TCONS_00060156 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060156
Unique NameTCONS_00060156
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2043

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060156 ID=TCONS_00060156|Name=TCONS_00060156|organism=Clytia hemisphaerica|type=transcript|length=2043bp
GCGGGGCATTATTGGCGATCGCCTGCGGGCGGTCGTTTTTCTTTCCATTG
GCGTTTGGAAGAAATGATCACGTGCTGAAATTTAAGGAAAATGAAACCTT
CAATGAAAACTGACCAATCGAGTTGCTTGATTCATTCTAGTCCAATCAAA
TCTAATATGGTTGTCACGTGTCTAATGGTCATTTGGCTAATTTCAAAACC
ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC
TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT
TCAAAACGGATTCAGACTCCAACCAAGTCACTAACCATTCTACAGACTCC
AACCAAGTCACTAACCATTCTACAGACTCAAGACAAGTTGAACCTGCAAA
AATCAACTCTCCTGGAAgATCTACTGAGGATGATAATGAAGCCCCTCCTC
CTTCAACTCctaaaaaacaaagaatgaGCTTTGCAGATTCTGAAACAAGA
GAGGCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTC
AAAAGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAA
ATATAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAA
CTCAAGGATTGTCcaatcaaaatttctaaattcacCGTTGAAAATGATCA
ATACAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGT
TTTCGGACATGAACATTCCTTATAACTTAGttgcaaaaaaattagaatGG
GTCAATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAG
TATCATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACG
AAGACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGAC
AATACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACA
GAAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAA
CGTACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAA
TCTAATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAA
CCAAGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAA
CCAATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAG
TATGGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCggtgagaaatt
ttttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCA
CATTTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGAT
CATAATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCT
TTCTGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAAA
TTTGTGACTTAGAGCAAATGGGACTCATCGTGTTTTTTGTTCATTTATCT
TTCAGTTTATATTTTATCTGATTCTACATCATCATTTTGTACAGTAACAT
ATATGTAgatgtatatatatatatctatATAGATTTTATCAGTTTTTATT
GATGTAAGCCTAGTTTGTGCTTTTGAACCAAAGAGCTTTTACCATTTTAA
TTTTAACACGTCCTTCTGCCCCTTACTGACAGTAAAAGTACGAAATAGAC
TTCTCCATATAAATCAATTAAATGCATAACTTGTCTTAGAACtcgtttct
tctttttgttgtaAAAAAGCTTCTTTTTTTCAGTAAGGATTAAAATGGCA
GTCTTgtaaatagcaattaaagtttgGCATTTTCTAGATAGATCGTTCTT
ATTTCATACTACATATTTTTTAGGATaggattttttttatcataaagCTA
GGAAAAGGTGTACTTTCATTTTAAATGTATTCTACTGGTTAGAGTTTTTA
ATTTGACTGTATACAGATTTAGATGTGAATAATTTGTGTAACC
Run BLAST on NCBI

protein sequence of TCONS_00060156-protein

>TCONS_00060156-protein ID=TCONS_00060156-protein|Name=TCONS_00060156-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
MLFLSSRLTFDKFGHCSTTRIFESKMPKKTKLQFKTDSDSNQVTNHSTDS
NQVTNHSTDSRQVEPAKINSPGRSTEDDNEAPPPSTPKKQRMSFADSETR
EAHGYVIRLYDVTTSPSKVKYFNAVIDNGIQESNIVCYNPDLHEAFSSAK
LKDCPIKISKFTVENDQYRNQTKFKLGSAGNAEFSDMNIPYNLVAKKLEW
VNAFTDLINVENIALESIINVACHVTLVGEAFDEDTKFGRKKKMNVRIHD
NTITESIRLVLWGNHAQKITASGSYRFKELRVKTYNGRYLTTTAYTEITQ
SNESYEVRLDDNYNSLNQETIVAFPAIGINKLETNYYCSICNHKVIKLGK
YGMCNKCPMKALLGEKFFDVKVSFKNGSENVMVTFPHNIFIQLIEKVNAD
HNDLDDIEEKLLVTKDLSVKYKQMSRIATAIL
Run BLAST on NCBI

transcript from alignment at scaffold_336:29663..33569+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060156 ID=TCONS_00060156|Name=TCONS_00060156|organism=Clytia hemisphaerica|type=transcript|length=3907bp|location=Sequence derived from alignment at scaffold_336:29663..33569+ (Clytia hemisphaerica)
GCGGGGCATTATTGGCGATCGCCTGCGGGCGGTCGTTTTTCTTTCCATTG GCGTTTGGAAGAAATGATCACGTGCTGAAATTTAAGGAAAATGAAACCTT CAATGAAAACTGACCAATCGAGTTGCTTGATTCATTCTAGTCCAATCAAA TCTAATATGGTTGTCACGTGTCTAATGGTCATTTGGCTAATTTCAAAACC ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT TCAAAACGGATTCAGGTAATAAGCAATTAACTGTTTTGTAATCACAGGGA AAATATGGTTTTGTTGATTTACAAAAAAACTATTCCTTTACTCTAAGAAA CTCTGTTGGCCATTATTTGCCCTTTTGCTTTGCTTGAAACCCACGAACTG AATcagcattttttatttattctacAGACTCCAACCAAGTCACTAACCAT TCTACAGACTCCAACCAAGTCACTAACCATTCTACAGACTCAAGACAAGT TGAACCTGCAAAAATCAACTCTCCTGGAAGTAAGACTTTCTTCTTCATGT ATTAGATTGAATTTAGGTCAAAGTTTTATAGCTACAGGAAGGGATACGCC AAAGGTTTTTTTCtgagaagaaaaaagaagataaatAGGTCTTAATTAAA GAAGTACAGGAATTTTTGAGAAATGACATTCTCCAGGGGTAAACTAAGGG TCTGTTACATGTACCATTCTCCCCGCTgctatgaaatttttttgcattAC ATGCATATTTTATTTCACATCGCTTcaggcaattttcatttttggtgaGA TTTTCTGTCTGTTGTCGACGGCAAAATGATATTTTGCCCTATTTTGGTTA GGCGAagggttggcagacgatatcatccaccaggatgcaagtgaaatttt tcaatctacggacctagacgggggttcggttattatcagttagggttagg gttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNatgcaagtgaaatttttcaatctgcgg acctagacgggggttcggttattatcagttagggttagggttggagctcg agagtcacaatataaggccgaaggcctttTTAGGGGCATCCGTACCCTGT GACCTAActtagggatccttgtagggatccccgtagggatccttgtaggg gcaccggtagggttgggagctttcttaataaaggtctgtaaattacacac taaaagtatttgtgaatgacagcatTTGGCCGTGTCACGTTGGCGCTagc ggttaggcattgggtttgtaaaccaaggttgcttgtaTTTGGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNActagagaaagtcagaaaatcaggatagaagataggaaagtagaaaa taggtggaaaataagagaggatgcatcctggtggatgatatcgtttgcca acctaGGCGAAGAAAGTtgccaaaattaatttaaattattCCAACATACC AAAGTATTCTTCGCCAAAAAAATAGCAACTCAtgcttttgtatttttaaa tttcaggATCTACTGAGGATGATAATGAAGCCCCTCCTCCTTCAACTCct aaaaaacaaagaatgaGCTTTGCAGGTAATGACCAATTTTTCTGCTTGAA TGGGCTTAAATCACAGGCTTATAGATATTACAATGAGATTCTATGCACTT GTTTCTTGGATGATGAATCTCTTATTGGCCTTGGTTAAATATCATTGCAG CAAAATTACCCGTCGCACGACTTCTCGTGAAATACTTAAATATTATACTT GTTCTGGATATTATTTACTTGCGATATTACTTATTTTGCCTTTATAATCA AATCTTGAAACAGCTTTGATTGTTAGAGGTGCCAAAAGAGAAGTTGTTTT AGTCTCCCCAATTCTAGAAATAATACTTTTTGAGCTGGAAATTGGGCTCA TCATTTTCCAAATGTGGATATGTTTAATAGGTGTCCTTTTATCATACTAG ATTCTGAAACAAGAGAGGCCCATGGCTATGTCATAAGATTGTATGATGTC ACAACATCCCCCTCAAAAGTCAAATATTTCAATGCGGTGATTGATAATGG TATACAAGAATCAAATATAGTGTGCTACAATCCTGATCTTCATGAAGCCT TTTCATCAGCCAAACTCAAGGATTGTCcaatcaaaatttctaaattcacC GTTGAAAATGATCAATACAGAAATCAAACTAAATTCAAACTTGGTTCTGC AGGTAATGCTGAGTTTTCGGACATGAACATTCCTTATAACTTAGttgcaa aaaaattagaatGGGTCAATGCATTTACTGACTTGATCAATGTTGAGAAT ATCGCACTTGAGAGTATCATTAACGTTGCGTGTCATGTTACTCTTGTTGG AGAAGCCTTTGACGAAGACACAAAGTTCGGCAGAAAGAAAAAGATGAATG TAAGAATTCATGACAATACCATAACAGAAAGTATCCGGCTAGTTCTGTGG GGTAACCATGCACAGAAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGA ACTCAGAGTAAAAACGTACAATGGAAGATATCTGACCACAACGGCCTACA CCGAGATAACCCAATCTAATGAATCATATGAGGTGAGATTGGATGATAAT TACAACTCTCTTAACCAAGAAACTATTGTTGCCTTCCCTGCAATAGGAAT AAACAAACTGGAAACCAATTATTATTGTTCCATCTGCAACCATAAAGTTA TCAAGCTTGGCAAGTATGGCATGTGTAACAAATGTCCCATGAAAGCACTC CTCggtgagaaattttttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGA AAATGTAATGGTCACATTTCCACATAACATTTTCATTCAATTAATTGAAA AGGTCAATGCAGATCATAATGATCTAGACGACATTGAGGAAAAACTTCTG GTTACAAAAGACCTTTCTGTTAAGTACAAACAAATGTCAAGAATTGCTAC TGCAATCTTATAAATTTGTGACTTAGAGCAAATGGGACTCATCGTGTTTT TTGTTCATTTATCTTTCAGTTTATATTTTATCTGATTCTACATCATCATT TTGTACAGTAACATATATGTAgatgtatatatatatatctatATAGATTT TATCAGTTTTTATTGATGTAAGCCTAGTTTGTGCTTTTGAACCAAAGAGC TTTTACCATTTTAATTTTAACACGTCCTTCTGCCCCTTACTGACAGTAAA AGTACGAAATAGACTTCTCCATATAAATCAATTAAATGCATAACTTGTCT TAGAACtcgtttcttctttttgttgtaAAAAAGCTTCTTTTTTTCAGTAA GGATTAAAATGGCAGTCTTgtaaatagcaattaaagtttgGCATTTTCTA GATAGATCGTTCTTATTTCATACTACATATTTTTTAGGATaggatttttt ttatcataaagCTAGGAAAAGGTGTACTTTCATTTTAAATGTATTCTACT GGTTAGAGTTTTTAATTTGACTGTATACAGATTTAGATGTGAATAATTTG TGTAACC

Coding sequence (CDS) from alignment at scaffold_336:29663..33569+

>TCONS_00060156 ID=TCONS_00060156|Name=TCONS_00060156|organism=Clytia hemisphaerica|type=CDS|length=5196bp|location=Sequence derived from alignment at scaffold_336:29663..33569+ (Clytia hemisphaerica)
ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC
TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT
TCAAAACGGATTCAGACTCCAACCAAGTCACTAACCATTCTACAGACTCC
AACCAAGTCACTAACCATTCTACAGACTCAAGACAAGTTGAACCTGCAAA
AATCAACTCTCCTGGAAgATCTACTGAGGATGATAATGAAGCCCCTCCTC
CTTCAACTCctaaaaaacaaagaatgaGCTTTGCAGATTCTGAAACAAGA
GAGGCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTC
AAAAGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAA
ATATAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAA
CTCAAGGATTGTCcaatcaaaatttctaaattcacCGTTGAAAATGATCA
ATACAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGT
TTTCGGACATGAACATTCCTTATAACTTAGttgcaaaaaaattagaatGG
GTCAATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAG
TATCATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACG
AAGACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGAC
AATACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACA
GAAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAA
CGTACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAA
TCTAATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAA
CCAAGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAA
CCAATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAG
TATGGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCggtgagaaatt
ttttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCA
CATTTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGAT
CATAATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCT
TTCTGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAAA
TGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTCT
ACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAATT
CAAAACGGATTCAGACTCCAACCAAGTCACTAACCATTCTACAGACTCCA
ACCAAGTCACTAACCATTCTACAGACTCAAGACAAGTTGAACCTGCAAAA
ATCAACTCTCCTGGAAgATCTACTGAGGATGATAATGAAGCCCCTCCTCC
TTCAACTCctaaaaaacaaagaatgaGCTTTGCAGATTCTGAAACAAGAG
AGGCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTCA
AAAGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAAA
TATAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAAC
TCAAGGATTGTCcaatcaaaatttctaaattcacCGTTGAAAATGATCAA
TACAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTT
TTCGGACATGAACATTCCTTATAACTTAGttgcaaaaaaattagaatGGG
TCAATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAGT
ATCATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGA
AGACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACA
ATACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAG
AAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAAC
GTACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAAT
CTAATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAAC
CAAGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAAC
CAATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGT
ATGGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCggtgagaaattt
tttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCAC
ATTTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATC
ATAATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTT
TCTGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAAAT
GCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTCTA
CCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAATTC
AAAACGGATTCAGACTCCAACCAAGTCACTAACCATTCTACAGACTCCAA
CCAAGTCACTAACCATTCTACAGACTCAAGACAAGTTGAACCTGCAAAAA
TCAACTCTCCTGGAAgATCTACTGAGGATGATAATGAAGCCCCTCCTCCT
TCAACTCctaaaaaacaaagaatgaGCTTTGCAGATTCTGAAACAAGAGA
GGCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTCAA
AAGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAAAT
ATAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAACT
CAAGGATTGTCcaatcaaaatttctaaattcacCGTTGAAAATGATCAAT
ACAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTTT
TCGGACATGAACATTCCTTATAACTTAGttgcaaaaaaattagaatGGGT
CAATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAGTA
TCATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGAA
GACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACAA
TACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAGA
AGATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAACG
TACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAATC
TAATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAACC
AAGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAACC
AATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGTA
TGGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCggtgagaaatttt
ttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCACA
TTTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATCA
TAATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTTT
CTGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAAATG
CTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTCTAC
CACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAATTCA
AAACGGATTCAGACTCCAACCAAGTCACTAACCATTCTACAGACTCCAAC
CAAGTCACTAACCATTCTACAGACTCAAGACAAGTTGAACCTGCAAAAAT
CAACTCTCCTGGAAgATCTACTGAGGATGATAATGAAGCCCCTCCTCCTT
CAACTCctaaaaaacaaagaatgaGCTTTGCAGATTCTGAAACAAGAGAG
GCCCATGGCTATGTCATAAGATTGTATGATGTCACAACATCCCCCTCAAA
AGTCAAATATTTCAATGCGGTGATTGATAATGGTATACAAGAATCAAATA
TAGTGTGCTACAATCCTGATCTTCATGAAGCCTTTTCATCAGCCAAACTC
AAGGATTGTCcaatcaaaatttctaaattcacCGTTGAAAATGATCAATA
CAGAAATCAAACTAAATTCAAACTTGGTTCTGCAGGTAATGCTGAGTTTT
CGGACATGAACATTCCTTATAACTTAGttgcaaaaaaattagaatGGGTC
AATGCATTTACTGACTTGATCAATGTTGAGAATATCGCACTTGAGAGTAT
CATTAACGTTGCGTGTCATGTTACTCTTGTTGGAGAAGCCTTTGACGAAG
ACACAAAGTTCGGCAGAAAGAAAAAGATGAATGTAAGAATTCATGACAAT
ACCATAACAGAAAGTATCCGGCTAGTTCTGTGGGGTAACCATGCACAGAA
GATCACAGCGAGTGGCTCCTACCGCTTCAAAGAACTCAGAGTAAAAACGT
ACAATGGAAGATATCTGACCACAACGGCCTACACCGAGATAACCCAATCT
AATGAATCATATGAGGTGAGATTGGATGATAATTACAACTCTCTTAACCA
AGAAACTATTGTTGCCTTCCCTGCAATAGGAATAAACAAACTGGAAACCA
ATTATTATTGTTCCATCTGCAACCATAAAGTTATCAAGCTTGGCAAGTAT
GGCATGTGTAACAAATGTCCCATGAAAGCACTCCTCggtgagaaattttt
tgatgtcaaaGTTTCCTTTAAAAATGGTAGTGAAAATGTAATGGTCACAT
TTCCACATAACATTTTCATTCAATTAATTGAAAAGGTCAATGCAGATCAT
AATGATCTAGACGACATTGAGGAAAAACTTCTGGTTACAAAAGACCTTTC
TGTTAAGTACAAACAAATGTCAAGAATTGCTACTGCAATCTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037850XLOC_037850Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060156-exon-scaffold_336-1491911889:29663..29977TCONS_00060156-exon-scaffold_336-1491911889:29663..29977Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1510915933:29663..29977TCONS_00060156-exon-scaffold_336-1510915933:29663..29977Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1575043694:29663..29977TCONS_00060156-exon-scaffold_336-1575043694:29663..29977Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1491911889:30140..30241TCONS_00060156-exon-scaffold_336-1491911889:30140..30241Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1510915933:30140..30241TCONS_00060156-exon-scaffold_336-1510915933:30140..30241Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1575043694:30140..30241TCONS_00060156-exon-scaffold_336-1575043694:30140..30241Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1491911889:31569..31637TCONS_00060156-exon-scaffold_336-1491911889:31569..31637Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1510915933:31569..31637TCONS_00060156-exon-scaffold_336-1510915933:31569..31637Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1575043694:31569..31637TCONS_00060156-exon-scaffold_336-1575043694:31569..31637Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1491911889:32013..33569TCONS_00060156-exon-scaffold_336-1491911889:32013..33569Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1510915933:32013..33569TCONS_00060156-exon-scaffold_336-1510915933:32013..33569Clytia hemisphaericaexon
TCONS_00060156-exon-scaffold_336-1575043694:32013..33569TCONS_00060156-exon-scaffold_336-1575043694:32013..33569Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060156-proteinTCONS_00060156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_336supercontigscaffold_336:29663..33569 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.812467 0.999787 0.438056 5.26623e-10 28.6436 18.2437 12.6839 13.5043 4.61324 8.60165 6.80069 7.36925 4.43856 4.67629 5.62403 4.20823 4.4582 3.57225 5.92231 9.64021 4.50315 4.98716 3.92008 5.0979 0 0 11.1929 6.42598 12.3474 12.6726
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR031657REPA_OB_2
IPR012340NA-bd_OB-fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060156 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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