TCONS_00060107 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060107
Unique NameTCONS_00060107
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1524

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060107 ID=TCONS_00060107|Name=TCONS_00060107|organism=Clytia hemisphaerica|type=transcript|length=1524bp
TTTTCATATAaataaatctcaaaattagATTTACTGTTCTTATTTCTAGG
TGAACAACTGCCTTCCTATCAAGCTCTGATGTTCGTGGCATGTCTCTAAA
GCATGGCAAGAAGAGATCCCAAAGAAGATATCAGACAAATCAGTTCAAAA
GCAGATTTATGAAAAGCTTCACTATCTACGGGATATAAtggatataaaaa
atatttgagaacTACCTGTCTGACTTCAAAAACTCACTTAGTCTTTCTGG
GCTATGGAAATGTTTTGCTGATTACTTTGAAAAGCATAGGTGGATTCGGC
AAAGCAGTGGGCATATTGTTACCGAATAGGGATTGGGGTGAATACAAACA
TGCATGTGGAAGCCTTCCATCGGGTCATCAAGTATATTTACCTCCAAGAT
AAACATAATCGTCGATTGGATGTTTGCCTTTTCCAGCTTATCAAATTTAA
TcgtgacaaaatatttgagcGATGCACAAAACAAACTAAAGGGAAACTTA
CTCATAAATCTGGAATGATTCATCAAAGACATAAAGAAAGTTTGTTACTA
AAAAAGTCAAACATAAGCAGCACAAGTGAGAAGTTGTGGATTGTCAAATC
TGAAAATAGACAGGCAGAGTACAACATTGAAATGGTTAGTGAACGATGTA
CAAAAGAATGCAAAATCAAATGTTGTCAATGTCAAGCCTGTTCTcacatg
ttttcatgcaaatgtatggattttttaaccaaaaacaTTCCTTGCAAACA
CATAATTTTGATCGCCACCATGTTAGCTTTGGAGACTGAAAAACATCTCA
ACAAGGATGGGTTGGACACAAAATCAGAACAGCCTTTTGACAGCTTAGAT
GCTACTTTGAGTTTTATAGATGGATCAAAACCAATCAGAACGGATGAACT
CAAAGACAGAATTACACGTAATCTCCTCACACTAATTGAGACAACCAAAA
ACGACAATGACGAAGCACGTTTAGTTCAACTTGACATGTATATCAATACA
GCTAAGCACACCTTTTCTGCTTTACTGAAACATAAATGTGACGCCATTCC
TGTCCTACAGTAAATAAACAGTAATCAGAAGATTCAACGACAACCAAGAT
TTTTTTCAACGAAGACAAAACCCAAACCATAAAAATTCCGAATGGCTGGC
CCAGATACAGATGTAAAAAGGAAGCTTCAAGACAGATCTAATTGGaagaa
cttcaaaaatgaatcACTACCAGTTTCGGCAGCTAAAGCATCTCAATCTG
ATACGCAAGTCAACGATCACACAGGCTCCCACAAAGCGAAACGTATccag
agaaaaagaaaacatgatgCTGGAAAATGACACCGAAAGATAACTTCAac
aatatcaaatttttatcttgtattagattttattttcaaaagattacGGT
AAATTCAGTTTGAAGCTTTAATATtcaatataaataaaatttgtACTATT
CGTATATACTTTTgatacttactttttcttatAAATTCGAACCAACTGAT
TTTTTAGCATTCTACGATTTCGAT
Run BLAST on NCBI

protein sequence of TCONS_00060107-protein

>TCONS_00060107-protein ID=TCONS_00060107-protein|Name=TCONS_00060107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
MHVEAFHRVIKYIYLQDKHNRRLDVCLFQLIKFNRDKIFERCTKQTKGKL
THKSGMIHQRHKESLLLKKSNISSTSEKLWIVKSENRQAEYNIEMVSERC
TKECKIKCCQCQACSHMFSCKCMDFLTKNIPCKHIILIATMLALETEKHL
NKDGLDTKSEQPFDSLDATLSFIDGSKPIRTDELKDRITRNLLTLIETTK
NDNDEARLVQLDMYINTAKHTFSALLKHKCDAIPVLQ
Run BLAST on NCBI

transcript from alignment at scaffold_334:346994..369069+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060107 ID=TCONS_00060107|Name=TCONS_00060107|organism=Clytia hemisphaerica|type=transcript|length=22076bp|location=Sequence derived from alignment at scaffold_334:346994..369069+ (Clytia hemisphaerica)
TTTTCATATAaataaatctcaaaattagATTTACTGTTCTTATTTCTAGG
TGAACATCTGCCTTCCTCTGGTGTTCGTGGCATGTCTCTAAAGCNTATTT
CTAGGTGAACAACTGCCTTCCTATCAAGCTCTGATGTTCGTGGCATGTCT
CTAAAGCATGGCAAGAAGAGATCCCAAAGAAGATATCAGACAAATCAGTT
CAAAAGCAGATTTATGAAAAGCTTCACTATCTACGGGATATAAtggatat
aaaaaatatttgagaacTACCTGTCTGACTTCAAAAACTCACTTAGTCTT
TCTGGGCTATGGAAATGTTTTGCTGATTACTTTGAAAAGCATAGGTGGAT
TCGGCAAAGCAGTGGGCATATTGTTACCGAATAGGGATTGGGGTGAATAC
AAACATGCATGTGGAAGCCTTCCATCGGGTCATCAAGTATATTTACCTCC
AAGATAAACATAATCGTCGATTGGATGTTTGCCTTTTCCAGCTTATCAAA
TTTAATcgtgacaaaatatttgagcGATGCACAAAACAAACTAAAGGGAA
ACTTACTCATAAATCTGGAATGATTCATCAAAGACATAAAGAAAGTTTGT
TACTAAAAAAGTCAAACATAAGCAGCACAAGTGAGAAGTTGTGGATTGTC
AAATCTGAAAATAGACAGGCAGAGTACAACATTGAAATGGTTAGTGAACG
ATGTACAAAAGAATGCAAAATCAAATGTTGTCAATGTCAAGCCTGTTCTc
acatgttttcatgcaaatgtatggattttttaaccaaaaacaTTCCTTGC
AAACACATAATTTTGATCGCCACCATGTTAGCTTTGGAGACTGAAAAACA
TCTCAACAAGGATGGGTTGGACACAAAATCAGAACAGCCTTTTGACAGCT
TAGATGCTACTTTGAGTTTTATAGATGGATCAAAACCAATCAGAACGGAT
GAACTCAAAGACAGAATTACACGTAATCTCCTCACACTAATTGAGACAAC
CAAAAACGACAATGACGAAGCACGTTTAGTTCAACTTGACATGTATATCA
ATACAGCTAAGCACACCTTTTCTGCTTTACTGAAACATAAATGTGACGCC
ATTCCTGTCCTACAGTAAATAAACAGTAATCAGAAGATTCAACGACAACC
AAGATTTTTTTCAACGAAGACAAAACCCAAACCATAAAAATTCCGAATGG
CTGGCCCAGATACAGATGTAAAAAGGAAGCTTCAAGACAGATCTAATTGG
aagaacttcaaaaatggtgATTTTCTAACCTTTATGTAAATAAATTATCG
ATCTCGTGAAACACCTTAAAGTGGTCGAATCACTTCTGTGCCTAAACTAA
AATTACCTGTAAactaaaatattcaaataaacaaatgaaatgaTTACCTT
ATCAAAAATGTGCCCTACTATAAATTGAATACTGTAGGTCACATGAAATA
CAAAAGGGCAAAGTTGAGCAGTTTTAAATAGAATCGTGTgacagtttttt
tcaaaattctgaacCAAATTGGGATGGTAAATTACAATGTTTACAATGCT
TTACACAagaagcttttttccttcatttGTTACTTCACCATGTACAGATG
AAACTTGAGAGTACCGTGTAATTATTACtcattatcatttttctttttag
aatcACTACCAGTTTCGGCAGCTAAAGCATCTCAATCTGATACGCAAGTC
AACGATCACACAGGTAATTGTTTAAAATTCCACACTACAACAGATTTGAG
TGAGATGTTTTTGACATATATAGAAATTTGAacactaaagtctattcacg
ataagtgtgcactcttttttcatttaccgatAACtcttgaaggaattctt
caatctttataaatttggtatcattggaaagatattagttagtggaacaa
tttaaaataaaaaaatcttcaaaaaaattctaaaaatgaagatgaaaatg
aagaagaaaaaaatgaagatcttgtagaaaagtgctataactaccATTTT
CCGTGAAAtaaatccttgatcatcgaacgttattactgagaaaaaatttc
tcaaaaataatcattcagtcaaaagatatcaaacaaagttataagctgat
tgacgtctaaaaacgctgttttctgcagttttttgctgttttttggggtc
aatcacttattaactttgtatcataactttatattgaaaaaatatttaaa
tgaaattttttcacagtgacgatcttctaagatcaaaaaatctctccagt
gaaaatgaaagttatagcagtattctacaagatcttcatttttttcttct
tcattttcatcttcatttttggaatttttttNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatatctttccaatg
ataccaaatttataaagattgaagaattccttcaaaagttataggtaaaa
gaaaaaagagtgcacacttatcgtgaatagactttaggagCAATACCAAA
ATCTCAGGCCCTGAAAGCCATGACCCTTGAGAGACTTAAAAAGATTTAAA
AGCTGGACTTTACCGTCCACACATACAAAATCCAATATTTCCGAGAAGTT
GCGTGTTAAATTGTGCGAAAATAAACTTTGATATTATTTGACTTTCCAGG
CTCCCacgaagagaaaaagaaaacatgatgCTGGAAAATGACACCGAAAG
ATGACTTCAACAATATCATATTTCTAtcttgtattagattttatttccaa
aagactAAGGTAAATTCAGGTTAAAGCTTTAATATtcaatataaataaaa
tttgtACTATTCGTGTATACTTTCgatacttactttttcttatAAATTCG
AACCAACTGATTTTTTAGCATTCTGCGATTCCGATTTGACACCAGGGAGA
CTTTATAGCATTTTAAGAGCAACATGATTGTGATCTTATCATCAGAGAGA
CTTTATAGCATTCTGCGATTCCGATTTGACATCAGGGAGACTTTATAGCA
TTTTAAGAGCAACGTGATTGTAATTTTCTCATCAGAGAGACTTTATAGCA
TTCTACGATTCCGATTTGACACCAGGGAGACTTTATAGCATTTTAAGAGC
AACGTGATTGTGATTTTCTCATCAGGGAGACTTTATAGCATTCTACGATT
TCGATTTGACACCAGGGAGACTTTATAGCAATTTAAGAGCAACGTGATTG
CGATTTTCTCATCAGGGAGACTTTATAGCATTCTACGATTCCGATTTGAC
ACCAGGGAGACTTTATAGCATTTTAAGAGCAATGTGATTGTGATTTTCTC
ATCAGGGAGACTTTACAACATTCTACGATTTCGATTTGACACCAGGGAGA
CTTTGTAGCCTTTTAAGAGCAACGTGGTTGTGATTTTCTCATCAGAAAGA
CTTTATAGCATTTCATAGGGCTGTATTTTTGGGAGTAATAGCGTTGAAAC
TAGCTAGTAATCATGCGCACAGACTTTTATACAGGTACAAGGCAGGCGTC
AAGTCAATCAGCCTTTTTTCCGATCGCACGTTAACAAACTGCCCATAATA
TCTACTTTGCTGAAAGCAATACACGCGTCCGCAACAATCGAAAttttcga
ccaatcagaatTGGGAGACATTATAAGATTTAGCCGCAAGTGAAACAAAG
AAAGTCTGCCATATTTGTTATGGTTTAATGTTTTGACATgttacatttgt
tttgattttgtatctccACAAGAAAAAATCCTCGAttcccaaattttgga
attttaattTACGTATCTGGAAATTTTCACATTATGTTTACTCTGTAATT
TTGAGTTTGGGATTCTGAGAGGTTCGGGATATTACATTTCACGATTGGGA
TTTGAGTTTAAGTTAAATCAAACATACCTTGGGAAAACCAAAATCACAAT
GTGGAAAACTTGTATAAAACACTTAAAGCTAAAACAACCAACTAGGCTTG
GGATAATGCCGTTCCCAAGCTTGTGATATATATCTAGACTTTgtcataaa
atcaaaaacttgGTACTGGAAAACTCAAAATTACATAAGTTTGGGATTTG
CAATTTCCCAAACTTGTGATTTTGGGTTTAACTTTAAACCCTTTTAAAAC
ATTAAATCTTTGTTTCTAAAACCTCGaatacaaaaaatctgaaaatatat
CACCTAGAAAGTTTAGATTAGGAATATCGATTTCAGATTTGTGAAAATCA
ATTTCCCAAACTTGTACTACGCATGCGTAAGAAAACCACAAGTGAATATT
CAGTCGAAACTGTTCAGATTATATGCAATTCATAACATTATAAGGGTGTa
ttcgatcagtgtgtaacacaacgctaaaggtgaggcgtcccGCAAGGGTG
GCCTCAttcgttcgcaatggacttgcgtcgcaagggctcagtggaATCGT
TAGTCGCCGTGAGGCCGTTAAATCGGTGCTATGTCGTAGTTCAGCTGGTG
TGACAAAAAGTGCCGTGATTCTCAAAGCAGCGCAAGTACATGACAGAACG
AATGGGAGCTATCGAGCTAATGCTCACAaatgatcgaatacatttaaaaa
tttatcaaatacaaATCACATTTGGGTATTTGAGATTCCCAATTGTGTTA
TACAGTATcacaaagtcaaatttttgtgCTGAGTATTGGTAATAGCCATT
TTCGTAGTGTGAAATAGAGAGCTTTGTGATATTGGGATTCACAATCTACG
TACAAGCTGCACAATCCCAAGCTTGGAGTTGGTTTGGTAAATACATCATT
TTCCGGATCCGGAAATACGTATTTCCTAAACATtgggatttgaagatttt
ttcctgtgccCGCCCGCTTGCATactgtttgtttacaaatttcgtaaATA
CTTTTGTGTCCCTTTATAAAAGATAGGTCGAgtcatgaaaagaaaaatga
catGATTACAATCACTTAGTGATTCGATGTTGGGAGTAGTGCAGAATGTG
TAGTAGGATGgtaggttttcaaggttttatgGGCCATTCACCGggtattt
ttaaggtttttcgaGACTGAAATGGGTTTAAAAGGTATGTCACGCATTCC
CCAAATtcgtgctatttcaggccttaaaacaggtttttttcgCTTATCTA
TTAacgattttggccaaaaatatcctgcaaccgccaaattaatttcccgt
caaaatttcttcctttaactttAAGGTGGCTACTTATTTGAGTACTAACC
TATGAGTACATTCTAAATGAATTTGGAGAAAAGATGGAAAATATTGCTGA
AAATTAGGACAAAATACTCGAACAATAATAGGAGCTTTTTCCGAAATATG
ACAAAAGTGGTTACATTAGGAGCTTCTTTCGTGTTTTTGAAGGAAACCTT
TTTGTCCaggtcttattttttttcagtgaaaaagtttaacgtgaAAATCA
AATCGAATGCGAGTTAAGTATTCAATGCATTATACAGAGGAATTAAGTCA
TGTACGTACTTTTAAAATACAATTGTACTagtcaataaaaacaacaaaga
agtCTTTTTCTAAGTCCTATAAAATATGTACCAGCAAATGAAATGAGCCT
CTTACCAGAAGCTCGCAAATACATATACGTAGcaataaaatacaaagaaa
atctagcttcataaaaataaaacagacATGCTAGTGATAAAAATCCTTTA
AGTCctataaaatattaaaaaaaagtacTAAGTAAATGAAATTTGCCTCT
TACGAGAAGCTTGCAAATATGTATGCATAGCAATGAACTACAGAAGAAAA
TCTAgcataaaaataaaactgacATGCTAGTGATGAGCATAAACCGAATC
ATGTTATTATGTTAACCTTTGTACAAAGTAACAAACGAAACCTACATCTT
GCCAGAAGTACGTGAAGTTAAAAATGTTGGGaaagttaaaaacaaacaaa
accatGCTAAATAGTGCtaagtaaaaagaaaatgaatgacACTTTGTACA
GGGAAGAACTATCAAATGGAATCACTATTTTGCCAGGAGCATGTAAATAt
acaaatgaaaaatatcaaaatggcTAATAACTGGATCAGTACGCGTGAAT
TCAATGTGAGCAAGACAAATTAGGAATCAAAAGACATAATACTgagaatt
aattttcaaaaataccaaTTAAGTTAAAACGCATGGATAGTTACAATAAG
GTAAAATGATCCAGTTTTCATAAATGCATGTTGTATAAAGACTTAAAAAT
GTTAGTTTCAATAACTGATATTTTCTTAGTCTACAATCATAAGTCTTCAG
TAAATATCGCCAACACGTTCTTTTTTTGCATATCAAACTCAATAGCGAAG
TCCTTTAATGATAAGATGTGAGTTTTTAGAAGGGGAGCGTTTTCTTTCAT
TTGATCGAAGATTTGGGATATTTGTTGGTCAAAGAGAGTGAAACGCTTTA
AATCTTCTCCGTCTGATGGTTATACATCTAAGTGACAAATCATTGATGTT
CTACTTGTGTTAACGAAGTCAGCAATAAATTCCCGCTTGCATTGAGGACA
CACAAACATCCCAACAGTTGAGGATTGCTCCAATTTCTTTTTCGTGCAGA
ATAAACAATTGAGAAACTCTTCTATTTTGACAGCGATAACTCGTTTGCAT
GTCATTGATTGGAAGTGATCGTCTTTGTCCTCTTCTCCATGTTCTGTAAT
GTCCAAGTTAATATTAAGATCTTCAATCAGGAAACATACCGATGTGGAGA
AGTTTGTTGATAATTCAATTTCTTCGTTAAACAATTTGTTTGTTGCTGAG
TGTAGTTGAATTAGTTATTGCTCTTTAATTAGATCTATCAAGTCAGCCCA
AAAGGTAAATTTGAGGGTTTTGGTTCCATCAGAAAAGATTCCTTCGCGCA
TTCGTTCTGATTTATTATGACCACTTTTTGTGTAATAGGTGTAATGTGTA
ATATCCACCTCTTTAGTGAATTTGACTTTCCCCACAGCTGAGAGTACATT
TCCTTCATCATCAATATCAATTAATCGTACTGCGTCGGCATCACTTATTG
AAAAGTTCATAGGAATAGCATTAACAATTCTAACTGGCATCTTGTTGTGG
AAATATGTAATGAATTGTTGCCTTACAAATCTTTGCTAGACTACTGAGTG
AGTACTGAGTACagtagagagagagagagttttCAAAATGTCTGCTTCGT
CAAAAAGCGTGACTTTGTTTACTAAAAAATTACCTGCATCTATCATCCAA
AAATCGTTATCGTTTCAGTGGTTAAAGCGCTAAAGTTAAAGCAAGGAAAA
ACGTCCGCTATGCATGCTAAAAGGGAAGCATTGAATGCCATCCTCGCTCA
CCCTCAGGCTCGCTGCGGTGGCAATAACAgtaattattcatttttttcta
gaaCTGACAGATGTCACTGGTTATGTAGAACATGTCAGCCCAATCGAATC
AACAAAATTCTTTGAAGTCTATGTGTGACAGTGAAATCAGACTGGTAGTT
TATGCTCTACACACCAACACTCAACATTTTTAGACACCCTAGGCAACGGA
GTAACAATAACACATCTTGCAAGGTCgtcaagtggaaacggtgactTGGC
ATATACAGATGCATCTAAGATAATATATGTGACACCACCATTTGAAGGGG
TGAGTCTGCCCTTGACagtctaaaaaatcaaaactgccaTGATCGAATCT
CCTATGTACAGTCGCGTACACCTGCAATTTCTCGTTACTAAAATTCATAC
ACCAGGAATGGGCAAGGAGTTGTTGGCATTCCAGGAATTTACCATAACTG
ATAATAGTTTACCAGACCCAATAACATTAACTGTCTATGGTGACCTCATT
GGAAACTTTTACAGtaacaaatgttaaaatatgaCGTACGTTACCATAAG
CAAATTTACTGGTAAGCAAATTCTCAAAGCTTCTGATCGGGCTTAAGTGT
CAAAGTTAGAAGATGACacgattgaaaatttaaaaatacaaacatagaaa
taaacttttaaactaaTTGATTATTTGTTTCCTTTTAACACGCCACTCAC
ATTATTGGTATGCCTTTTAAACGAGACCTTTTGATTACGTCACGGAGGCT
GTTGAAACTGTAGCTGTGTTTACTGAAGTGAATTATAAACCATTTTCTGA
GTGAAAAAGTGGTTATTTCTGTTCAAAACTGATGTAAAGAGTGGTGTATT
ATAATAGATTTGgggtatatattttttgaatactTACCTAAATGTATTCT
AGGAAAGCGCTTTATATTCAAGCTACGAAGAATATGGTAGCAGTGGAAAT
GAGCCAGATTCTGAGAGAGAAGATGGAGTAAGCAAAAATTGAAGAGTGAT
ATGGACCTCATTAATGAGCTGAAAACAAGCGAGAGTGACACCTCTTCATC
CGAAGACAAAAGTGACTATGAAACTTGTTCTGAAGGTAGAAACGGCAGTT
TAGACTGGTGTGAGTGTGAGCAGGGGGGTCATAtcacaattactaccgtg
gtggtctaaattttcaaaatttgaaaaacagttACTACCCAAAGGTAGTA
ACTGTAGTTGAGGGTGGTACCAAATTCAGGTCTGAAGAAAAACAGTTACT
ACCTATGGGTTAGTTGCGGGTGGTACCCTTtctcaaatttgatgaaattg
attacTACACAAAGTACTTTTTCACTCTAAAGTGCCTGATTTTAGCCCAT
ATACCctattttggggttttcagaTGTACAATttctaccccctggaaatc
CCCCACTGTTTATTAGGAGGCAACTGACTGTTGGTTTCAATCAGTTACCA
TCTTCTGATATTTTTAAACACTTctctttttggattttgaaatagNAAAT
CTCCCACTGTTTATTAGGAGGCAACTGACTGTTGCTTTCAATCACTTCTG
ATATTTGTAAACACTTctctttttggattttgaaatcaaatattttcaaa
gcatTCGAAATGTTTCATAACACTAAAATCGAATGCAGTTTTAGGCTCTA
TTTAAATCAAGCTTTAACtttcaaaatgaaagaagatAACTAGGAGGTAA
AGGTTTCTGGAAGTAAGAATTTGACTTTCATTTACCACAGGAGAAAGATG
GCTTGCATTACTGTTAGGTTCATGATAGATGTTATTGAAATGATATCCTT
GATCTGCCTTGATAACAAAAACTTTATAACTTTCAAACCCTCTAACTTTC
AAAGGAAAAACCTTGTAAATGTAAACAGTGCTTTAATTTTAGAATGTGAA
AGTTTATAAACATTCGATTCAGCAAAAAAACATTGACAAAAACTGGACAC
TTCTGATTGCTGATACTTTATAAGTTGGCAAAATATGTTTCCTTTGTAAA
AGAATGTGAACGGGTAAGTTACAGTTGTAAGCATTTTATGATGTTTCAAG
TTAATTCAGGttggtttcaatttttttttttcgctgtGATTTGCTTTAGT
ATTCTTATATTTAAGCAATGTAGTTTTTTATTCGTTTCTTTGCATCTTAC
AAATTAGTATGGCTGCTGGTGTTTGTTTTTTGATGGGGGGGGAGGCAcct
aggcaaaatgggtgccgggcgggtatgtgcgagccaaaagggtccctttt
tcacaacTTCAAAAGTATCAAATTTTGTCTTGTTTGCTTTTTGATTTGCT
TTTCATTTATAAACCTGAAAAATGTTGCTTACAATGTACTTAAAATCAGT
TCCAATGATTAAGAGTCTAGgcttttaataaaaaaacgtcAATTCAATGC
AGCAAATTTGGTAAAAGGTCATTCTCCAAATTTTTCCTTGCGTAAAAAAG
AAGGAATCAAAACTTTTATCTTAATTCTAGGTCTTGGAGACTGGTGAAGG
TGTCCTGATCATTAAACGGAGACCTGGTTATAACGAAGAGCAGCGACCCT
CAAGCGACTATGGCGTCTGCAAATTTTGTCTTGGTTTTTTTTGTATCGTC
GGAGCTAGGGCGCCACTTGCTATCATGCGAAACAACATGTTCCTTTCCTT
ACCAACGTACAATGGAATCATTATGAGTGTAAATTCGCGAAAGGAAATTA
TTCCTTATCTTTTGGAAAACGGAATGGATTATGTTTTCAGCGAAAACTTC
TGTCAGGATGACCTTGAGAATTATTTTGGGAGACAACGAGCTATTGGAAG
ACGCAAAGATAATCCAAGTGTCAAGGACACAATCAAAAAATGATAGTATC
ATTAAATCTGGGTTTGAGACTAAGTCGATATGTGGAGCAAACTGCGAAAG
CAAAATGGACTTTTCTATCGATGAGACtccattaaaaaagaaaaagtgac
tTTGGAATTCCGAAACCTTTAAACGTTAATAGCAAGGGATTGTACTTAGA
TTATATTAGAAttttcttaaagttttttttcaatgctaaaaatcATACTT
CGAGTTGGTAAATGGTTGATTAAGTAATACATAAATACTGACGCTTTGCG
ATCTTTAATAAACaatattctttttgaaaatttattttattcagTTGAAA
AAATGGCGTCCGAAAGAAATAGCTTTTCCCTTTTTCCATTTGTCACAAGG
ATCAAGAATAGTTACTTAGgctattttatgaaaatatacaaattttgttt
attattttttatcctactattttaccaaaaaaatttcTAACTTGTCTATG
GTAAAAAAAGTACATTGAAAGCAGTATTCGTTTTTTTTCAGTATTCCAGT
CATTTCCGATCTAAGTTTTGTTTAAGCCAGACTCCTATTATATCTATTTT
TAACCAAGTACCAAAAGCTTTTCGACATTTGTCCAAAGATTTAACCCAAT
TCGTTGTTGGCCCGATCGGAGTTAAAAGAATCtaataaaattgatgaaat
gGTGATATTTTTCATCTTCTCCTCTGTTCCTCATAGCCGGCATTAAGTTG
AAAAGGGTTTGTCTTTGAAtggtacggaaaatcttgtgtttacctCACGG
AACTGCCATTTTTTAACTACCCGATCGCCTGGTCTTTTCCGCTACTTGCA
AAGGAATGGGAAACATAAGAAACGATGGTATGTTCATTGTTTCATGTGAC
ATGTTGCTATTGTTATTATTCAACTCGGGACAATAGTGTTCTAGACCAAT
GGGTTTAAGCCTTCGTAACAATTACCGTCGTAATCATGCCCCCGTTTCAG
AATCTTTTCCGCTATTTTTACGGGACAGCCGGCATGTGATCGGAAAAGGT
TTTTTTCTAAAGGTACAGGAAATCTTGTGTTTTACTGATGAGACCGACTA
ACTTTCtgaagcttatttttcaactacccgaaGTCCTTGTCTTTTTTCGA
TACTTGGCAGAAGAATCTTAGTGCGAAAACAGTAACCTTATACAAAATGA
CGGTATACAAGGGAAAGTCAAATAGGCGAAAAAACATCGATTTCAACGAT
gatgattattttttcaaaataatcgaGTCTTAATTAAATTTCTGAATTCC
AAGACAGGCTATTCAAACTACTCAAATCCTactattttctttctttctta
taTGATTAATCATTTTTTCAGGGCTTTTCCGAAAGTTTCATTTTTAGGCT
TACGAGgctcatacatgttttttataagcatatgtagGCTCAAATATGGG
GAAAATTAAGGATATGCCACGCATTACCTCGAGCCTATGAAAGGTATAAG
CTACTTTGTAGTATAGCTGGTTTGTTCTTTTGTGAAGCCATTGCAAAGAA
AATCAAATGTTTACCaataaaaaattcgaatgtttcataagaattcgaat
gtatatgaaaaattttgtttccCTCTTTCCCCACTTCCGTATATGGGCAT
TAACTCAACCAAGAATTCTATAGGCAAATTTAAGCATATTTTGAGCCTGA
TTCATTACCTTTTGTAAGCATCCTCGAATTtacctcaagcatttttcatg
aTTATTGAACTtattcgacctaagcatctctgggcctgttttcggatttt
tgtatacttataaaaaacatgtaccttGAAAGTGAAATTTGGAACCAGTG
GGAAGTAAAGTAAAATAGCCGATTAATTATGGAAAATcctcttttaaata
aaaatagcaaacagcttaaaaattagtcgtaaaaataaaaaacaaaagct
tTAACAAGTCATATGTTTTTATACATACAAACTACTTTCAAGAATAAAGT
TTCAAATACAAATTCACctcattaaaaaaatcttcaccGCCACACCACAA
CAAGTGCAAAATAAAAAGACCAGCCAAACTtgaccaaaatttactggttc
ttataaaaaatgtgttatAAATTTTACCAGTAAAAATCTGTATCATTAAC
CTTCCTTATGATCAATGTTTGGAAAACCTTACATGAAGGGAATtgtaaca
aaaatgaaaagtttgaataaaaataaattatgcaaaaaagataaaagagt
tTAAACATCATCCTTGTCTCCAGTCTTAAGTTCATTTCTTAATGAgcgtt
tttttccttttttggctTTAAGTTTGTGTTTTTCTCTGACATTTTTAGCA
TAGGAAAAGTCCCTGACACGTAGGTACAATCCAAATATTTGTTGGAGCAA
ATCTTTGCCAATATCACTATTAACAGATATCAAAGAATTATCCTGCAAAT
TTCGCCAATGTTGTTTCACAATCATGTTTTgcatcaaattttcaacaagC
GGTTTGTAGGGAATTTTGGTAACATGTTCAGCAGTGTGTTTTAGAAATAG
AAGCTCTGCTTGCTTTAAAGCCAGAACGATGTCCATTGACACATACCAAA
GACCACCACGGTCTTTGGAAAAAACAAGTTTGTAAGCTTctgttttatca
attttcattgatttGAGGAGCTGGATGCATTGCTGAAATTCATCTTTATG
CCAGTGCTTGCTTTTACGTAATTTacgataaattttttgaataacatGCC
CAGCAATGTACTGTAAAACATAAATATCTTTCTCTGTTAGAGTAACTTTT
GCTCCAGATGATGTAGTTGCAGATGATTTGTTTAACAGGTGCGAGATACA
TTTGTTTGAGACATAATGCAGTAGTATGTAACTTGCTCGTTTATTGGTTG
TAATTATTACcatttcaatcgaaattttacgaaatttttcaaggaaagaa
tGAATATCGAATCAGCCTGTTCATCTGTGGCTTCGAAACCCTCAAAGGAC
GCACGNTTTTACGaaatttttcaaggaaagaatCAACATTGCTTTCCTTG
AACTTAAGAATTTCATCCTTCAAAGAGGCGAATATCGAATCAGCCTGTTC
ATCTGTGGCTTCGAAACCCTCAAAGGAAGCACGAAAAGTCTCTGGATAAC
AGGAATCATTTGCAAGGTGGGTACAAGAATGTTTAATGAATGTCTTAATG
TCATTGGGTCCCAGTCTCTCCTTAGCAGCTTTCGTAATTTCTGCTTCaac
tttctctttttctctcaGCACTTCAAATGGGTGCTTCACAGCTTTATGTC
GCTTGATTCCACCTTTGGTTTTGCATACTTTGCCACAGCCTTCGATATCA
CACACATAGGTTTGCTTCGAACTTTCCACAAgctgaaaatagaaaagatg
tttttgataagatttttctCTCATAAAATCACCTGCTCTCTGATATAAAC
ACATTAAGAAAAGGGAGGCTATAAACAGATTAGCTGATACAACaggataa
ataaataaaataacattCCCAGTAAAAACATACATTATTATTAGGAGGAG
GAGGACTTAATAAATAGTCTGATGTCTGAAGTGTTTTAGTAATTAGGGAA
ATTCATCAAAGCAAAACacttaaaattgaaattactaATCAATTTTATGG
CGAGATCATGAATGAATTGATGtcctttttgatgaaaaatccaaagtaat
tcaaaaattttgccaaaatcacAGTCTGACCAGCACCCACTTCTATCATC
TTTTTTTGAAGAAGTAAACTTCAAACTTACATCTGATTCAAGAGAATTAA
CTTGTTGTAATATTTCTTCGTCACAATCAAAAAATCCTTCCTCGANatat
ggtacggcgagcgacgtacctgccgtacccggtgcggcgttccaagagtt
tcgcccaagaaaaaatttaaaatttagaatgcctagaattgcctgaaaac
gcatcatgtgcatcatgatgtgaattattttttaatcgttcgatgctgca
caagatgtttttagaactaccCATTTTTACTAATTATTAATACTAAttac
tgcagtatcagtgtGTTGTATTGCAGTAGCAATAaaagtgaatacggaga
gacgaccatatcatttagtgccgacagagaaaattttatctagactcatt
cgttggatgcagtatttgcatctcaaaagttgtcattaaaaaaatgcgcc
cgcagaaaaataacgaaaatatttgtttagatatcgtaaagttttgcttg
ttttgaataacctcaccatgacaataagtcaataggacatccaagattgt
gcaggcgaagcgagcaagaaaatttactggttaaaatagcggaatagact
tatctGTTTTGTAAATCTTcctgcatgaaactcatgaagaaactgaaagg
taaatagttttataccgaaataccgttttttattgataaaaatatcgaaa
taccgacaggcaatttaccgataccggtagaaaatgaaataccgtaatcc
cgtcgtttttttcttgtaataccgatttaccgggggtaaataggcccaat
accgtcataccgtaaaagtgaacccCCCCTTTACTGGTTTTGTTCATCTG
AAAGATGGTCTCACTGGAAAGGCAATTTCCAACATCATTTGAAAAAGGGT
CAATGATCTTGGTCTTGACATCAATCCATGTAGGGGTCAAAGGTTTGATG
GTGCTGGGAATGTTGCTGGTCaaaaaaaatactaagaaaatcGGGTATTT
TTCCTAAAAACAAGGCTCTCTACAAAAAATAAACGAATTACACACCGTCC
AAATCAACACCGATGGATGACGACATACCAAACAGCGATATCTCGTCGAT
TGACATATCTACAGTCGAAACACTGCCAACTTGTACTGTCAACAATTGCT
ACGACCCGGAAGAAAAATCTTCGCTAAAATGTACCAACACAAAATGTTTA
CGGCTTGTTCATTTCAAGTGTACCAAGTTACCAGCCTACCAAGTCCAGAT
CCATCTAAATAATCAAACTAAGCGCGCTTCCACCAATGTTAAAGGTACCT
TCATTTGCGTCAACTGTGTTGAAGTTTCGAAAGACGTTTCCTCCTTATGT
AGTAACGAAGAAGAAGATCTCAAAAAGATCATCCAAAGACGTGAtcaaaa
aatcgagaaaatcgaAGAAAGTAAAACCAAACTAAGCGANNNNNNNNNNN
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NTACCGATTCTAAAGTAGAGTTTAATCTCACTTTGGAAATGGTCAAAAAA
GAACTTAAAGGTCTCAACCCAAATAAGTCAATTGGTCCGGACGAAATTCA
TCCAGTTATGTTGAAGGAGCTAGCGGACTCCATAGCTGTCCCGCTCCACA
CAATCATGACTAAATCATTTGATGAAAGTACTCTGCCAGACGGATGGAAG
GTTGCACATGTGTCACCAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNggcacgaactttttttcgaaaggcacgaa
ctttttttcaaaaggcacgaagggcacgaaggcacgcaaggcacgaaaaa
aatcacactcaTCAATGGGCAACCTAATATAGAAGACGCTGAAAAATAGG
TTCGTCGAATaagatgatatagataaaaaaacACATAGGTCGATTTGTGG
GNagatttacagctgagaaatatagtgcactataaaaGGGTTgagtaaat
caagagaaaatgcactgaaagggaaCCTTTTCAACCATATTGAagttgaa
ctgcactgtaagggtacgattttgaaaagcagattttgcgcggcacatac
cgtcgtttcgaaatcgagtccccccccccggggtttttatgaattatgaa
tttcaaagacaaaaagcagctgaaatttgtttaaaaaaataagtaTACCC
TGCTCGCCAAAACTACTTATATGATTTAAAggcgttctaataaaaaaaag
tgtatgtagTTTTAAATCACCACCACCAAGTTTTTTAACCTCATGAAGCT
TCTggttaatttttttgtcattaactattttcaaaaggcacgaacttttt
ttcaaaggcacgaacttttttcaaaaggcacgaacttttttcaaaaggca
cgaacttttttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAAATTcaggaaatacgacttttttttatggaaatttcaggaaatatgac
attttccaaatttggaaaattcctGAAGACAGCTTTTCACCCAGTGAGAG
CAATGTGATATTGTGATTTTCTCATCAGGGAGACTTTACAGCATTCTACG
ATTTCGATTTGACATCAGGGAGACTTTATAGCCTTTTAAGAGCAATGTGA
TTGTGATTTTCTCATCAGGGAGACTTTATAGCATTCTACGATTCCGATTT
GACACCAGGGAGACTTTATAGCCTTTTAAGAGCAATGTGATTGTGATTTT
CTCATCAGGGAGACTTTACAGCATTCTATGATTTCGATTTGACACCAGGG
AGACTTTATAGCATTTTAAGAGCAACGTGATTGCGATTTTCTCATCAGGG
AGACTTTATAGCATTCTACGATTCCAATTTGACACCAGGGAGACTTTATA
GCATTTTNTATTTATTGTCTTTCCAGGCTCCCACAAAGCGAAACGTATcc
agagaaaaagaaaacatgatgCTGGAAAATGACACCGAAAGATAACTTCA
acaatatcaaatttttatcttgtattagattttattttcaaaagattacG
GTAAATTCAGTTTGAAGCTTTAATATtcaatataaataaaatttgtACTA
TTCGTATATACTTTTgatacttactttttcttatAAATTCGAACCAACTG
ATTTTTTAGCATTCTACGATTTCGAT

Coding sequence (CDS) from alignment at scaffold_334:346994..369069+

>TCONS_00060107 ID=TCONS_00060107|Name=TCONS_00060107|organism=Clytia hemisphaerica|type=CDS|length=714bp|location=Sequence derived from alignment at scaffold_334:346994..369069+ (Clytia hemisphaerica)
ATGCATGTGGAAGCCTTCCATCGGGTCATCAAGTATATTTACCTCCAAGA
TAAACATAATCGTCGATTGGATGTTTGCCTTTTCCAGCTTATCAAATTTA
ATcgtgacaaaatatttgagcGATGCACAAAACAAACTAAAGGGAAACTT
ACTCATAAATCTGGAATGATTCATCAAAGACATAAAGAAAGTTTGTTACT
AAAAAAGTCAAACATAAGCAGCACAAGTGAGAAGTTGTGGATTGTCAAAT
CTGAAAATAGACAGGCAGAGTACAACATTGAAATGGTTAGTGAACGATGT
ACAAAAGAATGCAAAATCAAATGTTGTCAATGTCAAGCCTGTTCTcacat
gttttcatgcaaatgtatggattttttaaccaaaaacaTTCCTTGCAAAC
ACATAATTTTGATCGCCACCATGTTAGCTTTGGAGACTGAAAAACATCTC
AACAAGGATGGGTTGGACACAAAATCAGAACAGCCTTTTGACAGCTTAGA
TGCTACTTTGAGTTTTATAGATGGATCAAAACCAATCAGAACGGATGAAC
TCAAAGACAGAATTACACGTAATCTCCTCACACTAATTGAGACAACCAAA
AACGACAATGACGAAGCACGTTTAGTTCAACTTGACATGTATATCAATAC
AGCTAAGCACACCTTTTCTGCTTTACTGAAACATAAATGTGACGCCATTC
CTGTCCTACAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037817XLOC_037817Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060107-exon-scaffold_334-1491911889:346994..347042TCONS_00060107-exon-scaffold_334-1491911889:346994..347042Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1510915933:346994..347042TCONS_00060107-exon-scaffold_334-1510915933:346994..347042Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1575043694:346994..347042TCONS_00060107-exon-scaffold_334-1575043694:346994..347042Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1491911889:347098..348259TCONS_00060107-exon-scaffold_334-1491911889:347098..348259Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1510915933:347098..348259TCONS_00060107-exon-scaffold_334-1510915933:347098..348259Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1575043694:347098..348259TCONS_00060107-exon-scaffold_334-1575043694:347098..348259Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1491911889:348644..348706TCONS_00060107-exon-scaffold_334-1491911889:348644..348706Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1510915933:348644..348706TCONS_00060107-exon-scaffold_334-1510915933:348644..348706Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1575043694:348644..348706TCONS_00060107-exon-scaffold_334-1575043694:348644..348706Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1491911889:368820..369069TCONS_00060107-exon-scaffold_334-1491911889:368820..369069Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1510915933:368820..369069TCONS_00060107-exon-scaffold_334-1510915933:368820..369069Clytia hemisphaericaexon
TCONS_00060107-exon-scaffold_334-1575043694:368820..369069TCONS_00060107-exon-scaffold_334-1575043694:368820..369069Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060107-proteinTCONS_00060107-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_334supercontigscaffold_334:346994..369069 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.181627	0	0.171373	0.0670645	0	0.74751	0	0.677188	3.29249e-08	1.72724	2.30015	0.640616	0.684501	0	0.0515668	0.0184464	0.0810129	0	0.0860387	0.0900333	0	0	0.20825	0.220884	0.0145883	1.66538	0.18497	0.157924	0.299449	0.0684633
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060107 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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