TCONS_00059970 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059970
Unique NameTCONS_00059970
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059970 ID=TCONS_00059970|Name=TCONS_00059970|organism=Clytia hemisphaerica|type=transcript|length=171bp
attgttaaaCCCCGGGATGTCCAAGCCCTATTTTTCTCCAACCCCTTGGA
TTTCCAGGTTAAATTTTTCCCCATCCTCTAGGACGTCTCTTGTGAAAAGA
AATAACATTACCCCCTGGAtgtccgatatcctcaacatggGGGATACGGA
GTTCATCTGGAAAATCCCAAT
Run BLAST on NCBI

transcript from alignment at scaffold_331:814037..814207

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059970 ID=TCONS_00059970|Name=TCONS_00059970|organism=Clytia hemisphaerica|type=transcript|length=171bp|location=Sequence derived from alignment at scaffold_331:814037..814207 (Clytia hemisphaerica)
ATTGGGATTTTCCAGATGAACTCCGTATCCCccatgttgaggatatcgga
caTCCAGGGGGTAATGTTATTTCTTTTCACAAGAGACGTCCTAGAGGATG
GGGAAAAATTTAACCTGGAAATCCAAGGGGTTGGAGAAAAATAGGGCTTG
GACATCCCGGGGtttaacaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037726XLOC_037726Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059970-exon-scaffold_331-1491911889:814037..814207TCONS_00059970-exon-scaffold_331-1491911889:814037..814207Clytia hemisphaericaexon
TCONS_00059970-exon-scaffold_331-1510915933:814037..814207TCONS_00059970-exon-scaffold_331-1510915933:814037..814207Clytia hemisphaericaexon
TCONS_00059970-exon-scaffold_331-1575043694:814037..814207TCONS_00059970-exon-scaffold_331-1575043694:814037..814207Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:814037..814207 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059970 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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