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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059965 ID=TCONS_00059965|Name=TCONS_00059965|organism=Clytia hemisphaerica|type=transcript|length=1222bp
ACTCTTTGGCGGATATGGGGGTCGTTAACGACCCCCCATTAAATTATTGA
GAAAAACAGAGTTTCTAGGCTATAAAAACCCGTGATTTTTATATGTACAG
GTGTCCTTATGCTATTAGAGACGGAAAAGTCTCAGTTGAATGATCATAGA
CCCGTGTGCCAATAGTAATATGTAGGCTGACAAGctgcaaaataaaaaca
ttgaaatattcaatttcaagcAGCCACACTGGTTGACTTTAAAGAAGATT
TGAGCAGATTCAACTGGTTTTTATGGTCGAAATCAATGCAGAATGAACTT
TTATAGTTTGTGTAATGttttggcttcaaattatttgtAAAGAGTAACTC
ATTCTATCACACAATATCCATGGGGGTTGAATTGGTATACGTGTCCACAC
GCCCACATTTTTGTCAGATGAAATGACATTAGTAACATGTCTCATAATCC
AGTTTTCAAGCCACAACAAGGCTAACTAAATCTTATTTGTATAATTCTGA
AAGAACACTCAATTTGCATACAAAGTGGCTCTCATTGGACATTGGACCCA
AGCTCTTGTGGTGTGGTTCAAAGTTTTCGTATATAATTCAACATTTTGTG
ACGACAAAGACCAGGCTGCACAAGCCGTCTCCATGACCATATAAATGACT
AGCACTTGGATTTATCACTGATTTACTTGCTCAAATCACATACAATGGCC
TTTGTTTACAACACAAAGGTCATTTGACCAATTTCATCTCGTGGACATTT
CTGATTTTCAAGTTACCGCATGACACCCTGAATGGACGTAGCATAGCTCA
CGTTATTGCCGTACatggttaaaatttgaaaatggacaTATTAACTGGCC
AATTCCTAGCAAGAAGACATCATTAAATATACTTAGAATGTCTAGTTTCA
TGATTTTGAACCCTTGAAATAGACTCATAAGAAGAATTTCATGTCATGAA
ACTGATAGTAgatttattacaattttataCCATTTTCTGTCATTTTACGC
GTTCACcgaaatatcaatattttcattttttgtaaagCCTTAGGTCTAAA
ATTTTCAGCATTTGATTATAttgtatataagaacatttgtaCAAAGTTTT
AGAGGAAACTAACAGTTATTTTGGATTTTATgatgatttttgtgaaaaaa
aaatatttttacgtaaaaatttattttttattttcaaacttgaaatccct
gctgacgtcagcaaaataaaaa Run BLAST on NCBI transcript from alignment at scaffold_331:710625..711846 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059965 ID=TCONS_00059965|Name=TCONS_00059965|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_331:710625..711846 (Clytia hemisphaerica)
tttttattttgctgacgtcagcagggatttcaagtttgaaaataaaaaat
aaatttttacgtaaaaatatttttttttcacaaaaatcatcATAAAATCC
AAAATAACTGTTAGTTTCCTCTAAAACTTTGtacaaatgttcttatatac
aaTATAATCAAATGCTGAAAATTTTAGACCTAAGGctttacaaaaaatga
aaatattgatatttcgGTGAACGCGTAAAATGACAGAAAATGGtataaaa
ttgtaataaatcTACTATCAGTTTCATGACATGAAATTCTTCTTATGAGT
CTATTTCAAGGGTTCAAAATCATGAAACTAGACATTCTAAGTATATTTAA
TGATGTCTTCTTGCTAGGAATTGGCCAGTTAATAtgtccattttcaaatt
ttaaccatGTACGGCAATAACGTGAGCTATGCTACGTCCATTCAGGGTGT
CATGCGGTAACTTGAAAATCAGAAATGTCCACGAGATGAAATTGGTCAAA
TGACCTTTGTGTTGTAAACAAAGGCCATTGTATGTGATTTGAGCAAGTAA
ATCAGTGATAAATCCAAGTGCTAGTCATTTATATGGTCATGGAGACGGCT
TGTGCAGCCTGGTCTTTGTCGTCACAAAATGTTGAATTATATACGAAAAC
TTTGAACCACACCACAAGAGCTTGGGTCCAATGTCCAATGAGAGCCACTT
TGTATGCAAATTGAGTGTTCTTTCAGAATTATACAAATAAGATTTAGTTA
GCCTTGTTGTGGCTTGAAAACTGGATTATGAGACATGTTACTAATGTCAT
TTCATCTGACAAAAATGTGGGCGTGTGGACACGTATACCAATTCAACCCC
CATGGATATTGTGTGATAGAATGAGTTACTCTTTacaaataatttgaagc
caaaaCATTACACAAACTATAAAAGTTCATTCTGCATTGATTTCGACCAT
AAAAACCAGTTGAATCTGCTCAAATCTTCTTTAAAGTCAACCAGTGTGGC
TgcttgaaattgaatatttcaatgtttttattttgcagCTTGTCAGCCTA
CATATTACTATTGGCACACGGGTCTATGATCATTCAACTGAGACTTTTCC
GTCTCTAATAGCATAAGGACACCTGTACATATAAAAATCACGGGTTTTTA
TAGCCTAGAAACTCTGTTTTTCTCAATAATTTAATGGGGGGTCGTTAACG
ACCCCCATATCCGCCAAAGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059965-exon-scaffold_331-1491911889:710625..711846 | TCONS_00059965-exon-scaffold_331-1491911889:710625..711846 | Clytia hemisphaerica | exon |
| TCONS_00059965-exon-scaffold_331-1510915933:710625..711846 | TCONS_00059965-exon-scaffold_331-1510915933:710625..711846 | Clytia hemisphaerica | exon |
| TCONS_00059965-exon-scaffold_331-1575043694:710625..711846 | TCONS_00059965-exon-scaffold_331-1575043694:710625..711846 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:710625..711846 . |
Blast
The following BLAST results are available for this feature:
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