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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060109 ID=TCONS_00060109|Name=TCONS_00060109|organism=Clytia hemisphaerica|type=transcript|length=695bp
taGAACACTTTTTTTaaccactttcgatttgaatctGATTCGCGTTGACG
CTGACGCTGACGATACGAAACTGACGCTGGCTTCATTTTGGTCATATTTT
CACCAGGAGAAAGGAGGACGTTAGACTTTTAGAGACCTTTAAGATATTCA
AATTACTTGATCCAAAACTTACTAATGATTTAACATCTCTTAACTTGATA
GTGCAGTGATTGAAGCCGATACCATTGGTCCACTTAAACAACCAAGCCTT
TCCACTGTTCATAACTTGCCAAgtattcatccgaataaaatatcaacatt
ttgaCCAACTTTTCTTCTTTATAGACGGggtttggagaaattttggatTG
GTTACACAGACGTTGTCAACGAAGGAACATTCAAATGGACAGACCATACC
GAGTATGGTTTTACTCTTTTCGCTGCTGGAGAACCGAACAACGCTGGTAG
TGAACACTGTGTTTACCAACGAAATACTGGATATTGGAACGACGCTAACT
GCGGACTAAAGGTTGGATATGTTTGCAAGAAACCATACTTCAATCCTAAC
GGGGGTGGTAAGAGCTAtcgattctttaaagaatggaGGAATTGGGATAT
TGCACAACAAACATGTGGACATTTTGGTGGAAATCTGGTGACTATCGATT
CAGAAGCTGAAAATGAATTCCTCTCTCAAGAAAGTTTAATAAGGT Run BLAST on NCBI transcript from alignment at scaffold_334:213..1497- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060109 ID=TCONS_00060109|Name=TCONS_00060109|organism=Clytia hemisphaerica|type=transcript|length=1285bp|location=Sequence derived from alignment at scaffold_334:213..1497- (Clytia hemisphaerica)
TAGAACACTTTTTTTAACCACTTTCGATTTGAATCTGATTCGCGTTGACG
CTGACGCTGACGATACGAAACTGACGCTGGCTTCATTTTGGTCATATTTT
CACCAGGAGAAAGGAGGACGTTAGACTTTTAGAGACCTTTAAGATATTCA
AATTACTTGATCCAAAACTTACTAATGATTTAACATCTCTTAACTTGATA
GTGCAGTGATTGAAGCCGATACCATTGGTCCACTTAAACAACCAAGCCTT
TCCACTGTTCATAACTTGCCAAGTATTCATCCGAATAAAATATCAACATT
TTGACCAACTTTTCTTCTTTATAGACGGGGTTTGGAGAAATTTTGGATTG
GTTACACAGACGTTGTCAACGAAGGAACATTCAAATGGACAGACCATACC
GAGTATGGTTTTACTCTTTTCGCTGCTGGAGAACCGAACAACGCTGGTAG
TGAACACTGTGTTTACCAACGAAATACTGGATATTGGAACGACGCTAACT
GCGGACTAAAGGTCAGGCGTCGTTTACTCTACTACTTCTTTTTTATAATT
GGCCAACATATCTTCTCCAATAAGAAGTTTGCCCTGAAATTCAACTCAAA
CTCCACATGTTGATATATCCTAACTTCTCTGAAACTTCGGAAAATATCTT
TGGAAATTTGATCTGTTTAACAATTAAAGTTTCTCAGCCATAGAAGTAAG
TGTTATGGTGCCTTCATTTCTCCCTCTGACTAAAATATTTTCACTGGGTG
AGACAGGAGTGTAGATGTCCGAAAAAAGGATCTCCAGAAAAAGCATTTCT
TTAGTTATATTGCTCCACCTTTGGATCCATCACAGCGGTTCTGTTGAAAT
AATGGTCCAAAGTNAAAAAGGATCTCCAGAAAAAGCATTTCTTTAGTTAT
ATTGCTCCACCTTTGGATCCATCACAGCGGTTCTGTTGAAATAATGGTCC
AAAGTCTCCTCGTTTTAAGTAAACACTATTTTTGCAACCATGTGGAAACC
TTTGGTCACTTTGAGCAAATAGACTTTTTCAGACAAAAAAGGTTTTCCAA
AGCATCACTTTCTATGAGAATAAAGATACATTTTCTACTCAAATCTAATA
GGTTGGATATGTTTGCAAGAAACCATACTTCAATCCTAACGGGGGTGGTA
AGAGCTATCGATTCTTTAAAGAATGGAGGAATTGGGATATTGCACAACAA
ACATGTGGACATTTTGGTGGAAATCTGGTGACTATCGATTCAGAAGCTGA
AAATGAATTCCTCTCTCAAGAAAGTTTAATAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060109-exon-scaffold_334-1575043694:987..1497 | TCONS_00060109-exon-scaffold_334-1575043694:987..1497 | Clytia hemisphaerica | exon |
| TCONS_00060109-exon-scaffold_334-1575043694:213..396 | TCONS_00060109-exon-scaffold_334-1575043694:213..396 | Clytia hemisphaerica | exon |
| TCONS_00060109-exon-scaffold_334-1510915933:987..1497 | TCONS_00060109-exon-scaffold_334-1510915933:987..1497 | Clytia hemisphaerica | exon |
| TCONS_00060109-exon-scaffold_334-1510915933:213..396 | TCONS_00060109-exon-scaffold_334-1510915933:213..396 | Clytia hemisphaerica | exon |
| TCONS_00060109-exon-scaffold_334-1491911889:987..1497 | TCONS_00060109-exon-scaffold_334-1491911889:987..1497 | Clytia hemisphaerica | exon |
| TCONS_00060109-exon-scaffold_334-1491911889:213..396 | TCONS_00060109-exon-scaffold_334-1491911889:213..396 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_334 | supercontig | scaffold_334:213..1497 - |
Blast
The following BLAST results are available for this feature:
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