TCONS_00060084 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060084
Unique NameTCONS_00060084
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060084 ID=TCONS_00060084|Name=TCONS_00060084|organism=Clytia hemisphaerica|type=transcript|length=167bp
CGGGAAAAGTGAGCGTAGGAGTTAGGTAAGCGTAGGAAGAAATTTTGTCG
GCGGCAAGGGCTGAGAAATCAGCAGCCTCTCACCAACTTTTGCTCGTTCT
CCTACGCAGCTCCTATTCTAGCAAacgcccgccgcctttatgttctcgcc
ctctgacatgattaatt
Run BLAST on NCBI

transcript from alignment at scaffold_333:333341..333507

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060084 ID=TCONS_00060084|Name=TCONS_00060084|organism=Clytia hemisphaerica|type=transcript|length=167bp|location=Sequence derived from alignment at scaffold_333:333341..333507 (Clytia hemisphaerica)
aattaatcatgtcagagggcgagaacataaaggcggcgggcgtTTGCTAG
AATAGGAGCTGCGTAGGAGAACGAGCAAAAGTTGGTGAGAGGCTGCTGAT
TTCTCAGCCCTTGCCGCCGACAAAATTTCTTCCTACGCTTACCTAACTCC
TACGCTCACTTTTCCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037799XLOC_037799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060084-exon-scaffold_333-1491911889:333341..333507TCONS_00060084-exon-scaffold_333-1491911889:333341..333507Clytia hemisphaericaexon
TCONS_00060084-exon-scaffold_333-1510915933:333341..333507TCONS_00060084-exon-scaffold_333-1510915933:333341..333507Clytia hemisphaericaexon
TCONS_00060084-exon-scaffold_333-1575043694:333341..333507TCONS_00060084-exon-scaffold_333-1575043694:333341..333507Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:333341..333507 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060084 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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