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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060017 ID=TCONS_00060017|Name=TCONS_00060017|organism=Clytia hemisphaerica|type=transcript|length=1043bp
AAGCGTTGCAACGATTCAAAAACTCTTCGATCAagcagaaaaaatcattt
ctcaACCAGACACGATCGGATCAAGTTTGAAAGTCAAAGCAGGAATCTCT
CAATTCAATAATCCAAATCCAACTCTACCACCATCACAAGCACCATCGGA
AAGCTCGGGCAATCTCTCTCAAAACATGATTGATAATGCTCACAAAAAGG
TTGAAGCCCATCGCTCAGAGTTGAATTCTCTTCGAATTCGcgctgaagaa
gaaaaaaagcgGTTTGATGCATCAGAACAAGCTTTAGCAGAAGAATTGAG
GAGATTGGAGAATTTCAAAAGTGAAGATGCTACAAGTAAACGAATGATCG
AGGTCTTGAACCAGGGATTAGATGCATTGAATAAAGTCAAACANGAACAA
GCTTTAGCAGAAGAATTGAGGAGATTGGAGAATTTCAAAAGTGAAGATGC
TACAAGTAAACGAATGATCGAAGTCTTGAACCAGGGATTAGATGCATTGA
ATAAAGTCAAACAAAAGTGGGTGGATCTTCTTCAATTCTTTACGTCACTG
TCTAACTTGATCAATTCAACACTGGCTCCCTCATTGAATATGTTTGTTGC
TGACGCAGAGAAAGTCGCTCAGTCCGAAAGAGTAACTAACATGGCAAAGG
AGACTGTCTACCAAACAGCTTATCAAGCAGTCAAGGTCAACCATGTCGTC
AAACATCTTGCTGGCTCgtataaagaaatttcaaagaaatatcTCATGCC
GTTGTGTTTAAAGTTGGATGAAATCCTTATTTTAGATGCTAATCATAATA
AAGCAAAGCTCGAAAAATTGAGATTGGAACTGGGCGCAGAATGCAGAAAA
GCTCAGGAAGACATCAAGAGAATCGTAGACAAGCATCACGAGGAGTTTCT
TGCAAACTGCCACAAGAAAACATCAGCAATCGATACAGAGATGAGGGCAA
TTGCACCTATTAccgaagaaaagaagaaacagaTCCAAACAAATGCACAA
AAGATGGTAAAAGGAGAAGAACTTGATTTGGGATTTTAAATTC Run BLAST on NCBI transcript from alignment at scaffold_333:414494..415536+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060017 ID=TCONS_00060017|Name=TCONS_00060017|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at scaffold_333:414494..415536+ (Clytia hemisphaerica)
AAGCGTTGCAACGATTCAAAAACTCTTCGATCAagcagaaaaaatcattt
ctcaACCAGACACGATCGGATCAAGTTTGAAAGTCAAAGCAGGAATCTCT
CAATTCAATAATCCAAATCCAACTCTACCACCATCACAAGCACCATCGGA
AAGCTCGGGCAATCTCTCTCAAAACATGATTGATAATGCTCACAAAAAGG
TTGAAGCCCATCGCTCAGAGTTGAATTCTCTTCGAATTCGcgctgaagaa
gaaaaaaagcgGTTTGATGCATCAGAACAAGCTTTAGCAGAAGAATTGAG
GAGATTGGAGAATTTCAAAAGTGAAGATGCTACAAGTAAACGAATGATCG
AGGTCTTGAACCAGGGATTAGATGCATTGAATAAAGTCAAACANGAACAA
GCTTTAGCAGAAGAATTGAGGAGATTGGAGAATTTCAAAAGTGAAGATGC
TACAAGTAAACGAATGATCGAAGTCTTGAACCAGGGATTAGATGCATTGA
ATAAAGTCAAACAAAAGTGGGTGGATCTTCTTCAATTCTTTACGTCACTG
TCTAACTTGATCAATTCAACACTGGCTCCCTCATTGAATATGTTTGTTGC
TGACGCAGAGAAAGTCGCTCAGTCCGAAAGAGTAACTAACATGGCAAAGG
AGACTGTCTACCAAACAGCTTATCAAGCAGTCAAGGTCAACCATGTCGTC
AAACATCTTGCTGGCTCgtataaagaaatttcaaagaaatatcTCATGCC
GTTGTGTTTAAAGTTGGATGAAATCCTTATTTTAGATGCTAATCATAATA
AAGCAAAGCTCGAAAAATTGAGATTGGAACTGGGCGCAGAATGCAGAAAA
GCTCAGGAAGACATCAAGAGAATCGTAGACAAGCATCACGAGGAGTTTCT
TGCAAACTGCCACAAGAAAACATCAGCAATCGATACAGAGATGAGGGCAA
TTGCACCTATTAccgaagaaaagaagaaacagaTCCAAACAAATGCACAA
AAGATGGTAAAAGGAGAAGAACTTGATTTGGGATTTTAAATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060017-exon-scaffold_333-1491911889:414494..415536 | TCONS_00060017-exon-scaffold_333-1491911889:414494..415536 | Clytia hemisphaerica | exon |
| TCONS_00060017-exon-scaffold_333-1510915933:414494..415536 | TCONS_00060017-exon-scaffold_333-1510915933:414494..415536 | Clytia hemisphaerica | exon |
| TCONS_00060017-exon-scaffold_333-1575043694:414494..415536 | TCONS_00060017-exon-scaffold_333-1575043694:414494..415536 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_333 | supercontig | scaffold_333:414494..415536 + |
Blast
The following BLAST results are available for this feature:
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