTAAATATCGTCATTTTCGGAAAGCAGCCTACGTTATTG
AAGCAACAATCAATTCAAGAGAAACATTAGCCAATGGGAACACTAAAATC
ATACTCGACGTTTTAAAAATCTACAAGCAAGGTAAAATTTCGATCAAATT
CGGTAAACTACGGATGTGGTCATCTTGTTTGTGTCACAAAGACATCCAAT
ATGGCGATAAGAAGTATTTCTTGATTGTTGACGAAAACCAtcacaaaaag
aagaaaaatttagaaatcaGTAAGACAACACTCGTTCTTGATGCTAcaca
atatgaaaataaaattgacaaaTGGTACAAGAAATGTTTGAAGCGTAAAA
GTTGCTAATAATCATTGCTATTATGAGTGacattttctgataaatattcT
GGCAATCTGAATGGAACTAATAGCAGATCTGTTTAACATGTCTTTACAAG
AACATCTAATGTTTGCGAACCCTTTTGCTCTTAACTCTTTTGTGAGCTTT
AAACCtaaaattattcttaaaatgttcttatttcttaagaaattgggtgt
ttcagAGTCTGAAATAACcattttaacttgttcttaagccatcaaagcct
tgttcttataaagtaaccTGTATCGACAGAACAAGTAAAATGATTCTGTT
AGTGAtc

Run BLAST on NCBI

transcript from alignment at scaffold_336:47398..60656-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060166 ID=TCONS_00060166|Name=TCONS_00060166|organism=Clytia hemisphaerica|type=transcript|length=13259bp|location=Sequence derived from alignment at scaffold_336:47398..60656- (Clytia hemisphaerica)
GTCGGAGTTTTGACAAGCTGACGATGATTTTGCCTCTGTTATCTTTGTTA
TGATATAGATAAAAGACTTGAGAAGAGTAGAACAACAGAGACTTTTGTCG
AAGTTTTGACGTTGTTAGCAAGGTACTCCCAAGTGCTATATCATCAAAAT
CTATTGTTTCATTTTATGCTTTTAACGAGGCGGCAACGAAGCTAGCAGCC
CTTTCTACAAAAAGACAAAGGAGATGGATATCCAGTCGTTTATATGTTCA
TGGTCAAATCCAGATGAACTTTGATGTTATTTTTGGCCAAGAGAGAAATA
GAAAGTGAAAGGGGGGACTCAAGCGTGGAAGGGAAAATGTTGAATTGCAA
TCCAAGATGGTGAGGGCACAGCAGAACATTGAGTGTGCAGACGGCCAGAA
TTGTGCAGTGAAGTGCTGTTATTTCGAGTAGGTAAGTTGAAATCGGAAGT
GCTCTACTTGGGATCTTAGTGTTGTGCTAGAAGAAATCGAGAAATCGAAA
GTGAAAGAGAGAAATCGAAAGTGAGAGGGGAAATCGGGCGTGGAAAGGAA
CAATAATGTTGGACTAAAACCAAGATGATGACAGGACAACAGAGCATGGA
ACGAGCTCTAGAGTAGAAGACCCAAATGGTACAGTGGAGTATTGCTGTTC
GGAGTGATAAGTTGGGATAGGAAGTGCTTTATTGGGGCTCGAACTTGGGA
TCTCAATAGTGTGCTGAAAAAAAATTGAAAAATCAAAAGTGAAAGGAGGA
AATCCAGCGTGACTGAGAAAATGTTGAACTAGACATCAAGATGGTGTCGA
GGATCAGCAAAGACCAAGTTCAGCAGAGTTTGGAGTGTATAGACGATCAT
AATAGTGCAGTGAAGTGTTGCTATTTGGAATCAGTTGAAGTTGAAGTATC
CTAGTTGGGTTCGAACCTGAGACCTGAGTGCTGTGCTTAAATTCCAGAAA
TCGAAAGTGACAGGGAGTTAAATGAAAAGCGGAGAATGTTGAGCTAGAAG
CCATCTCATAAAAGTGACAGAGGAATGGGGTAGAACCTGGGAAAGGAAGG
AGTCAAGTCCAGCATAATGGAATAGTAAATAGATACCTGGGGTATTGATT
GGCACAATAGTGACAATTCTGTTTTCATATTGGTGAAGAATCTACTTTAC
ATTGTAAAAGTTAGGACATCCAGAGTAATGGTATAATAAACGAAAAAAAT
ACTAGAGTGTTTTCAAGGTGTCATGTTCGTAGAGTTTTTTTGTTCTTTTT
TTCTGGAACGTCTTAACAAAATTTTTCTAAGACATGTCGAAGTTTTCCGC
CTACATCATCTAGATAAAAAAGATACAATAACAATAAATAATACACAGCT
AAAAATCTACTTTACTTAATTTAATTAAATAATGTCTGAATGCTGTCGAA
CGACCCCAAATCATGGTTTCTGCCTACTGTTTCAGTCCCCCCTTTAAATG
CAATTTTGCCCTTAAATAAAACTCCCCCCTTAAATCAAACAAAAATTACC
AGTACCCCTTCTTAGAATGTCCCCCCTTAAAATAAAAAAAAGAGGAGTCC
CCCTTCAGAGGGGGAGGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGG
AGAGGGAAACTAAACGCCCTCCTACATAGCCCATGTCTGATATATACGAC
ATAGATTATACCGCCAGGATGTAGGAACCAAATAAGAATTATATATCTTA
TATAAGACAAAATGAAAAATAACAAGAAATTAAAAGAAGATATAAGAGCT
AAAGGGAGCAAGCAAATTAGAACAACGGTCCCCCGAAATGGTCGGTGTCA
TGAATGAATTTTATTGTTATGCTCAATATGGCATGATTTTGAGTAAAACT
GAAATTTGCTTCACCATAGAGAAGTATTCTACACACAATTTCAGGGTTTA
TTAGAAGTAAGTTTATGTCAAGTTGTAGAAGGCTGTCAAACATTACAAGT
CTGTCATTGGAGTAATCAGAGGAACATCAGAGAAATGCATTAGGAAATGC
TGTGTCGTTTCTACAGAATTACTTCGACAGTTGCAGAAGGGGTCGCTTGT
ATCTGCAAAGTCATATCTAAATTTGTGGTCCCAAAGATGACTGAAACCAA
CCCTTAATCGGTTAAGAAGAACCACGCCAGCGTTGTCAGCAACTATCTGA
AAACTGAGTTAGCGCAAGGTCTAAAAAATTTAAGAATCGCTTGTTTGAAT
AATGAGATAGAAGGAAGATTCCGTATATTATCGCCCAGGTTATTCCATTC
ATTGATGCAAAAAGGAAAAAAAGAAGGCTAGATAACGTTCAGTCCTACAA
AAGGGTGCCTCAAATGGTGTTTTTATCCTCCGCCCTGCCCTACGTCCCTC
CTCCCCTCTCTGGGGAGGAAGAACATTTGAGAGATAAGCAGGTGCAAAGC
CATTGATTATTTTATAAAAATATAATAGTCTTCGACTTAACCCTATTCGG
CCTAGGAGGGGGCTCTTTCTGTTCGGAGGTCAAACTATTGGTAATAGTTC
CTGAAATAATAGAGCTTTTGTCGTGAAATTTTCTGTAAATTCCTAACTTT
TATTTAGCTTCAAAATAAAAAGAAATTGACACCTAAATATTTTCACACCT
TGAGCATGATGACATTTCTGACAATAAGGTGTCACAAGAATTGACACTTT
TCTAATACAAATTTATTTTTGATGTCAAATATATCTTTTAAACCGTAATT
TATTGAATATTTAGGATAAAAGAAGCATTGTAAACTCAGGCAACTTTTTT
CTAAAGCCTTTGTTAGAATACAATAGCTATTTATAAGAACAAAGGAAATT
TTCGATTTTTGCTCACTTTGGGCATGATGAGTGACGTCATCGAGAAATTT
TTTTTGTCAAAAGTTACCTTACGTGACAAGGATCTTGTGTGCCAAATTTC
ATCCAAAAAGACCCACTAGATCAAAAGTTAAGGGGTGGTGCAGAAAAAGC
CCCCCCTAGTTCTGAACCGCCCCTAAAAGCCTAGGTTGAATAGGGTTAAT
CGCCTTTCAAGACCTAGCTCAAGATAAATTTTTTCTCTGGATGTTCCTCT
GAAACATTCAGTCATAACTGACTCTAGCTTTTTAGAAAAGGACGAATTAC
CGGGACGATCATATACAACATCTCCATAATCAAGGTATGGTCTAATATGG
GTTTTGAATATCGTGACTAGTGAATCCCTAGGTAGGAACGCACGAAACCG
ACGAATAAGACCAATACCTTGATTGGCTTTCTTAATTTTTTCATCAAGAT
GACGATCAAGTATGAGACCAAGATGTTTTTGATGATCTTGTTGAGCAATG
GCTGCGTTTTTGAAATAAATTGATAGAGGATCAGGTGGATTTATCCTCCG
AGTGAAGTACACTTCAAAAGCCTGTTTAGATGGATCATAGTCCAGGCAAT
ATTTGCCTGGCTTTTTGCTGAGCTATAAAGAAAAACGTTAAAACTTCTTC
TCGTATTTTGGGGCAGTTTTGACTGAATTTTTCAAAAAAAATGGATTGTA
AATAAATAAAAAAGTCATCTAAAATCCATAACATTTTCACAATGCTACAA
CTATACCGACTACGTGCAATGAAGGTATTAACATCTATTTCATGGAAAAA
TTTGGCCCTGTGTGAAATTTATTGGTGCTACCATCATTTTTCACACACAA
TCTTCGATGCTTTTTTTAAAACCCTGCAAAGATTTAATAGGTTTTGATAT
GTATTTCATGAGATATCTTGAAATGCAGTACCCTACCCCAAGCAAATCGG
CTCCAAGAGCGATTGCCACATACCCTTCTGAAAAGTTATCGCCCCCTGGT
TAGCCTGAAAACCATCGCGATTCTCAAAATATAGATATGCTTGAACCCAA
AAACAGTTTCAAACCTTTTTCACCCCATATTGCCTGGATTATCAGGGTTG
AAGGTCATTTTTCATTGATGAGCCCACTCACTAACCTTCTGCATGTCGCT
GTTCATTTCTTGAGAACAGCGAATATGGTCTAGGATAAGGGACATTGGCA
CTTATAGGGTTAATTTGAGTGAAAGTTTCAAAAAACCAATTAAATTCCCA
CTCTAAGTTTTTAACAAACGCAATCTTGCTATTAATATGGTTGTTCAACT
AAAGTCTGTTTCAAAAATTTGACAGTCCGCACATATTTTACAAAAGTATA
AATACAAATTTTTGATCAAGTAGAAAAAATTAAATTCTCGAAATTTTTGA
AGCATTTAGAAATCTTAAAGTCATCGGCTTAAGATAATCTTTTAAACGAG
GTATTACTTTTAATTATATCTCTAGTCGGGATATCCAAGCTCAAAATTTT
AGAAAAATTACCTCAACACACAAAGTTACAGAGGTCTCCCTAGAGAATGA
AAGTGCAATGTTTCTAAAACTTTTCTATCCAACCCAGGGCAGCCAAACAA
AAATTAATGAAAAGCAGCCTTACTCGGTAATGTATTAAAATGTGCGGACT
TTCAATTCTTTTGGAAATAGACTTCAAATTTTTATGAATAACTGTGACAA
TTATGTTTTGTCTTTTGACGCTTAAAGGGACATTAAAGTAGTAAAATGTA
AACATTGCGCGAACCACGTGTCATTAAAGGGACATAACAGTACTTGCGAA
ATTTGTAAACAAACTGTATGCAGCGGATACAAAATCAAAACATATGTCAC
ATGTCAAAATAAAAAATCAAACCAAATATGGCTAATTTTGATTGTTCAAT
TGCTGTACAATTTTGTTTTGGACACGTGATTTTAATTGTTCTCTTTAATG
ACACGTGGTCCGCGCAATGTTTACATTTTACTACTTTAATGTCCCTTTAA
GTAGAAACTATCTTTAATACAGGGTGTCCCTAATTAAAGTATCGAGTTTG
AACATGCGATTGAGTAGAAAAGTTTGTGTGTGTTATCGCTAAAATATAAG
AACGTTCTCCATCACACAGGCTTATTACAACAGGTAGTTACAACGTATAG
ATTAATCGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTTT
GTGAACACGCACATAAAACTTTCTACTCATAGTTGTGTTTCGACTCGATA
CTTTAATTAGGGACACCCTGTACACTCTTCTCGAGATGCATAAATTTATT
GTTGTCCTCGTTTTGAAGCAGATTTCATTGCTATGATAATTGTGTTGTTT
ACACCTAATGAGACATTTTGAATTTCAAGTACTTTTGTTTTAAAGTTAAT
GTTTGCCTTTTGGGAATTTAAATTGGTTTGAATGCATAATTTCATAGCAA
TGAAATCTGTTTGAAAACGAGGACCAATAAATTTATGCATCTCGAGAAGA
GTGTATTGAAAATCTCTTACCCCCGAAAGAGCTGAGATATTCAAGAATTT
TGATTATCTAATGATCACCGATATGGAAATGCCAGCTCTTCATCTCAGAT
TCTTTTCACATACCCCCTTCTCACAGACCCACTGGAAAAATTGGCCAAGT
ATCCCGGTGGAAAATTATACACCAATTTTAGTCCTAACTGAAAATATTCA
AATAAAGCTATCCTCGCTGCAAAATATTATGCTATTTTCCCATCCCCACT
GAATTTTTCCGACTTGAAAACAAAAGAATTGAAATCCCCAGCTATAAAAG
ATATGAGAAATTCAATCCCCATCAAGATTCACTCTGTTATTTTTATACCC
ACTGGCTGAAAAAGTTCTACCGGGTCTGTGAGAAGGGGTTTGTTTTCACG
TTATTGCGTAATATATACTGTTCGTTATTCAGTTTGTATGAATAACTGTG
ACAATTATGTTTTGCCTTTGAGGCTTAAGTAGAAACTATTGTTGACAGTC
AGAAATTGAAGTGGAAATTTTATATGCTATGGTGATCAAAACTTGTATTT
CAGCCTTTCAGAGAAAGCCCAAGATATACTACTTGTACAACAAGGACTTC
CCTTTTTCGTTCTCATGAATCTTAATTATGTTGAAATACCTTTAAAAACC
TTTTTTGGAATTTTGTCGCCACAAGTTGTATATCGAAGAAAACACAGCTT
GTAGTACTCTTGGTAATCGCAGAGTATTCAGAGAAGATCTCGCAGGAGTA
GTGAGATAGGAATATCAATACTCTACGTTCGTATACACGCTTTTTTTATA
AAAAGTCATTTTTGTGAAAATGTTGAGCCTTAACTAGGGAAAAAATGGCA
ATTTACAGTTAAATTTGCTCTGCAAATGGCATTCTTAAATTTTGTTGCCT
AATTTCATGATGGTGATATTCTTACGATATTCTTAATTTCTTGGCCATTT
TCATCATGGACATTTTTACAAAGTGTATTCTTATAAAAAAAGTGTGTGTA
CTGTATAGTATCACGTGATGACTGATAGAAGGAGTAAATCAAAACGAATC
TTGTCACAGAAGTTAGCTTTATAAACTGTTAAACTGTCAGTTAGGGCCCT
CCTCAATTTGTGTGACAAGCGTCTTCAAAATGATGCTAGTTTTATCTGTA
AATCGCGTGAGATTGACATTTCAGAACGATAAAAAAAGACAAACATTTTA
AAGACTGTTGACATCATTTCACTTAAAATTGTTCATCAAATCTTTGAAAT
TCATACAAGAAACGAGTTGAAGTTTTTTACAAGATATCTGTATACGTCTT
GAAGTTACGTACAGATTCAAAATTTTTGTTAATGCCTAATGACTGCTTCA
AGCTATTGAGTGGACTTTTTATTTTGAAATTTGGTGATGGAAAGTCTGGG
TTTCGGCCTATCCTTCTGCCATTAATAGGTGAATATTTATTGAAATGCTC
TTCAGGGCAAATTCTGCAAAGAAAATACTGAAAGACTTATAATATAAAAT
GGAATAATTAGTCTCTATTTTTGAGTGGGTCTTAAAATATTCTAATGTAT
CATTTAAATTTGTCGGCACACTTCACAATGTCGGTGTGAATGTTAACTTC
CGGAGCAAAATAAAGAAAACCGTTGTAAATTATCTAGTTATGAACAACCC
TTATTTCAAGTCAATCGAGTGACAGATAAAAATATAAAGTTTAAAAACAG
ATAAGTGGATTACGCTGTTAAACCCCCCTTTCATCTCTGTCAAATCCTAG
ACGAATGTCATTGGCAAAAAGATGCATCTTTGACAAATATTTATCTTTTG
TTTTTGTTTGAAAATCGTTTAAAGGTATTCGTGACTGATATTCATGAAAA
AAAAACTATTTGTTCAGATCTGACTTAGAAAACGTTTTCGTTCTCTGATA
GGTTAACAACCAGTTAGCTGGTATTTTGTGGTTGGTATCTGTTACATATT
TTTCTCATGAATTCAATTTGGATTCTTTGAATGAAGATAGATTACTCATA
AGCTTTGTTCTGAATTATTCGAAGTTATGAAATAACAAATATACTACCTA
GCTGGTACACACAAATTCATTTCAATGTGTATTTGATATGTTTACAACGT
CCATATAACGATAGATGAACGTTAAAACACGTTGGTGCCAGCTGGGTATC
GAACTAAATTCGGGTTCATTGATTTTCAACGGTACTTGTAGATTTGAATA
ACTTTAGTAGTCTTAAATTGTTGATTTTCTTTGACTTTTTTAGATTCAAA
TTTGAAGTGGTATGCATATCTTGCTTCTCTCAATCGTACTGCTGATCCTA
TCTTTGGATATAAAGGCTGATGCATTGGCTAATTATGATGATTTACCACG
TCTATCAAAGCAAAGGAACCAATGTATCCCAGTTGAAATTCCACAATGTA
AACGTTGGTATGACCAAAGAAGACCACCAAACATTTATACAGCTACCACA
GCTGAATACCGGAATGTGAAAAGTCTTGTTTCACAGTTATCTTTATTACC
AAAAAATTATAGAGAATGTGTAAATGACGCTACATTTTTACTGTGTGCAC
TTTATTCACCAGTCTGTATTAAAGGAAGTAAACCGTTGAAACCTTGTAGA
GAGTTATGCGTTAAATGGCGAAAGAATTGTCGAAGATTGGATATTTTTAG
TAATGTCGCTCTTCCTGACAAGCTGAGAGATTGTAATGAATTGCCAGAGT
TTCATAATTCAATGTGTATACAACCAAGCAGTTTCATAACCAAAGAACAA
GGTATGTTTCCAGGGACTATGGCATCAGTTGGGCACATACCCTGGTTTGA
GCATATTTTTTCAAAGCAAAAGGAAAATCTTCTAATTCGTGATATTTATG
ACATAAATTTATGGGAGCGCCTCGGTTTTTGTCAATAATAGGAAATTTTA
AACAACTTTTCTCTAACCTAAATTGGTAAAATCCCGGGATGTTTCCGTAT
TTAAACTCGTCATGAAAATCATGAATCCATGTATAGAAATTTTGAGAAAA
GTTTAGTTTTAGGCATTTACAAAAGTAAAGTTGCCGCTGCAAACTGCTCT
CGATGCGCTATAGACAATCACACCCCTTTGAACCGGTGGAACCTCCTGTC
TCAATTAAAGGATTGATAAATTCGATTATATTATCCCGGTGAAAGAAATA
GCCTAAGGTCCAACCCCCTCTTTAGAAAACTACTCTGATTCTAATCTCAA
CTTGAAAACACACAAATATATGAGAATCCTCCCATAGGTCGTTGAGTTGT
AAACAAAAGATAGGGATTTTCAATTAAGCTTGGTCGGTAAGTTTGTATTT
GGCATCTCCATTTTATCCCATCGAGTTATTGAGACCGGGTTTTTTAATCC
TAATGTGTGATTAATTTATGACTCTATTCTAATTTGCCGTCTCAAGTACG
AAGTCTTTTCCTAATAGAAACAATAAATATCTGTTAGAATATCTTCCTTA
AATGGGAAATTTAAACTCATTAGTTTCCATGCCTCCTTCTTTCTTATTAG
GTCATTGATTCAGGGATCTACATATACATCAGTATCTTTCCACATACACA
TGTTTTGTATCATGTTAAACCTAAAAACGCCTCTGCCTCACTCGTCTCAC
TGCACCAGTGGAGCTTCTTTTCACAGTGAAATGAAACTTTCTATCAAAAT
CCCAATGGTGATAGAAATTATCTTTCTCAGCTATTTTCCCTTCTCAAATC
TCAAACAATAATAGACACATAAGGCATAGTTTATTGGATAGATCTTGCAG
TGAACACGCCTTTAGTATCGAAATAAATATATGTTACATTATAAAAATAA
AATTGGTTACACTAAGTATTACAGTGGTCATTTGTGTAAATTTTGACATC
ACGCTAGCTAATAATAATAAAAAATACTTTTTTAGAATGCATGGTTATTG
TTAATATCCTCTAAAGTAATATACTTGTATTGTTGAAATAATTTTACATG
TTCAAATTCATCAAATGAAAATATGTGTATAATTACGTAGAACTTGAGAA
TAACTAAATTGTACTGTGACGAAGCATGTAGCGTAAAACCCCCAGTGGCT
GTTTATTCTGGAGGAAACATTATCCCCGACCAAGGCAGCCGTCACGCCGA
CCTTCGGAGGTTAAAGGTCCTCCCACTTTATAATGTGAAATATAACGTAA
ATAATTCAAAACATTTTATAGTTTGGTTTCTGGTATAAAGTTCTTTCGTC
GTTTCAAATGTCCACGTTAGAGTGTCGAATTTTTGTAATGTAACGTATTT
TGCAACTGTGTAATTCGAATGTATGTTTCAATGATAGTTGTGTCCCGGTA
TCGCTCCAGTAGAACATCTTGATCGTCGGGTCATGGTTGCCCAGCATTGA
TAAACGGGTTTTCCAGGTTCAGGAGCGTGTAAGAAAAAGAAATAGCATTA
ATGTTATAACAGTAAACTTAAATGTGAAACTTAACTTAGTTCAAGGCGTA
TGCAAGAGCAAGGATTGACAAGCTGACAAGCAGCTTCTTTAAAGCATATT
GCGCATGCGCAGTTTGTTCCAATCTGCGCAAGATGGTAGATTTTCGTACG
AAAAACGCGGAGAAGCTCGATTTCCACCTTTCTTCGATCGTTGGAAATCA
CACTGTTCTTAGGTAAAAAAATCTAACTAGATGTGGATGGTTTATGAGTG
CAATTTTTTCATTGAACTTTTAATGAGGCCCCCCCAGCGGCACCCTTAAT
CTTGCCATCACGCAAAAAAATTTTCTCCATCATGCATCACGAAAATTTGT
CATCACGCAAAAAATAGTGAAAAATAGCCCAAATCACGCATCACGCCTCA
AATTTTTGCCCTATCACGCATCACGCCATCACGCCAAAAAAAAATCTCCA
ATCACGCCATCACGCAAGAAAAAAGTCCCAATCACGCCATCACGCAAACG
GCTGGGGGGGGGCTCTTAAATGGGATGAAAAAAGATTTTCCAGTTGGGTT
GAAATTGTACGGAATCCTTTCCACCGGGAATGAAAAATTTGAACAAATCT
TTCAGTGAGAGGGGGATCCCAACGGGTCTGTGACACAGGGGTCTAAAAAA
CGGGGTTTTTTTAGCTTAAAATTTACCAATTTTGTTTGAATCAGTTTAAG
TGGGATGCATCCCGGGGGAGGCACTCAGGCAAACGGGTCATGCCGCTGAT
CAGGGCCTCTTTGTTAGGTTCTAAAGACATCTAACAGGGTCCCTAATTTA
CTAATTTTCAAGATTTGTATCGAACAGGATCGACTTTTGGTTATTTTGAA
CAATTTTTAGAGTCCACCCTAATAAGATATTTTTCAATCTTTTGTCAATA
TTTTGTCATTTTTGCTACTTGTTGTAGGAATTTTTTTTCGATTTTTCGTT
CCGACAGGGTCCCAAATTTATTACATTCATATGACAGGGTCCAAAACTTA
AATCTCTTAAATGTAATTTCATTTGCAAGATCCAAATGTCTACCGCTGAA
TATCAAATGGTTATTCATTACTTTTCAGAAGAAAAGAAATCGAATAAAGA
TTCTTCAAAACACAAAACGTGCGATTGTAAAGACTTCAAGCAACCAACGC
CTAAATATCGTCATTTTCGGAAAGCAGCCTACGGTCAGTAAATATCTTGT
TCAATTCATATTAATAGTTTATTTCGGGCAGTCGAAGAAAATTAGAGAAG
TTAAGGGTTCAAATTTGAAGGGGGTAATAGGTTTCCGAGGTTCCGAGCCA
AAGTTCGAAAATTGACCCTTTAGACTGATATTTTGAAAGTTTAGCTCCTT
TTTGACGAATTTACGACCCTTTTCCCAATTTTTAGCCTAAATTTTGAAAC
TTAAATTCAAATTACAAGAGTCTATGGTCCTGGGAGTTTATCCTGTTTTT
TTCTTAATTTTTGGATTTTGCAGAGACTCAATGGCGAATATATAGACCTT
TTTGACTCGTACATACCCGACACCCATTCTCTCTCTGTCCTAGGAATGGA
ACTTACACACGTTTTTAATAAAGACATCAAAGGTTTTGAAGCTTTGATGA
GATGTTTTTAACTTTTTGAGTTTTGAGCCAACAATGTTTTTAAGTTGTTT
TGAGTAATTTTTTCTTATATATTTTGTTCAAATAAAGTACGTAAAGAGGG
AAATTAAGCCAAGTTCAAGTAGAAATAAAGGTTTTCCCACCGAATGGGTA
AATAGCTATGAATCGATTGCAGCTATCATAAATGGAAAACTATACTCCAA
TTTTTGTCTCCGCTGAAAATAATCAAATATGTAACAACCTCACTGCAAAA
CATGTGCTTTCTTTCAATCCCCCTGAATTCTTTGATACGTGAAAACAATT
GAATTCGAATCCCCGGCAATAAAAAACATTATCCAATCCACATCGACTTT
CAGTCCGTTATTTTTACCCCCCCCCCCCCCAAAAAAAAAAAAAAATTTCC
AACCCCCACCGACTTTTTTTTCTTTTTTTTTTCCCCCCCCCCCCCCACAA
GCTGAAAAAATCTTACGGGGTCTGTAAGAAGTAACCTGATAACAGCTGTT
CATAATTTTCTTGCGTGCACGGTAAACCTCTGAAGGCACTTCAAAATTAT
ACATCTGAGGAAAATAGTCCTCCCGCGGAAAATTTTACAACAAGAATCTT
GTTGTGCGCCATGCGCCAGAAAGTCAAAAATTAATACGGCGCCCTATTCA
TAAACACAATGACGCAACTTTGTTGTCATCCCCAGTCCTTTTAGACGAAC
GCGGTCCTTACGATTTCGAGATTGCATATTCGTCAGATTGTATGTTTTCA
CCCATTCCTTTAGAGCTTCAGCGTGGTGGGCAGAAAACAACCACAATCTG
ATCTCAGGTTAGTGAGAAGGGGGTGTGTATAAGGACAACAAAAAAATATG
ATGCAATCACCAAACTTATATTAAAGTATTTTCTTCCTTGATAGTTATTG
AAGCAACAATCAATTCAAGAGAAACATTAGCCAATGGGAACACTAAAATC
ATACTCGACGTTTTAAAAATCTACAAGCAAGGTAAATTTTGGCTAAAGTT
CATCTACTAACTCCAAGAAGATTTTGCAGCATACTTCACTTTGGAGACCT
CAATTTTATACAAAACCAAAACATTATATATGAAATGTAGTATTACCGTG
AATCTTATCGATTCCGTCCGTTTTGAGGGTCATTTTTCTTGATAACAGGG
TAGATATTATAGTTTCTAGGGCGTTTGGAAGTTTTTTGTGTTTGCATTCT
ATGTTCGTGTCATTGCTTAAAAAAATCATACTGCACTTATTTTCCTACAA
GACATTCCTGTATCGGTGACCAGGTGGGGATATCTAAGCCATTGGGGACC
CAGATCGGGGAAAGAATTGTAAAGTAAACTTTTACCCAGTCCCTTGCTTA
GTCCCTTAGCTCGCTTTTTATGATATAACACCCTCGATGGTATCGAAAGA
GGAAGCTGTAATTTGAAATGTTTTTGTTTGCAGGTAAAATTTCGATCAAA
TTCGGTAAACTACGGATGTGGTCATCTTGTTTGTGTCACAAAGACATCCA
ATATGGCGATAAGAAGTATTTCTTGATTGTTGACGAAAACCATCACAAAA
AGAAGAAAAATTTAGAAATCAGTAAGACAACACTCGTTCTTGATGCTACA
CAATATGAAAATAAAATTGACAAATGGTACAAGAAATGTTTGAAGCGTAA
AAGTTGCTAATAATCATTGCTATTATGAGTGACATTTTCTGATAAATATT
CTGGCAATCTGAATGGAACTAATAGCAGATCTGTTTAACATGTCTTTACA
AGAACATCTAATGTTTGCGAACCCTTTTGCTCTTAACTCTTTTGTGAGCT
TTAAACCTAAAATTATTCTTAAAATGTTCTTATTTCTTAAGAAATTGGGT
GTTTCAGAGTCTGAAATAACCATTTTAACTTGTTCTTAAGCCATCAAAGC
CTTGTTCTTATAAAGTAACCTGTATCGACAGAACAAGTAAAATGATTCTG
TTAGTGATC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037853	XLOC_037853	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_336	supercontig	scaffold_336:47398..60656 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0542602	0	0	0.0489716	0.898861	0.34886	1.48401	1.45027	0.2272	0.4906	0.631554	0.32226	1.71156	1.21985	0.261885	0.353965	2.26191	1.24799	0.814083	2.14796	1.81298	0.831788	0.423508	0.384759	5.08189	7.55786	6.24425	1.97092	0.170052	0.15346

Blast

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BLAST of TCONS_00060166 vs. Swiss-Prot (Human)
Match: SFRP3 (Secreted frizzled-related protein 3 OS=Homo sapiens GN=FRZB PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 5.114e-16
Identity = 62/220 (28.18%), Postives = 103/220 (46.82%), Query Frame = 3

Query:  561 CIPVEIPQCKR--WYDQRRPPNIYTATTAEYRNVKSLVSQLSLLPKNYRECVNDATFLLCALYSPVCIKG--SKPLKPCRELCVKWRKNCRRLDIFSNVALPDKLRDCNELPEFHNSMCIQPSSFITKE-----QEEKKSNKDSSKHKTCDCKDFKQPTPKYRHFRKA-AYVIEATINSRETLANGNTKIILDVLKIYKQGKISIKFGKLRMWSS--CLC 1184
            C PV IP CK   W   + P +++ +T A   N    + Q   L   +  C  D  F LCA+Y+P+C      +P+KPC+ +C + R+ C  + I    + P+ L  C ELP +   +CI P + +T +      +    N   +  + C CK  +     Y  FR    YVI A +   +T  +  T ++ +V +I K   ++I    + +++S  CLC
Sbjct:   35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQA---NAILAIEQFEGLLGTH--CSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENL-ACEELPVYDRGVCISPEAIVTADGADFPMDSSNGNCRGASSERCKCKPIRATQKTY--FRNNYNYVIRAKVKEIKTKCHDVTAVV-EVKEILKSSLVNIPRDTVNLYTSSGCLC 245

The following BLAST results are available for this feature:

BLAST of TCONS_00060166 vs. Swiss-Prot (Human)

BLAST of TCONS_00060166 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SFRP3	5.114e-16	28.18	Secreted frizzled-related protein 3 OS=Homo sapien...	[more]

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TCONS_00060166 (transcript) - C. hemisphaerica