TCONS_00059995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059995
Unique NameTCONS_00059995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059995 ID=TCONS_00059995|Name=TCONS_00059995|organism=Clytia hemisphaerica|type=transcript|length=295bp
aaaatatcaagctaaagaaaatctcaaacaaaagaaacattaAAGCAAAA
TAGTAACATAACATAACAAAATGAATAGGTTAAAGGTTTATTTAGTTATT
ATTGTCCATGCATTTGATTCGTCGACCTCAGGTGCTGCCCTTCTACTGAA
AGGCCCCATCTTGCGTATAACAGTTTGTCTTCGCGCTTTTGTCGATCGCt
ttgtcattgtctttttatCCAACGCTTCAAAGTACTTATCACATTTTTGC
GAACGCCATCTCAGTGGTTGAACCTCGAGTCCTCCTTTTCATCTT
Run BLAST on NCBI

transcript from alignment at scaffold_331:1315509..1315803

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059995 ID=TCONS_00059995|Name=TCONS_00059995|organism=Clytia hemisphaerica|type=transcript|length=295bp|location=Sequence derived from alignment at scaffold_331:1315509..1315803 (Clytia hemisphaerica)
AAGATGAAAAGGAGGACTCGAGGTTCAACCACTGAGATGGCGTTCGCAAA
AATGTGATAAGTACTTTGAAGCGTTGGataaaaagacaatgacaaaGCGA
TCGACAAAAGCGCGAAGACAAACTGTTATACGCAAGATGGGGCCTTTCAG
TAGAAGGGCAGCACCTGAGGTCGACGAATCAAATGCATGGACAATAATAA
CTAAATAAACCTTTAACCTATTCATTTTGTTATGTTATGTTACTATTTTG
CTTtaatgtttcttttgtttgagattttctttagcttgatatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037751XLOC_037751Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059995-exon-scaffold_331-1491911889:1315509..1315803TCONS_00059995-exon-scaffold_331-1491911889:1315509..1315803Clytia hemisphaericaexon
TCONS_00059995-exon-scaffold_331-1510915933:1315509..1315803TCONS_00059995-exon-scaffold_331-1510915933:1315509..1315803Clytia hemisphaericaexon
TCONS_00059995-exon-scaffold_331-1575043694:1315509..1315803TCONS_00059995-exon-scaffold_331-1575043694:1315509..1315803Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:1315509..1315803 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.40277	1.05793	0	0	1.66191	0.798158	0	0	4.71441	10.6035	5.24509	3.5358	3.13426	3.26029	3.05169	4.81824	6.30161	7.66515	4.5651	2.65079	5.98515	9.3653	2.2055	5.89663	0	0.459006	12.6719	12.6145	2.81861	3.07128
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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